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Pregenerated sensors for KRTAP5-3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046248

Ensembl transcript IDs: ENSMUST00000084414.6, ENSMUST00000187512.2

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCCCTTTGGCAGTAAATGGGAAGAGAGCAGCTCATTGGACAGCATaGAGACCCACAGTCATGGAGGAGCAGCAAGGACAGCAGCAGCTG +
Preference number: 1 (lower is better)
Translates to: LPLAVNGKRAAHWTA*RPTVMEEQQGQQQL
Trigger: CAGCTGCTGCTGTCCTTGCTGCTCCTCCATGACTGTGGGTCTTCATGCTGTCCAATGAGCTGCTCTCTTCCCATTTACTGCCAAAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187512.2
3UTR TCA 90 bp GAGGTGCAGTCTAGACTCATCCCCAGAAACCTCAAACAGATAGGATaGTTTGGACCTCTGAGCAGAATCTCAAATCTCCCTTTGGCAGTA +
Preference number: 1 (lower is better)
Translates to: EVQSRLIPRNLKQIG*FGPLSRISNLPLAV
Trigger: TACTGCCAAAGGGAGATTTGAGATTCTGCTCAGAGGTCCAAATCATCCTATCTGTTTGAGGTTTCTGGGGATGAGTCTAGACTGCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187512.2
3UTR CCA 90 bp ATTTGGACCTCTGAGCAGAATCTCAAATCTCCCTTTGGCAGTAAATaGGAAGAGAGCAGCTCATTGGACAGCATGAAGACCCACAGTCAT +
Preference number: 1 (lower is better)
Translates to: IWTSEQNLKSPFGSK*EESSSLDSMKTHSH
Trigger: ATGACTGTGGGTCTTCATGCTGTCCAATGAGCTGCTCTCTTCCCATTTACTGCCAAAGGGAGATTTGAGATTCTGCTCAGAGGTCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187512.2
3UTR-3UTR TCA 90 bp TCCTGCTATTGGCATGGAAGAATGGATGGGGCTCTAAGGGGCCTGTGGATGCTGCACTCCTCTATTGCCTaGCAAATGGATGTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: SCYWHGRMDGALRGLWMLHSSIA*QMDVQL
Trigger: AAGCTGGACATCCATTTGTCAGGCAATAGAGGAGTG...CAGCATCCACAGGCCCCTTAGAGCCCCATCCATTCTTCCATGCCAATAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084414.6
ENSMUST00000187512.2
3UTR-3UTR GCA 90 bp TCCTGCTATTGGCATGGAAGAATGGATGGGGCTCTAAGGGGCCTGTGGATGCTGTTTAGGGCTTTGAGGTaGAGTCTAGACTCATCCCCA +
Preference number: 2 (lower is better)
Translates to: SCYWHGRMDGALRGLWMLFRALR*SLDSSP
Trigger: TGGGGATGAGTCTAGACTGCACCTCAAAGCCCTAAA...CAGCATCCACAGGCCCCTTAGAGCCCCATCCATTCTTCCATGCCAATAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084414.6
ENSMUST00000187512.2
3UTR-3UTR CCA 90 bp ATCCTAGGTGGCATCGAAAAGGATCTGGGTTTCCTATTAGAGGTGATGGGCAGGGCTCTAAGGGGCCTGTaGATGCTGAGAAAAGTACTG +
Preference number: 2 (lower is better)
Translates to: ILGGIEKDLGFLLEVMGRALRGL*MLRKVL
Trigger: CAGTACTTTTCTCAGCATCCACAGGCCCCTTAGAGC...CCTGCCCATCACCTCTAATAGGAAACCCAGATCCTTTTCGATGCCACCTAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084414.6
ENSMUST00000187512.2
3UTR-3UTR CCA 90 bp AAACCTCAAACAGATAGGATGATTTGGACCTCTGAGCAGAATCTCAAATCTCCCGAAGACCCACAGTCATaGAGGAGCAGCAAGGACAGC +
Preference number: 2 (lower is better)
Translates to: KPQTDRMIWTSEQNLKSPEDPQS*RSSKDS
Trigger: GCTGTCCTTGCTGCTCCTCCATGACTGTGGGTCTTC...GGGAGATTTGAGATTCTGCTCAGAGGTCCAAATCATCCTATCTGTTTGAGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187512.2
3UTR CCA 72 bp GGGCTGACCTTCCTGCTATTGGCATGGAAGAATGGATaGGGCTCTAAGGGGCCTGTGGATGCTGAGAAAAGT +
Preference number: 3 (lower is better)
Translates to: GLTFLLLAWKNG*GSKGPVDAEKS
Trigger: ACTTTTCTCAGCATCCACAGGCCCCTTAGAGCCCCATCCATTCTTCCATGCCAATAGCAGGAAGGTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084414.6
ENSMUST00000187512.2
3UTR-3UTR CAA 90 bp TGCTATTGGCATGGAAGAATGGATGGGGCTCTAAGGGGCCTGTGGATGCTGAGAGAAGAGAGCAGCTCATaGGACAGCATGAAGACCCAC +
Preference number: 3 (lower is better)
Translates to: CYWHGRMDGALRGLWMLREESSS*DSMKTH
Trigger: GTGGGTCTTCATGCTGTCCAATGAGCTGCTCTCTTC...TCTCAGCATCCACAGGCCCCTTAGAGCCCCATCCATTCTTCCATGCCAATAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187512.2
3UTR CCA 72 bp TACCTTATGGTAGGGCTGACCTTCCTGCTATTGGCATaGAAGAATGGATGGGGCTCTAAGGGGCCTGTGGAT +
Preference number: 3 (lower is better)
Translates to: YLMVGLTFLLLA*KNGWGSKGPVD
Trigger: ATCCACAGGCCCCTTAGAGCCCCATCCATTCTTCCATGCCAATAGCAGGAAGGTCAGCCCTACCATAAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084414.6
ENSMUST00000187512.2
3UTR TCA 72 bp GTGATGGGCAGGAGGACTGTGCACTCCTCTATTGCCTaGCAAATGGATGTCCAGCTTTGTAGATCAAGGAAA +
Preference number: 3 (lower is better)
Translates to: VMGRRTVHSSIA*QMDVQLCRSRK
Trigger: TTTCCTTGATCTACAAAGCTGGACATCCATTTGTCAGGCAATAGAGGAGTGCACAGTCCTCCTGCCCATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084414.6
ENSMUST00000187512.2
3UTR-3UTR CAA 90 bp AAGGATCTGGGTTTCCTATTAGAGGTGATGGGCAGGAGGACTGTGCACTCCTCTATCTCAAATCTCCCTTaGGCAGTAAATGGGAAGAGA +
Preference number: 3 (lower is better)
Translates to: KDLGFLLEVMGRRTVHSSISNLP*AVNGKR
Trigger: TCTCTTCCCATTTACTGCCAAAGGGAGATTTGAGAT...AGAGGAGTGCACAGTCCTCCTGCCCATCACCTCTAATAGGAAACCCAGATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187512.2
3UTR CCA 72 bp TCTGAGCAGAATCTCAAATCTCCCTTTGGCAGTAAATaGGAAGAGAGCAGCTCATTGGACAGCATGAAGACC +
Preference number: 3 (lower is better)
Translates to: SEQNLKSPFGSK*EESSSLDSMKT
Trigger: GGTCTTCATGCTGTCCAATGAGCTGCTCTCTTCCCATTTACTGCCAAAGGGAGATTTGAGATTCTGCTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187512.2
3UTR CCA 72 bp ACTCATCCCCAGAAACCTCAAACAGATAGGATGATTTaGACCTCTGAGCAGAATCTCAAATCTCCCTTTGGC +
Preference number: 3 (lower is better)
Translates to: THPQKPQTDRMI*TSEQNLKSPFG
Trigger: GCCAAAGGGAGATTTGAGATTCTGCTCAGAGGTCCAAATCATCCTATCTGTTTGAGGTTTCTGGGGATGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187512.2
CDS-3UTR GCA 90 bp TCCTGCTATTGGCATGGAAGAATGGATGGGGCTCTAAGGGGCCTGTGGATGCTGAACTACAGCATCCCTTaGAGCCACCACAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: SCYWHGRMDGALRGLWMLNYSIP*SHHRCH
Trigger: GTGGCACCTGTGGTGGCTGCAAGGGATGCTGTAGTT...CAGCATCCACAGGCCCCTTAGAGCCCCATCCATTCTTCCATGCCAATAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187512.2
CDS-3UTR CCA 90 bp CCTAGGTGGCATCGAAAAGGATCTGGGTTTCCTATTAGAGGTGATGGGCAGGAGCAGGCTTGCAGCAGCTaGAGCCACAGCCTCCACAAC +
Preference number: 4 (lower is better)
Translates to: PRWHRKGSGFPIRGDGQEQACSS*SHSLHN
Trigger: GTTGTGGAGGCTGTGGCTCCAGCTGCTGCAAGCCTG...CTCCTGCCCATCACCTCTAATAGGAAACCCAGATCCTTTTCGATGCCACCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084414.6
ENSMUST00000187512.2
CDS-3UTR CCA 90 bp GTAGGGCTGACCTTCCTGCTATTGGCATGGAAGAATGGATGGGGCTCTAAGGGGAAGGACAGCAGCAGCTaGACTAGCAACAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VGLTFLLLAWKNGWGSKGKDSSS*TSNSWA
Trigger: AGCCCAGCTGTTGCTAGTCCAGCTGCTGCTGTCCTT...CCCCTTAGAGCCCCATCCATTCTTCCATGCCAATAGCAGGAAGGTCAGCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084414.6
CDS-3UTR TCA 90 bp AAAGGATCTGGGTTTCCTATTAGAGGTGATGGGCAGGAGGACTGTGCACTCCTCGCTCATTGGACAGCATaGAGACCCACAGTCATGGAG +
Preference number: 4 (lower is better)
Translates to: KGSGFPIRGDGQEDCALLAHWTA*RPTVME
Trigger: CTCCATGACTGTGGGTCTTCATGCTGTCCAATGAGC...GAGGAGTGCACAGTCCTCCTGCCCATCACCTCTAATAGGAAACCCAGATCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084414.6
3UTR CAA 72 bp TCTCCCTTTGGCAGTAAATGGGAAGAGAGCAGCTCATaGGACAGCATGAAGACCCACAGTCATGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SPFGSKWEESSS*DSMKTHSHGGA
Trigger: TGCTCCTCCATGACTGTGGGTCTTCATGCTGTCCAATGAGCTGCTCTCTTCCCATTTACTGCCAAAGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187512.2
CDS-3UTR CCA 90 bp AAACCTCAAACAGATAGGATGATTTGGACCTCTGAGCAGAATCTCAAATCTCCCCAGGCTTGCAGCAGCTaGAGCCACAGCCTCCACAAC +
Preference number: 4 (lower is better)
Translates to: KPQTDRMIWTSEQNLKSPQACSS*SHSLHN
Trigger: GTTGTGGAGGCTGTGGCTCCAGCTGCTGCAAGCCTG...GGGAGATTTGAGATTCTGCTCAGAGGTCCAAATCATCCTATCTGTTTGAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187512.2
CDS-3UTR CCA 90 bp ACTCATCCCCAGAAACCTCAAACAGATAGGATGATTTGGACCTCTGAGCAGAATGAAGACCCACAGTCATaGAGGAGCAGCAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: THPQKPQTDRMIWTSEQNEDPQS*RSSKDS
Trigger: GCTGTCCTTGCTGCTCCTCCATGACTGTGGGTCTTC...ATTCTGCTCAGAGGTCCAAATCATCCTATCTGTTTGAGGTTTCTGGGGATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084414.6
CDS-3UTR CCA 90 bp ATCCTAGGTGGCATCGAAAAGGATCTGGGTTTCCTATTAGAGGTGATGGGCAGGCCCTTTGGCAGTAAATaGGAAGAGAGCAGCTCATTG +
Preference number: 4 (lower is better)
Translates to: ILGGIEKDLGFLLEVMGRPFGSK*EESSSL
Trigger: CAATGAGCTGCTCTCTTCCCATTTACTGCCAAAGGG...CCTGCCCATCACCTCTAATAGGAAACCCAGATCCTTTTCGATGCCACCTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084414.6
CDS-3UTR CAA 90 bp AAAGGATCTGGGTTTCCTATTAGAGGTGATGGGCAGGAGGACTGTGCACTCCTCGAACTACAGCATCCCTaGCAGCCACCACAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: KGSGFPIRGDGQEDCALLELQHP*QPPQVP
Trigger: TGGCACCTGTGGTGGCTGCAAGGGATGCTGTAGTTC...GAGGAGTGCACAGTCCTCCTGCCCATCACCTCTAATAGGAAACCCAGATCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187512.2
CDS-3UTR CAA 90 bp ATCCTAGGTGGCATCGAAAAGGATCTGGGTTTCCTATTAGAGGTGATGGGCAGGGAAGAGAGCAGCTCATaGGACAGCATGAAGACCCAC +
Preference number: 5 (lower is better)
Translates to: ILGGIEKDLGFLLEVMGREESSS*DSMKTH
Trigger: GTGGGTCTTCATGCTGTCCAATGAGCTGCTCTCTTC...CCTGCCCATCACCTCTAATAGGAAACCCAGATCCTTTTCGATGCCACCTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084414.6