Pregenerated sensors for KRTAP6-5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000062400

Ensembl transcript IDs: ENSMUST00000074637.4

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	CTCAGGAGTAAAATTCAGAGAAACAAAACCCTCAGGTCTTATATTTaGAGGTCATTAAAGGGCATATCTTCAACAAGGTCACATCATAAA	+
Preference number: 1 (lower is better) Translates to: LRSKIQRNKTLRSYI*RSLKGISSTRSHHK Trigger: TTTATGATGTGACCTTGTTGAAGATATGCCCTTTAATGACCTTCAAATATAAGACCTGAGGGTTTTGTTTCTCTGAATTTTACTCCTGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074637.4
3UTR CAA 90 bp	GTAAGAGCCTATAAGAAGGAAGTTCAGAAAACATGCAGTTCAGAATaGGAGATTTCTGAGCTCACATTCAAGGAGGTGAGAGTCTTCCAT	+
Preference number: 2 (lower is better) Translates to: VRAYKKEVQKTCSSE*EISELTFKEVRVFH Trigger: ATGGAAGACTCTCACCTCCTTGAATGTGAGCTCAGAAATCTCCAATTCTGAACTGCATGTTTTCTGAACTTCCTTCTTATAGGCTCTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074637.4
CDS-3UTR TCA 90 bp	GAATTGGAGATTTCTGAGCTCACATTCAAGGAGGTGAGAGTCTTCCATGGTGTCGCCATAGAGAGAGCGTaGGCCATAGCCACAGCCATA	+
Preference number: 4 (lower is better) Translates to: ELEISELTFKEVRVFHGVAIERA*AIATAI Trigger: TATGGCTGTGGCTATGGCTCACGCTCTCTCTATGGC...GACACCATGGAAGACTCTCACCTCCTTGAATGTGAGCTCAGAAATCTCCAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074637.4

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