Pregenerated sensors for KRT87 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047641Ensembl transcript IDs: ENSMUST00000081945.5
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAGACAGAAAGTGGCCATAGTCCCCATCCCACCAGTTCCCCCTTaGACAGTTCCCTGTGCACAGACAGGGAGGCCTGGAACAGTATGG | + |
|
Preference number: 1 (lower is better) Translates to: PRQKVAIVPIPPVPP*TVPCAQTGRPGTVW Trigger: CCATACTGTTCCAGGCCTCCCTGTCTGTGCACAGGGAACTGTCCAAGGGGGAACTGGTGGGATGGGGACTATGGCCACTTTCTGTCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR CCA 90 bp | ACCAGTTCCCCCTTGGACAGTTCCCTGTGCACAGACAGGGAGGCCTaGAACAGTATGGGGGTCTTTGAAATGTGCAAAGGCTTCTTGAAC | + |
|
Preference number: 1 (lower is better) Translates to: TSSPLDSSLCTDREA*NSMGVFEMCKGFLN Trigger: GTTCAAGAAGCCTTTGCACATTTCAAAGACCCCCATACTGTTCCAGGCCTCCCTGTCTGTGCACAGGGAACTGTCCAAGGGGGAACTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR TCA 90 bp | TTCCCTGTGCACAGACAGGGAGGCCTGGAACAGTATGGGGGTCTTTaGAATGTGCAAAGGCTTCTTGAACAGCAAGACCTGTTCAAAGCC | + |
|
Preference number: 1 (lower is better) Translates to: FPVHRQGGLEQYGGL*NVQRLLEQQDLFKA Trigger: GGCTTTGAACAGGTCTTGCTGTTCAAGAAGCCTTTGCACATTTCAAAGACCCCCATACTGTTCCAGGCCTCCCTGTCTGTGCACAGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR GCA 90 bp | ACAGCTAAGGAGATTAGTAAACCCAACCAACTAAAGGCATATGCTTaGTGCCCCTGTACCTGGGGACAGAAGTGGGAGCTGCTTGGGAAG | + |
|
Preference number: 1 (lower is better) Translates to: TAKEISKPNQLKAYA*CPCTWGQKWELLGK Trigger: CTTCCCAAGCAGCTCCCACTTCTGTCCCCAGGTACAGGGGCAGCAAGCATATGCCTTTAGTTGGTTGGGTTTACTAATCTCCTTAGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR TCA 90 bp | AGACAGGTTGGGGTTAAGGGAAGGGTTGGGAATGACCTTCTAAAGTaGAGCCAGAGGAGAACTGGGAGACAACTCCCTAAAAGGAGAAGG | + |
|
Preference number: 1 (lower is better) Translates to: RQVGVKGRVGNDLLK*SQRRTGRQLPKRRR Trigger: CCTTCTCCTTTTAGGGAGTTGTCTCCCAGTTCTCCTCTGGCTTCACTTTAGAAGGTCATTCCCAACCCTTCCCTTAACCCCAACCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR TCA 90 bp | GCCTTGACCCAGGAAGGCCACACTTTATTGTCCAGTCAGCCTGGGTaGCTGGTAGTGTCCCAGAGAGCTTTGCGAATAATACAAATCATT | + |
|
Preference number: 1 (lower is better) Translates to: ALTQEGHTLLSSQPG*LVVSQRALRIIQII Trigger: AATGATTTGTATTATTCGCAAAGCTCTCTGGGACACTACCAGTCACCCAGGCTGACTGGACAATAAAGTGTGGCCTTCCTGGGTCAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR CCA 90 bp | CCTAAAAGGAGAAGGCAGAGGAGAGTGGCCCTAAACAGGAACATCTaGAAGATTCTGGAAGCAAGCACACATTTTCCATTCACACACCAC | + |
|
Preference number: 1 (lower is better) Translates to: PKRRRQRRVALNRNI*KILEASTHFPFTHH Trigger: GTGGTGTGTGAATGGAAAATGTGTGCTTGCTTCCAGAATCTTCCAGATGTTCCTGTTTAGGGCCACTCTCCTCTGCCTTCTCCTTTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR CAA 90 bp | ACCCAGACAGAAAGTGGCCATAGTCCCCATCCCACCAGTTCCCCCTaGGACAGTTCCCTGTGCACAGACAGGGAGGCCTGGAACAGTATG | + |
|
Preference number: 2 (lower is better) Translates to: TQTESGHSPHPTSSP*DSSLCTDREAWNSM Trigger: CATACTGTTCCAGGCCTCCCTGTCTGTGCACAGGGAACTGTCCAAGGGGGAACTGGTGGGATGGGGACTATGGCCACTTTCTGTCTGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR-3UTR CCA 90 bp | TGCGTTGAAGCAGCGTTTATTGAAACACAGATGGGGTCAACCCAGAAGGCGAGGTCTGGGGCAGGCAGGTaGCTCATTTGGAGGCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: CVEAAFIETQMGSTQKARSGAGR*LIWRPW Trigger: CCAGGGCCTCCAAATGAGCCACCTGCCTGCCCCAGA...CCTCGCCTTCTGGGTTGACCCCATCTGTGTTTCAATAAACGCTGCTTCAACGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGGTGGTTAGGATCATGCCTTGACCCAGGAAGGCCACACTTTATTGTCCAGCACACCACTCCACTCTaGGGCAGGCAGGTGGCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: AGWLGSCLDPGRPHFIVQHTTPL*GRQVAH Trigger: ATGAGCCACCTGCCTGCCCCAGAGTGGAGTGGTGTG...CTGGACAATAAAGTGTGGCCTTCCTGGGTCAAGGCATGATCCTAACCACCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR-3UTR TCA 90 bp | GCGTTGAAGCAGCGTTTATTGAAACACAGATGGGGTCAACCCAGAAGGCGAGGCAATGACCTTCTAAAGTaGAGCCAGAGGAGAACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: ALKQRLLKHRWGQPRRRGNDLLK*SQRRTG Trigger: CCCAGTTCTCCTCTGGCTTCACTTTAGAAGGTCATT...GCCTCGCCTTCTGGGTTGACCCCATCTGTGTTTCAATAAACGCTGCTTCAACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR-3UTR CCA 90 bp | CCAAAGGAAGGCACAGCTAAGGAGATTAGTAAACCCAACCAACTAAAGGCATATACCTGGGGACAGAAGTaGGAGCTGCTTGGGAAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: PKEGTAKEISKPNQLKAYTWGQK*ELLGKG Trigger: ACCCTTCCCAAGCAGCTCCCACTTCTGTCCCCAGGT...ATATGCCTTTAGTTGGTTGGGTTTACTAATCTCCTTAGCTGTGCCTTCCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR-3UTR CCA 90 bp | GCGTTGAAGCAGCGTTTATTGAAACACAGATGGGGTCAACCCAGAAGGCGAGGCACATCTGGAAGATTCTaGAAGCAAGCACACATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: ALKQRLLKHRWGQPRRRGTSGRF*KQAHIF Trigger: GAAAATGTGTGCTTGCTTCCAGAATCTTCCAGATGT...GCCTCGCCTTCTGGGTTGACCCCATCTGTGTTTCAATAAACGCTGCTTCAACGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTGACTGGTAGTGTCCCAGAGAGCTTTGCGAATAATACAAATCATTTACAACTAAACAGGAACATCTaGAAGATTCTGGAAGCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: WVTGSVPESFANNTNHLQLNRNI*KILEAS Trigger: GCTTGCTTCCAGAATCTTCCAGATGTTCCTGTTTAG...TTGTAAATGATTTGTATTATTCGCAAAGCTCTCTGGGACACTACCAGTCACCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR CCA 72 bp | AAAGTGGCCATAGTCCCCATCCCACCAGTTCCCCCTTaGACAGTTCCCTGTGCACAGACAGGGAGGCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: KVAIVPIPPVPP*TVPCAQTGRPG Trigger: TCCAGGCCTCCCTGTCTGTGCACAGGGAACTGTCCAAGGGGGAACTGGTGGGATGGGGACTATGGCCACTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR CCA 72 bp | GCATATGCTTGCTGCCCCTGTACCTGGGGACAGAAGTaGGAGCTGCTTGGGAAGGGTTCCCTCTGGTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: AYACCPCTWGQK*ELLGKGSLWFL Trigger: CAAGAACCAGAGGGAACCCTTCCCAAGCAGCTCCCACTTCTGTCCCCAGGTACAGGGGCAGCAAGCATATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR CCA 72 bp | CAAGCACACATTTTCCATTCACACACCACTCCACTCTaGGGCAGGCAGGTGGCTCATTTGGAGGCCCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QAHIFHSHTTPL*GRQVAHLEALA Trigger: TGCCAGGGCCTCCAAATGAGCCACCTGCCTGCCCCAGAGTGGAGTGGTGTGTGAATGGAAAATGTGTGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR CCA 72 bp | AACCAACTAAAGGCATATGCTTGCTGCCCCTGTACCTaGGGACAGAAGTGGGAGCTGCTTGGGAAGGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: NQLKAYACCPCT*GQKWELLGKGS Trigger: GGAACCCTTCCCAAGCAGCTCCCACTTCTGTCCCCAGGTACAGGGGCAGCAAGCATATGCCTTTAGTTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR CCA 72 bp | CCCTTGGACAGTTCCCTGTGCACAGACAGGGAGGCCTaGAACAGTATGGGGGTCTTTGAAATGTGCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PLDSSLCTDREA*NSMGVFEMCKG Trigger: GCCTTTGCACATTTCAAAGACCCCCATACTGTTCCAGGCCTCCCTGTCTGTGCACAGGGAACTGTCCAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR CCA 72 bp | GACCCAGGAAGGCCACACTTTATTGTCCAGTCAGCCTaGGTGACTGGTAGTGTCCCAGAGAGCTTTGCGAAT | + |
|
Preference number: 3 (lower is better) Translates to: DPGRPHFIVQSA*VTGSVPESFAN Trigger: ATTCGCAAAGCTCTCTGGGACACTACCAGTCACCCAGGCTGACTGGACAATAAAGTGTGGCCTTCCTGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTAAGGAGATTAGTAAACCCAACCAACTAAAGGCATATGCTTGCTGCCCCAGAAGTGGGAGCTGCTaGGGAAGGGTTCCCTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TAKEISKPNQLKAYACCPRSGSC*GRVPSG Trigger: ACCAGAGGGAACCCTTCCCAAGCAGCTCCCACTTCT...GGGGCAGCAAGCATATGCCTTTAGTTGGTTGGGTTTACTAATCTCCTTAGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR GCA 72 bp | GAGATTAGTAAACCCAACCAACTAAAGGCATATGCTTaGTGCCCCTGTACCTGGGGACAGAAGTGGGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EISKPNQLKAYA*CPCTWGQKWEL Trigger: CAGCTCCCACTTCTGTCCCCAGGTACAGGGGCAGCAAGCATATGCCTTTAGTTGGTTGGGTTTACTAATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR TCA 72 bp | GGGGTTAAGGGAAGGGTTGGGAATGACCTTCTAAAGTaGAGCCAGAGGAGAACTGGGAGACAACTCCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: GVKGRVGNDLLK*SQRRTGRQLPK Trigger: TTTAGGGAGTTGTCTCCCAGTTCTCCTCTGGCTTCACTTTAGAAGGTCATTCCCAACCCTTCCCTTAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR TCA 72 bp | CAGGAAGGCCACACTTTATTGTCCAGTCAGCCTGGGTaGCTGGTAGTGTCCCAGAGAGCTTTGCGAATAATA | + |
|
Preference number: 3 (lower is better) Translates to: QEGHTLLSSQPG*LVVSQRALRII Trigger: TATTATTCGCAAAGCTCTCTGGGACACTACCAGTCACCCAGGCTGACTGGACAATAAAGTGTGGCCTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR TCA 72 bp | ACAGTATGGGGGTCTTTGAAATGTGCAAAGGCTTCTTaGACAGCAAGACCTGTTCAAAGCCCCCTAGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TVWGSLKCAKAS*TARPVQSPLAR Trigger: CCTGGCTAGGGGGCTTTGAACAGGTCTTGCTGTTCAAGAAGCCTTTGCACATTTCAAAGACCCCCATACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR GCA 72 bp | ATTAGTAAACCCAACCAACTAAAGGCATATGCTTGCTaGCCCTGTACCTGGGGACAGAAGTGGGAGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ISKPNQLKAYAC*PCTWGQKWELL Trigger: AAGCAGCTCCCACTTCTGTCCCCAGGTACAGGGGCAGCAAGCATATGCCTTTAGTTGGTTGGGTTTACTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTAGGATCATGCCTTGACCCAGGAAGGCCACACTTTATTGTCCAGTCAGCCGTGTCCCAGAGAGCTTaGCGAATAATACAAATCATT | + |
|
Preference number: 3 (lower is better) Translates to: WLGSCLDPGRPHFIVQSAVSQRA*RIIQII Trigger: AATGATTTGTATTATTCGCAAAGCTCTCTGGGACAC...GGCTGACTGGACAATAAAGTGTGGCCTTCCTGGGTCAAGGCATGATCCTAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR TCA 90 bp | ACACATTTTCCATTCACACACCACTCCACTCTGGGGCAGGCAGGTGGCTCATTTATGCCGAGGCGCAGCTaGAGGCGCGGACCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: THFPFTHHSTLGQAGGSFMPRRS*RRGPHR Trigger: CCTGTGGGGTCCGCGCCTTCAGCTGCGCCTCGGCAT...AAATGAGCCACCTGCCTGCCCCAGAGTGGAGTGGTGTGTGAATGGAAAATGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR TCA 90 bp | ACACATTTTCCATTCACACACCACTCCACTCTGGGGCAGGCAGGTGGCTCATTTGGCTGCTCCCACAGGTaGAGCTGGAGGCGCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: THFPFTHHSTLGQAGGSFGCSHR*SWRRGA Trigger: AGCCCCGCGCCTCCAGCTTCACCTGTGGGAGCAGCC...AAATGAGCCACCTGCCTGCCCCAGAGTGGAGTGGTGTGTGAATGGAAAATGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR TCA 90 bp | AAGCAAGCACACATTTTCCATTCACACACCACTCCACTCTGGGGCAGGCAGGTGCTAAGCGAAGCGCACTaGGCGGCTGCTCCCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KQAHIFHSHTTPLWGRQVLSEAH*AAAPTG Trigger: ACCTGTGGGAGCAGCCGCTCAGTGCGCTTCGCTTAG...CACCTGCCTGCCCCAGAGTGGAGTGGTGTGTGAATGGAAAATGTGTGCTTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR CCA 90 bp | ACTAAAGGCATATGCTTGCTGCCCCTGTACCTGGGGACAGAAGTGGGAGCTGCTGGCAATCTGGCGCCCTaGGGTTGTGCCATAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TKGICLLPLYLGTEVGAAGNLAP*GCAIGE Trigger: CTCACCTATGGCACAACCCCAGGGCGCCAGATTGCC...AGCAGCTCCCACTTCTGTCCCCAGGTACAGGGGCAGCAAGCATATGCCTTTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR GCA 90 bp | ACCCAGACAGAAAGTGGCCATAGTCCCCATCCCACCAGTTCCCCCTTGGACAGTGCAGCCTCTCCCTGTTaGTCAGATTGGGTCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQTESGHSPHPTSSPLDSAASPC*SDWVTA Trigger: TGCTGTGACCCAATCTGAGCAACAGGGAGAGGCTGC...ACTGTCCAAGGGGGAACTGGTGGGATGGGGACTATGGCCACTTTCTGTCTGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR GCA 90 bp | ATTAGTAAACCCAACCAACTAAAGGCATATGCTTGCTGCCCCTGTACCTGGGGACCCTCGCAGAGCCTCTaGTCCTCGCCCTCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISKPNQLKAYACCPCTWGPSQSL*SSPSSR Trigger: CCTGCTGGAGGGCGAGGAGCAGAGGCTCTGCGAGGG...TCCCCAGGTACAGGGGCAGCAAGCATATGCCTTTAGTTGGTTGGGTTTACTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGGAGAACTGGGAGACAACTCCCTAAAAGGAGAAGGCAGAGGAGAGTGGATGGACTCCTGCACATaGTTGAGCTCGGCTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARGELGDNSLKGEGRGEWMDSCT*LSSAAS Trigger: GCTGGCAGCCGAGCTCAACCATGTGCAGGAGTCCAT...CCACTCTCCTCTGCCTTCTCCTTTTAGGGAGTTGTCTCCCAGTTCTCCTCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR TCA 90 bp | GGGTGGTTAGGATCATGCCTTGACCCAGGAAGGCCACACTTTATTGTCCAGTCACTCCACGGGAGCTGCTaGCACAGACATTCACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GWLGSCLDPGRPHFIVQSLHGSC*HRHSQS Trigger: GCTCTGTGAATGTCTGTGTCAGCAGCTCCCGTGGAG...TGACTGGACAATAAAGTGTGGCCTTCCTGGGTCAAGGCATGATCCTAACCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR CCA 90 bp | CACACATTTTCCATTCACACACCACTCCACTCTGGGGCAGGCAGGTGGCTCATTCAGCAGCCTCCAGCTTaGTGTTCTGGCACTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HTFSIHTPLHSGAGRWLIQQPPA*CSGTWH Trigger: ATGCCAAGTGCCAGAACACCAAGCTGGAGGCTGCTG...AATGAGCCACCTGCCTGCCCCAGAGTGGAGTGGTGTGTGAATGGAAAATGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR GCA 90 bp | GCGTTGAAGCAGCGTTTATTGAAACACAGATGGGGTCAACCCAGAAGGCGAGGCACAGAGGCTCCATGTTaGTCTCACAACACTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALKQRLLKHRWGQPRRRGTEAPC*SHNTCG Trigger: ACCGCAAGTGTTGTGAGAGCAACATGGAGCCTCTGT...GCCTCGCCTTCTGGGTTGACCCCATCTGTGTTTCAATAAACGCTGCTTCAACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGAACTGGGAGACAACTCCCTAAAAGGAGAAGGCAGAGGAGAGTGGCCCTCTGAGATGTGGGAATaGAGGAGACGTGTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGELGDNSLKGEGRGEWPSEMWE*RRRVSS Trigger: AGAGGAAACACGTCTCCTCCATTCCCACATCTCAGA...GGGCCACTCTCCTCTGCCTTCTCCTTTTAGGGAGTTGTCTCCCAGTTCTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR CCA 90 bp | AACAGTATGGGGGTCTTTGAAATGTGCAAAGGCTTCTTGAACAGCAAGACCTGTGGTCCAGAGGCAATCTaGCGCCCTGGGGTTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NSMGVFEMCKGFLNSKTCGPEAI*RPGVVP Trigger: TGGCACAACCCCAGGGCGCCAGATTGCCTCTGGACC...ACAGGTCTTGCTGTTCAAGAAGCCTTTGCACATTTCAAAGACCCCCATACTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR CCA 90 bp | ACACATTTTCCATTCACACACCACTCCACTCTGGGGCAGGCAGGTGGCTCATTTGAGGTGTCTGAGATGTaGGAATGGAGGAGACGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: THFPFTHHSTLGQAGGSFEVSEM*EWRRRV Trigger: AACACGTCTCCTCCATTCCCACATCTCAGACACCTC...AAATGAGCCACCTGCCTGCCCCAGAGTGGAGTGGTGTGTGAATGGAAAATGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTGACTGGTAGTGTCCCAGAGAGCTTTGCGAATAATACAAATCATTTACAACTGGAGGCGCGGGGCTaGCAAGGAGAGCAGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WVTGSVPESFANNTNHLQLEARG*QGEQES Trigger: TGACTCCTGCTCTCCTTGCCAGCCCCGCGCCTCCAG...TTGTAAATGATTTGTATTATTCGCAAAGCTCTCTGGGACACTACCAGTCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR GCA 90 bp | CCAAAGGAAGGCACAGCTAAGGAGATTAGTAAACCCAACCAACTAAAGGCATATCCCTCCATGGACTCCTaGACATGGTTGAGCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKEGTAKEISKPNQLKAYPSMDS*TWLSSA Trigger: AGCCGAGCTCAACCATGTGCAGGAGTCCATGGAGGG...ATATGCCTTTAGTTGGTTGGGTTTACTAATCTCCTTAGCTGTGCCTTCCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR CCA 90 bp | AACAGTATGGGGGTCTTTGAAATGTGCAAAGGCTTCTTGAACAGCAAGACCTGTATTCATTCTCAGAAGTaGCTCGTAGTGCCACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NSMGVFEMCKGFLNSKTCIHSQK*LVVPLP Trigger: AGGAAGTGGCACTACGAGCCACTTCTGAGAATGAAT...ACAGGTCTTGCTGTTCAAGAAGCCTTTGCACATTTCAAAGACCCCCATACTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS CCA 90 bp | CGCACTGAGCGGCTGCTCCCACAGGTGAAGCTGGAGGCGCGGGGCTaGCAAGGAGAGCAGGAGTCAGGGGCCATCACTGTGATGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RTERLLPQVKLEARG*QGEQESGAITVMLP Trigger: GGGCAGCATCACAGTGATGGCCCCTGACTCCTGCTCTCCTTGCCAGCCCCGCGCCTCCAGCTTCACCTGTGGGAGCAGCCGCTCAGTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS CCA 90 bp | GATGCTGCCCCCAGTGACAGAGGGTCCAGAGGCAATCTGGCGCCCTaGGGTTGTGCCATAGGTGAGGCCCCCACATGTGACTCCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: DAAPSDRGSRGNLAP*GCAIGEAPTCDSST Trigger: CGTGGAGGAGTCACATGTGGGGGCCTCACCTATGGCACAACCCCAGGGCGCCAGATTGCCTCTGGACCCTCTGTCACTGGGGGCAGCATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR CAA 90 bp | GCTGGGTGGTTAGGATCATGCCTTGACCCAGGAAGGCCACACTTTATTGTCCAGGGCAGCCTCTCCCTGTaGCTCAGATTGGGTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGWLGSCLDPGRPHFIVQGSLSL*LRLGHS Trigger: GCTGTGACCCAATCTGAGCAACAGGGAGAGGCTGCC...CTGGACAATAAAGTGTGGCCTTCCTGGGTCAAGGCATGATCCTAACCACCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR CAA 90 bp | TGGACAGTTCCCTGTGCACAGACAGGGAGGCCTGGAACAGTATGGGGGTCTTTGTTCATCTCCTCACACTaGGTGCGGTACCAGGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: WTVPCAQTGRPGTVWGSLFISSH*VRYQDS Trigger: TGAGTCCTGGTACCGCACCAAGTGTGAGGAGATGAA...CAAAGACCCCCATACTGTTCCAGGCCTCCCTGTCTGTGCACAGGGAACTGTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR CAA 90 bp | AGTATGGGGGTCTTTGAAATGTGCAAAGGCTTCTTGAACAGCAAGACCTGTTCAGACTCCTGCACATGGTaGAGCTCGGCTGCCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SMGVFEMCKGFLNSKTCSDSCTW*SSAASL Trigger: GAGGCTGGCAGCCGAGCTCAACCATGTGCAGGAGTC...TGAACAGGTCTTGCTGTTCAAGAAGCCTTTGCACATTTCAAAGACCCCCATACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS-3UTR CAA 90 bp | CCAAAGGAAGGCACAGCTAAGGAGATTAGTAAACCCAACCAACTAAAGGCATATAACAGAGGCTCCATGTaGCTCTCACAACACTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PKEGTAKEISKPNQLKAYNRGSM*LSQHLR Trigger: CCGCAAGTGTTGTGAGAGCAACATGGAGCCTCTGTT...ATATGCCTTTAGTTGGTTGGGTTTACTAATCTCCTTAGCTGTGCCTTCCTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS GCA 72 bp | TGGGCCCGCAGACGCCTCCAGATCGGTACCCGAAGCTaGGTCCACAGGAGCCAGAGCGGAAGGGCCCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WARRRLQIGTRS*VHRSQSGRARR Trigger: TCTGCGGGCCCTTCCGCTCTGGCTCCTGTGGACGCAGCTTCGGGTACCGATCTGGAGGCGTCTGCGGGCCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||
| CDS CCA 72 bp | CCCAGTGACAGAGGGTCCAGAGGCAATCTGGCGCCCTaGGGTTGTGCCATAGGTGAGGCCCCCACATGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: PSDRGSRGNLAP*GCAIGEAPTCD Trigger: GTCACATGTGGGGGCCTCACCTATGGCACAACCCCAGGGCGCCAGATTGCCTCTGGACCCTCTGTCACTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081945.5 |
||