Pregenerated sensors for KRTAP31-1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070334Ensembl transcript IDs: ENSMUST00000093935.3
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACATGAAGATGGTACAAGATCCACAGTCTCTGGAGATGAGAGGGTaGGGGACTCCATCCTTCCTCAACACATTTCATCTCTTAAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: HMKMVQDPQSLEMRG*GTPSFLNTFHLLRK Trigger: CTTTCTTAAGAGATGAAATGTGTTGAGGAAGGATGGAGTCCCTCACCCTCTCATCTCCAGAGACTGTGGATCTTGTACCATCTTCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| 3UTR TCA 72 bp | GTTAGAGATGTAAAGATCCTGCCTCAGAACTTAAGCTaGTATCAGATCTTCATGCCAGTCACACATGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: VRDVKILPQNLS*YQIFMPVTHED Trigger: ATCTTCATGTGTGACTGGCATGAAGATCTGATATCAGCTTAAGTTCTGAGGCAGGATCTTTACATCTCTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS-3UTR GCA 90 bp | GAGAGGGTGAGGGACTCCATCCTTCCTCAACACATTTCATCTCTTAAGAAAGCCAGCTGCTGGAGGTCCTaGAGGAGGCGGTCTTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ERVRDSILPQHISSLKKASCWRS*RRRSCS Trigger: GCTGCAAGACCGCCTCCTGCAGGACCTCCAGCAGCT...GGCTTTCTTAAGAGATGAAATGTGTTGAGGAAGGATGGAGTCCCTCACCCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS-3UTR CCA 90 bp | GAGAGGGTGAGGGACTCCATCCTTCCTCAACACATTTCATCTCTTAAGAAAGCCTGGATTCAGAGCTGCTaGAGGTCCTGCAGGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: ERVRDSILPQHISSLKKAWIQSC*RSCRRR Trigger: CCGCCTCCTGCAGGACCTCCAGCAGCTCTGAATCCA...GGCTTTCTTAAGAGATGAAATGTGTTGAGGAAGGATGGAGTCCCTCACCCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS-3UTR CCA 90 bp | AACACATTTCATCTCTTAAGAAAGCCTACATTTGTCAGGTCCCCTGGTGAGAACGTTATCAGCGGCAGATaGGCACACACAGCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NTFHLLRKPTFVRSPGENVISGR*AHTAGL Trigger: CAGCCCTGCTGTGTGTGCCCATCTGCCGCTGATAAC...GTTCTCACCAGGGGACCTGACAAATGTAGGCTTTCTTAAGAGATGAAATGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS-3UTR CCA 90 bp | GAGAGGGTGAGGGACTCCATCCTTCCTCAACACATTTCATCTCTTAAGAAAGCCATGGCTTTGTTCCTTTaGGAGCTGGTTATCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: ERVRDSILPQHISSLKKAMALFL*ELVISG Trigger: GCCGCTGATAACCAGCTCCCAAAGGAACAAAGCCAT...GGCTTTCTTAAGAGATGAAATGTGTTGAGGAAGGATGGAGTCCCTCACCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS GCA 90 bp | CAGGGCAGCTGGATTCAGAGCTGGATTCAGAGCTGCTGGAGGTCCTaGAGGAGGCGGTCTTGCAGCAGCATGGCTGACAGGTGTGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: QGSWIQSWIQSCWRS*RRRSCSSMADRCGS Trigger: TGACCCACACCTGTCAGCCATGCTGCTGCAAGACCGCCTCCTGCAGGACCTCCAGCAGCTCTGAATCCAGCTCTGAATCCAGCTGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS TCA 90 bp | ACTTGCAACAACAGGGTGTGCTGCACCAACTTGGGGCGCAGCAGATaGACACAGGGCAGCTGGATTCAGAGCTGGATTCAGAGCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: TCNNRVCCTNLGRSR*TQGSWIQSWIQSCW Trigger: CCAGCAGCTCTGAATCCAGCTCTGAATCCAGCTGCCCTGTGTTCATCTGCTGCGCCCCAAGTTGGTGCAGCACACCCTGTTGTTGCAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS-3UTR CAA 90 bp | ACACATGAAGATGGTACAAGATCCACAGTCTCTGGAGATGAGAGGGTGAGGGACTGGTTTCACAGCAAGTaGGTTGGCAGCAGAGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: THEDGTRSTVSGDERVRDWFHSK*VGSRAG Trigger: TCCAGCTCTGCTGCCAACCAACTTGCTGTGAAACCA...GTCCCTCACCCTCTCATCTCCAGAGACTGTGGATCTTGTACCATCTTCATGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS-3UTR CAA 90 bp | AACACATTTCATCTCTTAAGAAAGCCTACATTTGTCAGGTCCCCTGGTGAGAACGTTGGCTTGCAGCAGTaGCTGTCACAGGAGGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: NTFHLLRKPTFVRSPGENVGLQQ*LSQEAG Trigger: CCCTGCCTCCTGTGACAGCAACTGCTGCAAGCCAAC...GTTCTCACCAGGGGACCTGACAAATGTAGGCTTTCTTAAGAGATGAAATGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS-3UTR CAA 90 bp | TTCATGCCAGTCACACATGAAGATGGTACAAGATCCACAGTCTCTGGAGATGAGGTCACACAGGTTGGCTaGCAGCAGTTGCTGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: FMPVTHEDGTRSTVSGDEVTQVG*QQLLSQ Trigger: CTGTGACAGCAACTGCTGCAAGCCAACCTGTGTGAC...CTCATCTCCAGAGACTGTGGATCTTGTACCATCTTCATGTGTGACTGGCATGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS-3UTR CAA 90 bp | TTCATGCCAGTCACACATGAAGATGGTACAAGATCCACAGTCTCTGGAGATGAGCGCAGGAGCATGGCTTaGTTCCTTTGGGAGCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: FMPVTHEDGTRSTVSGDERRSMA*FLWELV Trigger: AACCAGCTCCCAAAGGAACAAAGCCATGCTCCTGCG...CTCATCTCCAGAGACTGTGGATCTTGTACCATCTTCATGTGTGACTGGCATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS-3UTR CAA 90 bp | CAGATCTTCATGCCAGTCACACATGAAGATGGTACAAGATCCACAGTCTCTGGATGGCAGCAGATAGACTaGCAACAACAGGGTGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: QIFMPVTHEDGTRSTVSGWQQID*QQQGVL Trigger: CAGCACACCCTGTTGTTGCAAGTCTATCTGCTGCCA...TCCAGAGACTGTGGATCTTGTACCATCTTCATGTGTGACTGGCATGAAGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS-3UTR CAA 90 bp | GGAGATGAGAGGGTGAGGGACTCCATCCTTCCTCAACACATTTCATCTCTTAAGTTAAAGGAGGTGGTCTaGCAGCAGCTGGTTTCACAG | + |
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Preference number: 5 (lower is better) Translates to: GDERVRDSILPQHISSLKLKEVV*QQLVSQ Trigger: CTGTGAAACCAGCTGCTGCAAGACCACCTCCTTTAA...CTTAAGAGATGAAATGTGTTGAGGAAGGATGGAGTCCCTCACCCTCTCATCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS-3UTR CAA 90 bp | CAGATCTTCATGCCAGTCACACATGAAGATGGTACAAGATCCACAGTCTCTGGACATGGCTTTGTTCCTTaGGGAGCTGGTTATCAGCGG | + |
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Preference number: 5 (lower is better) Translates to: QIFMPVTHEDGTRSTVSGHGFVP*GAGYQR Trigger: CCGCTGATAACCAGCTCCCAAAGGAACAAAGCCATG...TCCAGAGACTGTGGATCTTGTACCATCTTCATGTGTGACTGGCATGAAGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS-3UTR CAA 90 bp | AACACATTTCATCTCTTAAGAAAGCCTACATTTGTCAGGTCCCCTGGTGAGAACCAGCTGTTGACAGTCTaGGTGCTGTGGCAGCAGATA | + |
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Preference number: 5 (lower is better) Translates to: NTFHLLRKPTFVRSPGENQLLTV*VLWQQI Trigger: TATCTGCTGCCACAGCACCAAGACTGTCAACAGCTG...GTTCTCACCAGGGGACCTGACAAATGTAGGCTTTCTTAAGAGATGAAATGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS GCA 72 bp | ACACAGGGCAGCTGGATTCAGAGCTGGATTCAGAGCTaGTGGAGGTCCTGCAGGAGGCGGTCTTGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TQGSWIQSWIQS*WRSCRRRSCSS Trigger: GCTGCTGCAAGACCGCCTCCTGCAGGACCTCCAGCAGCTCTGAATCCAGCTCTGAATCCAGCTGCCCTGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS CAA 90 bp | GCACACAGGGCATGCCAGCTCTCGCAGGAGCATGGCTTTGTTCCTTaGGGAGCTGGTTATCAGCGGCAGATGGGCACACACAGCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: AHRACQLSQEHGFVP*GAGYQRQMGTHSRA Trigger: AGCCCTGCTGTGTGTGCCCATCTGCCGCTGATAACCAGCTCCCAAAGGAACAAAGCCATGCTCCTGCGAGAGCTGGCATGCCCTGTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS GCA 72 bp | TGGATTCAGAGCTGGATTCAGAGCTGCTGGAGGTCCTaGAGGAGGCGGTCTTGCAGCAGCATGGCTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: WIQSWIQSCWRS*RRRSCSSMADR Trigger: CCTGTCAGCCATGCTGCTGCAAGACCGCCTCCTGCAGGACCTCCAGCAGCTCTGAATCCAGCTCTGAATCCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS CCA 72 bp | GCTCTCGCAGGAGCATGGCTTTGTTCCTTTGGGAGCTaGTTATCAGCGGCAGATGGGCACACACAGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: ALAGAWLCSFGS*LSAADGHTQQG Trigger: GCCCTGCTGTGTGTGCCCATCTGCCGCTGATAACCAGCTCCCAAAGGAACAAAGCCATGCTCCTGCGAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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| CDS CAA 72 bp | CACACAGGGCATGCCAGCTCTCGCAGGAGCATGGCTTaGTTCCTTTGGGAGCTGGTTATCAGCGGCAGATGG | + |
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Preference number: 6 (lower is better) Translates to: HTGHASSRRSMA*FLWELVISGRW Trigger: CCATCTGCCGCTGATAACCAGCTCCCAAAGGAACAAAGCCATGCTCCTGCGAGAGCTGGCATGCCCTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093935.3 |
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