Pregenerated sensors for KRT90 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048699Ensembl transcript IDs: ENSMUST00000023714.5
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATAACCTTAAAACTCACAGGCCACTTGGTATCTGTTCCTCTTGCTaGGGACTGCGGGCATGGGCTAAGCATCAGGCCTTAGTGCTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: DNLKTHRPLGICSSC*GLRAWAKHQALVLG Trigger: CCCCAGCACTAAGGCCTGATGCTTAGCCCATGCCCGCAGTCCCCAGCAAGAGGAACAGATACCAAGTGGCCTGTGAGTTTTAAGGTTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR GCA 90 bp | GATGATAACCTTAAAACTCACAGGCCACTTGGTATCTGTTCCTCTTaGTGGGGACTGCGGGCATGGGCTAAGCATCAGGCCTTAGTGCTG | + |
|
Preference number: 1 (lower is better) Translates to: DDNLKTHRPLGICSS*WGLRAWAKHQALVL Trigger: CAGCACTAAGGCCTGATGCTTAGCCCATGCCCGCAGTCCCCAGCAAGAGGAACAGATACCAAGTGGCCTGTGAGTTTTAAGGTTATCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR GCA 90 bp | ACAAACCTCCGTGCAATTCCTTCCTATAACCTCACACTCCCTCTGTaGAAACAGGAGTGTCCCTGTGTCCCTGGAGCAAGAGTAAGCAGC | + |
|
Preference number: 1 (lower is better) Translates to: TNLRAIPSYNLTLPL*KQECPCVPGARVSS Trigger: GCTGCTTACTCTTGCTCCAGGGACACAGGGACACTCCTGTTTGCACAGAGGGAGTGTGAGGTTATAGGAAGGAATTGCACGGAGGTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR GCA 90 bp | CATGAAGGACTGAGAGCCTCTTGTGGTTGCAGGGTCCAAACAGATTaGGAAGGACTTTCTGCACTTCCCTACTGCTTAAGGGGAAAGGTG | + |
|
Preference number: 1 (lower is better) Translates to: HEGLRASCGCRVQTD*EGLSALPYCLRGKV Trigger: CACCTTTCCCCTTAAGCAGTAGGGAAGTGCAGAAAGTCCTTCGCAATCTGTTTGGACCCTGCAACCACAAGAGGCTCTCAGTCCTTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR CCA 90 bp | GTCCCTGGAGCAAGAGTAAGCAGCAAAGATCTGCCTTTCTCTGACTaGCTCTGCCTTGAGGGATTAGAGAGTCTTCTTTTAGCCAGGACA | + |
|
Preference number: 1 (lower is better) Translates to: VPGARVSSKDLPFSD*LCLEGLESLLLART Trigger: TGTCCTGGCTAAAAGAAGACTCTCTAATCCCTCAAGGCAGAGCCAGTCAGAGAAAGGCAGATCTTTGCTGCTTACTCTTGCTCCAGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR TCA 90 bp | AAGAAAGGTGACTTTGGGCCACCAAGGTCAAGTTTAAAGTTCCCATaGAGGACTGAGAGCCTCTTGTGGTTGCAGGGTCCAAACAGATTG | + |
|
Preference number: 1 (lower is better) Translates to: KKGDFGPPRSSLKFP*RTESLLWLQGPNRL Trigger: CAATCTGTTTGGACCCTGCAACCACAAGAGGCTCTCAGTCCTTCATGGGAACTTTAAACTTGACCTTGGTGGCCCAAAGTCACCTTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR CCA 90 bp | CTTGAGGGATTAGAGAGTCTTCTTTTAGCCAGGACAAGGGATGCATaGTCCTCACAGCTCAGAGTCACTCAGGAGTCGAGAATCAAAGAA | + |
|
Preference number: 1 (lower is better) Translates to: LEGLESLLLARTRDA*SSQLRVTQESRIKE Trigger: TTCTTTGATTCTCGACTCCTGAGTGACTCTGAGCTGTGAGGACCATGCATCCCTTGTCCTGGCTAAAAGAAGACTCTCTAATCCCTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR-3UTR TCA 90 bp | ATAGGCATGCATGAGAGGAGCGGACAGCTTGGGAGGTTTGGCTGCTACTCCGAAGGTAGGGGAGGACTTTaGGATCAAGAATGGGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: IGMHERSGQLGRFGCYSEGRGGL*DQEWVG Trigger: CCCCACCCATTCTTGATCTCAAAGTCCTCCCCTACC...TTCGGAGTAGCAGCCAAACCTCCCAAGCTGTCCGCTCCTCTCATGCATGCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGCCTCTTGTGGTTGCAGGGTCCAAACAGATTGCGAAGGACTTTCTGCACTCCTCTTGCTGGGGACTaGGGGCATGGGCTAAGCATC | + |
|
Preference number: 2 (lower is better) Translates to: ESLLWLQGPNRLRRTFCTPLAGD*GHGLSI Trigger: GATGCTTAGCCCATGCCCGCAGTCCCCAGCAAGAGG...AGTGCAGAAAGTCCTTCGCAATCTGTTTGGACCCTGCAACCACAAGAGGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR CAA 90 bp | CTGCCTGGAGGCAGAAGGATGATAACCTTAAAACTCACAGGCCACTaGGTATCTGTTCCTCTTGCTGGGGACTGCGGGCATGGGCTAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LPGGRRMITLKLTGH*VSVPLAGDCGHGLS Trigger: GCTTAGCCCATGCCCGCAGTCCCCAGCAAGAGGAACAGATACCAAGTGGCCTGTGAGTTTTAAGGTTATCATCCTTCTGCCTCCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR-3UTR CCA 90 bp | AGACCTGCCTGGAGGCAGAAGGATGATAACCTTAAAACTCACAGGCCACTTGGTATCTGTTCCTCTTGCTaGGGACTGCGGGCATGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RPAWRQKDDNLKTHRPLGICSSC*GLRAWA Trigger: AGCCCATGCCCGCAGTCCCCAGCAAGAGGAACAGAT...ACCAAGTGGCCTGTGAGTTTTAAGGTTATCATCCTTCTGCCTCCAGGCAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR-3UTR CCA 90 bp | ATAGGCATGCATGAGAGGAGCGGACAGCTTGGGAGGTTTGGCTGCTACTCCGAAAACTCACAGGCCACTTaGTATCTGTTCCTCTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: IGMHERSGQLGRFGCYSENSQAT*YLFLLL Trigger: CAGCAAGAGGAACAGATACCAAGTGGCCTGTGAGTT...TTCGGAGTAGCAGCCAAACCTCCCAAGCTGTCCGCTCCTCTCATGCATGCCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR-3UTR TCA 90 bp | CAGGAGTGTCCCTGTGTCCCTGGAGCAAGAGTAAGCAGCAAAGATCTGCCTTTCAGAATCAAAGAAAGGTaGCTTTGGGCCACCAAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: QECPCVPGARVSSKDLPFRIKER*LWATKV Trigger: GACCTTGGTGGCCCAAAGTCACCTTTCTTTGATTCT...GAAAGGCAGATCTTTGCTGCTTACTCTTGCTCCAGGGACACAGGGACACTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCTCAGAGTCACTCAGGAGTCGAGAATCAAAGAAAGGTGACTTTGGGCCACCTGTGGAGACCTGCCTaGAGGCAGAAGGATGATAAC | + |
|
Preference number: 2 (lower is better) Translates to: TAQSHSGVENQRKVTLGHLWRPA*RQKDDN Trigger: GTTATCATCCTTCTGCCTCCAGGCAGGTCTCCACAG...GTGGCCCAAAGTCACCTTTCTTTGATTCTCGACTCCTGAGTGACTCTGAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR-3UTR GCA 90 bp | GTGCAAACAGGAGTGTCCCTGTGTCCCTGGAGCAAGAGTAAGCAGCAAAGATCTAGGGTCCAAACAGATTaGGAAGGACTTTCTGCACTT | + |
|
Preference number: 2 (lower is better) Translates to: VQTGVSLCPWSKSKQQRSRVQTD*EGLSAL Trigger: AAGTGCAGAAAGTCCTTCGCAATCTGTTTGGACCCT...AGATCTTTGCTGCTTACTCTTGCTCCAGGGACACAGGGACACTCCTGTTTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR-3UTR GCA 90 bp | CTCCGTGCAATTCCTTCCTATAACCTCACACTCCCTCTGTGCAAACAGGAGTGTTTGCGAAGGACTTTCTaGACTTCCCTACTGCTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LRAIPSYNLTLPLCKQECLRRTF*TSLLLK Trigger: CTTAAGCAGTAGGGAAGTGCAGAAAGTCCTTCGCAA...ACACTCCTGTTTGCACAGAGGGAGTGTGAGGTTATAGGAAGGAATTGCACGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR-3UTR TCA 90 bp | CAGGTATTTGAGGACTCACAACCCTTCAGACTAAACCACTGTGAAGACCAGGTTAGTTTAAAGTTCCCATaGAGGACTGAGAGCCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: QVFEDSQPFRLNHCEDQVSLKFP*RTESLL Trigger: CAAGAGGCTCTCAGTCCTTCATGGGAACTTTAAACT...AACCTGGTCTTCACAGTGGTTTAGTCTGAAGGGTTGTGAGTCCTCAAATACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR GCA 72 bp | CTTAAAACTCACAGGCCACTTGGTATCTGTTCCTCTTaGTGGGGACTGCGGGCATGGGCTAAGCATCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LKTHRPLGICSS*WGLRAWAKHQA Trigger: GGCCTGATGCTTAGCCCATGCCCGCAGTCCCCAGCAAGAGGAACAGATACCAAGTGGCCTGTGAGTTTTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR CCA 72 bp | GTGTGGGTAGGGGAGGACTTTGAGATCAAGAATGGGTaGGGTATCTCTGTGGAGACCTGCCTGGAGGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VWVGEDFEIKNG*GISVETCLEAE Trigger: TTCTGCCTCCAGGCAGGTCTCCACAGAGATACCCCACCCATTCTTGATCTCAAAGTCCTCCCCTACCCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR CCA 72 bp | AAAACTCACAGGCCACTTGGTATCTGTTCCTCTTGCTaGGGACTGCGGGCATGGGCTAAGCATCAGGCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: KTHRPLGICSSC*GLRAWAKHQAL Trigger: TAAGGCCTGATGCTTAGCCCATGCCCGCAGTCCCCAGCAAGAGGAACAGATACCAAGTGGCCTGTGAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR GCA 72 bp | ATGCATGAGAGGAGCGGACAGCTTGGGAGGTTTGGCTaGTACTCCGAAGCTGTTAACTTTCTGTTCACACGG | + |
|
Preference number: 3 (lower is better) Translates to: MHERSGQLGRFG*YSEAVNFLFTR Trigger: CCGTGTGAACAGAAAGTTAACAGCTTCGGAGTAGCAGCCAAACCTCCCAAGCTGTCCGCTCCTCTCATGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR TCA 72 bp | GACTTTGGGCCACCAAGGTCAAGTTTAAAGTTCCCATaGAGGACTGAGAGCCTCTTGTGGTTGCAGGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: DFGPPRSSLKFP*RTESLLWLQGP Trigger: TGGACCCTGCAACCACAAGAGGCTCTCAGTCCTTCATGGGAACTTTAAACTTGACCTTGGTGGCCCAAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR GCA 72 bp | TGGTTGCAGGGTCCAAACAGATTGCGAAGGACTTTCTaGACTTCCCTACTGCTTAAGGGGAAAGGTGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: WLQGPNRLRRTF*TSLLLKGKGVA Trigger: GGCTACACCTTTCCCCTTAAGCAGTAGGGAAGTGCAGAAAGTCCTTCGCAATCTGTTTGGACCCTGCAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR GCA 72 bp | CTGAGAGCCTCTTGTGGTTGCAGGGTCCAAACAGATTaGGAAGGACTTTCTGCACTTCCCTACTGCTTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LRASCGCRVQTD*EGLSALPYCLR Trigger: CCTTAAGCAGTAGGGAAGTGCAGAAAGTCCTTCGCAATCTGTTTGGACCCTGCAACCACAAGAGGCTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR CCA 72 bp | TCAAGAATGGGTGGGGTATCTCTGTGGAGACCTGCCTaGAGGCAGAAGGATGATAACCTTAAAACTCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SRMGGVSLWRPA*RQKDDNLKTHR Trigger: CCTGTGAGTTTTAAGGTTATCATCCTTCTGCCTCCAGGCAGGTCTCCACAGAGATACCCCACCCATTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR CCA 72 bp | AGGACTTTGAGATCAAGAATGGGTGGGGTATCTCTGTaGAGACCTGCCTGGAGGCAGAAGGATGATAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: RTLRSRMGGVSL*RPAWRQKDDNL Trigger: AAGGTTATCATCCTTCTGCCTCCAGGCAGGTCTCCACAGAGATACCCCACCCATTCTTGATCTCAAAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR CCA 72 bp | TTAGAGAGTCTTCTTTTAGCCAGGACAAGGGATGCATaGTCCTCACAGCTCAGAGTCACTCAGGAGTCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LESLLLARTRDA*SSQLRVTQESR Trigger: TCTCGACTCCTGAGTGACTCTGAGCTGTGAGGACCATGCATCCCTTGTCCTGGCTAAAAGAAGACTCTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR TCA 72 bp | CGACGGACCAACTGCCTTTGGGAAGTACTTTGTTCTTaGACTCGTAGCAGGTATTTGAGGACTCACAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: RRTNCLWEVLCS*TRSRYLRTHNP Trigger: AGGGTTGTGAGTCCTCAAATACCTGCTACGAGTTCAAGAACAAAGTACTTCCCAAAGGCAGTTGGTCCGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR GCA 72 bp | GTAAGCAGCAAAGATCTGCCTTTCTCTGACTGGCTCTaGCTTGAGGGATTAGAGAGTCTTCTTTTAGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSSKDLPFSDWL*LEGLESLLLAR Trigger: CCTGGCTAAAAGAAGACTCTCTAATCCCTCAAGGCAGAGCCAGTCAGAGAAAGGCAGATCTTTGCTGCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR TCA 72 bp | CATTTTATTGCAGCAGTTTTAGGAAATAGGCATGCATaGGAGGAGCGGACAGCTTGGGAGGTTTGGCTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: HFIAAVLGNRHA*EERTAWEVWLL Trigger: TAGCAGCCAAACCTCCCAAGCTGTCCGCTCCTCTCATGCATGCCTATTTCCTAAAACTGCTGCAATAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| 3UTR CCA 72 bp | GCAAGAGTAAGCAGCAAAGATCTGCCTTTCTCTGACTaGCTCTGCCTTGAGGGATTAGAGAGTCTTCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: ARVSSKDLPFSD*LCLEGLESLLL Trigger: TAAAAGAAGACTCTCTAATCCCTCAAGGCAGAGCCAGTCAGAGAAAGGCAGATCTTTGCTGCTTACTCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR TCA 90 bp | GTGCAAACAGGAGTGTCCCTGTGTCCCTGGAGCAAGAGTAAGCAGCAAAGATCTCAACACCTTCTCCAGTaGGCCTGCACTCCTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VQTGVSLCPWSKSKQQRSQHLLQ*ACTPRP Trigger: AGGGCGAGGAGTGCAGGCTCACTGGAGAAGGTGTTG...AGATCTTTGCTGCTTACTCTTGCTCCAGGGACACAGGGACACTCCTGTTTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CCA 90 bp | CTTCTTTTAGCCAGGACAAGGGATGCATGGTCCTCACAGCTCAGAGTCACTCAGGCTCGGCATCGGCAATaGAAGCCTGGAGTGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLARTRDAWSSQLRVTQARHRQ*KPGVWH Trigger: GTGCCACACTCCAGGCTTCCATTGCCGATGCCGAGC...CTGAGTGACTCTGAGCTGTGAGGACCATGCATCCCTTGTCCTGGCTAAAAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR GCA 90 bp | AGACCTGCCTGGAGGCAGAAGGATGATAACCTTAAAACTCACAGGCCACTTGGTTCCTCCACCACGTCCTaGATGCTCTTCAGCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPAWRQKDDNLKTHRPLGSSTTS*MLFSSV Trigger: GACGGAGCTGAAGAGCATGCAGGACGTGGTGGAGGA...ACCAAGTGGCCTGTGAGTTTTAAGGTTATCATCCTTCTGCCTCCAGGCAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR GCA 90 bp | AGACCTGCCTGGAGGCAGAAGGATGATAACCTTAAAACTCACAGGCCACTTGGTTCAGAACGCAGCCTCTaGATGGCCCGGTTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPAWRQKDDNLKTHRPLGSERSL*MARFSS Trigger: TGAGCTGAACCGGGCCATGCAGAGGCTGCGTTCTGA...ACCAAGTGGCCTGTGAGTTTTAAGGTTATCATCCTTCTGCCTCCAGGCAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CCA 90 bp | CTTCTTTTAGCCAGGACAAGGGATGCATGGTCCTCACAGCTCAGAGTCACTCAGGCAGCTTTCGGTAGGTaGCGATCTCTATGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLARTRDAWSSQLRVTQAAFGR*RSLCPG Trigger: CCCTGGACATAGAGATCGCCACCTACCGAAAGCTGC...CTGAGTGACTCTGAGCTGTGAGGACCATGCATCCCTTGTCCTGGCTAAAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR GCA 90 bp | ACAGCTCAGAGTCACTCAGGAGTCGAGAATCAAAGAAAGGTGACTTTGGGCCACTGGCCAGCAGACCTCTaGAGCTCCTCATACTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TAQSHSGVENQRKVTLGHWPADL*SSSYLV Trigger: GACCAAGTATGAGGAGCTGCAGAGGTCTGCTGGCCA...GTGGCCCAAAGTCACCTTTCTTTGATTCTCGACTCCTGAGTGACTCTGAGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CCA 90 bp | GTGCAAACAGGAGTGTCCCTGTGTCCCTGGAGCAAGAGTAAGCAGCAAAGATCTAAACTCTTCCCGCTCTaGGACACAGAGACAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VQTGVSLCPWSKSKQQRSKLFPL*DTETEL Trigger: CAGCTCTGTCTCTGTGTCCCAGAGCGGGAAGAGTTT...AGATCTTTGCTGCTTACTCTTGCTCCAGGGACACAGGGACACTCCTGTTTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR TCA 90 bp | CAGGTATTTGAGGACTCACAACCCTTCAGACTAAACCACTGTGAAGACCAGGTTTGTATCCTATGCCGCTaGCACCCAGACCACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVFEDSQPFRLNHCEDQVCILCR*HPDHRQ Trigger: CTGCCTGTGGTCTGGGTGTCAGCGGCATAGGATACA...AACCTGGTCTTCACAGTGGTTTAGTCTGAAGGGTTGTGAGTCCTCAAATACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR GCA 90 bp | AGGCAGAAGGATGATAACCTTAAAACTCACAGGCCACTTGGTATCTGTTCCTCTCTCCACTGTAGCCTGTaGCCCCGGAGGAAGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RQKDDNLKTHRPLGICSSLHCSL*PRRKRP Trigger: TGGTCTCTTCCTCCGGGGGCACAGGCTACAGTGGAG...AGAGGAACAGATACCAAGTGGCCTGTGAGTTTTAAGGTTATCATCCTTCTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CCA 90 bp | GAGATCAAGAATGGGTGGGGTATCTCTGTGGAGACCTGCCTGGAGGCAGAAGGAACATGGGCTCTAGATTaGTCCTGGTTGTTTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EIKNGWGISVETCLEAEGTWALD*SWLFCA Trigger: AGCACAAAACAACCAGGACCAATCTAGAGCCCATGT...TCCTTCTGCCTCCAGGCAGGTCTCCACAGAGATACCCCACCCATTCTTGATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CCA 90 bp | GTTGAGTCTGTGTGGGTAGGGGAGGACTTTGAGATCAAGAATGGGTGGGGTATCGCCGCTGTACGTCTGTaGATTTCCTCTTCGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VESVWVGEDFEIKNGWGIAAVRL*ISSSYL Trigger: CAAGTACGAAGAGGAAATCCACAGACGTACAGCGGC...GATACCCCACCCATTCTTGATCTCAAAGTCCTCCCCTACCCACACAGACTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGTAAGCAGCAAAGATCTGCCTTTCTCTGACTGGCTCTGCCTTGAGGGAGCAGCTCCTCATACTTaGTCTGGTACCAGGATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARVSSKDLPFSDWLCLEGAAPHT*SGTRIQ Trigger: CTGAATCCTGGTACCAGACCAAGTATGAGGAGCTGC...TCCCTCAAGGCAGAGCCAGTCAGAGAAAGGCAGATCTTTGCTGCTTACTCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CCA 90 bp | CTGTGGAGACCTGCCTGGAGGCAGAAGGATGATAACCTTAAAACTCACAGGCCAGTTGTTTTGTGCTCTTaGAGGAGGCTCCATTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LWRPAWRQKDDNLKTHRPVVLCS*RRLHLV Trigger: GACCAAATGGAGCCTCCTCCAAGAGCACAAAACAAC...TGGCCTGTGAGTTTTAAGGTTATCATCCTTCTGCCTCCAGGCAGGTCTCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR GCA 90 bp | AGACCTGCCTGGAGGCAGAAGGATGATAACCTTAAAACTCACAGGCCACTTGGTTGGAGACAATTCTCATaGTTGAACTGCTGCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPAWRQKDDNLKTHRPLGWRQFS*LNCCRS Trigger: TGAGCGGCAGCAGTTCAAGCATGAGAATTGTCTCCA...ACCAAGTGGCCTGTGAGTTTTAAGGTTATCATCCTTCTGCCTCCAGGCAGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CCA 90 bp | CTTCTTTTAGCCAGGACAAGGGATGCATGGTCCTCACAGCTCAGAGTCACTCAGGCTCTAGATTGGTCCTaGTTGTTTTGTGCTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLARTRDAWSSQLRVTQALDWS*LFCALG Trigger: TCCAAGAGCACAAAACAACCAGGACCAATCTAGAGC...CTGAGTGACTCTGAGCTGTGAGGACCATGCATCCCTTGTCCTGGCTAAAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR TCA 90 bp | CTGTGGAGACCTGCCTGGAGGCAGAAGGATGATAACCTTAAAACTCACAGGCCAACTCTTCTTGGTGGATaGTGTCTTGGAGACAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWRPAWRQKDDNLKTHRPTLLGG*CLGDNS Trigger: AGAATTGTCTCCAAGACATCATCCACCAAGAAGAGT...TGGCCTGTGAGTTTTAAGGTTATCATCCTTCTGCCTCCAGGCAGGTCTCCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CCA 90 bp | CTGTGGAGACCTGCCTGGAGGCAGAAGGATGATAACCTTAAAACTCACAGGCCAGGTAACTCTTCTTGGTaGATGATGTCTTGGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: LWRPAWRQKDDNLKTHRPGNSSW*MMSWRQ Trigger: TTGTCTCCAAGACATCATCCACCAAGAAGAGTTACC...TGGCCTGTGAGTTTTAAGGTTATCATCCTTCTGCCTCCAGGCAGGTCTCCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CCA 90 bp | AGGCAGAAGGATGATAACCTTAAAACTCACAGGCCACTTGGTATCTGTTCCTCTTGGAAGCCTGGAGTGTaGCACACTGCTTCTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RQKDDNLKTHRPLGICSSWKPGV*HTASSD Trigger: ATCTGAAGAAGCAGTGTGCCACACTCCAGGCTTCCA...AGAGGAACAGATACCAAGTGGCCTGTGAGTTTTAAGGTTATCATCCTTCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CCA 90 bp | AGACCTGCCTGGAGGCAGAAGGATGATAACCTTAAAACTCACAGGCCACTTGGTTGGTGGATGATGTCTTaGAGACAATTCTCATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RPAWRQKDDNLKTHRPLGWWMMS*RQFSCL Trigger: CAAGCATGAGAATTGTCTCCAAGACATCATCCACCA...ACCAAGTGGCCTGTGAGTTTTAAGGTTATCATCCTTCTGCCTCCAGGCAGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR GCA 90 bp | AGGCAGAAGGATGATAACCTTAAAACTCACAGGCCACTTGGTATCTGTTCCTCTCACAAACTCATTCTCTaGCGCTGTACGTCTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RQKDDNLKTHRPLGICSSHKLIL*RCTSVD Trigger: ATCCACAGACGTACAGCGGCAGAGAATGAGTTTGTG...AGAGGAACAGATACCAAGTGGCCTGTGAGTTTTAAGGTTATCATCCTTCTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS TCA 90 bp | ATCCATACCCTCCATAGGCTCCCCCAACTCTGTATCCTATGCCGCTaGCACCCAGACCACAGGCAGCGCCCCCAAAGCTGGCTCGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: IHTLHRLPQLCILCR*HPDHRQRPQSWLGW Trigger: CCACCCGAGCCAGCTTTGGGGGCGCTGCCTGTGGTCTGGGTGTCAGCGGCATAGGATACAGAGTTGGGGGAGCCTATGGAGGGTATGGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS CCA 90 bp | GTCCCAAAACCACCCCCTATGCCACCTCCGAAACTCTTCCCGCTCTaGGACACAGAGACAGAGCTGAAACCCGGCCGACATCCAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPKPPPMPPPKLFPL*DTETELKPGRHPGR Trigger: CCTTCCTGGATGTCGGCCGGGTTTCAGCTCTGTCTCTGTGTCCCAGAGCGGGAAGAGTTTCGGAGGTGGCATAGGGGGTGGTTTTGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CAA 90 bp | ATAGGCATGCATGAGAGGAGCGGACAGCTTGGGAGGTTTGGCTGCTACTCCGAAGGTTGTTTTGTGCTCTaGGAGGAGGCTCCATTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IGMHERSGQLGRFGCYSEGCFVL*EEAPFG Trigger: ACCAAATGGAGCCTCCTCCAAGAGCACAAAACAACC...TTCGGAGTAGCAGCCAAACCTCCCAAGCTGTCCGCTCCTCTCATGCATGCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CAA 90 bp | ATAGGCATGCATGAGAGGAGCGGACAGCTTGGGAGGTTTGGCTGCTACTCCGAAAACATGGGCTCTAGATaGGTCCTGGTTGTTTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: IGMHERSGQLGRFGCYSENMGSR*VLVVLC Trigger: GCACAAAACAACCAGGACCAATCTAGAGCCCATGTT...TTCGGAGTAGCAGCCAAACCTCCCAAGCTGTCCGCTCCTCTCATGCATGCCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CAA 90 bp | GTGCAAACAGGAGTGTCCCTGTGTCCCTGGAGCAAGAGTAAGCAGCAAAGATCTTGGAGGAGGCTCCATTaGGTCTCTAAGACTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VQTGVSLCPWSKSKQQRSWRRLH*VSKTLF Trigger: GAACAAAGTCTTAGAGACCAAATGGAGCCTCCTCCA...AGATCTTTGCTGCTTACTCTTGCTCCAGGGACACAGGGACACTCCTGTTTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CAA 90 bp | GCAAGAGTAAGCAGCAAAGATCTGCCTTTCTCTGACTGGCTCTGCCTTGAGGGACTAGATTGGTCCTGGTaGTTTTGTGCTCTTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ARVSSKDLPFSDWLCLEGLDWSW*FCALGG Trigger: TCCTCCAAGAGCACAAAACAACCAGGACCAATCTAG...TCCCTCAAGGCAGAGCCAGTCAGAGAAAGGCAGATCTTTGCTGCTTACTCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS-3UTR CAA 90 bp | TGGAGACCTGCCTGGAGGCAGAAGGATGATAACCTTAAAACTCACAGGCCACTTTTGGTGGATGATGTCTaGGAGACAATTCTCATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: WRPAWRQKDDNLKTHRPLLVDDV*ETILML Trigger: AAGCATGAGAATTGTCTCCAAGACATCATCCACCAA...AAGTGGCCTGTGAGTTTTAAGGTTATCATCCTTCTGCCTCCAGGCAGGTCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS CCA 72 bp | CCAGACCACAGGCAGCGCCCCCAAAGCTGGCTCGGGTaGAGCGGTAGCCCCCACCGATGGAGATCCTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PDHRQRPQSWLG*SGSPHRWRSSC Trigger: ACAAGAGGATCTCCATCGGTGGGGGCTACCGCTCCACCCGAGCCAGCTTTGGGGGCGCTGCCTGTGGTCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS TCA 72 bp | CTCCATAGGCTCCCCCAACTCTGTATCCTATGCCGCTaGCACCCAGACCACAGGCAGCGCCCCCAAAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LHRLPQLCILCR*HPDHRQRPQSW Trigger: CCAGCTTTGGGGGCGCTGCCTGTGGTCTGGGTGTCAGCGGCATAGGATACAGAGTTGGGGGAGCCTATGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS TCA 72 bp | CCCCTCCCAGGCACTCCAGCTGGCGCCTCAGGTTGGTaGTGTAGGCTTCGAACATGGGCTCTAGATTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLPGTPAGASGW*CRLRTWALDWS Trigger: GGACCAATCTAGAGCCCATGTTCGAAGCCTACATCACCAACCTGAGGCGCCAGCTGGAGTGCCTGGGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS CCA 72 bp | CGCGTTGCTCGGCATCGGCAATGGAAGCCTGGAGTGTaGCACACTGCTTCTTCAGATTGTCAATCTCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RVARHRQWKPGV*HTASSDCQSQN Trigger: GTTCTGAGATTGACAATCTGAAGAAGCAGTGTGCCACACTCCAGGCTTCCATTGCCGATGCCGAGCAACGCG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||
| CDS CAA 72 bp | CAGGACCACAGAGGTCTCAGAGATTTGAGCCTGAAGTaGAGCCAGCTCCGCTTCAAAGAAAGCTCTCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QDHRGLRDLSLK*SQLRFKESSQE Trigger: TTCCTGAGAGCTTTCTTTGAAGCGGAGCTGGCTCAACTTCAGGCTCAAATCTCTGAGACCTCTGTGGTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023714.5 |
||