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Pregenerated sensors for KRTAP29-1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078254

Ensembl transcript IDs: ENSMUST00000105051.2

Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GCTGACCTTCACCTCTGGTGGGTTGATGTGACCCGCCTTGGCAGCTaGTTGGTTGGCACGAGCCAGCCTCACAGCCAGCTGGTAGACACG +
Preference number: 5 (lower is better)
Translates to: ADLHLWWVDVTRLGS*LVGTSQPHSQLVDT
Trigger: CGTGTCTACCAGCTGGCTGTGAGGCTGGCTCGTGCCAACCAACCAGCTGCCAAGGCGGGTCACATCAACCCACCAGAGGTGAAGGTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS CCA 90 bp GGCATATGTCTGGAGAGGTTGGTGGACAGCAACCAGGCCCACTGCTaGAAGGTTGACCTAAACCAGTCACACAGCAAGGGGGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: GICLERLVDSNQAHC*KVDLNQSHSKGDGR
Trigger: CCTGCCATCCCCCTTGCTGTGTGACTGGTTTAGGTCAACCTTCCAGCAGTGGGCCTGGTTGCTGTCCACCAACCTCTCCAGACATATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS GCA 90 bp CTTGGCATATGTCTGGAGAGGTTGGTGGACAGCAACCAGGCCCACTaGTGGAAGGTTGACCTAAACCAGTCACACAGCAAGGGGGATGGC +
Preference number: 5 (lower is better)
Translates to: LGICLERLVDSNQAH*WKVDLNQSHSKGDG
Trigger: GCCATCCCCCTTGCTGTGTGACTGGTTTAGGTCAACCTTCCAGCAGTGGGCCTGGTTGCTGTCCACCAACCTCTCCAGACATATGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS TCA 90 bp AGGATGAGGACTCCCACCAGTGTCAGATGCACAGCAGGCCATGTGTaGACCTATGGGTTGGCAAATAAAACCCACACAGGGAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: RMRTPTSVRCTAGHV*TYGLANKTHTGSFW
Trigger: CCAGAAACTCCCTGTGTGGGTTTTATTTGCCAACCCATAGGTTCACACATGGCCTGCTGTGCATCTGACACTGGTGGGAGTCCTCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS CCA 90 bp CCACCAGTGTCAGATGCACAGCAGGCCATGTGTGAACCTATGGGTTaGCAAATAAAACCCACACAGGGAGTTTCTGGGAAGCAGGTGGAT +
Preference number: 5 (lower is better)
Translates to: PPVSDAQQAMCEPMG*QIKPTQGVSGKQVD
Trigger: ATCCACCTGCTTCCCAGAAACTCCCTGTGTGGGTTTTATTTGCCAACCCATAGGTTCACACATGGCCTGCTGTGCATCTGACACTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS GCA 72 bp CTGATGGGCCACATGCTGTCTGGCATGACCCAGATGTaGAGGCAGATCCCTGGCCGGAGCTCTGGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: LMGHMLSGMTQM*RQIPGRSSGGR
Trigger: CCTGCCACCAGAGCTCCGGCCAGGGATCTGCCTGCACATCTGGGTCATGCCAGACAGCATGTGGCCCATCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS CCA 72 bp CACCTCTGGTGGGTTGATGTGACCCGCCTTGGCAGCTaGTTGGTTGGCACGAGCCAGCCTCACAGCCAGCTG +
Preference number: 6 (lower is better)
Translates to: HLWWVDVTRLGS*LVGTSQPHSQL
Trigger: CAGCTGGCTGTGAGGCTGGCTCGTGCCAACCAACCAGCTGCCAAGGCGGGTCACATCAACCCACCAGAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS CAA 72 bp CTCTGGTGGGTTGATGTGACCCGCCTTGGCAGCTGGTaGGTTGGCACGAGCCAGCCTCACAGCCAGCTGGTA +
Preference number: 6 (lower is better)
Translates to: LWWVDVTRLGSW*VGTSQPHSQLV
Trigger: TACCAGCTGGCTGTGAGGCTGGCTCGTGCCAACCAACCAGCTGCCAAGGCGGGTCACATCAACCCACCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS TCA 72 bp CTGACAGAGCTGACCTTCACCTCTGGTGGGTTGATGTaGCCCGCCTTGGCAGCTGGTTGGTTGGCACGAGCC +
Preference number: 6 (lower is better)
Translates to: LTELTFTSGGLM*PALAAGWLARA
Trigger: GGCTCGTGCCAACCAACCAGCTGCCAAGGCGGGTCACATCAACCCACCAGAGGTGAAGGTCAGCTCTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS TCA 72 bp GATTCCAGACAGGAGGGCTGGCATGAAGCAGCAGGATaGGGACTCCCACCAGTGTCAGATGCACAGCAGGCC +
Preference number: 6 (lower is better)
Translates to: DSRQEGWHEAAG*GLPPVSDAQQA
Trigger: GGCCTGCTGTGCATCTGACACTGGTGGGAGTCCTCATCCTGCTGCTTCATGCCAGCCCTCCTGTCTGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS CAA 90 bp CAGCCTCACAGCCAGCTGGTAGACACGGGGTCTCAGCATAGGATGTaGCTTCAGAGCAGGATGGCTGGCAGGATCTGTCATCACAGGACG +
Preference number: 6 (lower is better)
Translates to: QPHSQLVDTGSQHRM*LQSRMAGRICHHRT
Trigger: CGTCCTGTGATGACAGATCCTGCCAGCCATCCTGCTCTGAAGCAACATCCTATGCTGAGACCCCGTGTCTACCAGCTGGCTGTGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS CCA 72 bp CTGGAGAGGTTGGTGGACAGCAACCAGGCCCACTGCTaGAAGGTTGACCTAAACCAGTCACACAGCAAGGGG +
Preference number: 6 (lower is better)
Translates to: LERLVDSNQAHC*KVDLNQSHSKG
Trigger: CCCCTTGCTGTGTGACTGGTTTAGGTCAACCTTCCAGCAGTGGGCCTGGTTGCTGTCCACCAACCTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS CAA 72 bp GTCCATAGGTGCCCGCTTGGCATATGTCTGGAGAGGTaGGTGGACAGCAACCAGGCCCACTGCTGGAAGGTT +
Preference number: 6 (lower is better)
Translates to: VHRCPLGICLER*VDSNQAHCWKV
Trigger: AACCTTCCAGCAGTGGGCCTGGTTGCTGTCCACCAACCTCTCCAGACATATGCCAAGCGGGCACCTATGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS CAA 90 bp AAGAAGTGGGTCCATAGGTGCCCGCTTGGCATATGTCTGGAGAGGTaGGTGGACAGCAACCAGGCCCACTGCTGGAAGGTTGACCTAAAC +
Preference number: 6 (lower is better)
Translates to: KKWVHRCPLGICLER*VDSNQAHCWKVDLN
Trigger: GTTTAGGTCAACCTTCCAGCAGTGGGCCTGGTTGCTGTCCACCAACCTCTCCAGACATATGCCAAGCGGGCACCTATGGACCCACTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS GCA 72 bp TGTCTGGAGAGGTTGGTGGACAGCAACCAGGCCCACTaGTGGAAGGTTGACCTAAACCAGTCACACAGCAAG +
Preference number: 6 (lower is better)
Translates to: CLERLVDSNQAH*WKVDLNQSHSK
Trigger: CTTGCTGTGTGACTGGTTTAGGTCAACCTTCCAGCAGTGGGCCTGGTTGCTGTCCACCAACCTCTCCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS CCA 72 bp GGTAATAAACTGACTGACAGAGCTGACCTTCACCTCTaGTGGGTTGATGTGACCCGCCTTGGCAGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: GNKLTDRADLHL*WVDVTRLGSWL
Trigger: CAACCAGCTGCCAAGGCGGGTCACATCAACCCACCAGAGGTGAAGGTCAGCTCTGTCAGTCAGTTTATTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS CAA 90 bp CGGCAGGAACTGGGTAAACGGATAGCATTTCTAATGCTGCCACCATaGGAGCATGTAGAGATGGTGGGCACAGTTGGAACAGCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: RQELGKRIAFLMLPP*EHVEMVGTVGTAVG
Trigger: CCCCACAGCTGTTCCAACTGTGCCCACCATCTCTACATGCTCCAATGGTGGCAGCATTAGAAATGCTATCCGTTTACCCAGTTCCTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS CCA 72 bp AATAAACTGACTGACAGAGCTGACCTTCACCTCTGGTaGGTTGATGTGACCCGCCTTGGCAGCTGGTTGGTT +
Preference number: 6 (lower is better)
Translates to: NKLTDRADLHLW*VDVTRLGSWLV
Trigger: AACCAACCAGCTGCCAAGGCGGGTCACATCAACCCACCAGAGGTGAAGGTCAGCTCTGTCAGTCAGTTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS CCA 72 bp GCAGGTGGATGGACAAGAAACAGGTTCAGAGCTAACTaGGACACTGTCGGGTCCTTGACGGTTTTCTTGATG +
Preference number: 6 (lower is better)
Translates to: AGGWTRNRFRAN*DTVGSLTVFLM
Trigger: CATCAAGAAAACCGTCAAGGACCCGACAGTGTCCCAGTTAGCTCTGAACCTGTTTCTTGTCCATCCACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS CCA 72 bp TCAGATGCACAGCAGGCCATGTGTGAACCTATGGGTTaGCAAATAAAACCCACACAGGGAGTTTCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: SDAQQAMCEPMG*QIKPTQGVSGK
Trigger: CTTCCCAGAAACTCCCTGTGTGGGTTTTATTTGCCAACCCATAGGTTCACACATGGCCTGCTGTGCATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2
CDS CAA 72 bp CTGGGTAAACGGATAGCATTTCTAATGCTGCCACCATaGGAGCATGTAGAGATGGTGGGCACAGTTGGAACA +
Preference number: 6 (lower is better)
Translates to: LGKRIAFLMLPP*EHVEMVGTVGT
Trigger: TGTTCCAACTGTGCCCACCATCTCTACATGCTCCAATGGTGGCAGCATTAGAAATGCTATCCGTTTACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105051.2