Pregenerated sensors for KTI12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073775Ensembl transcript IDs: ENSMUST00000102738.4
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTACCACTCAATGCCTCAGCTTATGCTAACTACACACTCAGGGTATaGCAGTGGCAGTTAAGAAAACGAGTCAAAACTTGGCCATCTTAC | + |
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Preference number: 1 (lower is better) Translates to: LPLNASAYANYTLRV*QWQLRKRVKTWPSY Trigger: GTAAGATGGCCAAGTTTTGACTCGTTTTCTTAACTGCCACTGCCATACCCTGAGTGTGTAGTTAGCATAAGCTGAGGCATTGAGTGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| 3UTR GCA 90 bp | GTTTCCCAGGGACAGAACAAAAGATATATATATCTGTGTTCCAAGTaGCAGGTCAGAAGCAAGAGGCTCTGTGCTCAAAAGTACTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: VSQGQNKRYIYLCSK*QVRSKRLCAQKYLE Trigger: CTCCAAGTACTTTTGAGCACAGAGCCTCTTGCTTCTGACCTGGCACTTGGAACACAGATATATATATCTTTTGTTCTGTCCCTGGGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| 3UTR CCA 90 bp | ACACTCAGGGTATGGCAGTGGCAGTTAAGAAAACGAGTCAAAACTTaGCCATCTTACTACAGTATGCTTTGCAGACCTTCGGACTATTCT | + |
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Preference number: 1 (lower is better) Translates to: TLRVWQWQLRKRVKT*PSYYSMLCRPSDYS Trigger: AGAATAGTCCGAAGGTCTGCAAAGCATACTGTAGTAAGATGGCCAAGTTTTGACTCGTTTTCTTAACTGCCACTGCCATACCCTGAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| 3UTR CAA 90 bp | CACACTCAGGGTATGGCAGTGGCAGTTAAGAAAACGAGTCAAAACTaGGCCATCTTACTACAGTATGCTTTGCAGACCTTCGGACTATTC | + |
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Preference number: 2 (lower is better) Translates to: HTQGMAVAVKKTSQN*AILLQYALQTFGLF Trigger: GAATAGTCCGAAGGTCTGCAAAGCATACTGTAGTAAGATGGCCAAGTTTTGACTCGTTTTCTTAACTGCCACTGCCATACCCTGAGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGGACAGAACAAAAGATATATATATCTGTGTTCCAAGTGCCAGGTCAGAAGCTACACACTCAGGGTATaGCAGTGGCAGTTAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: QGQNKRYIYLCSKCQVRSYTLRV*QWQLRK Trigger: TTTTCTTAACTGCCACTGCCATACCCTGAGTGTGTA...GCTTCTGACCTGGCACTTGGAACACAGATATATATATCTTTTGTTCTGTCCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| 3UTR-3UTR GCA 90 bp | CAGGGACAGAACAAAAGATATATATATCTGTGTTCCAAGTGCCAGGTCAGAAGCTACTACAGTATGCTTTaGAGACCTTCGGACTATTCT | + |
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Preference number: 2 (lower is better) Translates to: QGQNKRYIYLCSKCQVRSYYSML*RPSDYS Trigger: AGAATAGTCCGAAGGTCTGCAAAGCATACTGTAGTA...GCTTCTGACCTGGCACTTGGAACACAGATATATATATCTTTTGTTCTGTCCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| 3UTR CCA 72 bp | GTATGGCAGTGGCAGTTAAGAAAACGAGTCAAAACTTaGCCATCTTACTACAGTATGCTTTGCAGACCTTCG | + |
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Preference number: 3 (lower is better) Translates to: VWQWQLRKRVKT*PSYYSMLCRPS Trigger: CGAAGGTCTGCAAAGCATACTGTAGTAAGATGGCCAAGTTTTGACTCGTTTTCTTAACTGCCACTGCCATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| 3UTR CCA 72 bp | TCAGCTTATGCTAACTACACACTCAGGGTATGGCAGTaGCAGTTAAGAAAACGAGTCAAAACTTGGCCATCT | + |
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Preference number: 3 (lower is better) Translates to: SAYANYTLRVWQ*QLRKRVKTWPS Trigger: AGATGGCCAAGTTTTGACTCGTTTTCTTAACTGCCACTGCCATACCCTGAGTGTGTAGTTAGCATAAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| 3UTR CCA 72 bp | AATGCCTCAGCTTATGCTAACTACACACTCAGGGTATaGCAGTGGCAGTTAAGAAAACGAGTCAAAACTTGG | + |
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Preference number: 3 (lower is better) Translates to: NASAYANYTLRV*QWQLRKRVKTW Trigger: CCAAGTTTTGACTCGTTTTCTTAACTGCCACTGCCATACCCTGAGTGTGTAGTTAGCATAAGCTGAGGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| 3UTR GCA 72 bp | GGACAGAACAAAAGATATATATATCTGTGTTCCAAGTaGCAGGTCAGAAGCAAGAGGCTCTGTGCTCAAAAG | + |
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Preference number: 3 (lower is better) Translates to: GQNKRYIYLCSK*QVRSKRLCAQK Trigger: CTTTTGAGCACAGAGCCTCTTGCTTCTGACCTGGCACTTGGAACACAGATATATATATCTTTTGTTCTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| 3UTR TCA 72 bp | AAGCAAGAGGCTCTGTGCTCAAAAGTACTTGGAGTATaGAAAGGCCATTATGAATACAAAACTGTTATCTTC | + |
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Preference number: 3 (lower is better) Translates to: KQEALCSKVLGV*KGHYEYKTVIF Trigger: GAAGATAACAGTTTTGTATTCATAATGGCCTTTTCATACTCCAAGTACTTTTGAGCACAGAGCCTCTTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| 3UTR-3UTR CAA 90 bp | AATATCAGTTTCCCAGGGACAGAACAAAAGATATATATATCTGTGTTCCAAGTGTGTGCTCAAAAGTACTaGGAGTATGAAAAGGCCATT | + |
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Preference number: 3 (lower is better) Translates to: NISFPGTEQKIYISVFQVCAQKY*EYEKAI Trigger: AATGGCCTTTTCATACTCCAAGTACTTTTGAGCACA...CACTTGGAACACAGATATATATATCTTTTGTTCTGTCCCTGGGAAACTGATATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS-3UTR GCA 90 bp | AACTACACACTCAGGGTATGGCAGTGGCAGTTAAGAAAACGAGTCAAAACTTGGAGGATGACCACGTCCTaGCGGCTCAGGCGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NYTLRVWQWQLRKRVKTWRMTTS*RLRRRS Trigger: GGAGCGGCGCCTGAGCCGGCAGGACGTGGTCATCCT...CCAAGTTTTGACTCGTTTTCTTAACTGCCACTGCCATACCCTGAGTGTGTAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS-3UTR CCA 90 bp | CAGGTCAGAAGCAAGAGGCTCTGTGCTCAAAAGTACTTGGAGTATGAAAAGGCCGGCACAGCGCTCTTCTaGGCTTCCATCACAGCGGTC | + |
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Preference number: 4 (lower is better) Translates to: QVRSKRLCAQKYLEYEKAGTALF*ASITAV Trigger: GACCGCTGTGATGGAAGCCCAGAAGAGCGCTGTGCC...GGCCTTTTCATACTCCAAGTACTTTTGAGCACAGAGCCTCTTGCTTCTGACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS-3UTR CCA 90 bp | CAAAAGATATATATATCTGTGTTCCAAGTGCCAGGTCAGAAGCAAGAGGCTCTGGCTGGCTCTTGCCGCTaGACGGCAGCCCGCAAACCA | + |
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Preference number: 4 (lower is better) Translates to: QKIYISVFQVPGQKQEALAGSCR*TAARKP Trigger: TGGTTTGCGGGCTGCCGTCCAGCGGCAAGAGCCAGC...CAGAGCCTCTTGCTTCTGACCTGGCACTTGGAACACAGATATATATATCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS-3UTR GCA 90 bp | GAGTATGAAAAGGCCATTATGAATACAAAACTGTTATCTTCGGTTTCTACTCACCCGTCCGCTGGCTCTTaGCGCTGGACGGCAGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: EYEKAIMNTKLLSSVSTHPSAGS*RWTAAR Trigger: GCGGGCTGCCGTCCAGCGGCAAGAGCCAGCGGACGG...GTGAGTAGAAACCGAAGATAACAGTTTTGTATTCATAATGGCCTTTTCATACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS-3UTR TCA 90 bp | AGAACAAAAGATATATATATCTGTGTTCCAAGTGCCAGGTCAGAAGCAAGAGGCTCACCGAGTCCAGGATaGCCACGTCCTGCCGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RTKDIYICVPSARSEARGSPSPG*PRPAGS Trigger: TGAGCCGGCAGGACGTGGTCATCCTGGACTCGGTGA...GCCTCTTGCTTCTGACCTGGCACTTGGAACACAGATATATATATCTTTTGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS-3UTR CCA 90 bp | AGAACAAAAGATATATATATCTGTGTTCCAAGTGCCAGGTCAGAAGCAAGAGGCTCAACACCTGGCTTGTaGCCTGATCCAACTGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RTKDIYICVPSARSEARGSTPGL*PDPTGA Trigger: TGCACCAGTTGGATCAGGCCACAAGCCAGGTGTTGA...GCCTCTTGCTTCTGACCTGGCACTTGGAACACAGATATATATATCTTTTGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS-3UTR CCA 90 bp | CAGGTCAGAAGCAAGAGGCTCTGTGCTCAAAAGTACTTGGAGTATGAAAAGGCCGCAGATTCTCGTTATTaGGATGCATTTTGGTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: QVRSKRLCAQKYLEYEKAADSRY*DAFWCR Trigger: CCTACACCAAAATGCATCCCAATAACGAGAATCTGC...GGCCTTTTCATACTCCAAGTACTTTTGAGCACAGAGCCTCTTGCTTCTGACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS-3UTR TCA 90 bp | AGGCTCTGTGCTCAAAAGTACTTGGAGTATGAAAAGGCCATTATGAATACAAAAACCTGGCTTGTGGCCTaGTCCAACTGGTGCAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: RLCAQKYLEYEKAIMNTKTWLVA*SNWCRK Trigger: CTTTCTGCACCAGTTGGATCAGGCCACAAGCCAGGT...TTTTGTATTCATAATGGCCTTTTCATACTCCAAGTACTTTTGAGCACAGAGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS-3UTR CCA 90 bp | CAGGTCAGAAGCAAGAGGCTCTGTGCTCAAAAGTACTTGGAGTATGAAAAGGCCACTGAAGAAACATGTTaGCCAATTGAGGCAGATTCT | + |
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Preference number: 4 (lower is better) Translates to: QVRSKRLCAQKYLEYEKATEETC*PIEADS Trigger: AGAATCTGCCTCAATTGGCCAACATGTTTCTTCAGT...GGCCTTTTCATACTCCAAGTACTTTTGAGCACAGAGCCTCTTGCTTCTGACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS-3UTR TCA 90 bp | CAGGGACAGAACAAAAGATATATATATCTGTGTTCCAAGTGCCAGGTCAGAAGCCTCTGGTTCAGATACTaGAGAAACATGTTGGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: QGQNKRYIYLCSKCQVRSLWFRY*RNMLAN Trigger: ATTGGCCAACATGTTTCTTCAGTATCTGAACCAGAG...GCTTCTGACCTGGCACTTGGAACACAGATATATATATCTTTTGTTCTGTCCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS-3UTR TCA 90 bp | AATATCAGTTTCCCAGGGACAGAACAAAAGATATATATATCTGTGTTCCAAGTGAACATGTTGGCCAATTaGGGCAGATTCTCGTTATTG | + |
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Preference number: 4 (lower is better) Translates to: NISFPGTEQKIYISVFQVNMLAN*GRFSLL Trigger: CAATAACGAGAATCTGCCTCAATTGGCCAACATGTT...CACTTGGAACACAGATATATATATCTTTTGTTCTGTCCCTGGGAAACTGATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS CCA 90 bp | GCGCGGCCCTCGCTGGCCAGCGCCCGACGGAGCTCCTCCGTCCGCTaGCTCTTGCCGCTGGACGGCAGCCCGCAAACCACGACGAGCGGC | + |
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Preference number: 5 (lower is better) Translates to: ARPSLASARRSSSVR*LLPLDGSPQTTTSG Trigger: GCCGCTCGTCGTGGTTTGCGGGCTGCCGTCCAGCGGCAAGAGCCAGCGGACGGAGGAGCTCCGTCGGGCGCTGGCCAGCGAGGGCCGCGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS CCA 90 bp | CCAGCACCGAAGCATCGTCCACCACATACACCGCGCGGCCCTCGCTaGCCAGCGCCCGACGGAGCTCCTCCGTCCGCTGGCTCTTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: PAPKHRPPHTPRGPR*PAPDGAPPSAGSCR Trigger: GCGGCAAGAGCCAGCGGACGGAGGAGCTCCGTCGGGCGCTGGCCAGCGAGGGCCGCGCGGTGTATGTGGTGGACGATGCTTCGGTGCTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS GCA 90 bp | GGCTCGGCCAGTTCGGCCGCACGCAGTAAAGTAAGCAGAGCGGCGTaGGCGCGGCCCGGGCGAGGCAGTACAGCTCGTAGCGGAAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: GSASSAARSKVSRAA*ARPGRGSTARSGSP Trigger: AGGGCTTCCGCTACGAGCTGTACTGCCTCGCCCGGGCCGCGCGCACGCCGCTCTGCTTACTTTACTGCGTGCGGCCGAACTGGCCGAGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS GCA 90 bp | CGCAGAGCCTTCTCACCAGCGGAGTCGCCGTACACAGTCGGGTCCTaGGCGCCCAGCACCGAAGCATCGTCCACCACATACACCGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: RRAFSPAESPYTVGS*APSTEASSTTYTAR Trigger: CCGCGCGGTGTATGTGGTGGACGATGCTTCGGTGCTGGGCGCGCAGGACCCGACTGTGTACGGCGACTCCGCTGGTGAGAAGGCTCTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS CCA 90 bp | CAGCGCTCTTCTGGGCTTCCATCACAGCGGTCAACACCTGGCTTGTaGCCTGATCCAACTGGTGCAGAAAGCTGCCAGAGGCTAGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: QRSSGLPSQRSTPGL*PDPTGAESCQRLEA Trigger: AGCCTCTAGCCTCTGGCAGCTTTCTGCACCAGTTGGATCAGGCCACAAGCCAGGTGTTGACCGCTGTGATGGAAGCCCAGAAGAGCGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS-3UTR CAA 90 bp | AACTACACACTCAGGGTATGGCAGTGGCAGTTAAGAAAACGAGTCAAAACTTGGTCCGTCCGCTGGCTCTaGCCGCTGGACGGCAGCCCG | + |
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Preference number: 5 (lower is better) Translates to: NYTLRVWQWQLRKRVKTWSVRWL*PLDGSP Trigger: CGGGCTGCCGTCCAGCGGCAAGAGCCAGCGGACGGA...CCAAGTTTTGACTCGTTTTCTTAACTGCCACTGCCATACCCTGAGTGTGTAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS-3UTR CAA 90 bp | AGGCTCTGTGCTCAAAAGTACTTGGAGTATGAAAAGGCCATTATGAATACAAAATTACAGCGGAAGGGTTaGATGGCAGGATTTCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: RLCAQKYLEYEKAIMNTKLQRKG*MAGFPL Trigger: CAGAGGAAATCCTGCCATCAAACCCTTCCGCTGTAA...TTTTGTATTCATAATGGCCTTTTCATACTCCAAGTACTTTTGAGCACAGAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS TCA 72 bp | CTGGTGGCGCGCTGTTCCTCCACAGCGCCAGCCGCCTaGGACTTCCCGCCGGTCTCGGCCCGCGGTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LVARCSSTAPAA*DFPPVSARGLQ Trigger: CTGGAGACCGCGGGCCGAGACCGGCGGGAAGTCTCAGGCGGCTGGCGCTGTGGAGGAACAGCGCGCCACCAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS GCA 72 bp | CCAGCGCCCGACGGAGCTCCTCCGTCCGCTGGCTCTTaGCGCTGGACGGCAGCCCGCAAACCACGACGAGCG | + |
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Preference number: 6 (lower is better) Translates to: PAPDGAPPSAGS*RWTAARKPRRA Trigger: CGCTCGTCGTGGTTTGCGGGCTGCCGTCCAGCGGCAAGAGCCAGCGGACGGAGGAGCTCCGTCGGGCGCTGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS CCA 72 bp | TCGCTGGCCAGCGCCCGACGGAGCTCCTCCGTCCGCTaGCTCTTGCCGCTGGACGGCAGCCCGCAAACCACG | + |
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Preference number: 6 (lower is better) Translates to: SLASARRSSSVR*LLPLDGSPQTT Trigger: CGTGGTTTGCGGGCTGCCGTCCAGCGGCAAGAGCCAGCGGACGGAGGAGCTCCGTCGGGCGCTGGCCAGCGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS CAA 72 bp | GCCAGCGCCCGACGGAGCTCCTCCGTCCGCTGGCTCTaGCCGCTGGACGGCAGCCCGCAAACCACGACGAGC | + |
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Preference number: 6 (lower is better) Translates to: ASARRSSSVRWL*PLDGSPQTTTS Trigger: GCTCGTCGTGGTTTGCGGGCTGCCGTCCAGCGGCAAGAGCCAGCGGACGGAGGAGCTCCGTCGGGCGCTGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS TCA 72 bp | TCCCGCCGGTCTCGGCCCGCGGTCTCCAGCTCACGCTaGCAGCCAGGTCCCGGTTCTCGGAGGCGGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SRRSRPAVSSSR*QPGPGSRRRKP Trigger: AGGCTTCCGCCTCCGAGAACCGGGACCTGGCTGTCAGCGTGAGCTGGAGACCGCGGGCCGAGACCGGCGGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS CCA 72 bp | AAGCATCGTCCACCACATACACCGCGCGGCCCTCGCTaGCCAGCGCCCGACGGAGCTCCTCCGTCCGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: KHRPPHTPRGPR*PAPDGAPPSAG Trigger: GCCAGCGGACGGAGGAGCTCCGTCGGGCGCTGGCCAGCGAGGGCCGCGCGGTGTATGTGGTGGACGATGCTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS GCA 72 bp | AGTTCGGCCGCACGCAGTAAAGTAAGCAGAGCGGCGTaGGCGCGGCCCGGGCGAGGCAGTACAGCTCGTAGC | + |
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Preference number: 6 (lower is better) Translates to: SSAARSKVSRAA*ARPGRGSTARS Trigger: GCTACGAGCTGTACTGCCTCGCCCGGGCCGCGCGCACGCCGCTCTGCTTACTTTACTGCGTGCGGCCGAACT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS GCA 72 bp | TTCTCACCAGCGGAGTCGCCGTACACAGTCGGGTCCTaGGCGCCCAGCACCGAAGCATCGTCCACCACATAC | + |
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Preference number: 6 (lower is better) Translates to: FSPAESPYTVGS*APSTEASSTTY Trigger: GTATGTGGTGGACGATGCTTCGGTGCTGGGCGCGCAGGACCCGACTGTGTACGGCGACTCCGCTGGTGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS CAA 90 bp | CAGCGGAAGGGTTTGATGGCAGGATTTCCTCTGGATCCAGTTCCTTaGAGACAGCGGCCAGAACTCCCCCGTTGGCTACGGGGCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: QRKGLMAGFPLDPVP*RQRPELPRWLRGWW Trigger: CCACCAGCCCCGTAGCCAACGGGGGAGTTCTGGCCGCTGTCTCAAAGGAACTGGATCCAGAGGAAATCCTGCCATCAAACCCTTCCGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS CCA 72 bp | GGGAGCTTTAGGAAGTCTCCGGGCACAGCGCTCTTCTaGGCTTCCATCACAGCGGTCAACACCTGGCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: GSFRKSPGTALF*ASITAVNTWLV Trigger: CACAAGCCAGGTGTTGACCGCTGTGATGGAAGCCCAGAAGAGCGCTGTGCCCGGAGACTTCCTAAAGCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS CAA 90 bp | GCACAGCGCTCTTCTGGGCTTCCATCACAGCGGTCAACACCTGGCTaGTGGCCTGATCCAACTGGTGCAGAAAGCTGCCAGAGGCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: AQRSSGLPSQRSTPG*WPDPTGAESCQRLE Trigger: CTCTAGCCTCTGGCAGCTTTCTGCACCAGTTGGATCAGGCCACAAGCCAGGTGTTGACCGCTGTGATGGAAGCCCAGAAGAGCGCTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS CCA 72 bp | TCTGGGCTTCCATCACAGCGGTCAACACCTGGCTTGTaGCCTGATCCAACTGGTGCAGAAAGCTGCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: SGLPSQRSTPGL*PDPTGAESCQR Trigger: CCTCTGGCAGCTTTCTGCACCAGTTGGATCAGGCCACAAGCCAGGTGTTGACCGCTGTGATGGAAGCCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS TCA 72 bp | GCTTCCATCACAGCGGTCAACACCTGGCTTGTGGCCTaGTCCAACTGGTGCAGAAAGCTGCCAGAGGCTAGA | + |
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Preference number: 6 (lower is better) Translates to: ASITAVNTWLVA*SNWCRKLPEAR Trigger: TCTAGCCTCTGGCAGCTTTCTGCACCAGTTGGATCAGGCCACAAGCCAGGTGTTGACCGCTGTGATGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS CAA 72 bp | GGTTTGATGGCAGGATTTCCTCTGGATCCAGTTCCTTaGAGACAGCGGCCAGAACTCCCCCGTTGGCTACGG | + |
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Preference number: 6 (lower is better) Translates to: GLMAGFPLDPVP*RQRPELPRWLR Trigger: CCGTAGCCAACGGGGGAGTTCTGGCCGCTGTCTCAAAGGAACTGGATCCAGAGGAAATCCTGCCATCAAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS CAA 72 bp | TCTTCTGGGCTTCCATCACAGCGGTCAACACCTGGCTaGTGGCCTGATCCAACTGGTGCAGAAAGCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSGLPSQRSTPG*WPDPTGAESCQ Trigger: CTGGCAGCTTTCTGCACCAGTTGGATCAGGCCACAAGCCAGGTGTTGACCGCTGTGATGGAAGCCCAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS CCA 72 bp | AGTGCAAACTCTGGTTCAGATACTGAAGAAACATGTTaGCCAATTGAGGCAGATTCTCGTTATTGGGATGCA | + |
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Preference number: 6 (lower is better) Translates to: SANSGSDTEETC*PIEADSRYWDA Trigger: TGCATCCCAATAACGAGAATCTGCCTCAATTGGCCAACATGTTTCTTCAGTATCTGAACCAGAGTTTGCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS CAA 72 bp | ACTCTGGTTCAGATACTGAAGAAACATGTTGGCCAATaGAGGCAGATTCTCGTTATTGGGATGCATTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: TLVQILKKHVGQ*RQILVIGMHFG Trigger: ACCAAAATGCATCCCAATAACGAGAATCTGCCTCAATTGGCCAACATGTTTCTTCAGTATCTGAACCAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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| CDS CAA 90 bp | TTAGTGCAAACTCTGGTTCAGATACTGAAGAAACATGTTGGCCAATaGAGGCAGATTCTCGTTATTGGGATGCATTTTGGTGTAGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: LVQTLVQILKKHVGQ*RQILVIGMHFGVGN Trigger: ATTTCCTACACCAAAATGCATCCCAATAACGAGAATCTGCCTCAATTGGCCAACATGTTTCTTCAGTATCTGAACCAGAGTTTGCACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102738.4 |
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