Pregenerated sensors for KRTAP31-2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051481Ensembl transcript IDs: ENSMUST00000058761.6
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGAGGCTGAGGGTGAGGGACTCACACAGGTTGGCTTaGAGCAGTTGCTGTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: HPGRPSTVSGDERLRVRDSHRLA*SSCCHR Trigger: CCTGTGACAGCAACTGCTGCAAGCCAACCTGTGTGA...GTCCCTCACCCTCAGCCTCTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR CCA 90 bp | CTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGAGGCTGGGTTGGCAGCAGAGCTaGAAGAGGCTAGGCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LHISHPGRPSTVSGDERLGWQQS*KRLGWQ Trigger: CTGCCAGCCTAGCCTCTTCCAGCTCTGCTGCCAACC...CAGCCTCTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR GCA 90 bp | CCAGACCTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGTGCAGGAGGTGGTCTTaGAGCAGCATGGCTGACAGG | + |
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Preference number: 4 (lower is better) Translates to: PDLHISHPGRPSTVSGDECRRWS*SSMADR Trigger: CCTGTCAGCCATGCTGCTGCAAGACCACCTCCTGCA...CTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAGGTCTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR CCA 90 bp | CCAGACCTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGAGGTCCTGCAGGAGGTaGTCTTGCAGCAGCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: PDLHISHPGRPSTVSGDERSCRR*SCSSMA Trigger: AGCCATGCTGCTGCAAGACCACCTCCTGCAGGACCT...CTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAGGTCTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR CCA 90 bp | GACCTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGAGGTGGATTCAGAGCTGCTaGAGGTCCTGCAGGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: DLHISHPGRPSTVSGDERWIQSC*RSCRRW Trigger: CCACCTCCTGCAGGACCTCCAGCAGCTCTGAATCCA...CCTCTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAGGTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR CCA 90 bp | CTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGAGGCTGAGGGTCACAGCAGGTTaGTGGACAGCACAGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LHISHPGRPSTVSGDERLRVTAG*WTAQLG Trigger: TCCCAGCTGTGCTGTCCACCAACCTGCTGTGACCCT...CAGCCTCTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR CCA 90 bp | CTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGAGGCTGGTCATCAGTGGGAGATaGGCACACACAGCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LHISHPGRPSTVSGDERLVISGR*AHTAGL Trigger: CAGCCCTGCTGTGTGTGCCCATCTCCCACTGATGAC...CAGCCTCTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR CCA 90 bp | CTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGAGGCTGGGAGCTGGTCATCAGTaGGAGATGGGCACACACAGC | + |
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Preference number: 4 (lower is better) Translates to: LHISHPGRPSTVSGDERLGAGHQ*EMGTHS Trigger: GCTGTGTGTGCCCATCTCCCACTGATGACCAGCTCC...CAGCCTCTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR GCA 90 bp | CCAGACCTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGTTGGCTTGCAGCAGTTaGTGTCACAGGAGGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: PDLHISHPGRPSTVSGDELACSS*CHRRQG Trigger: ACCCTGCCTCCTGTGACAGCAACTGCTGCAAGCCAA...CTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAGGTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR CCA 90 bp | GACCTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGAGGGGTCTTGCAGCAGCATaGCTGACAGGTGTGGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: DLHISHPGRPSTVSGDERGLAAA*LTGVGH Trigger: ATGACCCACACCTGTCAGCCATGCTGCTGCAAGACC...CCTCTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR CCA 90 bp | GACCTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGAGGGTCACAGCAGGTTGGTaGACAGCACAGCTGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: DLHISHPGRPSTVSGDERVTAGW*TAQLGT Trigger: TGTTCCCAGCTGTGCTGTCCACCAACCTGCTGTGAC...CCTCTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR CCA 90 bp | GACCTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGAGGGCTCTCGCAGGAGCATaGCTTTGTTCCTTTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: DLHISHPGRPSTVSGDERALAGA*LCSFGS Trigger: GCTCCCAAAGGAACAAAGCCATGCTCCTGCGAGAGC...CCTCTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR CCA 90 bp | CCAGACCTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGTCACAGCAAGTTGGTTaGCAGCAGAGCTGGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: PDLHISHPGRPSTVSGDESQQVG*QQSWKR Trigger: CCTCTTCCAGCTCTGCTGCCAACCAACTTGCTGTGA...CTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAGGTCTGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR CCA 90 bp | CCAGACCTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGTGTTCCTTTGGGAGCTaGTCATCAGTGGGAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: PDLHISHPGRPSTVSGDECSFGS*SSVGDG Trigger: CCCATCTCCCACTGATGACCAGCTCCCAAAGGAACA...CTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAGGTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR CCA 90 bp | GACCTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGAGGGGTTTCACAGCAAGTTaGTTGGCAGCAGAGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: DLHISHPGRPSTVSGDERGFTAS*LAAELE Trigger: TTCCAGCTCTGCTGCCAACCAACTTGCTGTGAAACC...CCTCTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS CCA 90 bp | CTGTCACAGGAGGCAGGGTCACAGCAGGTTGGTGGACAGCACAGCTaGGAACAGCTGTTGACAGTCTTGGTGCTGTGGCAGCAGATAGAC | + |
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Preference number: 5 (lower is better) Translates to: LSQEAGSQQVGGQHS*EQLLTVLVLWQQID Trigger: GTCTATCTGCTGCCACAGCACCAAGACTGTCAACAGCTGTTCCCAGCTGTGCTGTCCACCAACCTGCTGTGACCCTGCCTCCTGTGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS CCA 90 bp | CTTGCAGCAGTTGCTGTCACAGGAGGCAGGGTCACAGCAGGTTGGTaGACAGCACAGCTGGGAACAGCTGTTGACAGTCTTGGTGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: LAAVAVTGGRVTAGW*TAQLGTAVDSLGAV Trigger: CACAGCACCAAGACTGTCAACAGCTGTTCCCAGCTGTGCTGTCCACCAACCTGCTGTGACCCTGCCTCCTGTGACAGCAACTGCTGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS CCA 90 bp | GTGGCAGCAGATAGACTTGCAACAACAGGGTGTGCTGCACCAACTTaGGGCGCAGCAGATGAACACAGGGCAGCTGGATTCAGAGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: VAADRLATTGCAAPT*GAADEHRAAGFRAG Trigger: TCCAGCTCTGAATCCAGCTGCCCTGTGTTCATCTGCTGCGCCCCAAGTTGGTGCAGCACACCCTGTTGTTGCAAGTCTATCTGCTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR CAA 90 bp | CATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGAGGCTGAGGGTGAGGGACCATGGCTTTGTTCCTTaGGGAGCTGGTCATCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: HPGRPSTVSGDERLRVRDHGFVP*GAGHQW Trigger: CCACTGATGACCAGCTCCCAAAGGAACAAAGCCATG...GTCCCTCACCCTCAGCCTCTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR CAA 90 bp | GACCTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGAGGCGCAGGAGCATGGCTTaGTTCCTTTGGGAGCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: DLHISHPGRPSTVSGDERRRSMA*FLWELV Trigger: GACCAGCTCCCAAAGGAACAAAGCCATGCTCCTGCG...CCTCTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS-3UTR CAA 90 bp | CCAGACCTTCATATCAGCCATCCAGGAAGACCATCCACAGTCTCAGGAGATGAGTTAAAGGAGATGGTCTaGCAGCAGCTGGTTTCACAG | + |
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Preference number: 5 (lower is better) Translates to: PDLHISHPGRPSTVSGDELKEMV*QQLVSQ Trigger: CTGTGAAACCAGCTGCTGCAAGACCATCTCCTTTAA...CTCATCTCCTGAGACTGTGGATGGTCTTCCTGGATGGCTGATATGAAGGTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS GCA 72 bp | ACACAGGGCAGCTGGATTCAGAGCTGGATTCAGAGCTaGTGGAGGTCCTGCAGGAGGTGGTCTTGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TQGSWIQSWIQS*WRSCRRWSCSS Trigger: GCTGCTGCAAGACCACCTCCTGCAGGACCTCCAGCAGCTCTGAATCCAGCTCTGAATCCAGCTGCCCTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS CCA 72 bp | AGCTGGATTCAGAGCTGCTGGAGGTCCTGCAGGAGGTaGTCTTGCAGCAGCATGGCTGACAGGTGTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SWIQSCWRSCRR*SCSSMADRCGS Trigger: TGACCCACACCTGTCAGCCATGCTGCTGCAAGACCACCTCCTGCAGGACCTCCAGCAGCTCTGAATCCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS CCA 72 bp | GCTCTCGCAGGAGCATGGCTTTGTTCCTTTGGGAGCTaGTCATCAGTGGGAGATGGGCACACACAGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: ALAGAWLCSFGS*SSVGDGHTQQG Trigger: GCCCTGCTGTGTGTGCCCATCTCCCACTGATGACCAGCTCCCAAAGGAACAAAGCCATGCTCCTGCGAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS CAA 72 bp | GCATGCCAGCTCTCGCAGGAGCATGGCTTTGTTCCTTaGGGAGCTGGTCATCAGTGGGAGATGGGCACACAC | + |
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Preference number: 6 (lower is better) Translates to: ACQLSQEHGFVP*GAGHQWEMGTH Trigger: GTGTGTGCCCATCTCCCACTGATGACCAGCTCCCAAAGGAACAAAGCCATGCTCCTGCGAGAGCTGGCATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS CAA 72 bp | CACACAGGGCATGCCAGCTCTCGCAGGAGCATGGCTTaGTTCCTTTGGGAGCTGGTCATCAGTGGGAGATGG | + |
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Preference number: 6 (lower is better) Translates to: HTGHASSRRSMA*FLWELVISGRW Trigger: CCATCTCCCACTGATGACCAGCTCCCAAAGGAACAAAGCCATGCTCCTGCGAGAGCTGGCATGCCCTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS CCA 72 bp | GTTGCTGTCACAGGAGGCAGGGTCACAGCAGGTTGGTaGACAGCACAGCTGGGAACAGCTGTTGACAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: VAVTGGRVTAGW*TAQLGTAVDSL Trigger: AAGACTGTCAACAGCTGTTCCCAGCTGTGCTGTCCACCAACCTGCTGTGACCCTGCCTCCTGTGACAGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS CCA 72 bp | CATGCCAGCTCTCGCAGGAGCATGGCTTTGTTCCTTTaGGAGCTGGTCATCAGTGGGAGATGGGCACACACA | + |
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Preference number: 6 (lower is better) Translates to: HASSRRSMALFL*ELVISGRWAHT Trigger: TGTGTGTGCCCATCTCCCACTGATGACCAGCTCCCAAAGGAACAAAGCCATGCTCCTGCGAGAGCTGGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS CAA 90 bp | CAGCAGGTTGGTGGACAGCACAGCTGGGAACAGCTGTTGACAGTCTaGGTGCTGTGGCAGCAGATAGACTTGCAACAACAGGGTGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: QQVGGQHSWEQLLTV*VLWQQIDLQQQGVL Trigger: CAGCACACCCTGTTGTTGCAAGTCTATCTGCTGCCACAGCACCAAGACTGTCAACAGCTGTTCCCAGCTGTGCTGTCCACCAACCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS CAA 90 bp | GCAGGGTCACAGCAGGTTGGTGGACAGCACAGCTGGGAACAGCTGTaGACAGTCTTGGTGCTGTGGCAGCAGATAGACTTGCAACAACAG | + |
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Preference number: 6 (lower is better) Translates to: AGSQQVGGQHSWEQL*TVLVLWQQIDLQQQ Trigger: CTGTTGTTGCAAGTCTATCTGCTGCCACAGCACCAAGACTGTCAACAGCTGTTCCCAGCTGTGCTGTCCACCAACCTGCTGTGACCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS CAA 72 bp | CTGTTGACAGTCTTGGTGCTGTGGCAGCAGATAGACTaGCAACAACAGGGTGTGCTGCACCAACTTGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LLTVLVLWQQID*QQQGVLHQLGA Trigger: CGCCCCAAGTTGGTGCAGCACACCCTGTTGTTGCAAGTCTATCTGCTGCCACAGCACCAAGACTGTCAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS CAA 72 bp | CAGCAGGTTGGTGGACAGCACAGCTGGGAACAGCTGTaGACAGTCTTGGTGCTGTGGCAGCAGATAGACTTG | + |
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Preference number: 6 (lower is better) Translates to: QQVGGQHSWEQL*TVLVLWQQIDL Trigger: CAAGTCTATCTGCTGCCACAGCACCAAGACTGTCAACAGCTGTTCCCAGCTGTGCTGTCCACCAACCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS CCA 72 bp | CACAGCTGGGAACAGCTGTTGACAGTCTTGGTGCTGTaGCAGCAGATAGACTTGCAACAACAGGGTGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: HSWEQLLTVLVL*QQIDLQQQGVL Trigger: CAGCACACCCTGTTGTTGCAAGTCTATCTGCTGCCACAGCACCAAGACTGTCAACAGCTGTTCCCAGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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| CDS CAA 72 bp | GGTGGACAGCACAGCTGGGAACAGCTGTTGACAGTCTaGGTGCTGTGGCAGCAGATAGACTTGCAACAACAG | + |
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Preference number: 6 (lower is better) Translates to: GGQHSWEQLLTV*VLWQQIDLQQQ Trigger: CTGTTGTTGCAAGTCTATCTGCTGCCACAGCACCAAGACTGTCAACAGCTGTTCCCAGCTGTGCTGTCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058761.6 |
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