Pregenerated sensors for KRTAP14 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074928

Ensembl transcript IDs: ENSMUST00000189774.2

Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 72 bp	CAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTaGGTAATTACTAAGAGATATGCGAAGAAAGAATTA	+
Preference number: 3 (lower is better) Translates to: QPSSLQKSRPEV*VITKRYAKKEL Trigger: TAATTCTTTCTTCGCATATCTCTTAGTAATTACTCAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR TCA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGGGATCCCGAGAAAGTTaGCTGGCAGGGCCTGCAGGG	+
Preference number: 4 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLGSRES*LAGPAG Trigger: CCCTGCAGGCCCTGCCAGTCAACTTTCTCGGGATCC...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR CCA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGCCCGAGAAAGTTGACTaGCAGGGCCTGCAGGGCCCT	+
Preference number: 4 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLPEKVD*QGLQGP Trigger: AGGGCCCTGCAGGCCCTGCCAGTCAACTTTCTCGGG...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR TCA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGAGCCCAGCTGGTGGGTaGTGGGAGTTTGGAGGTCAG	+
Preference number: 4 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLSPAGG*WEFGGQ Trigger: CTGACCTCCAAACTCCCATCACCCACCAGCTGGGCT...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR TCA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGTCCTGGCACCCACTGTaGAGAGAAGAGCCCAGCTGG	+
Preference number: 4 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLSWHPL*REEPSW Trigger: CCAGCTGGGCTCTTCTCTTCACAGTGGGTGCCAGGA...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR GCA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGTTGACTGGCAGGGCCTaGAGGGCCCTCGAATCCTCT	+
Preference number: 4 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLLTGRA*RALESS Trigger: AGAGGATTCGAGGGCCCTGCAGGCCCTGCCAGTCAA...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR CCA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGGCCTCTGGCAGGGTCTaGAGACCACATAGGCTGTCT	+
Preference number: 4 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLASGRV*RPHRLS Trigger: AGACAGCCTATGTGGTCTCCAGACCCTGCCAGAGGC...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR CCA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGTGGCCCCCAAAGGACTaGGAGAAAGTTCCAGAGCAG	+
Preference number: 4 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLWPPKD*EKVPEQ Trigger: CTGCTCTGGAACTTTCTCCCAGTCCTTTGGGGGCCA...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR CCA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGATCGGATACTGCAGTTaGCCCCCAAAGGACTGGGAG	+
Preference number: 4 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLIGYCS*PPKDWE Trigger: CTCCCAGTCCTTTGGGGGCCAACTGCAGTATCCGAT...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR CCA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGAGAGAAGAGCCCAGCTaGTGGGTGATGGGAGTTTGG	+
Preference number: 4 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLREEPS*WVMGVW Trigger: CCAAACTCCCATCACCCACCAGCTGGGCTCTTCTCT...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR GCA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGGAAGAGATCGGATACTaGAGTTGGCCCCCAAAGGAC	+
Preference number: 4 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLEEIGY*SWPPKD Trigger: GTCCTTTGGGGGCCAACTGCAGTATCCGATCTCTTC...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR CCA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGTCCAAAGCCCTGGGATaGGTAGCCACAGCCAAAAGA	+
Preference number: 4 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLSKALG*VATAKR Trigger: TCTTTTGGCTGTGGCTACCCATCCCAGGGCTTTGGA...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR CCA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGGCCAGTCCCACAGGTTaGCTGATAAGAAACAGACTG	+
Preference number: 4 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLASPTG*LIRNRL Trigger: CAGTCTGTTTCTTATCAGCCAACCTGTGGGACTGGC...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR CCA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGCCACAGCCAAAAGACTaGAAACCCCTGGAACCAAAT	+
Preference number: 4 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLPQPKD*KPLEPN Trigger: ATTTGGTTCCAGGGGTTTCCAGTCTTTTGGCTGTGG...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR CCA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGCCACATCCTACTGACTaGAAACCATGGGATCCAAAG	+
Preference number: 4 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLPHPTD*KPWDPK Trigger: CTTTGGATCCCATGGTTTCCAGTCAGTAGGATGTGG...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR CCA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGTTGGGCGGTAAAAGCTaGATCCACAATTTAGGGATG	+
Preference number: 4 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLLGGKS*IHNLGM Trigger: CATCCCTAAATTGTGGATCCAGCTTTTACCGCCCAA...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS CCA 90 bp	GCCTCTGGCAGGGTCTGGAGACCACATAGGCTGTCTGGCAGTTGGTaGGCTCACAGAAGGTTTCCTGGCACCCACTGTGAAGAGAAGAGC	+
Preference number: 5 (lower is better) Translates to: ASGRVWRPHRLSGSW*AHRRFPGTHCEEKS Trigger: GCTCTTCTCTTCACAGTGGGTGCCAGGAAACCTTCTGTGAGCCCACCAACTGCCAGACAGCCTATGTGGTCTCCAGACCCTGCCAGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS CCA 90 bp	AGGGCCCTCGAATCCTCTGACTGTAGAAAGGCCTCTGGCAGGGTCTaGAGACCACATAGGCTGTCTGGCAGTTGGTGGGCTCACAGAAGG	+
Preference number: 5 (lower is better) Translates to: RALESSDCRKASGRV*RPHRLSGSWWAHRR Trigger: CCTTCTGTGAGCCCACCAACTGCCAGACAGCCTATGTGGTCTCCAGACCCTGCCAGAGGCCTTTCTACAGTCAGAGGATTCGAGGGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS CCA 90 bp	AAGGCCTCTGGCAGGGTCTGGAGACCACATAGGCTGTCTGGCAGTTaGTGGGCTCACAGAAGGTTTCCTGGCACCCACTGTGAAGAGAAG	+
Preference number: 5 (lower is better) Translates to: KASGRVWRPHRLSGS*WAHRRFPGTHCEEK Trigger: CTTCTCTTCACAGTGGGTGCCAGGAAACCTTCTGTGAGCCCACCAACTGCCAGACAGCCTATGTGGTCTCCAGACCCTGCCAGAGGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS TCA 90 bp	AGACTGGAAACCCCTGGAACCAAATCCCAGGGATCCCGAGAAAGTTaGCTGGCAGGGCCTGCAGGGCCCTCGAATCCTCTGACTGTAGAA	+
Preference number: 5 (lower is better) Translates to: RLETPGTKSQGSRES*LAGPAGPSNPLTVE Trigger: TTCTACAGTCAGAGGATTCGAGGGCCCTGCAGGCCCTGCCAGTCAACTTTCTCGGGATCCCTGGGATTTGGTTCCAGGGGTTTCCAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR CAA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGGGGATCCCGAGAAAGTaGACTGGCAGGGCCTGCAGG	+
Preference number: 5 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLGIPRK*TGRACR Trigger: CCTGCAGGCCCTGCCAGTCAACTTTCTCGGGATCCC...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR CAA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGGATCGGATACTGCAGTaGGCCCCCAAAGGACTGGGA	+
Preference number: 5 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLDRILQ*APKGLG Trigger: TCCCAGTCCTTTGGGGGCCAACTGCAGTATCCGATC...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR CAA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGACAGACTGGCAGCTTTaGGTAGAGAAGCAGGTTGGG	+
Preference number: 5 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLTDWQL*VEKQVG Trigger: CCCAACCTGCTTCTCTACCAAAAGCTGCCAGTCTGT...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS-3UTR CAA 90 bp	TCTTTATTTAAACTTACAACCTTCCTCTTTGCAAAAATCAAGACCGGAAGTCTGAGCCAGTCCCACAGGTaGGCTGATAAGAAACAGACT	+
Preference number: 5 (lower is better) Translates to: SLFKLTTFLFAKIKTGSLSQSHR*ADKKQT Trigger: AGTCTGTTTCTTATCAGCCAACCTGTGGGACTGGCT...CAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTAAATAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS GCA 72 bp	ATCCCAGGGATCCCGAGAAAGTTGACTGGCAGGGCCTaGAGGGCCCTCGAATCCTCTGACTGTAGAAAGGCC	+
Preference number: 6 (lower is better) Translates to: IPGIPRKLTGRA*RALESSDCRKA Trigger: GGCCTTTCTACAGTCAGAGGATTCGAGGGCCCTGCAGGCCCTGCCAGTCAACTTTCTCGGGATCCCTGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS CCA 72 bp	AGGGTCTGGAGACCACATAGGCTGTCTGGCAGTTGGTaGGCTCACAGAAGGTTTCCTGGCACCCACTGTGAA	+
Preference number: 6 (lower is better) Translates to: RVWRPHRLSGSW*AHRRFPGTHCE Trigger: TTCACAGTGGGTGCCAGGAAACCTTCTGTGAGCCCACCAACTGCCAGACAGCCTATGTGGTCTCCAGACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189774.2
CDS CCA 72 bp	GAATCCTCTGACTGTAGAAAGGCCTCTGGCAGGGTCTaGAGACCACATAGGCTGTCTGGCAGTTGGTGGGCT	+
Preference number: 6 (lower is better) Translates to: ESSDCRKASGRV*RPHRLSGSWWA Trigger: AGCCCACCAACTGCCAGACAGCCTATGTGGTCTCCAGACCCTGCCAGAGGCCTTTCTACAGTCAGAGGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189774.2