Pregenerated sensors for KRTCAP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029149Ensembl transcript IDs: ENSMUST00000054829.13, ENSMUST00000201625.4, ENSMUST00000201937.4
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGAAAACACCTGTGGACTaGGCCTCAGAAGAACACCTG | + |
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Preference number: 2 (lower is better) Translates to: NTSSFITIIYTTLGSGPPKTPVD*ASEEHL Trigger: CAGGTGTTCTTCTGAGGCGCAGTCCACAGGTGTTTT...CGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | TTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTCGCGCATCAGCCGCCTaGGCCCTCGGGCGGCATCGA | + |
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Preference number: 4 (lower is better) Translates to: FFYYNYLYHPRVRAPVRSRASAA*ALGRHR Trigger: TCGATGCCGCCCGAGGGCCCAGGCGGCTGATGCGCG...ACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | AGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTACGCGCATCAGCCGCCTaGGCCCTCGGGCGGCATCGA | + |
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Preference number: 4 (lower is better) Translates to: SSFITIIYTTLGSGPPCVRASAA*ALGRHR Trigger: TCGATGCCGCCCGAGGGCCCAGGCGGCTGATGCGCG...TACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | AAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTCGCGCATCAGCCGCCTaGGCCCTCGGGCGGCATCGA | + |
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Preference number: 4 (lower is better) Translates to: KFFYYNYLYHPRVRAPVRRASAA*ALGRHR Trigger: TCGATGCCGCCCGAGGGCCCAGGCGGCTGATGCGCG...ACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | TCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTACCGCGCCTCGGGGGTTaGCCACGTGCCGCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SFITIIYTTLGSGPPCVVPRLGG*PRAAEQ Trigger: CTGTTCTGCGGCACGTGGCCAACCCCCGAGGCGCGG...TACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR TCA 90 bp | TTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTAGAAAGGCCTGGAAGTCCTaGCGGCCATGGAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FYYNYLYHPRVRAPVRSRKAWKS*RPWSSC Trigger: GCAGCTGCTCCATGGCCGTCAGGACTTCCAGGCCTT...TCTACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR TCA 90 bp | TTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTAGAAAAGGCCTGGAAGTCCTaGCGGCCATGGAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FITIIYTTLGSGPPCVVEKAWKS*RPWSSC Trigger: GCAGCTGCTCCATGGCCGTCAGGACTTCCAGGCCTT...TTCTACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR TCA 90 bp | TTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTAAGGCCTGGAAGTCCTaGCGGCCATGGAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FFYYNYLYHPRVRAPVRSKAWKS*RPWSSC Trigger: GCAGCTGCTCCATGGCCGTCAGGACTTCCAGGCCTT...ACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR GCA 90 bp | TTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTAGACGGGGGTTGGCCACGTaGCGCAGAACAGTACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: FYYNYLYHPRVRAPVRSRRGLAT*RRTVPC Trigger: GCATGGTACTGTTCTGCGGCACGTGGCCAACCCCCG...TCTACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR GCA 90 bp | TCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTACGGGGGTTGGCCACGTaGCGCAGAACAGTACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SFITIIYTTLGSGPPCVVRGLAT*RRTVPC Trigger: GCATGGTACTGTTCTGCGGCACGTGGCCAACCCCCG...TACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | CAAAATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGCGCCTCGGGGGTTaGCCACGTGCCGCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: QNTSSFITIIYTTLGSGPPRLGG*PRAAEQ Trigger: CTGTTCTGCGGCACGTGGCCAACCCCCGAGGCGCGG...GGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | ACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGGCCCAGTGCAGTCGTaGGCGAAGAAGGTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSSFITIIYTTLGSGPPCGPVQS*AKKVPG Trigger: TCCAGGAACCTTCTTCGCCCACGACTGCACTGGGCC...GCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | TTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTAGACCAGGAGGAGGCCCATaGAGCAGGCAGCAGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FYYNYLYHPRVRAPVRSRPGGGP*SRQQTR Trigger: TCTTGTCTGCTGCCTGCTCCATGGGCCTCCTCCTGG...TCTACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | TACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGGGCCCAGTGCAGTCGTaGGCGAAGAAGGTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YKFFYYNYLYHPRVRAPVGPVQS*AKKVPG Trigger: TCCAGGAACCTTCTTCGCCCACGACTGCACTGGGCC...CACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR TCA 90 bp | ACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCCACCATTGGCAACAGTaGGCGATACAGCCAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSSFITIIYTTLGSGPPCHHWQQ*AIQPGG Trigger: TCCTCCTGGCTGTATCGCTCACTGTTGCCAATGGTG...GCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR TCA 90 bp | TTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTAGAACACCATTGGCAACAGTaGGCGATACAGCCAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FITIIYTTLGSGPPCVVEHHWQQ*AIQPGG Trigger: TCCTCCTGGCTGTATCGCTCACTGTTGCCAATGGTG...TTCTACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR TCA 90 bp | ACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCCAATTCCCCGTAGCGTaGGTGCAGCCACACAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSSFITIIYTTLGSGPPCQFPVA*VQPHNS Trigger: ACTGTTGTGTGGCTGCACTCACGCTACGGGGAATTG...GCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR GCA 90 bp | ACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCCGCAGAACAGTACCATaGAACACAGCTCCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSSFITIIYTTLGSGPPCRRTVP*NTAPTR Trigger: CCTGGTGGGAGCTGTGTTGCATGGTACTGTTCTGCG...GCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR GCA 90 bp | TTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTTCCTGCAGCTGTTCCTaGAACCCTTCCTTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FFYYNYLYHPRVRAPVRSSCSCS*NPSFLQ Trigger: CTGCAGGAAGGAAGGGTTGCAGGAACAGCTGCAGGA...ACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR GCA 90 bp | TTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTAGAATCCTGCAGCTGTTCCTaGAACCCTTCCTTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FITIIYTTLGSGPPCVVESCSCS*NPSFLQ Trigger: CTGCAGGAAGGAAGGGTTGCAGGAACAGCTGCAGGA...TTCTACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | TATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTAGAAAAGGCGAAGAAGGTTCCTaGATGCCAAGAGGGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: YYNYLYHPRVRAPVRSRKGEEGS*MPRGPQ Trigger: TTGTGGCCCTCTTGGCATCCAGGAACCTTCTTCGCC...TTTTCTACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | AGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGGCGAAGAAGGTTCCTaGATGCCAAGAGGGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SSFITIIYTTLGSGPPCVGEEGS*MPRGPQ Trigger: TTGTGGCCCTCTTGGCATCCAGGAACCTTCTTCGCC...TACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | TTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTGGCGAAGAAGGTTCCTaGATGCCAAGAGGGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: FFYYNYLYHPRVRAPVRSGEEGS*MPRGPQ Trigger: TTGTGGCCCTCTTGGCATCCAGGAACCTTCTTCGCC...ACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR GCA 90 bp | TACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGCAGAACAGTACCATaGAACACAGCTCCCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: YKFFYYNYLYHPRVRAPVRRTVP*NTAPTR Trigger: CCTGGTGGGAGCTGTGTTGCATGGTACTGTTCTGCG...CACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR GCA 90 bp | TTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTAGAAGCTCTGTCAGTTCCTaGAGCTGTTCCTGCAACCCT | + |
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Preference number: 4 (lower is better) Translates to: FYYNYLYHPRVRAPVRSRSSVSS*SCSCNP Trigger: AGGGTTGCAGGAACAGCTGCAGGAACTGACAGAGCT...TCTACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR GCA 90 bp | TCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTAAGCTCTGTCAGTTCCTaGAGCTGTTCCTGCAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFITIIYTTLGSGPPCVVSSVSS*SCSCNP Trigger: AGGGTTGCAGGAACAGCTGCAGGAACTGACAGAGCT...TACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR TCA 90 bp | AATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGCACCATTGGCAACAGTaGGCGATACAGCCAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NTSSFITIIYTTLGSGPPHHWQQ*AIQPGG Trigger: TCCTCCTGGCTGTATCGCTCACTGTTGCCAATGGTG...CGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | CAAAATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCGGCCCAGTGCAGTCGTaGGCGAAGAAGGTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QNTSSFITIIYTTLGSGPGPVQS*AKKVPG Trigger: TCCAGGAACCTTCTTCGCCCACGACTGCACTGGGCC...GGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | CAAAATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCAGGAGGAGGCCCATaGAGCAGGCAGCAGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QNTSSFITIIYTTLGSGPPGGGP*SRQQTR Trigger: TCTTGTCTGCTGCCTGCTCCATGGGCCTCCTCCTGG...GGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | TTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTAGAATCCATCAGTCCTGGGTaGCAATCAGCAATAAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: FITIIYTTLGSGPPCVVESISPG*QSAIRR Trigger: CCGTCTTATTGCTGATTGCCACCCAGGACTGATGGA...TTCTACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR TCA 90 bp | AAATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCCAATTCCCCGTAGCGTaGGTGCAGCCACACAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KYKFFYYNYLYHPRVRAPQFPVA*VQPHNS Trigger: ACTGTTGTGTGGCTGCACTCACGCTACGGGGAATTG...GGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR GCA 90 bp | AATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGAGCTCTGTCAGTTCCTaGAGCTGTTCCTGCAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTSSFITIIYTTLGSGPPSSVSS*SCSCNP Trigger: AGGGTTGCAGGAACAGCTGCAGGAACTGACAGAGCT...CGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR GCA 90 bp | CAAAATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCGCAGAACAGTACCATaGAACACAGCTCCCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: QNTSSFITIIYTTLGSGPRRTVP*NTAPTR Trigger: CCTGGTGGGAGCTGTGTTGCATGGTACTGTTCTGCG...GGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR GCA 90 bp | AATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGAGCTGCACGTTCTCCTaGCTTTTACACTCGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: NTSSFITIIYTTLGSGPPSCTFS*LLHSGS Trigger: ACTTCCCGAGTGTAAAAGGCAGGAGAACGTGCAGCT...CGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | AATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTCCATCAGTCCTGGGTaGCAATCAGCAATAAGACGG | + |
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Preference number: 4 (lower is better) Translates to: NTSSFITIIYTTLGSGPPSISPG*QSAIRR Trigger: CCGTCTTATTGCTGATTGCCACCCAGGACTGATGGA...CGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR GCA 90 bp | AAATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCAGCTGCACGTTCTCCTaGCTTTTACACTCGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: KYKFFYYNYLYHPRVRAPSCTFS*LLHSGS Trigger: ACTTCCCGAGTGTAAAAGGCAGGAGAACGTGCAGCT...GGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | AATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGAGGATCCATCAGTCCTaGGTGGCAATCAGCAATAAG | + |
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Preference number: 4 (lower is better) Translates to: NTSSFITIIYTTLGSGPPRIHQS*VAISNK Trigger: CTTATTGCTGATTGCCACCCAGGACTGATGGATCCT...CGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | CAAAATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCTCCATCAGTCCTGGGTaGCAATCAGCAATAAGACGG | + |
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Preference number: 4 (lower is better) Translates to: QNTSSFITIIYTTLGSGPSISPG*QSAIRR Trigger: CCGTCTTATTGCTGATTGCCACCCAGGACTGATGGA...GGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | AAATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCAGGATCCATCAGTCCTaGGTGGCAATCAGCAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: KYKFFYYNYLYHPRVRAPRIHQS*VAISNK Trigger: CTTATTGCTGATTGCCACCCAGGACTGATGGATCCT...GGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | TTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTTATCATAAATTCTTGTaGGATCAAAGGAGCAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FFYYNYLYHPRVRAPVRSYHKFL*DQRSSQ Trigger: CTGACTGCTCCTTTGATCCCACAAGAATTTATGATA...ACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | AGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTATATCATAAATTCTTGTaGGATCAAAGGAGCAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSFITIIYTTLGSGPPCVYHKFL*DQRSSQ Trigger: CTGACTGCTCCTTTGATCCCACAAGAATTTATGATA...TACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CCA 90 bp | AATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTATCATAAATTCTTGTaGGATCAAAGGAGCAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: NTSSFITIIYTTLGSGPPYHKFL*DQRSSQ Trigger: CTGACTGCTCCTTTGATCCCACAAGAATTTATGATA...CGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CCA 90 bp | CGTGGCCCACCAGGATCAGCGCGAGTCCCACGCGCATCAGCCGCCTaGGCCCTCGGGCGGCATCGAAGGCGCAGACGCCGCAGCACCTCA | + |
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Preference number: 5 (lower is better) Translates to: RGPPGSARVPRASAA*ALGRHRRRRRRSTS Trigger: TGAGGTGCTGCGGCGTCTGCGCCTTCGATGCCGCCCGAGGGCCCAGGCGGCTGATGCGCGTGGGACTCGCGCTGATCCTGGTGGGCCACG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS GCA 90 bp | GTGACCGCGCCTCGGGGGTTGGCCACGTGCCGCAGAACAGTACCATaGAACACAGCTCCCACCAGGAGGTTCACGTGGCCCACCAGGATC | + |
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Preference number: 5 (lower is better) Translates to: VTAPRGLATCRRTVP*NTAPTRRFTWPTRI Trigger: GATCCTGGTGGGCCACGTGAACCTCCTGGTGGGAGCTGTGTTGCATGGTACTGTTCTGCGGCACGTGGCCAACCCCCGAGGCGCGGTCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CCA 90 bp | CGCAGAACAGTACCATGCAACACAGCTCCCACCAGGAGGTTCACGTaGCCCACCAGGATCAGCGCGAGTCCCACGCGCATCAGCCGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RRTVPCNTAPTRRFT*PTRISASPTRISRL Trigger: CAGGCGGCTGATGCGCGTGGGACTCGCGCTGATCCTGGTGGGCCACGTGAACCTCCTGGTGGGAGCTGTGTTGCATGGTACTGTTCTGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS GCA 90 bp | GCTGTGGTGTACTCAGGAGTGACCGCGCCTCGGGGGTTGGCCACGTaGCGCAGAACAGTACCATGCAACACAGCTCCCACCAGGAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: AVVYSGVTAPRGLAT*RRTVPCNTAPTRRF Trigger: GAACCTCCTGGTGGGAGCTGTGTTGCATGGTACTGTTCTGCGGCACGTGGCCAACCCCCGAGGCGCGGTCACTCCTGAGTACACCACAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CCA 90 bp | CCAGCGTCAGCAGGGCCCAGTGCAGTCGTGGGCGAAGAAGGTTCCTaGATGCCAAGAGGGCCACAAGTCCCACTGAAACGCTCAGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: PASAGPSAVVGEEGS*MPRGPQVPLKRSVV Trigger: GACTACTGAGCGTTTCAGTGGGACTTGTGGCCCTCTTGGCATCCAGGAACCTTCTTCGCCCACGACTGCACTGGGCCCTGCTGACGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CCA 90 bp | CCAGGCCCCTGGTCCAGCGGTATGGAAGGATCCATCAGTCCTGGGTaGCAATCAGCAATAAGACGGCGGCCACCATTGGCAACAGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: PGPWSSGMEGSISPG*QSAIRRRPPLATVS Trigger: GCTCACTGTTGCCAATGGTGGCCGCCGTCTTATTGCTGATTGCCACCCAGGACTGATGGATCCTTCCATACCGCTGGACCAGGGGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CCA 90 bp | GTGTCCAGGCCCCTGGTCCAGCGGTATGGAAGGATCCATCAGTCCTaGGTGGCAATCAGCAATAAGACGGCGGCCACCATTGGCAACAGT | + |
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Preference number: 5 (lower is better) Translates to: VSRPLVQRYGRIHQS*VAISNKTAATIGNS Trigger: ACTGTTGCCAATGGTGGCCGCCGTCTTATTGCTGATTGCCACCCAGGACTGATGGATCCTTCCATACCGCTGGACCAGGGGCCTGGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS TCA 90 bp | GTTCCTGCAACCCTTCCTTCCTGCAGGGCCCAATTCCCCGTAGCGTaGGTGCAGCCACACAACAGTAACCAGAAAGAGCAGCCTCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: VPATLPSCRAQFPVA*VQPHNSNQKEQPQL Trigger: CAGCTGAGGCTGCTCTTTCTGGTTACTGTTGTGTGGCTGCACTCACGCTACGGGGAATTGGGCCCTGCAGGAAGGAAGGGTTGCAGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CAA 90 bp | TTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTAGAACCGCGCCTCGGGGGTaGGCCACGTGCCGCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: FYYNYLYHPRVRAPVRSRTAPRG*ATCRRT Trigger: TGTTCTGCGGCACGTGGCCAACCCCCGAGGCGCGGT...TCTACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CAA 90 bp | TACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGACCGCGCCTCGGGGGTaGGCCACGTGCCGCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: YKFFYYNYLYHPRVRAPVTAPRG*ATCRRT Trigger: TGTTCTGCGGCACGTGGCCAACCCCCGAGGCGCGGT...CACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CAA 90 bp | AAATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCACCGCGCCTCGGGGGTaGGCCACGTGCCGCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: KYKFFYYNYLYHPRVRAPTAPRG*ATCRRT Trigger: TGTTCTGCGGCACGTGGCCAACCCCCGAGGCGCGGT...GGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CAA 90 bp | TATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCGTAGTAGAAAAAGACGGCGGCCACCATaGGCAACAGTGAGCGATACA | + |
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Preference number: 5 (lower is better) Translates to: YYNYLYHPRVRAPVRSRKRRRPP*ATVSDT Trigger: TGTATCGCTCACTGTTGCCAATGGTGGCCGCCGTCT...TTTTCTACTACGCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CAA 90 bp | ACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCAGACGGCGGCCACCATaGGCAACAGTGAGCGATACA | + |
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Preference number: 5 (lower is better) Translates to: TSSFITIIYTTLGSGPPCRRRPP*ATVSDT Trigger: TGTATCGCTCACTGTTGCCAATGGTGGCCGCCGTCT...GCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CAA 90 bp | TACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCCCACAGAAATGACATaGGCTGTGGTGTACTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: YKFFYYNYLYHPRVRAPVPTEMT*AVVYSG Trigger: TCCTGAGTACACCACAGCCAATGTCATTTCTGTGGG...CACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CAA 90 bp | CAAAATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCAGACGGCGGCCACCATaGGCAACAGTGAGCGATACA | + |
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Preference number: 5 (lower is better) Translates to: QNTSSFITIIYTTLGSGPRRRPP*ATVSDT Trigger: TGTATCGCTCACTGTTGCCAATGGTGGCCGCCGTCT...GGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CAA 90 bp | CAAAATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCCACAGAAATGACATaGGCTGTGGTGTACTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: QNTSSFITIIYTTLGSGPPTEMT*AVVYSG Trigger: TCCTGAGTACACCACAGCCAATGTCATTTCTGTGGG...GGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATTTTG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CAA 90 bp | ACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCGTGCCTGTATCATAAATTCTaGTGGGATCAAAGGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: TSSFITIIYTTLGSGPPCLYHKF*WDQRSS Trigger: ACTGCTCCTTTGATCCCACAAGAATTTATGATACAG...GCACGGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS-3UTR CAA 90 bp | AAATACAAGTTCTTTTATTACAATTATTTATACCACCCTAGGGTCAGGGCCCCCCTGTATCATAAATTCTaGTGGGATCAAAGGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: KYKFFYYNYLYHPRVRAPLYHKF*WDQRSS Trigger: ACTGCTCCTTTGATCCCACAAGAATTTATGATACAG...GGGGGCCCTGACCCTAGGGTGGTATAAATAATTGTAATAAAAGAACTTGTATTT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CCA 72 bp | CCAGGATCAGCGCGAGTCCCACGCGCATCAGCCGCCTaGGCCCTCGGGCGGCATCGAAGGCGCAGACGCCGC | + |
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Preference number: 6 (lower is better) Translates to: PGSARVPRASAA*ALGRHRRRRRR Trigger: GCGGCGTCTGCGCCTTCGATGCCGCCCGAGGGCCCAGGCGGCTGATGCGCGTGGGACTCGCGCTGATCCTGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS GCA 72 bp | CCTCGGGGGTTGGCCACGTGCCGCAGAACAGTACCATaGAACACAGCTCCCACCAGGAGGTTCACGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PRGLATCRRTVP*NTAPTRRFTWP Trigger: GGGCCACGTGAACCTCCTGGTGGGAGCTGTGTTGCATGGTACTGTTCTGCGGCACGTGGCCAACCCCCGAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS GCA 72 bp | TACTCAGGAGTGACCGCGCCTCGGGGGTTGGCCACGTaGCGCAGAACAGTACCATGCAACACAGCTCCCACC | + |
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Preference number: 6 (lower is better) Translates to: YSGVTAPRGLAT*RRTVPCNTAPT Trigger: GGTGGGAGCTGTGTTGCATGGTACTGTTCTGCGGCACGTGGCCAACCCCCGAGGCGCGGTCACTCCTGAGTA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CCA 72 bp | GTACCATGCAACACAGCTCCCACCAGGAGGTTCACGTaGCCCACCAGGATCAGCGCGAGTCCCACGCGCATC | + |
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Preference number: 6 (lower is better) Translates to: VPCNTAPTRRFT*PTRISASPTRI Trigger: GATGCGCGTGGGACTCGCGCTGATCCTGGTGGGCCACGTGAACCTCCTGGTGGGAGCTGTGTTGCATGGTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CCA 72 bp | GCAGGGCCCAGTGCAGTCGTGGGCGAAGAAGGTTCCTaGATGCCAAGAGGGCCACAAGTCCCACTGAAACGC | + |
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Preference number: 6 (lower is better) Translates to: AGPSAVVGEEGS*MPRGPQVPLKR Trigger: GCGTTTCAGTGGGACTTGTGGCCCTCTTGGCATCCAGGAACCTTCTTCGCCCACGACTGCACTGGGCCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CAA 72 bp | GCTGTGGTGTACTCAGGAGTGACCGCGCCTCGGGGGTaGGCCACGTGCCGCAGAACAGTACCATGCAACACA | + |
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Preference number: 6 (lower is better) Translates to: AVVYSGVTAPRG*ATCRRTVPCNT Trigger: TGTGTTGCATGGTACTGTTCTGCGGCACGTGGCCAACCCCCGAGGCGCGGTCACTCCTGAGTACACCACAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CAA 90 bp | ATGACATTGGCTGTGGTGTACTCAGGAGTGACCGCGCCTCGGGGGTaGGCCACGTGCCGCAGAACAGTACCATGCAACACAGCTCCCACC | + |
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Preference number: 6 (lower is better) Translates to: MTLAVVYSGVTAPRG*ATCRRTVPCNTAPT Trigger: GGTGGGAGCTGTGTTGCATGGTACTGTTCTGCGGCACGTGGCCAACCCCCGAGGCGCGGTCACTCCTGAGTACACCACAGCCAATGTCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CAA 72 bp | CCTGGGTGGCAATCAGCAATAAGACGGCGGCCACCATaGGCAACAGTGAGCGATACAGCCAGGAGGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PGWQSAIRRRPP*ATVSDTARRRP Trigger: GGGCCTCCTCCTGGCTGTATCGCTCACTGTTGCCAATGGTGGCCGCCGTCTTATTGCTGATTGCCACCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CCA 72 bp | GTGGGATCAAAGGAGCAGTCAGTGTGTCCAGGCCCCTaGTCCAGCGGTATGGAAGGATCCATCAGTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: VGSKEQSVCPGP*SSGMEGSISPG Trigger: CCCAGGACTGATGGATCCTTCCATACCGCTGGACCAGGGGCCTGGACACACTGACTGCTCCTTTGATCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CAA 90 bp | AGTCCCACTGAAACGCTCAGTAGTCCCGAACCCACAGAAATGACATaGGCTGTGGTGTACTCAGGAGTGACCGCGCCTCGGGGGTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SPTETLSSPEPTEMT*AVVYSGVTAPRGLA Trigger: GGCCAACCCCCGAGGCGCGGTCACTCCTGAGTACACCACAGCCAATGTCATTTCTGTGGGTTCGGGACTACTGAGCGTTTCAGTGGGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CCA 72 bp | CCCCTGGTCCAGCGGTATGGAAGGATCCATCAGTCCTaGGTGGCAATCAGCAATAAGACGGCGGCCACCATT | + |
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Preference number: 6 (lower is better) Translates to: PLVQRYGRIHQS*VAISNKTAATI Trigger: AATGGTGGCCGCCGTCTTATTGCTGATTGCCACCCAGGACTGATGGATCCTTCCATACCGCTGGACCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS TCA 72 bp | ACCCTTCCTTCCTGCAGGGCCCAATTCCCCGTAGCGTaGGTGCAGCCACACAACAGTAACCAGAAAGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TLPSCRAQFPVA*VQPHNSNQKEQ Trigger: CTGCTCTTTCTGGTTACTGTTGTGTGGCTGCACTCACGCTACGGGGAATTGGGCCCTGCAGGAAGGAAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CCA 72 bp | TGGTCCAGCGGTATGGAAGGATCCATCAGTCCTGGGTaGCAATCAGCAATAAGACGGCGGCCACCATTGGCA | + |
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Preference number: 6 (lower is better) Translates to: WSSGMEGSISPG*QSAIRRRPPLA Trigger: TGCCAATGGTGGCCGCCGTCTTATTGCTGATTGCCACCCAGGACTGATGGATCCTTCCATACCGCTGGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CAA 72 bp | GAAACGCTCAGTAGTCCCGAACCCACAGAAATGACATaGGCTGTGGTGTACTCAGGAGTGACCGCGCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: ETLSSPEPTEMT*AVVYSGVTAPR Trigger: CCGAGGCGCGGTCACTCCTGAGTACACCACAGCCAATGTCATTTCTGTGGGTTCGGGACTACTGAGCGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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| CDS CCA 72 bp | GGATCCAGAGAGCCAAAGCTGTATCATAAATTCTTGTaGGATCAAAGGAGCAGTCAGTGTGTCCAGGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: GSREPKLYHKFL*DQRSSQCVQAP Trigger: AGGGGCCTGGACACACTGACTGCTCCTTTGATCCCACAAGAATTTATGATACAGCTTTGGCTCTCTGGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054829.13 ENSMUST00000201625.4 ENSMUST00000201937.4 |
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