Pregenerated sensors for KRTAP21-1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058368

Ensembl transcript IDs: ENSMUST00000078422.4

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	CCAGCACAGAGTTGTCAGTCATTTCTTGGGCTTGAAGGGAATAGATaGGAAATCCAGTTCAACTTGCTCTTCCACTGCTTAGTCTCTGGG	+
Preference number: 1 (lower is better) Translates to: PAQSCQSFLGLEGNR*EIQFNLLFHCLVSG Trigger: CCCAGAGACTAAGCAGTGGAAGAGCAAGTTGAACTGGATTTCCCATCTATTCCCTTCAAGCCCAAGAAATGACTGACAACTCTGTGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078422.4
3UTR CAA 90 bp	TGTGAGATGTTTTCTACTGTCCAGCACAGAGTTGTCAGTCATTTCTaGGGCTTGAAGGGAATAGATGGGAAATCCAGTTCAACTTGCTCT	+
Preference number: 2 (lower is better) Translates to: CEMFSTVQHRVVSHF*GLKGIDGKSSSTCS Trigger: AGAGCAAGTTGAACTGGATTTCCCATCTATTCCCTTCAAGCCCAAGAAATGACTGACAACTCTGTGCTGGACAGTAGAAAACATCTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078422.4
3UTR CCA 72 bp	AGTTGTCAGTCATTTCTTGGGCTTGAAGGGAATAGATaGGAAATCCAGTTCAACTTGCTCTTCCACTGCTTA	+
Preference number: 3 (lower is better) Translates to: SCQSFLGLEGNR*EIQFNLLFHCL Trigger: TAAGCAGTGGAAGAGCAAGTTGAACTGGATTTCCCATCTATTCCCTTCAAGCCCAAGAAATGACTGACAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078422.4
3UTR CAA 72 bp	TTTTCTACTGTCCAGCACAGAGTTGTCAGTCATTTCTaGGGCTTGAAGGGAATAGATGGGAAATCCAGTTCA	+
Preference number: 4 (lower is better) Translates to: FSTVQHRVVSHF*GLKGIDGKSSS Trigger: TGAACTGGATTTCCCATCTATTCCCTTCAAGCCCAAGAAATGACTGACAACTCTGTGCTGGACAGTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078422.4

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