Pregenerated sensors for KRTAP3-1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000047564

Ensembl transcript IDs: ENSMUST00000055502.5

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR GCA 90 bp	TTGATGCAAGCAGAAGCAGTTATTGAAGGGCAGGTGAAAGAGAGGATGCTGAGCGGCCGGTGGGGACACTaGAGCAGCGGGCGACACAGC	+
Preference number: 4 (lower is better) Translates to: LMQAEAVIEGQVKERMLSGRWGH*SSGRHS Trigger: GCTGTGTCGCCCGCTGCTGCAGTGTCCCCACCGGCC...GCTCAGCATCCTCTCTTTCACCTGCCCTTCAATAACTGCTTCTGCTTGCATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055502.5
CDS-3UTR TCA 90 bp	TTGATGCAAGCAGAAGCAGTTATTGAAGGGCAGGTGAAAGAGAGGATGCTGAGCTGGGCTGCAGGAGGCTaGTCTCATGTGGGCAGGTGC	+
Preference number: 4 (lower is better) Translates to: LMQAEAVIEGQVKERMLSWAAGG*SHVGRC Trigger: GCACCTGCCCACATGAGATCAGCCTCCTGCAGCCCA...GCTCAGCATCCTCTCTTTCACCTGCCCTTCAATAACTGCTTCTGCTTGCATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055502.5
CDS-3UTR TCA 90 bp	TTGATGCAAGCAGAAGCAGTTATTGAAGGGCAGGTGAAAGAGAGGATGCTGAGCCGTAGGTGGTCAGGTTaGTGCCACTCAGGCCGGGAG	+
Preference number: 4 (lower is better) Translates to: LMQAEAVIEGQVKERMLSRRWSG*CHSGRE Trigger: CTCCCGGCCTGAGTGGCATCAACCTGACCACCTACG...GCTCAGCATCCTCTCTTTCACCTGCCCTTCAATAACTGCTTCTGCTTGCATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055502.5
CDS TCA 72 bp	GACTCTCACAGCCGGGCTGCACGTAGGTGGTCAGGTTaGTGCCACTCAGGCCGGGAGTTGGGTGGCAAGAGT	+
Preference number: 6 (lower is better) Translates to: DSHSRAARRWSG*CHSGRELGGKS Trigger: ACTCTTGCCACCCAACTCCCGGCCTGAGTGGCATCAACCTGACCACCTACGTGCAGCCCGGCTGTGAGAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055502.5
CDS CAA 90 bp	GTGGTCAGGTTGATGCCACTCAGGCCGGGAGTTGGGTGGCAAGAGTaGAGCAGCCAGCAGGTTGGCACGTACACTTCAGGCTGGCAGCAG	+
Preference number: 6 (lower is better) Translates to: VVRLMPLRPGVGWQE*SSQQVGTYTSGWQQ Trigger: CTGCTGCCAGCCTGAAGTGTACGTGCCAACCTGCTGGCTGCTCAACTCTTGCCACCCAACTCCCGGCCTGAGTGGCATCAACCTGACCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055502.5
CDS CAA 72 bp	TTGATGCCACTCAGGCCGGGAGTTGGGTGGCAAGAGTaGAGCAGCCAGCAGGTTGGCACGTACACTTCAGGC	+
Preference number: 6 (lower is better) Translates to: LMPLRPGVGWQE*SSQQVGTYTSG Trigger: GCCTGAAGTGTACGTGCCAACCTGCTGGCTGCTCAACTCTTGCCACCCAACTCCCGGCCTGAGTGGCATCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055502.5

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