Pregenerated sensors for KRT9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051617Ensembl transcript IDs: ENSMUST00000059707.3
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAACGGTTACCCCAGCTTGTGGCCGGCTTGTCTTGATGTCAGGATaGAGTAAGGATGCTTCATGTAGCTTCTGCCCTCCCGGGACAGTC | + |
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Preference number: 1 (lower is better) Translates to: QTVTPACGRLVLMSG*SKDASCSFCPPGTV Trigger: GACTGTCCCGGGAGGGCAGAAGCTACATGAAGCATCCTTACTGCATCCTGACATCAAGACAAGCCGGCCACAAGCTGGGGTAACCGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| 3UTR TCA 90 bp | CCATCCAGTTCCAAACGGTTACCCCAGCTTGTGGCCGGCTTGTCTTaGTGTCAGGATGCAGTAAGGATGCTTCATGTAGCTTCTGCCCTC | + |
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Preference number: 1 (lower is better) Translates to: PSSSKRLPQLVAGLS*CQDAVRMLHVASAL Trigger: GAGGGCAGAAGCTACATGAAGCATCCTTACTGCATCCTGACATCAAGACAAGCCGGCCACAAGCTGGGGTAACCGTTTGGAACTGGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAAGAATCACATTCTCCCTAGCCCTGAAGCCTCCCCAGCAAGGAACAGAGCCGTGGCCGGCTTGTCTTaGTGTCAGGATGCAGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: KKNHILPSPEASPARNRAVAGLS*CQDAVR Trigger: CCTTACTGCATCCTGACATCAAGACAAGCCGGCCAC...GGCTCTGTTCCTTGCTGGGGAGGCTTCAGGGCTAGGGAGAATGTGATTCTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| 3UTR-3UTR CCA 90 bp | ACACAAAGAAGAATCACATTCTCCCTAGCCCTGAAGCCTCCCCAGCAAGGAACACGGGACAGTCTCAGCTaGGGTCCGGTGGAGAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: TQRRITFSLALKPPQQGTRDSLS*GPVEKV Trigger: CACTTTCTCCACCGGACCCCAGCTGAGACTGTCCCG...TGTTCCTTGCTGGGGAGGCTTCAGGGCTAGGGAGAATGTGATTCTTCTTTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| 3UTR-3UTR GCA 90 bp | AGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGAAGAATCACATGTCCAGAGGCACAGTaGCAACTCCATCCAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SQDKEGSGATPRTQRRITCPEAQ*QLHPVP Trigger: TGGAACTGGATGGAGTTGGCACTGTGCCTCTGGACA...TGTGATTCTTCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| 3UTR CAA 90 bp | TCCATCCAGTTCCAAACGGTTACCCCAGCTTGTGGCCGGCTTGTCTaGATGTCAGGATGCAGTAAGGATGCTTCATGTAGCTTCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SIQFQTVTPACGRLV*MSGCSKDASCSFCP Trigger: AGGGCAGAAGCTACATGAAGCATCCTTACTGCATCCTGACATCAAGACAAGCCGGCCACAAGCTGGGGTAACCGTTTGGAACTGGATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| 3UTR GCA 72 bp | ATGTCAGGATGCAGTAAGGATGCTTCATGTAGCTTCTaGCCTCCCGGGACAGTCTCAGCTGGGGTCCGGTGG | + |
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Preference number: 3 (lower is better) Translates to: MSGCSKDASCSF*PPGTVSAGVRW Trigger: CCACCGGACCCCAGCTGAGACTGTCCCGGGAGGGCAGAAGCTACATGAAGCATCCTTACTGCATCCTGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| 3UTR-3UTR CAA 90 bp | AACAGAGCCAAGAGATGTCCAGAGGCACAGTGCCAACTCCATCCAGTTCCAAACTGTGGCCGGCTTGTCTaGATGTCAGGATGCAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: NRAKRCPEAQCQLHPVPNCGRLV*MSGCSK Trigger: CTTACTGCATCCTGACATCAAGACAAGCCGGCCACA...GTTTGGAACTGGATGGAGTTGGCACTGTGCCTCTGGACATCTCTTGGCTCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| 3UTR TCA 72 bp | TCCAAACGGTTACCCCAGCTTGTGGCCGGCTTGTCTTaGTGTCAGGATGCAGTAAGGATGCTTCATGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: SKRLPQLVAGLS*CQDAVRMLHVA Trigger: AGCTACATGAAGCATCCTTACTGCATCCTGACATCAAGACAAGCCGGCCACAAGCTGGGGTAACCGTTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR GCA 90 bp | ACTAGGAAGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGAAGTTCCTCCTCCATAGCTaGCTCCACTTCCTCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TRKSGQGREWSHPQDTKKFLLHS*LHFLPQ Trigger: CTGGGGGAGGAAGTGGAGGCAGCTATGGAGGAGGAA...CTTCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACTTCCTAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CCA 90 bp | ACTAGGAAGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGAAGTCACCTTCCACCCCTTaGCGCAGGCTTTGCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: TRKSGQGREWSHPQDTKKSPSTP*RRLCSI Trigger: GATGGAGCAAAGCCTGCGCCAAGGGGTGGAAGGTGA...CTTCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACTTCCTAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR GCA 90 bp | CTAGGAAGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGAAGACTCCACAGCTGCTGCTaGTGCTCCAGAAAGATGAGG | + |
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Preference number: 4 (lower is better) Translates to: LGSQDKEGSGATPRTQRRLHSCC*CSRKMR Trigger: CCTCATCTTTCTGGAGCAGCAGCAGCAGCTGTGGAG...TCTTCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACTTCCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CCA 90 bp | AAGAAGAATCACATTCTCCCTAGCCCTGAAGCCTCCCCAGCAAGGAACAGAGCCCGGATCTCAGCAAGCTaGGCCTCCAACTCGCTGATC | + |
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Preference number: 4 (lower is better) Translates to: KKNHILPSPEASPARNRARISAS*ASNSLI Trigger: GATCAGCGAGTTGGAGGCCCAGCTTGCTGAGATCCG...GGCTCTGTTCCTTGCTGGGGAGGCTTCAGGGCTAGGGAGAATGTGATTCTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CCA 90 bp | AGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGAAGAATCACACCACTTCCTCCTCCATaGCTGCCCCCACTTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SQDKEGSGATPRTQRRITPLPPP*LPPLSP Trigger: AGGAGAAAGTGGGGGCAGCCATGGAGGAGGAAGTGG...TGTGATTCTTCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CCA 90 bp | CTAGGAAGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGAAGACCACTTTTTCCACCATaGCTGCCCCCACTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LGSQDKEGSGATPRTQRRPLFPP*LPPLPP Trigger: TGGAGGAAGTGGGGGCAGCCATGGTGGAAAAAGTGG...TCTTCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACTTCCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CCA 90 bp | CTAGGAAGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGAAGACCACTTTTTCCACCATaGCTGCCCCCACTTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LGSQDKEGSGATPRTQRRPLFPP*LPPLPP Trigger: AGGAGGAAGTGGGGGCAGCCATGGTGGAAAAAGTGG...TCTTCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACTTCCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR TCA 90 bp | AGCAAGGAACAGAGCCAAGAGATGTCCAGAGGCACAGTGCCAACTCCATCCAGTGCAGTCTGCAGACTTTaGGGAGGACTGGGACTGAGA | + |
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Preference number: 4 (lower is better) Translates to: SKEQSQEMSRGTVPTPSSAVCRL*GGLGLR Trigger: TCTCAGTCCCAGTCCTCCTCAAAGTCTGCAGACTGC...ACTGGATGGAGTTGGCACTGTGCCTCTGGACATCTCTTGGCTCTGTTCCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR GCA 90 bp | AAGAAGAATCACATTCTCCCTAGCCCTGAAGCCTCCCCAGCAAGGAACAGAGCCCTCCTCCACAGCTGCTaGTGCTGCTCCAGAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: KKNHILPSPEASPARNRALLHSC*CCSRKM Trigger: CATCTTTCTGGAGCAGCAGCAGCAGCTGTGGAGGAG...GGCTCTGTTCCTTGCTGGGGAGGCTTCAGGGCTAGGGAGAATGTGATTCTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR GCA 90 bp | ACTAGGAAGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGAAGAGTTCCTGGATAGTGTaGTGGAGCTGGGACACTTGC | + |
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Preference number: 4 (lower is better) Translates to: TRKSGQGREWSHPQDTKKSSWIV*WSWDTC Trigger: GCAAGTGTCCCAGCTCCAGCACACTATCCAGGAACT...CTTCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACTTCCTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR TCA 90 bp | AGAATCACATTCTCCCTAGCCCTGAAGCCTCCCCAGCAAGGAACAGAGCCAAGATTTGGGCCCCCTCTTTaGATACCAGTCCTGGATCTG | + |
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Preference number: 4 (lower is better) Translates to: RITFSLALKPPQQGTEPRFGPPL*IPVLDL Trigger: CAGATCCAGGACTGGTATTCAAAGAGGGGGCCCAAA...TCTTGGCTCTGTTCCTTGCTGGGGAGGCTTCAGGGCTAGGGAGAATGTGATTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR TCA 90 bp | TTACTAGGAAGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGACCACTTCCTCCTCCATaGCTGCCTCCACTTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LLGSQDKEGSGATPRTQRPLPPP*LPPLFP Trigger: TGGAAAAAGTGGAGGCAGTCATGGAGGAGGAAGTGG...TCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACTTCCTAGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR GCA 90 bp | TTACTAGGAAGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGATTCCTCCTCCATAGCTaGCACCACTTCCTCCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LLGSQDKEGSGATPRTQRFLLHS*HHFLLH Trigger: ATGGAGGAGGAAGTGGTGGCAGCTATGGAGGAGGAA...TCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACTTCCTAGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CCA 90 bp | ACTAGGAAGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGAAGCCTTCTGGAAGACTTTaGGCCCCCTCTTTGAATACC | + |
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Preference number: 4 (lower is better) Translates to: TRKSGQGREWSHPQDTKKPSGRL*APSLNT Trigger: GGTATTCAAAGAGGGGGCCCAAAGTCTTCCAGAAGG...CTTCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACTTCCTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CCA 90 bp | AGGACACAAAGAAGAATCACATTCTCCCTAGCCCTGAAGCCTCCCCAGCAAGGATTCTGGCCCGTCAACTaGCTCATCTCCTCCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: RTQRRITFSLALKPPQQGFWPVN*LISSLW Trigger: CCACAAGGAGGAGATGAGCCAGTTGACGGGCCAGAA...TCCTTGCTGGGGAGGCTTCAGGGCTAGGGAGAATGTGATTCTTCTTTGTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CCA 90 bp | AAGAAGAATCACATTCTCCCTAGCCCTGAAGCCTCCCCAGCAAGGAACAGAGCCGGACTGGGACTGAGATaGCCTTCTATTTCCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: KKNHILPSPEASPARNRAGLGLR*PSISST Trigger: GGTGGAGGAAATAGAAGGCCATCTCAGTCCCAGTCC...GGCTCTGTTCCTTGCTGGGGAGGCTTCAGGGCTAGGGAGAATGTGATTCTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR TCA 90 bp | TGTGGCCGGCTTGTCTTGATGTCAGGATGCAGTAAGGATGCTTCATGTAGCTTCCCACTTTTTCCACCATaGCTGCCCCCACTTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: CGRLVLMSGCSKDASCSFPLFPP*LPPLPP Trigger: AGGAGGAAGTGGGGGCAGTCATGGTGGAAAAAGTGG...GAAGCTACATGAAGCATCCTTACTGCATCCTGACATCAAGACAAGCCGGCCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR GCA 90 bp | CGGCTTGTCTTGATGTCAGGATGCAGTAAGGATGCTTCATGTAGCTTCTGCCCTTCCAACTCGCTGATCTaGTCCTGGATCTGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RLVLMSGCSKDASCSFCPSNSLI*SWICCS Trigger: GCTGCAGCAGATCCAGGAGCAGATCAGCGAGTTGGA...AGGGCAGAAGCTACATGAAGCATCCTTACTGCATCCTGACATCAAGACAAGCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR GCA 90 bp | AACAGAGCCAAGAGATGTCCAGAGGCACAGTGCCAACTCCATCCAGTTCCAAACTTCCTCCCCCAGAACTaGTTCCTCCTCCATAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: NRAKRCPEAQCQLHPVPNFLPQN*FLLHSY Trigger: GTAGCTATGGAGGAGGAAGCAGTTCTGGGGGAGGAA...GTTTGGAACTGGATGGAGTTGGCACTGTGCCTCTGGACATCTCTTGGCTCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CCA 90 bp | AACAGAGCCAAGAGATGTCCAGAGGCACAGTGCCAACTCCATCCAGTTCCAAACTCCTGGATAGTGTGCTaGAGCTGGGACACTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: NRAKRCPEAQCQLHPVPNSWIVC*SWDTCF Trigger: GAAGCAAGTGTCCCAGCTCCAGCACACTATCCAGGA...GTTTGGAACTGGATGGAGTTGGCACTGTGCCTCTGGACATCTCTTGGCTCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR GCA 90 bp | TTACTAGGAAGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGATTCCTCCTCCATGACTaGCTCCACTTTTTCCACCAT | + |
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Preference number: 4 (lower is better) Translates to: LLGSQDKEGSGATPRTQRFLLHD*LHFFHH Trigger: ATGGTGGAAAAAGTGGAGGCAGTCATGGAGGAGGAA...TCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACTTCCTAGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR GCA 90 bp | ACAAAGAAGAATCACATTCTCCCTAGCCCTGAAGCCTCCCCAGCAAGGAACAGATTTTTCCACCATGGCTaGCCCCACTTCCTCCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: TKKNHILPSPEASPARNRFFHHG*PHFLLH Trigger: ATGGAGGAGGAAGTGGGGGCAGCCATGGTGGAAAAA...TCTGTTCCTTGCTGGGGAGGCTTCAGGGCTAGGGAGAATGTGATTCTTCTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CCA 90 bp | TTACTAGGAAGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGAATAGTGTGCTGGAGCTaGGACACTTGCTTCATGTTG | + |
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Preference number: 4 (lower is better) Translates to: LLGSQDKEGSGATPRTQRIVCWS*DTCFML Trigger: CAACATGAAGCAAGTGTCCCAGCTCCAGCACACTAT...TCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACTTCCTAGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| 3UTR CAA 72 bp | TTCCAAACGGTTACCCCAGCTTGTGGCCGGCTTGTCTaGATGTCAGGATGCAGTAAGGATGCTTCATGTAGC | + |
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Preference number: 4 (lower is better) Translates to: FQTVTPACGRLV*MSGCSKDASCS Trigger: GCTACATGAAGCATCCTTACTGCATCCTGACATCAAGACAAGCCGGCCACAAGCTGGGGTAACCGTTTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR GCA 90 bp | CGGCTTGTCTTGATGTCAGGATGCAGTAAGGATGCTTCATGTAGCTTCTGCCCTTTCCTCCTCCATAGCTaGCACCACTTCCTCTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: RLVLMSGCSKDASCSFCPFLLHS*HHFLFV Trigger: GACAAAGAGGAAGTGGTGGCAGCTATGGAGGAGGAA...AGGGCAGAAGCTACATGAAGCATCCTTACTGCATCCTGACATCAAGACAAGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR TCA 90 bp | CGGCTTGTCTTGATGTCAGGATGCAGTAAGGATGCTTCATGTAGCTTCTGCCCTCATCTTGTGCTCTTGTaGATCATCATCGCAGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: RLVLMSGCSKDASCSFCPHLVLL*IIIAVC Trigger: GCAGACTGCGATGATGATTCACAAGAGCACAAGATG...AGGGCAGAAGCTACATGAAGCATCCTTACTGCATCCTGACATCAAGACAAGCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR GCA 90 bp | AGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGAAGAATCACACCACTATTTGTCATTTaGTGCTCAATCTGGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: SQDKEGSGATPRTQRRITPLFVI*CSIWVI Trigger: GATGACCCAGATTGAGCAGCAAATGACAAATAGTGG...TGTGATTCTTCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR GCA 90 bp | TGTGGCCGGCTTGTCTTGATGTCAGGATGCAGTAAGGATGCTTCATGTAGCTTCACACTTGCTTCATGTTaGTCTCCATCTCTTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: CGRLVLMSGCSKDASCSFTLASC*SPSLGH Trigger: GTGGCCAAGAGATGGAGAGCAACATGAAGCAAGTGT...GAAGCTACATGAAGCATCCTTACTGCATCCTGACATCAAGACAAGCCGGCCACA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CCA 90 bp | AAGAAGAATCACATTCTCCCTAGCCCTGAAGCCTCCCCAGCAAGGAACAGAGCCTGTTGTTCAATGTCCTaGCGGTTCTTAGAAATGAGC | + |
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Preference number: 4 (lower is better) Translates to: KKNHILPSPEASPARNRACCSMS*RFLEMS Trigger: GCTCATTTCTAAGAACCGCCAGGACATTGAACAACA...GGCTCTGTTCCTTGCTGGGGAGGCTTCAGGGCTAGGGAGAATGTGATTCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CCA 90 bp | ACACAAAGAAGAATCACATTCTCCCTAGCCCTGAAGCCTCCCCAGCAAGGAACATTGCTCTCCATCTCTTaGCCACTATTTGTCATTTGC | + |
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Preference number: 4 (lower is better) Translates to: TQRRITFSLALKPPQQGTLLSIS*PLFVIC Trigger: GCAAATGACAAATAGTGGCCAAGAGATGGAGAGCAA...TGTTCCTTGCTGGGGAGGCTTCAGGGCTAGGGAGAATGTGATTCTTCTTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR GCA 90 bp | CCAAGTTTAATTTGCAACAGGAAAGCTTTACTAGGAAGTCAGGACAAGGAAGGGTGGAGCTGGGACACTTaGTTCATGTTGCTCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: PSLICNRKALLGSQDKEGWSWDT*FMLLSI Trigger: GATGGAGAGCAACATGAAGCAAGTGTCCCAGCTCCA...CCCTTCCTTGTCCTGACTTCCTAGTAAAGCTTTCCTGTTGCAAATTAAACTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR GCA 90 bp | CCAAGTTTAATTTGCAACAGGAAAGCTTTACTAGGAAGTCAGGACAAGGAAGGGTTTTTCCACCATGACTaGCCCCACTTCCTCCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: PSLICNRKALLGSQDKEGFFHHD*PHFLLH Trigger: ATGGAGGAGGAAGTGGGGGCAGTCATGGTGGAAAAA...CCCTTCCTTGTCCTGACTTCCTAGTAAAGCTTTCCTGTTGCAAATTAAACTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CAA 90 bp | AGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGAAGAATCACACCCTTGGCGCAGGCTTaGCTCCATCTCAAGCTTAAC | + |
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Preference number: 5 (lower is better) Translates to: SQDKEGSGATPRTQRRITPLAQA*LHLKLN Trigger: GTTAAGCTTGAGATGGAGCAAAGCCTGCGCCAAGGG...TGTGATTCTTCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CAA 90 bp | ACAAAGAAGAATCACATTCTCCCTAGCCCTGAAGCCTCCCCAGCAAGGAACAGAGTCACCTTCCACCCCTaGGCGCAGGCTTTGCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: TKKNHILPSPEASPARNRVTFHP*AQALLH Trigger: ATGGAGCAAAGCCTGCGCCAAGGGGTGGAAGGTGAC...TCTGTTCCTTGCTGGGGAGGCTTCAGGGCTAGGGAGAATGTGATTCTTCTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CAA 90 bp | AGAATCACATTCTCCCTAGCCCTGAAGCCTCCCCAGCAAGGAACAGAGCCAAGATCCTCACGCATGTCATaGAGGACCCGGGTGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: RITFSLALKPPQQGTEPRSSRMS*RTRVRS Trigger: AGATCTCACCCGGGTCCTCAATGACATGCGTGAGGA...TCTTGGCTCTGTTCCTTGCTGGGGAGGCTTCAGGGCTAGGGAGAATGTGATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CAA 90 bp | TTACTAGGAAGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGATGGCTCATCTCCTCCTaGTGGTTCTTCGTAAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: LLGSQDKEGSGATPRTQRWLISS*WFFVRA Trigger: TGCCCTTACGAAGAACCACAAGGAGGAGATGAGCCA...TCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACTTCCTAGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CAA 90 bp | ACTAGGAAGTCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGAAGCACAGTAGCGGTTCTTaGTGTCTTCCAAAGCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: TRKSGQGREWSHPQDTKKHSSGS*CLPKPS Trigger: AGAAGGCTTTGGAAGACACAAAGAACCGCTACTGTG...CTTCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGACTTCCTAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS TCA 90 bp | TTTGTGTCTTCCAAAGCCTTCTCCAGGGCTGATTTCGTGGTAAGCTaGGTCTGCAGCTCCACATTCAGTTCCTGGATAGTGTGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FVSSKAFSRADFVVS*VCSSTFSSWIVCWS Trigger: GCTCCAGCACACTATCCAGGAACTGAATGTGGAGCTGCAGACTCAGCTTACCACGAAATCAGCCCTGGAGAAGGCTTTGGAAGACACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CAA 90 bp | TCAGGACAAGGAAGGGAGTGGAGCCACCCCCAGGACACAAAGAAGAATCACATTTCCTTCTGGAAGACTTaGGGCCCCCTCTTTGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: SGQGREWSHPQDTKKNHISFWKT*GPLFEY Trigger: GTATTCAAAGAGGGGGCCCAAAGTCTTCCAGAAGGA...AATGTGATTCTTCTTTGTGTCCTGGGGGTGGCTCCACTCCCTTCCTTGTCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS GCA 90 bp | CCCTCTTTGAATACCAGTCCTGGATCTGCTTCTCCATGGCAGTGTTaGTCTCCTCCAGTTCTAGTACTTTCTCCATGTAAGAGGCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSLNTSPGSASPWQC*SPPVLVLSPCKRPD Trigger: GTCTGGCCTCTTACATGGAGAAAGTACTAGAACTGGAGGAGAGCAACACTGCCATGGAGAAGCAGATCCAGGACTGGTATTCAAAGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CCA 90 bp | TCATCCAACACCTTCTTCAGGCCATTAATGTCACCTTCCACCCCTTaGCGCAGGCTTTGCTCCATCTCAAGCTTAACTCTGAAGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SSNTFFRPLMSPSTP*RRLCSISSLTLKSS Trigger: GGATGACTTCAGAGTTAAGCTTGAGATGGAGCAAAGCCTGCGCCAAGGGGTGGAAGGTGACATTAATGGCCTGAAGAAGGTGTTGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CAA 90 bp | CGGCTTGTCTTGATGTCAGGATGCAGTAAGGATGCTTCATGTAGCTTCTGCCCTTCCACGAGAGTTTTGTaGTTCCTCACCGTGAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: RLVLMSGCSKDASCSFCPSTRVL*FLTVRS Trigger: GGATCTCACGGTGAGGAACAACAAAACTCTCGTGGA...AGGGCAGAAGCTACATGAAGCATCCTTACTGCATCCTGACATCAAGACAAGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CAA 90 bp | AGCAAGGAACAGAGCCAAGAGATGTCCAGAGGCACAGTGCCAACTCCATCCAGTATAGTCATGCGAGTATaGTCGATGTCCACGAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SKEQSQEMSRGTVPTPSSIVMRV*SMSTRV Trigger: AACTCTCGTGGACATCGACAATACTCGCATGACTAT...ACTGGATGGAGTTGGCACTGTGCCTCTGGACATCTCTTGGCTCTGTTCCTTGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS GCA 90 bp | AGCTCCACATTCAGTTCCTGGATAGTGTGCTGGAGCTGGGACACTTaGTTCATGTTGCTCTCCATCTCTTGGCCACTATTTGTCATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSTFSSWIVCWSWDT*FMLLSISWPLFVIC Trigger: GCAAATGACAAATAGTGGCCAAGAGATGGAGAGCAACATGAAGCAAGTGTCCCAGCTCCAGCACACTATCCAGGAACTGAATGTGGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS GCA 90 bp | CACTTCCTCCTCCATAGCTGCCACCACTTCCTCTTTGTCTTCCTTTaGCACTTCCAAAGCCAATTTGTCCAGCTCCAGACGATTCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HFLLHSCHHFLFVFL*HFQSQFVQLQTIQS Trigger: ACTTTGAATCGTCTGGAGCTGGACAAATTGGCTTTGGAAGTGGCAAAGGAAGACAAAGAGGAAGTGGTGGCAGCTATGGAGGAGGAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS-3UTR CAA 90 bp | AGCAAGGAACAGAGCCAAGAGATGTCCAGAGGCACAGTGCCAACTCCATCCAGTTCTCTTGGCCACTATTaGTCATTTGCTGCTCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: SKEQSQEMSRGTVPTPSSSLGHY*SFAAQS Trigger: AGATTGAGCAGCAAATGACAAATAGTGGCCAAGAGA...ACTGGATGGAGTTGGCACTGTGCCTCTGGACATCTCTTGGCTCTGTTCCTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CCA 90 bp | GTGCTAGGAGCAACATTTATCTCCACATTAACATCTCCATCATTCTaGCCCGTCAACTGGCTCATCTCCTCCTTGTGGTTCTTCGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLGATFISTLTSPSF*PVNWLISSLWFFVR Trigger: CCTTACGAAGAACCACAAGGAGGAGATGAGCCAGTTGACGGGCCAGAATGATGGAGATGTTAATGTGGAGATAAATGTTGCTCCTAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS TCA 90 bp | TGCGAGTATTGTCGATGTCCACGAGAGTTTTGTTGTTCCTCACCGTaGGATCCACAATTCTGTCCTTCAGGTCTTCGATGGTGTCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: CEYCRCPREFCCSSP*DPQFCPSGLRWCHS Trigger: ACTATGACACCATCGAAGACCTGAAGGACAGAATTGTGGATCTCACGGTGAGGAACAACAAAACTCTCGTGGACATCGACAATACTCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CCA 90 bp | ACATTTATCTCCACATTAACATCTCCATCATTCTGGCCCGTCAACTaGCTCATCTCCTCCTTGTGGTTCTTCGTAAGGGCATTCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TFISTLTSPSFWPVN*LISSLWFFVRAFFS Trigger: TGAGAAGAATGCCCTTACGAAGAACCACAAGGAGGAGATGAGCCAGTTGACGGGCCAGAATGATGGAGATGTTAATGTGGAGATAAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS GCA 72 bp | CTCCTCCATAGCTCCCTCCACTTCCTCCTCCATAGCTaGCCCCACTTCCTCCTCCATAGCTGCCCCCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLHSSLHFLLHS*PHFLLHSCPHF Trigger: GAAGTGGGGGCAGCTATGGAGGAGGAAGTGGGGGCAGCTATGGAGGAGGAAGTGGAGGGAGCTATGGAGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
||
| CDS GCA 72 bp | CAGAATGCTGTATTCCTGACTCTGGCATTCAGTTTCTaGCCGGATCTCAGCAAGCTGGGCCTCCAACTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: QNAVFLTLAFSF*PDLSKLGLQLA Trigger: AGCGAGTTGGAGGCCCAGCTTGCTGAGATCCGGGCAGAAACTGAATGCCAGAGTCAGGAATACAGCATTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CCA 72 bp | GTCTGCAGCTCCACATTCAGTTCCTGGATAGTGTGCTaGAGCTGGGACACTTGCTTCATGTTGCTCTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: VCSSTFSSWIVC*SWDTCFMLLSI Trigger: GATGGAGAGCAACATGAAGCAAGTGTCCCAGCTCCAGCACACTATCCAGGAACTGAATGTGGAGCTGCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 72 bp | AAAGCCAATTTGTCCAGCTCCAGACGATTCAAAGTCTaGCTGGCCGCCTTCAAGGAGCTCCCGGTAAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KANLSSSRRFKV*LAAFKELPVSL Trigger: GAGACTTACCGGGAGCTCCTTGAAGGCGGCCAGCAAGACTTTGAATCGTCTGGAGCTGGACAAATTGGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS TCA 72 bp | TCCAAAGCCTTCTCCAGGGCTGATTTCGTGGTAAGCTaGGTCTGCAGCTCCACATTCAGTTCCTGGATAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SKAFSRADFVVS*VCSSTFSSWIV Trigger: CACTATCCAGGAACTGAATGTGGAGCTGCAGACTCAGCTTACCACGAAATCAGCCCTGGAGAAGGCTTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CCA 72 bp | ACCTTCTTCAGGCCATTAATGTCACCTTCCACCCCTTaGCGCAGGCTTTGCTCCATCTCAAGCTTAACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TFFRPLMSPSTP*RRLCSISSLTL Trigger: CAGAGTTAAGCTTGAGATGGAGCAAAGCCTGCGCCAAGGGGTGGAAGGTGACATTAATGGCCTGAAGAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CCA 72 bp | AGCTCCACATTCAGTTCCTGGATAGTGTGCTGGAGCTaGGACACTTGCTTCATGTTGCTCTCCATCTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSTFSSWIVCWS*DTCFMLLSISW Trigger: CCAAGAGATGGAGAGCAACATGAAGCAAGTGTCCCAGCTCCAGCACACTATCCAGGAACTGAATGTGGAGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 72 bp | CACCTTCTTCAGGCCATTAATGTCACCTTCCACCCCTaGGCGCAGGCTTTGCTCCATCTCAAGCTTAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: HLLQAINVTFHP*AQALLHLKLNS Trigger: AGAGTTAAGCTTGAGATGGAGCAAAGCCTGCGCCAAGGGGTGGAAGGTGACATTAATGGCCTGAAGAAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 90 bp | GCCACTTCCAAAGCCAATTTGTCCAGCTCCAGACGATTCAAAGTCTaGCTGGCCGCCTTCAAGGAGCTCCCGGTAAGTCTCAATTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ATSKANLSSSRRFKV*LAAFKELPVSLNFF Trigger: AAAGAAATTGAGACTTACCGGGAGCTCCTTGAAGGCGGCCAGCAAGACTTTGAATCGTCTGGAGCTGGACAAATTGGCTTTGGAAGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CCA 72 bp | TCATTCTGGCCCGTCAACTGGCTCATCTCCTCCTTGTaGTTCTTCGTAAGGGCATTCTTCTCATCCTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SFWPVNWLISSL*FFVRAFFSSSK Trigger: TTTGGAGGATGAGAAGAATGCCCTTACGAAGAACCACAAGGAGGAGATGAGCCAGTTGACGGGCCAGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CCA 72 bp | TCCACATTAACATCTCCATCATTCTGGCCCGTCAACTaGCTCATCTCCTCCTTGTGGTTCTTCGTAAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: STLTSPSFWPVN*LISSLWFFVRA Trigger: TGCCCTTACGAAGAACCACAAGGAGGAGATGAGCCAGTTGACGGGCCAGAATGATGGAGATGTTAATGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 90 bp | ATCATCCAACACCTTCTTCAGGCCATTAATGTCACCTTCCACCCCTaGGCGCAGGCTTTGCTCCATCTCAAGCTTAACTCTGAAGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: IIQHLLQAINVTFHP*AQALLHLKLNSEVI Trigger: GATGACTTCAGAGTTAAGCTTGAGATGGAGCAAAGCCTGCGCCAAGGGGTGGAAGGTGACATTAATGGCCTGAAGAAGGTGTTGGATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 90 bp | TGGCGGTTCTTAGAAATGAGCTGTTCGTATTCCTCACGCATGTCATaGAGGACCCGGGTGAGATCTGTGCTAGGAGCAACATTTATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WRFLEMSCSYSSRMS*RTRVRSVLGATFIS Trigger: GGAGATAAATGTTGCTCCTAGCACAGATCTCACCCGGGTCCTCAATGACATGCGTGAGGAATACGAACAGCTCATTTCTAAGAACCGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 90 bp | AGTGTGCTGGAGCTGGGACACTTGCTTCATGTTGCTCTCCATCTCTaGGCCACTATTTGTCATTTGCTGCTCAATCTGGGTCATCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SVLELGHLLHVALHL*ATICHLLLNLGHLG Trigger: TCCAAGATGACCCAGATTGAGCAGCAAATGACAAATAGTGGCCAAGAGATGGAGAGCAACATGAAGCAAGTGTCCCAGCTCCAGCACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 90 bp | CAGCTCCACATTCAGTTCCTGGATAGTGTGCTGGAGCTGGGACACTaGCTTCATGTTGCTCTCCATCTCTTGGCCACTATTTGTCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: QLHIQFLDSVLELGH*LHVALHLLATICHL Trigger: CAAATGACAAATAGTGGCCAAGAGATGGAGAGCAACATGAAGCAAGTGTCCCAGCTCCAGCACACTATCCAGGAACTGAATGTGGAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS GCA 72 bp | TTCAGTTCCTGGATAGTGTGCTGGAGCTGGGACACTTaGTTCATGTTGCTCTCCATCTCTTGGCCACTATTT | + |
|
Preference number: 6 (lower is better) Translates to: FSSWIVCWSWDT*FMLLSISWPLF Trigger: AAATAGTGGCCAAGAGATGGAGAGCAACATGAAGCAAGTGTCCCAGCTCCAGCACACTATCCAGGAACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CCA 72 bp | CCCTCTTTGAATACCAGTCCTGGATCTGCTTCTCCATaGCAGTGTTGCTCTCCTCCAGTTCTAGTACTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSLNTSPGSASP*QCCSPPVLVLS Trigger: AGAAAGTACTAGAACTGGAGGAGAGCAACACTGCCATGGAGAAGCAGATCCAGGACTGGTATTCAAAGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 72 bp | TTAGAAATGAGCTGTTCGTATTCCTCACGCATGTCATaGAGGACCCGGGTGAGATCTGTGCTAGGAGCAACA | + |
|
Preference number: 6 (lower is better) Translates to: LEMSCSYSSRMS*RTRVRSVLGAT Trigger: TGTTGCTCCTAGCACAGATCTCACCCGGGTCCTCAATGACATGCGTGAGGAATACGAACAGCTCATTTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 72 bp | TGGATAGTGTGCTGGAGCTGGGACACTTGCTTCATGTaGCTCTCCATCTCTTGGCCACTATTTGTCATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: WIVCWSWDTCFM*LSISWPLFVIC Trigger: GCAAATGACAAATAGTGGCCAAGAGATGGAGAGCAACATGAAGCAAGTGTCCCAGCTCCAGCACACTATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 72 bp | ATTCAGTTCCTGGATAGTGTGCTGGAGCTGGGACACTaGCTTCATGTTGCTCTCCATCTCTTGGCCACTATT | + |
|
Preference number: 6 (lower is better) Translates to: IQFLDSVLELGH*LHVALHLLATI Trigger: AATAGTGGCCAAGAGATGGAGAGCAACATGAAGCAAGTGTCCCAGCTCCAGCACACTATCCAGGAACTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 72 bp | TCCTCTTTGTCTTCCTTTGCCACTTCCAAAGCCAATTaGTCCAGCTCCAGACGATTCAAAGTCTTGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSLSSFATSKAN*SSSRRFKVLLA Trigger: GGCCAGCAAGACTTTGAATCGTCTGGAGCTGGACAAATTGGCTTTGGAAGTGGCAAAGGAAGACAAAGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 90 bp | TTCAGTTCCTGGATAGTGTGCTGGAGCTGGGACACTTGCTTCATGTaGCTCTCCATCTCTTGGCCACTATTTGTCATTTGCTGCTCAATC | + |
|
Preference number: 6 (lower is better) Translates to: FSSWIVCWSWDTCFM*LSISWPLFVICCSI Trigger: GATTGAGCAGCAAATGACAAATAGTGGCCAAGAGATGGAGAGCAACATGAAGCAAGTGTCCCAGCTCCAGCACACTATCCAGGAACTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 90 bp | TCATCCATAGTCATGCGAGTATTGTCGATGTCCACGAGAGTTTTGTaGTTCCTCACCGTGAGATCCACAATTCTGTCCTTCAGGTCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SSIVMRVLSMSTRVL*FLTVRSTILSFRSS Trigger: CGAAGACCTGAAGGACAGAATTGTGGATCTCACGGTGAGGAACAACAAAACTCTCGTGGACATCGACAATACTCGCATGACTATGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 90 bp | GCTGGGACACTTGCTTCATGTTGCTCTCCATCTCTTGGCCACTATTaGTCATTTGCTGCTCAATCTGGGTCATCTTGGACTCATAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: AGTLASCCSPSLGHY*SFAAQSGSSWTHSV Trigger: AACACTATGAGTCCAAGATGACCCAGATTGAGCAGCAAATGACAAATAGTGGCCAAGAGATGGAGAGCAACATGAAGCAAGTGTCCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS GCA 72 bp | AATACCAGTCCTGGATCTGCTTCTCCATGGCAGTGTTaGTCTCCTCCAGTTCTAGTACTTTCTCCATGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: NTSPGSASPWQC*SPPVLVLSPCK Trigger: CTTACATGGAGAAAGTACTAGAACTGGAGGAGAGCAACACTGCCATGGAGAAGCAGATCCAGGACTGGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CCA 72 bp | TGTCATAGTAATGAGTGTTGTCCTTCTGGAAGACTTTaGGCCCCCTCTTTGAATACCAGTCCTGGATCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CHSNECCPSGRL*APSLNTSPGSA Trigger: AGCAGATCCAGGACTGGTATTCAAAGAGGGGGCCCAAAGTCTTCCAGAAGGACAACACTCATTACTATGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 72 bp | AGACGGGAATTGAGGTTCTGCATAACGATTTTCTCATaGGTGTTCAGAATACCGCCTTCACCACCTCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RRELRFCITIFS*VFRIPPSPPPE Trigger: CTCTGGAGGTGGTGAAGGCGGTATTCTGAACACCAATGAGAAAATCGTTATGCAGAACCTCAATTCCCGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 90 bp | AAGTCATCCATAGTCATGCGAGTATTGTCGATGTCCACGAGAGTTTaGTTGTTCCTCACCGTGAGATCCACAATTCTGTCCTTCAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: KSSIVMRVLSMSTRV*LFLTVRSTILSFRS Trigger: AGACCTGAAGGACAGAATTGTGGATCTCACGGTGAGGAACAACAAAACTCTCGTGGACATCGACAATACTCGCATGACTATGGATGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 90 bp | TCCATCTCAAGCTTAACTCTGAAGTCATCCATAGTCATGCGAGTATaGTCGATGTCCACGAGAGTTTTGTTGTTCCTCACCGTGAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: SISSLTLKSSIVMRV*SMSTRVLLFLTVRS Trigger: GGATCTCACGGTGAGGAACAACAAAACTCTCGTGGACATCGACAATACTCGCATGACTATGGATGACTTCAGAGTTAAGCTTGAGATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 72 bp | ATAGTCATGCGAGTATTGTCGATGTCCACGAGAGTTTaGTTGTTCCTCACCGTGAGATCCACAATTCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: IVMRVLSMSTRV*LFLTVRSTILS Trigger: GGACAGAATTGTGGATCTCACGGTGAGGAACAACAAAACTCTCGTGGACATCGACAATACTCGCATGACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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| CDS CAA 72 bp | CATGTTGCTCTCCATCTCTTGGCCACTATTTGTCATTaGCTGCTCAATCTGGGTCATCTTGGACTCATAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HVALHLLATICH*LLNLGHLGLIV Trigger: CACTATGAGTCCAAGATGACCCAGATTGAGCAGCAAATGACAAATAGTGGCCAAGAGATGGAGAGCAACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
||
| CDS CAA 72 bp | AGCTTAACTCTGAAGTCATCCATAGTCATGCGAGTATaGTCGATGTCCACGAGAGTTTTGTTGTTCCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: SLTLKSSIVMRV*SMSTRVLLFLT Trigger: GGTGAGGAACAACAAAACTCTCGTGGACATCGACAATACTCGCATGACTATGGATGACTTCAGAGTTAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059707.3 |
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