RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KRTAP15 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022931

Ensembl transcript IDs: ENSMUST00000023648.6, ENSMUST00000187823.2

Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCCAAAAATAATTTGCTTCCAGGTGTATCACGATGCTGAGTCCTaGGGAGACAAACACTCATTGATCAATCCTAAATGTTGGCGAAGA +
Preference number: 1 (lower is better)
Translates to: PPKIICFQVYHDAES*GDKHSLINPKCWRR
Trigger: TCTTCGCCAACATTTAGGATTGATCAATGAGTGTTTGTCTCCCCAGGACTCAGCATCGTGATACACCTGGAAGCAAATTATTTTTGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
3UTR-3UTR CCA 90 bp CTTCATCCTCCAAAAATAATTTGCTTCCAGGTGTATCACGATGCTGAGTCCTGGATCAATCCTAAATGTTaGCGAAGACATTTGAGTTCC +
Preference number: 2 (lower is better)
Translates to: LHPPKIICFQVYHDAESWINPKC*RRHLSS
Trigger: GGAACTCAAATGTCTTCGCCAACATTTAGGATTGAT...CCAGGACTCAGCATCGTGATACACCTGGAAGCAAATTATTTTTGGAGGATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
3UTR TCA 72 bp TCCAAAAATAATTTGCTTCCAGGTGTATCACGATGCTaGGTCCTGGGGAGACAAACACTCATTGATCAATCC +
Preference number: 3 (lower is better)
Translates to: SKNNLLPGVSRC*VLGRQTLIDQS
Trigger: GGATTGATCAATGAGTGTTTGTCTCCCCAGGACTCAGCATCGTGATACACCTGGAAGCAAATTATTTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
3UTR-3UTR CAA 90 bp GAAAGAAGTGATCCAAGCATTTACATAATAGTTGCAATGCTAGCTCTCTATTGTTCCTCCAAAAATAATTaGCTTCCAGGTGTATCACGA +
Preference number: 3 (lower is better)
Translates to: ERSDPSIYIIVAMLALYCSSKNN*LPGVSR
Trigger: TCGTGATACACCTGGAAGCAAATTATTTTTGGAGGA...ACAATAGAGAGCTAGCATTGCAACTATTATGTAAATGCTTGGATCACTTCTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS-3UTR CCA 90 bp GTAGTAGAGTTGAAAGGTCAAAGGCAGGTTAAAGGTCAAGGTTACTTCATCCTCCCCACACAGGGCAAGTaGCCTTCAAGTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VVELKGQRQVKGQGYFILPTQGK*PSSGSL
Trigger: CAGTGAGCCACTTGAAGGCCACTTGCCCTGTGTGGG...GAGGATGAAGTAACCTTGACCTTTAACCTGCCTTTGACCTTTCAACTCTACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS-3UTR TCA 90 bp TATCACGATGCTGAGTCCTGGGGAGACAAACACTCATTGATCAATCCTAAATGTTTGGATCCACAGCCCTaGGAGCGAATGCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: YHDAESWGDKHSLINPKCLDPQP*ERMPEL
Trigger: AAGCTCTGGCATTCGCTCTCAGGGCTGTGGATCCAA...ACATTTAGGATTGATCAATGAGTGTTTGTCTCCCCAGGACTCAGCATCGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS-3UTR GCA 90 bp GATGCTGAGTCCTGGGGAGACAAACACTCATTGATCAATCCTAAATGTTGGCGAGGGCTGGAGAAGTATTaGTTAGGCCGGAAACAGGAT +
Preference number: 4 (lower is better)
Translates to: DAESWGDKHSLINPKCWRGLEKY*LGRKQD
Trigger: ATCCTGTTTCCGGCCTAAGCAATACTTCTCCAGCCC...TCGCCAACATTTAGGATTGATCAATGAGTGTTTGTCTCCCCAGGACTCAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS-3UTR CCA 90 bp CAGGTGTATCACGATGCTGAGTCCTGGGGAGACAAACACTCATTGATCAATCCTAGACTACATTGCTGGTaGGGTAGAAGGAGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: QVYHDAESWGDKHSLINPRLHCW*GRRSCR
Trigger: CCTACAACTCCTTCTACCCCACCAGCAATGTAGTCT...AGGATTGATCAATGAGTGTTTGTCTCCCCAGGACTCAGCATCGTGATACACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS-3UTR GCA 90 bp ATAGTTGCAATGCTAGCTCTCTATTGTAGTAGAGTTGAAAGGTCAAAGGCAGGTGGATGTGTGGAAGGATaGAGACCCCACACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: IVAMLALYCSRVERSKAGGCVEG*RPHTGQ
Trigger: TTGCCCTGTGTGGGGTCTGCATCCTTCCACACATCC...ACCTGCCTTTGACCTTTCAACTCTACTACAATAGAGAGCTAGCATTGCAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS-3UTR GCA 90 bp GATGCTGAGTCCTGGGGAGACAAACACTCATTGATCAATCCTAAATGTTGGCGACTCCAAAGCCAGTATTaGCATATCCAAAAGATCCGG +
Preference number: 4 (lower is better)
Translates to: DAESWGDKHSLINPKCWRLQSQY*HIQKIR
Trigger: CCGGATCTTTTGGATATGGCAATACTGGCTTTGGAG...TCGCCAACATTTAGGATTGATCAATGAGTGTTTGTCTCCCCAGGACTCAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS-3UTR CCA 90 bp ATTGTAGTAGAGTTGAAAGGTCAAAGGCAGGTTAAAGGTCAAGGTTACTTCATCCTGGACGGTAGAAGTTaGATCCACAGCCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: IVVELKGQRQVKGQGYFILDGRS*IHSPES
Trigger: GCTCTCAGGGCTGTGGATCCAACTTCTACCGTCCAG...GATGAAGTAACCTTGACCTTTAACCTGCCTTTGACCTTTCAACTCTACTACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS-3UTR CCA 90 bp ATTGTAGTAGAGTTGAAAGGTCAAAGGCAGGTTAAAGGTCAAGGTTACTTCATCCAAGTGGCCTTCAAGTaGCTCACTGAAGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IVVELKGQRQVKGQGYFIQVAFK*LTEGLL
Trigger: CAGGAGACCTTCAGTGAGCCACTTGAAGGCCACTTG...GATGAAGTAACCTTGACCTTTAACCTGCCTTTGACCTTTCAACTCTACTACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
3UTR CAA 72 bp TATCACGATGCTGAGTCCTGGGGAGACAAACACTCATaGATCAATCCTAAATGTTGGCGAAGACATTTGAGT +
Preference number: 4 (lower is better)
Translates to: YHDAESWGDKHS*INPKCWRRHLS
Trigger: ACTCAAATGTCTTCGCCAACATTTAGGATTGATCAATGAGTGTTTGTCTCCCCAGGACTCAGCATCGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS-3UTR GCA 90 bp GAAAGAAGTGATCCAAGCATTTACATAATAGTTGCAATGCTAGCTCTCTATTGTAGCCCTGAGAGCGAATaGCAGAGCTTCCAAACCCAA +
Preference number: 4 (lower is better)
Translates to: ERSDPSIYIIVAMLALYCSPESE*QSFQTQ
Trigger: TTGGGTTTGGAAGCTCTGGCATTCGCTCTCAGGGCT...ACAATAGAGAGCTAGCATTGCAACTATTATGTAAATGCTTGGATCACTTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS CCA 90 bp TGGCAGGGGCTGGAGAAGTATTGCTTAGGCCGGAAACAGGATGTGTaGAAGGATGCAGACCCCACACAGGGCAAGTGGCCTTCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: WQGLEKYCLGRKQDV*KDADPTQGKWPSSG
Trigger: GCCACTTGAAGGCCACTTGCCCTGTGTGGGGTCTGCATCCTTCCACACATCCTGTTTCCGGCCTAAGCAATACTTCTCCAGCCCCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS TCA 90 bp AGGATGCAGACCCCACACAGGGCAAGTGGCCTTCAAGTGGCTCACTaGAGGTCTCCTGCTGTCCATTGTAGAAAGAGGATCCCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: RMQTPHRASGLQVAH*RSPAVHCRKRIPAG
Trigger: TCCAGCTGGGATCCTCTTTCTACAATGGACAGCAGGAGACCTTCAGTGAGCCACTTGAAGGCCACTTGCCCTGTGTGGGGTCTGCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS GCA 90 bp GCTGGAGAAGTATTGCTTAGGCCGGAAACAGGATGTGTGGAAGGATaGAGACCCCACACAGGGCAAGTGGCCTTCAAGTGGCTCACTGAA +
Preference number: 5 (lower is better)
Translates to: AGEVLLRPETGCVEG*RPHTGQVAFKWLTE
Trigger: TTCAGTGAGCCACTTGAAGGCCACTTGCCCTGTGTGGGGTCTGCATCCTTCCACACATCCTGTTTCCGGCCTAAGCAATACTTCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS CCA 90 bp TGTGTGGAAGGATGCAGACCCCACACAGGGCAAGTGGCCTTCAAGTaGCTCACTGAAGGTCTCCTGCTGTCCATTGTAGAAAGAGGATCC +
Preference number: 5 (lower is better)
Translates to: CVEGCRPHTGQVAFK*LTEGLLLSIVERGS
Trigger: GGATCCTCTTTCTACAATGGACAGCAGGAGACCTTCAGTGAGCCACTTGAAGGCCACTTGCCCTGTGTGGGGTCTGCATCCTTCCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS-3UTR CAA 90 bp GTAGTAGAGTTGAAAGGTCAAAGGCAGGTTAAAGGTCAAGGTTACTTCATCCTCCCAGCTGGAAGTTCTTaGGAGAATAGACTACATTGC +
Preference number: 5 (lower is better)
Translates to: VVELKGQRQVKGQGYFILPAGSS*ENRLHC
Trigger: GCAATGTAGTCTATTCTCCAAAGAACTTCCAGCTGG...GAGGATGAAGTAACCTTGACCTTTAACCTGCCTTTGACCTTTCAACTCTACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS-3UTR CAA 90 bp GAAAGAAGTGATCCAAGCATTTACATAATAGTTGCAATGCTAGCTCTCTATTGTGCTCCAAAGCCAGTATaGCCATATCCAAAAGATCCG +
Preference number: 5 (lower is better)
Translates to: ERSDPSIYIIVAMLALYCAPKPV*PYPKDP
Trigger: CGGATCTTTTGGATATGGCAATACTGGCTTTGGAGC...ACAATAGAGAGCTAGCATTGCAACTATTATGTAAATGCTTGGATCACTTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS CCA 72 bp GATGTGTGGAAGGATGCAGACCCCACACAGGGCAAGTaGCCTTCAAGTGGCTCACTGAAGGTCTCCTGCTGT +
Preference number: 6 (lower is better)
Translates to: DVWKDADPTQGK*PSSGSLKVSCC
Trigger: ACAGCAGGAGACCTTCAGTGAGCCACTTGAAGGCCACTTGCCCTGTGTGGGGTCTGCATCCTTCCACACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS CAA 72 bp TCCGGTAAAGCCTCCCTGGCAGGGGCTGGAGAAGTATaGCTTAGGCCGGAAACAGGATGTGTGGAAGGATGC +
Preference number: 6 (lower is better)
Translates to: SGKASLAGAGEV*LRPETGCVEGC
Trigger: GCATCCTTCCACACATCCTGTTTCCGGCCTAAGCAATACTTCTCCAGCCCCTGCCAGGGAGGCTTTACCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS GCA 72 bp GTATTGCTTAGGCCGGAAACAGGATGTGTGGAAGGATaGAGACCCCACACAGGGCAAGTGGCCTTCAAGTGG +
Preference number: 6 (lower is better)
Translates to: VLLRPETGCVEG*RPHTGQVAFKW
Trigger: CCACTTGAAGGCCACTTGCCCTGTGTGGGGTCTGCATCCTTCCACACATCCTGTTTCCGGCCTAAGCAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS CCA 72 bp GGATGCAGACCCCACACAGGGCAAGTGGCCTTCAAGTaGCTCACTGAAGGTCTCCTGCTGTCCATTGTAGAA +
Preference number: 6 (lower is better)
Translates to: GCRPHTGQVAFK*LTEGLLLSIVE
Trigger: TTCTACAATGGACAGCAGGAGACCTTCAGTGAGCCACTTGAAGGCCACTTGCCCTGTGTGGGGTCTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS CCA 72 bp CTGGAGAAGTATTGCTTAGGCCGGAAACAGGATGTGTaGAAGGATGCAGACCCCACACAGGGCAAGTGGCCT +
Preference number: 6 (lower is better)
Translates to: LEKYCLGRKQDV*KDADPTQGKWP
Trigger: AGGCCACTTGCCCTGTGTGGGGTCTGCATCCTTCCACACATCCTGTTTCCGGCCTAAGCAATACTTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS CCA 72 bp GTATTGCCATATCCAAAAGATCCGGTAAAGCCTCCCTaGCAGGGGCTGGAGAAGTATTGCTTAGGCCGGAAA +
Preference number: 6 (lower is better)
Translates to: VLPYPKDPVKPP*QGLEKYCLGRK
Trigger: TTTCCGGCCTAAGCAATACTTCTCCAGCCCCTGCCAGGGAGGCTTTACCGGATCTTTTGGATATGGCAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS CAA 72 bp CCAGAGCTTCCAAACCCAAAAGCTCCAAAGCCAGTATaGCCATATCCAAAAGATCCGGTAAAGCCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: PELPNPKAPKPV*PYPKDPVKPPW
Trigger: CCAGGGAGGCTTTACCGGATCTTTTGGATATGGCAATACTGGCTTTGGAGCTTTTGGGTTTGGAAGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS CAA 72 bp GTCCATTGTAGAAAGAGGATCCCAGCTGGAAGTTCTTaGGAGAATAGACTACATTGCTGGTGGGGTAGAAGG +
Preference number: 6 (lower is better)
Translates to: VHCRKRIPAGSS*ENRLHCWWGRR
Trigger: CCTTCTACCCCACCAGCAATGTAGTCTATTCTCCAAAGAACTTCCAGCTGGGATCCTCTTTCTACAATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS TCA 72 bp AGAGACTGGCTGCCTCAAGAAACCTCCAAAAGACTGTaGGGAGTAGTTTCCAGAGTTGCAAGTGTAAGACAT +
Preference number: 6 (lower is better)
Translates to: RDWLPQETSKRL*GVVSRVASVRH
Trigger: ATGTCTTACACTTGCAACTCTGGAAACTACTCCTCACAGTCTTTTGGAGGTTTCTTGAGGCAGCCAGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000187823.2
CDS CAA 72 bp CCAGAGCTTCCAAACCCAAAAGCTCCAAAGCCAGTATaGCCATATCCAAAAGATCCGGTAAAGCCTCCAAAA +
Preference number: 6 (lower is better)
Translates to: PELPNPKAPKPV*PYPKDPVKPPK
Trigger: TTTTGGAGGCTTTACCGGATCTTTTGGATATGGCAATACTGGCTTTGGAGCTTTTGGGTTTGGAAGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023648.6