Pregenerated sensors for KRTAP16-1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078253Ensembl transcript IDs: ENSMUST00000105050.4
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGTTGAGTGAACAAGATTCTAGCTATGTTGTAATGAGCTGTGCATaGAGCTTTCCTGGTTTCTCTCTGGCTTTTGACTCTTGTGTTGCA | + |
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Preference number: 1 (lower is better) Translates to: VLSEQDSSYVVMSCA*SFPGFSLAFDSCVA Trigger: TGCAACACAAGAGTCAAAAGCCAGAGAGAAACCAGGAAAGCTCCATGCACAGCTCATTACAACATAGCTAGAATCTTGTTCACTCAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| 3UTR GCA 90 bp | AACTTAGCCACTTTTATTGCACGATTAAATATATCTCGCTGCAGGTaGTCCCAAGGAACACAATACATGAGGACAGAAAGCATCTTGAGT | + |
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Preference number: 1 (lower is better) Translates to: NLATFIARLNISRCR*SQGTQYMRTESILS Trigger: ACTCAAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGATATATTTAATCGTGCAATAAAAGTGGCTAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| 3UTR CAA 90 bp | TGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGAAAGCATCTaGAGTAGGCAAGAGCCCAACGATGCGGCAAAGCAGTTCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: CRCSQGTQYMRTESI*SRQEPNDAAKQFSV Trigger: CACTGAGAACTGCTTTGCCGCATCGTTGGGCTCTTGCCTACTCAAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| 3UTR-3UTR CCA 90 bp | ATCTCGCTGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGAAAGCATCTTCAGTTCTCAGTGTACTaGCAACAGAAGACAACTTCC | + |
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Preference number: 2 (lower is better) Translates to: ISLQVLPRNTIHEDRKHLQFSVY*QQKTTS Trigger: GGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTG...AAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| 3UTR-3UTR TCA 90 bp | GCAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTTTCTCTGTGCTTTCTCTCTGGCTTTTaGCTCTTGTGTTGCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: AKQFSVYWQQKTTSLSLCFLSGF*LLCCRN Trigger: ATTCCTGCAACACAAGAGTCAAAAGCCAGAGAGAAA...GCACAGAGAAAGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| 3UTR GCA 72 bp | GTGTACTGGCAACAGAAGACAACTTCCCTTTCTCTGTaGAGGAGGTCTTCACTGGGACCACTAGGAGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VYWQQKTTSLSL*RRSSLGPLGGW Trigger: CCAGCCTCCTAGTGGTCCCAGTGAAGACCTCCTGCACAGAGAAAGGGAAGTTGTCTTCTGTTGCCAGTACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR GCA 90 bp | AGGCAAGAGCCCAACGATGCGGCAAAGCAGTTCTCAGTGTACTGGCAACAGAAGTCGCAAGTCACCAGCTaGCACGTCTGGCTCCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RQEPNDAAKQFSVYWQQKSQVTS*HVWLRQ Trigger: CTGCCGGAGCCAGACGTGGCAGCTGGTGACTTGCGA...CTTCTGTTGCCAGTACACTGAGAACTGCTTTGCCGCATCGTTGGGCTCTTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | ATCTCGCTGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGAAAGCATCTTGCTGGCTGCAGGCTGTaGGGCTGCAGCCTCACGGGT | + |
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Preference number: 4 (lower is better) Translates to: ISLQVLPRNTIHEDRKHLAGCRL*GCSLTG Trigger: ACCCGTGAGGCTGCAGCCCCACAGCCTGCAGCCAGC...AAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR GCA 90 bp | ATCTCGCTGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGAAAGCATCTTAGCGGTCAGCAGGCTTaGTGGCTGCAGGCTGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: ISLQVLPRNTIHEDRKHLSGQQA*WLQAVG Trigger: CCCCACAGCCTGCAGCCAGCAAGCCTGCTGACCGCT...AAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | GCAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTTTCTCTGTGCACCAGCTGCCACGTCTaGCTCCGGCAGGAGCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: AKQFSVYWQQKTTSLSLCTSCHV*LRQELG Trigger: ACCCAGCTCCTGCCGGAGCCAGACGTGGCAGCTGGT...GCACAGAGAAAGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | ATCTCGCTGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGAAAGCATCTTGGCTCACAGGGGCCCTaGACACAGCAGACAGGACGG | + |
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Preference number: 4 (lower is better) Translates to: ISLQVLPRNTIHEDRKHLGSQGP*TQQTGR Trigger: CCGTCCTGTCTGCTGTGTCCAGGGCCCCTGTGAGCC...AAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR GCA 90 bp | AGAGCCCAACGATGCGGCAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACCAGGCTGGCAGCAACTaGTCACGGAACACGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: RAQRCGKAVLSVLATEDNQAGSN*SRNTKA Trigger: AGCCTTCGTGTTCCGTGAGCAGTTGCTGCCAGCCTG...GTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTGCCGCATCGTTGGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR GCA 90 bp | GTAGGCAAGAGCCCAACGATGCGGCAAAGCAGTTCTCAGTGTACTGGCAACAGAACACGGGCTGGCAGCTaGTCACAGAACAAGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VGKSPTMRQSSSQCTGNRTRAGS*SQNKKA Trigger: AGCCTTCTTGTTCTGTGAGCAGCTGCCAGCCCGTGT...TCTGTTGCCAGTACACTGAGAACTGCTTTGCCGCATCGTTGGGCTCTTGCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR GCA 90 bp | TATATCTCGCTGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGAAAGCATAGCAGGCTTGCTGGCTaGAGGCTGTGGGGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: YISLQVLPRNTIHEDRKHSRLAG*RLWGCS Trigger: GCTGCAGCCCCACAGCCTGCAGCCAGCAAGCCTGCT...ATGCTTTCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGATATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | TGGAGCTTTCCTGGTTTCTCTCTGGCTTTTGACTCTTGTGTTGCAGGAATTGGTGGTCAGCAGGCTTGCTaGCTGCAGGCTGTGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: WSFPGFSLAFDSCVAGIGGQQAC*LQAVGL Trigger: CAGCCCCACAGCCTGCAGCCAGCAAGCCTGCTGACC...ACCAATTCCTGCAACACAAGAGTCAAAAGCCAGAGAGAAACCAGGAAAGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR TCA 90 bp | TGGAGCTTTCCTGGTTTCTCTCTGGCTTTTGACTCTTGTGTTGCAGGAATTGGTCACAGCGCAGACAGCTaGGCAGCAGCTGGGCTCACA | + |
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Preference number: 4 (lower is better) Translates to: WSFPGFSLAFDSCVAGIGHSADS*AAAGLT Trigger: TGTGAGCCCAGCTGCTGCTCAGCTGTCTGCGCTGTG...ACCAATTCCTGCAACACAAGAGTCAAAAGCCAGAGAGAAACCAGGAAAGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR TCA 90 bp | TCTCGCTGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGAAAGCATCTTGGCTGGAGACACAGCATaGGGAGTCTTGGCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SRCRCSQGTQYMRTESILAGDTA*GVLAAA Trigger: AGCAGCTGCCAAGACTCCTCATGCTGTGTCTCCAGC...CAAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR GCA 90 bp | TCTCGCTGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGAAAGCATCTTGGGCAGCAGCAGGGTTTaGAGATCACTGGCTGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: SRCRCSQGTQYMRTESILGSSRV*RSLAGK Trigger: CTTGCCAGCCAGTGATCTGCAAACCCTGCTGCTGCC...CAAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | CAACGATGCGGCAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTGGGCTCACAGATCACTaGCTGGCAGCAGCAGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: QRCGKAVLSVLATEDNFPGLTDH*LAAAGF Trigger: AAACCCTGCTGCTGCCAGCCAGTGATCTGTGAGCCC...AGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTGCCGCATCGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | GTAGGCAAGAGCCCAACGATGCGGCAAAGCAGTTCTCAGTGTACTGGCAACAGATCACAGATCATTGGTTaGCAGGAAGCAGGCACAGCG | + |
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Preference number: 4 (lower is better) Translates to: VGKSPTMRQSSSQCTGNRSQIIG*QEAGTA Trigger: CGCTGTGCCTGCTTCCTGCCAACCAATGATCTGTGA...TCTGTTGCCAGTACACTGAGAACTGCTTTGCCGCATCGTTGGGCTCTTGCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | CAAGGAACACAATACATGAGGACAGAAAGCATCTTGAGTAGGCAAGAGCCCAACGTCGGGCACACTGGCTaGCAGCAAGCAGGCTCACAC | + |
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Preference number: 4 (lower is better) Translates to: QGTQYMRTESILSRQEPNVGHTG*QQAGSH Trigger: GTGTGAGCCTGCTTGCTGCCAGCCAGTGTGCCCGAC...GTTGGGCTCTTGCCTACTCAAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | TCTCGCTGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGAAAGCATCTTGTGCAGAGCAGACAGATaGGCAGCAGCTAGGTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: SRCRCSQGTQYMRTESILCRADR*AAARCR Trigger: CCGACACCTAGCTGCTGCCCATCTGTCTGCTCTGCA...CAAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | TGGAGCTTTCCTGGTTTCTCTCTGGCTTTTGACTCTTGTGTTGCAGGAATTGGTCGGCAGCAAGCAGGTTaGCAGGAGGGAGATGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: WSFPGFSLAFDSCVAGIGRQQAG*QEGDGQ Trigger: CTGCCCATCTCCCTCCTGCCAACCTGCTTGCTGCCG...ACCAATTCCTGCAACACAAGAGTCAAAAGCCAGAGAGAAACCAGGAAAGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR TCA 90 bp | AGAGCCCAACGATGCGGCAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTCAGCGCAGTCAGGCTaGCTGGAAGTTGGCTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: RAQRCGKAVLSVLATEDNSAQSG*LEVGFL Trigger: CAAAAAGCCAACTTCCAGTCAGCCTGACTGCGCTGA...GTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTGCCGCATCGTTGGGCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | AGAGCCCAACGATGCGGCAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTCACAACACACGGGCTaGCAGCTGCTCACAGAACAA | + |
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Preference number: 4 (lower is better) Translates to: RAQRCGKAVLSVLATEDNSQHTG*QLLTEQ Trigger: TTGTTCTGTGAGCAGCTGCCAGCCCGTGTGTTGTGA...GTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTGCCGCATCGTTGGGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | CAACGATGCGGCAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTTTGCAGATCACTGGCTaGCAAGTGGCAGGCAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: QRCGKAVLSVLATEDNFPLQITG*QVAGKQ Trigger: CTGCTTGCCTGCCACTTGCCAGCCAGTGATCTGCAA...AGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTGCCGCATCGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | AGCCCAACGATGCGGCAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTGGGTTTGCAGATCACTaGCTGGCAAGTGGCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SPTMRQSSSQCTGNRRQLGFADH*LASGRQ Trigger: TTGCCTGCCACTTGCCAGCCAGTGATCTGCAAACCC...AAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTGCCGCATCGTTGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | AGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTTTCTCTGTGCAGGACTGGCTGGCAGCTACTaGCTGCAGAGCAGACAGATG | + |
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Preference number: 4 (lower is better) Translates to: SSSQCTGNRRQLPFLCAGLAGSY*LQSRQM Trigger: CATCTGTCTGCTCTGCAGCCAGTAGCTGCCAGCCAG...TCCTGCACAGAGAAAGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | CAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTTTCTCTGTGCAGCTAGAGACACATGGTaGCTCACAGGGGCCCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: QSSSQCTGNRRQLPFLCAARDTW*LTGALD Trigger: GTCCAGGGCCCCTGTGAGCCACCATGTGTCTCTAGC...TGCACAGAGAAAGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | AGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTTTCTCTGTGCAGGAGCAGGAAGGTTGGCATaGGGTAGGCACACACACCGA | + |
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Preference number: 4 (lower is better) Translates to: SSSQCTGNRRQLPFLCAGAGRLA*GRHTHR Trigger: TCGGTGTGTGTGCCTACCCCATGCCAACCTTCCTGC...TCCTGCACAGAGAAAGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR TCA 90 bp | GTTTCTCTCTGGCTTTTGACTCTTGTGTTGCAGGAATTGGTGAGCTGGAGCTGGTCACAGCACACAGGTTaGCAGCAACTGCCCATAGAG | + |
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Preference number: 4 (lower is better) Translates to: VSLWLLTLVLQELVSWSWSQHTG*QQLPIE Trigger: CTCTATGGGCAGTTGCTGTCAACCTGTGTGCTGTGA...CCAGCTCCAGCTCACCAATTCCTGCAACACAAGAGTCAAAAGCCAGAGAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR TCA 90 bp | AAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTTTCTCTGTGCAGGATACAGGCAGATGGCTaGCAAGCACTGGCCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: KQFSVYWQQKTTSLSLCRIQADG*QALASE Trigger: CTCAGAGGCCAGTGCTTGTCAGCCATCTGCCTGTAT...CCTGCACAGAGAAAGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR GCA 90 bp | TGGAGCTTTCCTGGTTTCTCTCTGGCTTTTGACTCTTGTGTTGCAGGAATTGGTCAGGTTGGGCACAGGTaGTCACAGAGCAGGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: WSFPGFSLAFDSCVAGIGQVGHR*SQSRKA Trigger: AGCCTTCCTGCTCTGTGAGCACCTGTGCCCAACCTG...ACCAATTCCTGCAACACAAGAGTCAAAAGCCAGAGAGAAACCAGGAAAGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR GCA 90 bp | TATATCTCGCTGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGAAAGCATCTGGCAGCTACTGGCTaGAGAGCAGACAGATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: YISLQVLPRNTIHEDRKHLAATG*RADRWA Trigger: TGCCCATCTGTCTGCTCTGCAGCCAGTAGCTGCCAG...ATGCTTTCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGATATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | CAAGGAACACAATACATGAGGACAGAAAGCATCTTGAGTAGGCAAGAGCCCAACTCACTGGCTGGCAAGTaGCAGGCAAGCAGAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: QGTQYMRTESILSRQEPNSLAGK*QASRGQ Trigger: CTGTCCTCTGCTTGCCTGCCACTTGCCAGCCAGTGA...GTTGGGCTCTTGCCTACTCAAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | CAACGATGCGGCAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTTTGGCAGGAGGGAGATaGGCAGGAAATAGGCTCACA | + |
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Preference number: 4 (lower is better) Translates to: QRCGKAVLSVLATEDNFPLAGGR*AGNRLT Trigger: TGTGAGCCTATTTCCTGCCCATCTCCCTCCTGCCAA...AGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTGCCGCATCGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | CAAGGAACACAATACATGAGGACAGAAAGCATCTTGAGTAGGCAAGAGCCCAACAAGCTGGTTGGCAGATaGCAGATGCCGAAGAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: QGTQYMRTESILSRQEPNKLVGR*QMPKSP Trigger: CGGGCTCTTCGGCATCTGCCATCTGCCAACCAGCTT...GTTGGGCTCTTGCCTACTCAAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR TCA 90 bp | GCAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTTTCTCTGTGCAGGCTGGGCGGTAAGTaGTGGATGTCACATATGGCT | + |
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Preference number: 4 (lower is better) Translates to: AKQFSVYWQQKTTSLSLCRLGGK*WMSHMA Trigger: AGCCATATGTGACATCCATCACTTACCGCCCAGCCT...GCACAGAGAAAGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR GCA 90 bp | ATTAAATATATCTCGCTGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGATTGGCAGATGGCAGATaGCGAAGAGCCCGGACGGCA | + |
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Preference number: 4 (lower is better) Translates to: IKYISLQVLPRNTIHEDRLADGR*RRARTA Trigger: TGCCGTCCGGGCTCTTCGGCATCTGCCATCTGCCAA...TCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGATATATTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | GGAGCTTTCCTGGTTTCTCTCTGGCTTTTGACTCTTGTGTTGCAGGAATTGGTGAAGCAGAGGACAGGCTaGCAGGATGAGGTCTCACAA | + |
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Preference number: 4 (lower is better) Translates to: GAFLVSLWLLTLVLQELVKQRTG*QDEVSQ Trigger: TTGTGAGACCTCATCCTGCCAGCCTGTCCTCTGCTT...CACCAATTCCTGCAACACAAGAGTCAAAAGCCAGAGAGAAACCAGGAAAGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | TGCTCCCAAGGAACACAATACATGAGGACAGAAAGCATCTTGAGTAGGCAAGAGTCACAGATCACTGGCTaGCAGCAGCAGGGTTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: CSQGTQYMRTESILSRQESQITG*QQQGLQ Trigger: CTGCAAACCCTGCTGCTGCCAGCCAGTGATCTGTGA...CTCTTGCCTACTCAAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTGGGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | GCAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTTTCTCTGTGCAGGCTCACAGATCATTaGTTGGCAGGAAGCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: AKQFSVYWQQKTTSLSLCRLTDH*LAGSRH Trigger: GTGCCTGCTTCCTGCCAACCAATGATCTGTGAGCCT...GCACAGAGAAAGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| 3UTR CAA 72 bp | GAGGTCTTCACTGGGACCACTAGGAGGCTGGAACTTTaGATGAGTTCTCCGAAGCATAAGCAAGTGGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: EVFTGTTRRLEL*MSSPKHKQVVS Trigger: AGACACCACTTGCTTATGCTTCGGAGAACTCATCAAAAGTTCCAGCCTCCTAGTGGTCCCAGTGAAGACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| 3UTR CAA 72 bp | TCCCAAGGAACACAATACATGAGGACAGAAAGCATCTaGAGTAGGCAAGAGCCCAACGATGCGGCAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SQGTQYMRTESI*SRQEPNDAAKQ Trigger: CTGCTTTGCCGCATCGTTGGGCTCTTGCCTACTCAAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | TGCTCCCAAGGAACACAATACATGAGGACAGAAAGCATCTTGAGTAGGCAAGAGCAGGTTGGCAGATGCTaGAGACACAGCATGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: CSQGTQYMRTESILSRQEQVGRC*RHSMRS Trigger: ACTCCTCATGCTGTGTCTCCAGCATCTGCCAACCTG...CTCTTGCCTACTCAAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTGGGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | ATTAAATATATCTCGCTGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGAGGGGCGGCAAGAAACTaGACTACAAGGCGGCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: IKYISLQVLPRNTIHEDRGAARN*TTRRLA Trigger: TGCAAGCCGCCTTGTAGTCCAGTTTCTTGCCGCCCC...TCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGATATATTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | ATCTCGCTGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGAAAGCATCTTGATGGATGTCACATATaGCTGCCTGAAGGTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ISLQVLPRNTIHEDRKHLDGCHI*LPEGDG Trigger: CCCATCACCTTCAGGCAGCCATATGTGACATCCATC...AAGATGCTTTCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | ATTAAATATATCTCGCTGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGAATGGCTGACAAGCACTaGCCTCTGAGCAAGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: IKYISLQVLPRNTIHEDRMADKH*PLSKVA Trigger: AGCCACCTTGCTCAGAGGCCAGTGCTTGTCAGCCAT...TCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGATATATTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR TCA 90 bp | AAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTTTCTCTGTGCAGCAGAACGGCATCGTTTaGCTATGTAGCAGGAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: KAVLSVLATEDNFPFSVQQNGIV*LCSRKV Trigger: AACCTTCCTGCTACATAGTCAAACGATGCCGTTCTG...CTGCACAGAGAAAGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | AGCCCAACGATGCGGCAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTAGGCTGACTGGAAGTTaGCTTTTTGCTATCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: SPTMRQSSSQCTGNRRQLRLTGS*LFAITL Trigger: AAGTGTGATAGCAAAAAGCCAACTTCCAGTCAGCCT...AAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTGCCGCATCGTTGGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CCA 90 bp | ATTAAATATATCTCGCTGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGACGCAGTCAGGCTGACTaGAAGTTGGCTTTTTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: IKYISLQVLPRNTIHEDRRSQAD*KLAFCY Trigger: ATAGCAAAAAGCCAACTTCCAGTCAGCCTGACTGCG...TCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGATATATTTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| 3UTR CAA 72 bp | GTTCTCCGAAGCATAAGCAAGTGGTGTCTGGCAGTGTaGAGTGAACAAGATTCTAGCTATGTTGTAATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLRSISKWCLAV*SEQDSSYVVMS Trigger: GCTCATTACAACATAGCTAGAATCTTGTTCACTCAACACTGCCAGACACCACTTGCTTATGCTTCGGAGAAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR GCA 90 bp | CAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTTTCTCTGTGCATGGAAGTTGGCTTTTTaGTATCACACTTATCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: QSSSQCTGNRRQLPFLCAWKLAF*YHTYRC Trigger: ACAACGATAAGTGTGATAGCAAAAAGCCAACTTCCA...TGCACAGAGAAAGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS GCA 90 bp | GAGCCACAGCCGGATGACCCACAGCTGTCCTCGCAAGTCACCAGCTaGCACGTCTGGCTCCGGCAGGAGCTGGGTAGGCAGACGGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: EPQPDDPQLSSQVTS*HVWLRQELGRQTGP Trigger: AGGGCCCGTCTGCCTACCCAGCTCCTGCCGGAGCCAGACGTGGCAGCTGGTGACTTGCGAGGACAGCTGTGGGTCATCCGGCTGTGGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS TCA 90 bp | GGGGCTGGCAGGTTTGATCTCAGAGGGCTGGCAGGGAGTCTCATCTaGGACCTCTGTCTTGACAGGTGTCGAGTCAGCGCAGTCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GAGRFDLRGLAGSLI*DLCLDRCRVSAVRL Trigger: CAGCCTGACTGCGCTGACTCGACACCTGTCAAGACAGAGGTCTCAGATGAGACTCCCTGCCAGCCCTCTGAGATCAAACCTGCCAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS CCA 90 bp | TTGGTTGGCAGGAAGCAGGCACAGCGCAGACAGCTGAGCAGCAGCTaGGCTCACAGATCACTGGCTGGCAGCAGCAGGGTTTGCAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: LVGRKQAQRRQLSSS*AHRSLAGSSRVCRS Trigger: TGATCTGCAAACCCTGCTGCTGCCAGCCAGTGATCTGTGAGCCCAGCTGCTGCTCAGCTGTCTGCGCTGTGCCTGCTTCCTGCCAACCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS CCA 90 bp | GCAGAGCAGACAGATGGGCAGCAGCTAGGTGTCGGGCACACTGGCTaGCAGCAAGCAGGCTCACACACCACAGGCTCACAGATCATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AEQTDGQQLGVGHTG*QQAGSHTTGSQIIG Trigger: ACCAATGATCTGTGAGCCTGTGGTGTGTGAGCCTGCTTGCTGCCAGCCAGTGTGCCCGACACCTAGCTGCTGCCCATCTGTCTGCTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS CCA 90 bp | GGGCAGACAGGTTGGCAGATGCTGGAGACACAGCATGAGGAGTCTTaGCAGCTGCTAGAGACACATGGTGGCTCACAGGGGCCCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GQTGWQMLETQHEES*QLLETHGGSQGPWT Trigger: TGTCCAGGGCCCCTGTGAGCCACCATGTGTCTCTAGCAGCTGCCAAGACTCCTCATGCTGTGTCTCCAGCATCTGCCAACCTGTCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS CCA 90 bp | GCAGCCTCACGGGTGATGGGGCTGGCAGGTTTGATCTCAGAGGGCTaGCAGGGAGTCTCATCTGAGACCTCTGTCTTGACAGGTGTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: AASRVMGLAGLISEG*QGVSSETSVLTGVE Trigger: CTCGACACCTGTCAAGACAGAGGTCTCAGATGAGACTCCCTGCCAGCCCTCTGAGATCAAACCTGCCAGCCCCATCACCCGTGAGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CAA 90 bp | AGGCAAGAGCCCAACGATGCGGCAAAGCAGTTCTCAGTGTACTGGCAACAGAAGCAGCGGTCAGCAGGCTaGCTGGCTGCAGGCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RQEPNDAAKQFSVYWQQKQRSAG*LAAGCG Trigger: CCCACAGCCTGCAGCCAGCAAGCCTGCTGACCGCTG...CTTCTGTTGCCAGTACACTGAGAACTGCTTTGCCGCATCGTTGGGCTCTTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS TCA 90 bp | ACATACCAGAGCCATACAGGCAGATGGCTGACAAGCACTGGCCTCTaGGCAAGGTGGCTCGCAGGGACTGGTTTCACAGCCGACTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TYQSHTGRWLTSTGL*ARWLAGTGFTADWL Trigger: CAGCCAGTCGGCTGTGAAACCAGTCCCTGCGAGCCACCTTGCTCAGAGGCCAGTGCTTGTCAGCCATCTGCCTGTATGGCTCTGGTATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS TCA 90 bp | CGGAGACAAACAGGCTCACATACCAGAGCCATACAGGCAGATGGCTaGCAAGCACTGGCCTCTGAGCAAGGTGGCTCGCAGGGACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RRQTGSHTRAIQADG*QALASEQGGSQGLV Trigger: AACCAGTCCCTGCGAGCCACCTTGCTCAGAGGCCAGTGCTTGTCAGCCATCTGCCTGTATGGCTCTGGTATGTGAGCCTGTTTGTCTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CAA 90 bp | GTAGGCAAGAGCCCAACGATGCGGCAAAGCAGTTCTCAGTGTACTGGCAACAGATCTGAGACCTCTGTCTaGACAGGTGTCGAGTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: VGKSPTMRQSSSQCTGNRSETSV*TGVESA Trigger: CGCTGACTCGACACCTGTCAAGACAGAGGTCTCAGA...TCTGTTGCCAGTACACTGAGAACTGCTTTGCCGCATCGTTGGGCTCTTGCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CAA 90 bp | CAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTTTCTCTGTGCAATGGGGCTGGCAGGTTaGATCTCAGAGGGCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QSSSQCTGNRRQLPFLCAMGLAG*ISEGWQ Trigger: CTGCCAGCCCTCTGAGATCAAACCTGCCAGCCCCAT...TGCACAGAGAAAGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CAA 90 bp | GCAAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTTTCTCTGTGCCTCACAGCACACAGGTaGAGCACAGCTGCTCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: AKQFSVYWQQKTTSLSLCLTAHR*STAAHR Trigger: TCTGTGAGCAGCTGTGCTCAACCTGTGTGCTGTGAG...GCACAGAGAAAGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CAA 90 bp | AAAGCAGTTCTCAGTGTACTGGCAACAGAAGACAACTTCCCTTTCTCTGTGCAGTGGCAGCAGCAGGGTTaGCAGATCACTGGCTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KAVLSVLATEDNFPFSVQWQQQG*QITGWQ Trigger: TTGCCAGCCAGTGATCTGCAAACCCTGCTGCTGCCA...CTGCACAGAGAAAGGGAAGTTGTCTTCTGTTGCCAGTACACTGAGAACTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CAA 90 bp | TGTGCATGGAGCTTTCCTGGTTTCTCTCTGGCTTTTGACTCTTGTGTTGCAGGACTCACAGCACACAGGTaGACAGCAACTGCCCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: CAWSFPGFSLAFDSCVAGLTAHR*TATAHR Trigger: TCTATGGGCAGTTGCTGTCAACCTGTGTGCTGTGAG...TCCTGCAACACAAGAGTCAAAAGCCAGAGAGAAACCAGGAAAGCTCCATGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CAA 90 bp | ATTAAATATATCTCGCTGCAGGTGCTCCCAAGGAACACAATACATGAGGACAGACTCACAGCACACAGGTaGGGCACAGGTGCTCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: IKYISLQVLPRNTIHEDRLTAHR*GTGAHR Trigger: TCTGTGAGCACCTGTGCCCAACCTGTGTGCTGTGAG...TCTGTCCTCATGTATTGTGTTCCTTGGGAGCACCTGCAGCGAGATATATTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS-3UTR CAA 90 bp | TTTCCTGGTTTCTCTCTGGCTTTTGACTCTTGTGTTGCAGGAATTGGTGAGCTGTATGTAGCAGGAAGGTaGGCATGGGGTAGGCACACA | + |
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Preference number: 5 (lower is better) Translates to: FPGFSLAFDSCVAGIGELYVAGR*AWGRHT Trigger: TGTGTGCCTACCCCATGCCAACCTTCCTGCTACATA...CAGCTCACCAATTCCTGCAACACAAGAGTCAAAAGCCAGAGAGAAACCAGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS CCA 72 bp | CCACAGCTGTCCTCGCAAGTCACCAGCTGCCACGTCTaGCTCCGGCAGGAGCTGGGTAGGCAGACGGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PQLSSQVTSCHV*LRQELGRQTGP Trigger: AGGGCCCGTCTGCCTACCCAGCTCCTGCCGGAGCCAGACGTGGCAGCTGGTGACTTGCGAGGACAGCTGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS GCA 72 bp | CCGGATGACCCACAGCTGTCCTCGCAAGTCACCAGCTaGCACGTCTGGCTCCGGCAGGAGCTGGGTAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PDDPQLSSQVTS*HVWLRQELGRQ Trigger: CTGCCTACCCAGCTCCTGCCGGAGCCAGACGTGGCAGCTGGTGACTTGCGAGGACAGCTGTGGGTCATCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS CCA 72 bp | AAGTCACCAGCTGCCACGTCTGGCTCCGGCAGGAGCTaGGTAGGCAGACGGGCCCTCCACAGCTCACCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KSPAATSGSGRS*VGRRALHSSPQ Trigger: CTGAGGTGAGCTGTGGAGGGCCCGTCTGCCTACCCAGCTCCTGCCGGAGCCAGACGTGGCAGCTGGTGACTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS CCA 72 bp | GCAGACAGATGGGCAGCAGCTAGGTGTCGGGCACACTaGCTGGCAGCAAGCAGGCTCACACACCACAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ADRWAAARCRAH*LAASRLTHHRL Trigger: GAGCCTGTGGTGTGTGAGCCTGCTTGCTGCCAGCCAGTGTGCCCGACACCTAGCTGCTGCCCATCTGTCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS CAA 72 bp | GGGGCTGCAGCCTCACGGGTGATGGGGCTGGCAGGTTaGATCTCAGAGGGCTGGCAGGGAGTCTCATCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GAAASRVMGLAG*ISEGWQGVSSE Trigger: CTCAGATGAGACTCCCTGCCAGCCCTCTGAGATCAAACCTGCCAGCCCCATCACCCGTGAGGCTGCAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS CAA 90 bp | GCAGGCTGTGGGGCTGCAGCCTCACGGGTGATGGGGCTGGCAGGTTaGATCTCAGAGGGCTGGCAGGGAGTCTCATCTGAGACCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: AGCGAAASRVMGLAG*ISEGWQGVSSETSV Trigger: GACAGAGGTCTCAGATGAGACTCCCTGCCAGCCCTCTGAGATCAAACCTGCCAGCCCCATCACCCGTGAGGCTGCAGCCCCACAGCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS CCA 72 bp | ACAGATGGGCAGCAGCTAGGTGTCGGGCACACTGGCTaGCAGCAAGCAGGCTCACACACCACAGGCTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: TDGQQLGVGHTG*QQAGSHTTGSQ Trigger: CTGTGAGCCTGTGGTGTGTGAGCCTGCTTGCTGCCAGCCAGTGTGCCCGACACCTAGCTGCTGCCCATCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS CCA 72 bp | GCAGGAAGGTTGGCATGGGGTAGGCACACACACCGATaGCAGGCAAGGACTAGGCTCAGGGCAGACAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AGRLAWGRHTHR*QARTRLRADRL Trigger: CAACCTGTCTGCCCTGAGCCTAGTCCTTGCCTGCCATCGGTGTGTGTGCCTACCCCATGCCAACCTTCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS CAA 72 bp | CTGGGCTCACAGATCACTGGCTGGCAGCAGCAGGGTTaGCAGATCACTGGCTGGCAAGTGGCAGGCAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGSQITGWQQQG*QITGWQVAGKQ Trigger: CTGCTTGCCTGCCACTTGCCAGCCAGTGATCTGCAAACCCTGCTGCTGCCAGCCAGTGATCTGTGAGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS TCA 72 bp | AGGGCTGGCAGGGAGTCTCATCTGAGACCTCTGTCTTaGCAGGTGTCGAGTCAGCGCAGTCAGGCTGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: RAGRESHLRPLS*QVSSQRSQADW Trigger: CCAGTCAGCCTGACTGCGCTGACTCGACACCTGTCAAGACAGAGGTCTCAGATGAGACTCCCTGCCAGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS GCA 72 bp | GGCAGGATGAGGTCTCACAACACACGGGCTGGCAGCTaGTCACAGAACAAGAAGGCTGGCACATGGTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRMRSHNTRAGS*SQNKKAGTWWP Trigger: AGGCCACCATGTGCCAGCCTTCTTGTTCTGTGAGCAGCTGCCAGCCCGTGTGTTGTGAGACCTCATCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS TCA 72 bp | ACAGGCTCACATACCAGAGCCATACAGGCAGATGGCTaGCAAGCACTGGCCTCTGAGCAAGGTGGCTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TGSHTRAIQADG*QALASEQGGSQ Trigger: CTGCGAGCCACCTTGCTCAGAGGCCAGTGCTTGTCAGCCATCTGCCTGTATGGCTCTGGTATGTGAGCCTGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS CCA 72 bp | CGGGTGATGGGGCTGGCAGGTTTGATCTCAGAGGGCTaGCAGGGAGTCTCATCTGAGACCTCTGTCTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: RVMGLAGLISEG*QGVSSETSVLT Trigger: TGTCAAGACAGAGGTCTCAGATGAGACTCCCTGCCAGCCCTCTGAGATCAAACCTGCCAGCCCCATCACCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS TCA 72 bp | AGGTTTGATCTCAGAGGGCTGGCAGGGAGTCTCATCTaGGACCTCTGTCTTGACAGGTGTCGAGTCAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: RFDLRGLAGSLI*DLCLDRCRVSA Trigger: TGCGCTGACTCGACACCTGTCAAGACAGAGGTCTCAGATGAGACTCCCTGCCAGCCCTCTGAGATCAAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS CAA 72 bp | GACAGAACGGCATCGTTTGACTATGTAGCAGGAAGGTaGGCATGGGGTAGGCACACACACCGATGGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: DRTASFDYVAGR*AWGRHTHRWQA Trigger: TGCCTGCCATCGGTGTGTGTGCCTACCCCATGCCAACCTTCCTGCTACATAGTCAAACGATGCCGTTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS TCA 72 bp | TCTGTCTTGACAGGTGTCGAGTCAGCGCAGTCAGGCTaGCTGGAAGTTGGCTTTTTGCTATCACACTTATCG | + |
|
Preference number: 6 (lower is better) Translates to: SVLTGVESAQSG*LEVGFLLSHLS Trigger: CGATAAGTGTGATAGCAAAAAGCCAACTTCCAGTCAGCCTGACTGCGCTGACTCGACACCTGTCAAGACAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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| CDS GCA 72 bp | AGTCAGCGCAGTCAGGCTGACTGGAAGTTGGCTTTTTaGTATCACACTTATCGTTGTCAGAATCAGTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: SQRSQADWKLAF*YHTYRCQNQCM Trigger: CATGCACTGATTCTGACAACGATAAGTGTGATAGCAAAAAGCCAACTTCCAGTCAGCCTGACTGCGCTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105050.4 |
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