Pregenerated sensors for KRT84 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044294Ensembl transcript IDs: ENSMUST00000023720.8
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGTCCCGCCCACCCCCAGACTCCCAGAGTTTGCAGACACAACCCTaGTGCAACCACAGGGCACAGAGTTGGGCCTCATATCATCACCAC | + |
|
Preference number: 1 (lower is better) Translates to: RSRPPPDSQSLQTQP*CNHRAQSWASYHHH Trigger: GTGGTGATGATATGAGGCCCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGAGTCTGGGGGTGGGCGGGACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR GCA 90 bp | TCCCGCCCACCCCCAGACTCCCAGAGTTTGCAGACACAACCCTGCTaGAACCACAGGGCACAGAGTTGGGCCTCATATCATCACCACAAG | + |
|
Preference number: 1 (lower is better) Translates to: SRPPPDSQSLQTQPC*NHRAQSWASYHHHK Trigger: CTTGTGGTGATGATATGAGGCCCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGAGTCTGGGGGTGGGCGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR GCA 90 bp | AGAGTAGTACAAACAGGTCCCGCCCACCCCCAGACTCCCAGAGTTTaGAGACACAACCCTGCTGCAACCACAGGGCACAGAGTTGGGCCT | + |
|
Preference number: 1 (lower is better) Translates to: RVVQTGPAHPQTPRV*RHNPAATTGHRVGP Trigger: AGGCCCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGAGTCTGGGGGTGGGCGGGACCTGTTTGTACTACTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR CCA 90 bp | CAGGAACTTAGGTATCCCTGGGGCCACCAAGGACTGTGTGCCCTTTaGGGTCAGGGGAGGGATGATGAAGCATCTTCTGCCAGGGAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: QELRYPWGHQGLCAL*GQGRDDEASSAREG Trigger: CCCTTCCCTGGCAGAAGATGCTTCATCATCCCTCCCCTGACCCCAAAGGGCACACAGTCCTTGGTGGCCCCAGGGATACCTAAGTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR CCA 90 bp | GACGAACCACTGGGAGAAGAACCGTCACAGGAACTTAGGTATCCCTaGGGCCACCAAGGACTGTGTGCCCTTTGGGGTCAGGGGAGGGAT | + |
|
Preference number: 1 (lower is better) Translates to: DEPLGEEPSQELRYP*GHQGLCALWGQGRD Trigger: ATCCCTCCCCTGACCCCAAAGGGCACACAGTCCTTGGTGGCCCCAGGGATACCTAAGTTCCTGTGACGGTTCTTCTCCCAGTGGTTCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR GCA 90 bp | TGCTGGCAGGAAGAGTGGCTGGAGATCCCTCAGGACCAGAGTCTGTaGACCTCAGGGGATAGGAGCAGGGGATGTTCAGCTGGTTCTTCT | + |
|
Preference number: 1 (lower is better) Translates to: CWQEEWLEIPQDQSL*TSGDRSRGCSAGSS Trigger: AGAAGAACCAGCTGAACATCCCCTGCTCCTATCCCCTGAGGTGCACAGACTCTGGTCCTGAGGGATCTCCAGCCACTCTTCCTGCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR CCA 90 bp | GCAGATAAACCAACAACCATAAGAGAAATGGCCCGGACGAACCACTaGGAGAAGAACCGTCACAGGAACTTAGGTATCCCTGGGGCCACC | + |
|
Preference number: 1 (lower is better) Translates to: ADKPTTIREMARTNH*EKNRHRNLGIPGAT Trigger: GGTGGCCCCAGGGATACCTAAGTTCCTGTGACGGTTCTTCTCCCAGTGGTTCGTCCGGGCCATTTCTCTTATGGTTGTTGGTTTATCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR TCA 90 bp | GCTTTCGGTAGTAGTGCTGAAAATACATTTACTGTGGCTGGAGCCTaGGGAGGATCCGAAGGAAAGGAATTAGGGAGAATCCTTCAGGAG | + |
|
Preference number: 1 (lower is better) Translates to: AFGSSAENTFTVAGA*GGSEGKELGRILQE Trigger: CTCCTGAAGGATTCTCCCTAATTCCTTTCCTTCGGATCCTCCTCAGGCTCCAGCCACAGTAAATGTATTTTCAGCACTACTACCGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR CAA 90 bp | AAGAGTAGTACAAACAGGTCCCGCCCACCCCCAGACTCCCAGAGTTaGCAGACACAACCCTGCTGCAACCACAGGGCACAGAGTTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: KSSTNRSRPPPDSQS*QTQPCCNHRAQSWA Trigger: GGCCCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGAGTCTGGGGGTGGGCGGGACCTGTTTGTACTACTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR-3UTR GCA 90 bp | GACTCCCAGAGTTTGCAGACACAACCCTGCTGCAACCACAGGGCACAGAGTTGGCAGGACCAGAGTCTGTaGACCTCAGGGGATAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: DSQSLQTQPCCNHRAQSWQDQSL*TSGDRS Trigger: GCTCCTATCCCCTGAGGTGCACAGACTCTGGTCCTG...CCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGGGTCAGGGGAGGGATGATGAAGCATCTTCTGCCAGGGAAGGGAAGAGGGTGCTGGCAGGAAGAGTaGCTGGAGATCCCTCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: FGVRGGMMKHLLPGKGRGCWQEE*LEIPQD Trigger: GTCCTGAGGGATCTCCAGCCACTCTTCCTGCCAGCA...CCCTCTTCCCTTCCCTGGCAGAAGATGCTTCATCATCCCTCCCCTGACCCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR-3UTR CCA 90 bp | CGGACGAACCACTGGGAGAAGAACCGTCACAGGAACTTAGGTATCCCTGGGGCCGAGGGAGGGACAAGATaGGCTAAGGATGCCTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: RTNHWEKNRHRNLGIPGAEGGTR*AKDACR Trigger: TCTGCAGGCATCCTTAGCCCATCTTGTCCCTCCCTC...GGCCCCAGGGATACCTAAGTTCCTGTGACGGTTCTTCTCCCAGTGGTTCGTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR-3UTR GCA 90 bp | GACTCCCAGAGTTTGCAGACACAACCCTGCTGCAACCACAGGGCACAGAGTTGGTGGGCTAGGTTTGTGTaGTGGCAGGAAGAGTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: DSQSLQTQPCCNHRAQSWWARFV*WQEEWL Trigger: CAGCCACTCTTCCTGCCAGCACACAAACCTAGCCCA...CCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR-3UTR CCA 90 bp | GACTCCCAGAGTTTGCAGACACAACCCTGCTGCAACCACAGGGCACAGAGTTGGGCTAGGTTTGTGTGCTaGCAGGAAGAGTGGCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: DSQSLQTQPCCNHRAQSWARFVC*QEEWLE Trigger: CTCCAGCCACTCTTCCTGCCAGCACACAAACCTAGC...CCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACTCCCAGAGTTTGCAGACACAACCCTGCTGCAACCACAGGGCACAGAGTTGTACATTTACTGTGGCTaGAGCCTGAGGAGGATCCGA | + |
|
Preference number: 2 (lower is better) Translates to: RLPEFADTTLLQPQGTELYIYCG*SLRRIR Trigger: TCGGATCCTCCTCAGGCTCCAGCCACAGTAAATGTA...CAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCACAAGAACAAGGCACATGGAGCTAAAGAGACCACCTCTCCATATGAACTCCGGACTGTGTGCCCTTTaGGGTCAGGGGAGGGATGAT | + |
|
Preference number: 2 (lower is better) Translates to: TTRTRHMELKRPPLHMNSGLCAL*GQGRDD Trigger: ATCATCCCTCCCCTGACCCCAAAGGGCACACAGTCC...GGAGTTCATATGGAGAGGTGGTCTCTTTAGCTCCATGTGCCTTGTTCTTGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCACAAGAACAAGGCACATGGAGCTAAAGAGACCACCTCTCCATATGAACTCCCAGGGGATGTTCAGCTaGTTCTTCTCTGGGCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: TTRTRHMELKRPPLHMNSQGMFS*FFSGQW Trigger: CCACTGCCCAGAGAAGAACCAGCTGAACATCCCCTG...GGAGTTCATATGGAGAGGTGGTCTCTTTAGCTCCATGTGCCTTGTTCTTGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGGGTCAGGGGAGGGATGATGAAGCATCTTCTGCCAGGGAAGGGAAGAGGGAAAATACATTTACTGTaGCTGGAGCCTGAGGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: FGVRGGMMKHLLPGKGRGKIHLL*LEPEED Trigger: ATCCTCCTCAGGCTCCAGCCACAGTAAATGTATTTT...CCCTCTTCCCTTCCCTGGCAGAAGATGCTTCATCATCCCTCCCCTGACCCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR CAA 90 bp | CACATGGAGCTAAAGAGACCACCTCTCCATATGAACTCCACCTACTaGGCAGACCCACATACCGCAGATAAACCAACAACCATAAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: HMELKRPPLHMNSTY*ADPHTADKPTTIRE Trigger: TTCTCTTATGGTTGTTGGTTTATCTGCGGTATGTGGGTCTGCCAAGTAGGTGGAGTTCATATGGAGAGGTGGTCTCTTTAGCTCCATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR GCA 72 bp | CAAACAGGTCCCGCCCACCCCCAGACTCCCAGAGTTTaGAGACACAACCCTGCTGCAACCACAGGGCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: QTGPAHPQTPRV*RHNPAATTGHR Trigger: TCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGAGTCTGGGGGTGGGCGGGACCTGTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR GCA 72 bp | GAAGAGTGGCTGGAGATCCCTCAGGACCAGAGTCTGTaGACCTCAGGGGATAGGAGCAGGGGATGTTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: EEWLEIPQDQSL*TSGDRSRGCSA Trigger: AGCTGAACATCCCCTGCTCCTATCCCCTGAGGTGCACAGACTCTGGTCCTGAGGGATCTCCAGCCACTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR GCA 72 bp | CCACCCCCAGACTCCCAGAGTTTGCAGACACAACCCTaGTGCAACCACAGGGCACAGAGTTGGGCCTCATAT | + |
|
Preference number: 3 (lower is better) Translates to: PPPDSQSLQTQP*CNHRAQSWASY Trigger: ATATGAGGCCCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGAGTCTGGGGGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR CCA 72 bp | CATGGGCTAGGTTTGTGTGCTGGCAGGAAGAGTGGCTaGAGATCCCTCAGGACCAGAGTCTGTGCACCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HGLGLCAGRKSG*RSLRTRVCAPQ Trigger: CTGAGGTGCACAGACTCTGGTCCTGAGGGATCTCCAGCCACTCTTCCTGCCAGCACACAAACCTAGCCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR CCA 72 bp | CTGGGAGAAGAACCGTCACAGGAACTTAGGTATCCCTaGGGCCACCAAGGACTGTGTGCCCTTTGGGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGEEPSQELRYP*GHQGLCALWGQ Trigger: CTGACCCCAAAGGGCACACAGTCCTTGGTGGCCCCAGGGATACCTAAGTTCCTGTGACGGTTCTTCTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR GCA 72 bp | GGAGAATCCTTCAGGAGGACATGGGCTAGGTTTGTGTaGTGGCAGGAAGAGTGGCTGGAGATCCCTCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GESFRRTWARFV*WQEEWLEIPQD Trigger: GTCCTGAGGGATCTCCAGCCACTCTTCCTGCCAGCACACAAACCTAGCCCATGTCCTCCTGAAGGATTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR GCA 72 bp | CCCCCAGACTCCCAGAGTTTGCAGACACAACCCTGCTaGAACCACAGGGCACAGAGTTGGGCCTCATATCAT | + |
|
Preference number: 3 (lower is better) Translates to: PPDSQSLQTQPC*NHRAQSWASYH Trigger: ATGATATGAGGCCCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGAGTCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR TCA 72 bp | AGTAGTGCTGAAAATACATTTACTGTGGCTGGAGCCTaGGGAGGATCCGAAGGAAAGGAATTAGGGAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: SSAENTFTVAGA*GGSEGKELGRI Trigger: GATTCTCCCTAATTCCTTTCCTTCGGATCCTCCTCAGGCTCCAGCCACAGTAAATGTATTTTCAGCACTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR TCA 90 bp | TCAGGGGATAGGAGCAGGGGATGTTCAGCTGGTTCTTCTCTGGGCAGTGGCCCCCCCGACGGCCAGAGCTaGCTCTGTAGGAGCGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGDRSRGCSAGSSLGSGPPDGQS*LCRSGK Trigger: CTTGCCGCTCCTACAGAGTCAGCTCTGGCCGTCGGG...GGGGCCACTGCCCAGAGAAGAACCAGCTGAACATCCCCTGCTCCTATCCCCTGA 63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| 3UTR CAA 72 bp | ACAAACAGGTCCCGCCCACCCCCAGACTCCCAGAGTTaGCAGACACAACCCTGCTGCAACCACAGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TNRSRPPPDSQS*QTQPCCNHRAQ Trigger: CTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGAGTCTGGGGGTGGGCGGGACCTGTTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCCAGAGTTTGCAGACACAACCCTGCTGCAACCACAGGGCACAGAGTTGGGACCAGCCCTCAGGCTTaGGGAAGCCAGAACCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPRVCRHNPAATTGHRVGTSPQA*GSQNPS Trigger: GGAGGGGTTCTGGCTTCCTCAAGCCTGAGGGCTGGT...CCCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR GCA 90 bp | CCACTGGGAGAAGAACCGTCACAGGAACTTAGGTATCCCTGGGGCCACCAAGGACAGGTGGTTCCTCTCTaGCTGCAGCCGAGCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLGEEPSQELRYPWGHQGQVVPL*LQPSLV Trigger: GACCAGGCTCGGCTGCAGGCAGAGAGGAACCACCTG...TCCTTGGTGGCCCCAGGGATACCTAAGTTCCTGTGACGGTTCTTCTCCCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGTTTGCAGACACAACCCTGCTGCAACCACAGGGCACAGAGTTGGGCCTCGTAGATTGTCACAGTaGTGGCCAGCGGTCACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PRVCRHNPAATTGHRVGPRRLSQ*WPAVTR Trigger: GCGGGTGACCGCTGGCCAGCACTGTGACAATCTACG...AGGCCCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCACCTCAGGGGATAGGAGCAGGGGATGTTCAGCTGGTTCTTCTCTGGGCAGGAGGTGGTGGTAGATaGGAAGCGGACGCTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CAPQGIGAGDVQLVLLWAGGGGR*EADAGA Trigger: AGCTCCAGCGTCCGCTTCTCATCTACCACCACCTCC...TGCCCAGAGAAGAACCAGCTGAACATCCCCTGCTCCTATCCCCTGAGGTGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR GCA 90 bp | CGGACGAACCACTGGGAGAAGAACCGTCACAGGAACTTAGGTATCCCTGGGGCCCAAAGGCCATCCCACTaGCAGCTCCAAAGCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RTNHWEKNRHRNLGIPGAQRPSH*QLQSQL Trigger: GAGTTGGCTTTGGAGCTGGCAGTGGGATGGCCTTTG...GGCCCCAGGGATACCTAAGTTCCTGTGACGGTTCTTCTCCCAGTGGTTCGTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CCA 90 bp | AACCGTCACAGGAACTTAGGTATCCCTGGGGCCACCAAGGACTGTGTGCCCTTTGCCTGCAGCCGAGCCTaGTCACTGCTTAGGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: NRHRNLGIPGATKDCVPFACSRA*SLLRTS Trigger: GGATGTCCTAAGCAGTGACCAGGCTCGGCTGCAGGC...AAAGGGCACACAGTCCTTGGTGGCCCCAGGGATACCTAAGTTCCTGTGACGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CCA 90 bp | GTTTGTGTGCTGGCAGGAAGAGTGGCTGGAGATCCCTCAGGACCAGAGTCTGTGAGATTGTCACAGTGCTaGCCAGCGGTCACCCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VCVLAGRVAGDPSGPESVRLSQC*PAVTRI Trigger: GATGCGGGTGACCGCTGGCCAGCACTGTGACAATCT...CACAGACTCTGGTCCTGAGGGATCTCCAGCCACTCTTCCTGCCAGCACACAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCACCTCAGGGGATAGGAGCAGGGGATGTTCAGCTGGTTCTTCTCTGGGCATGCACTTGGCATCATTaGGGGCTGCTTCACCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CAPQGIGAGDVQLVLLWACTWHH*GLLHPA Trigger: AGCAGGGTGAAGCAGCCCTCAATGATGCCAAGTGCA...TGCCCAGAGAAGAACCAGCTGAACATCCCCTGCTCCTATCCCCTGAGGTGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR GCA 90 bp | GCAGACCCACATACCGCAGATAAACCAACAACCATAAGAGAAATGGCCCGGACGAGCCAGGCCCACTCCTaGAGGAGACAGAGCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: ADPHTADKPTTIREMARTSQAHS*RRQSWT Trigger: GGTCCAGCTCTGTCTCCTGCAGGAGTGGGCCTGGCT...CGTCCGGGCCATTTCTCTTATGGTTGTTGGTTTATCTGCGGTATGTGGGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCACCTCAGGGGATAGGAGCAGGGGATGTTCAGCTGGTTCTTCTCTGGGCAAGGATGTCTTGCAGGTaGTTCCTCTCTGCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CAPQGIGAGDVQLVLLWARMSCR*FLSACS Trigger: GCTGCAGGCAGAGAGGAACCACCTGCAAGACATCCT...TGCCCAGAGAAGAACCAGCTGAACATCCCCTGCTCCTATCCCCTGAGGTGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGGAAGAGTGGCTGGAGATCCCTCAGGACCAGAGTCTGTGCACCTCAGGTCTGCTTTCAGCCTCTaGATCAACCGGGTCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LAGRVAGDPSGPESVHLRSAFSL*INRVSS Trigger: TGAACTGACCCGGTTGATCCAGAGGCTGAAAGCAGA...CCTGAGGTGCACAGACTCTGGTCCTGAGGGATCTCCAGCCACTCTTCCTGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR TCA 90 bp | GCAGACCCACATACCGCAGATAAACCAACAACCATAAGAGAAATGGCCCGGACGATCACCCACCAGCACTaGGCCTCCTCTGGACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ADPHTADKPTTIREMARTITHQH*ASSGPR Trigger: TCTGGGTCCAGAGGAGGCTCAGTGCTGGTGGGTGAT...CGTCCGGGCCATTTCTCTTATGGTTGTTGGTTTATCTGCGGTATGTGGGTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CCA 90 bp | AGTACAAACAGGTCCCGCCCACCCCCAGACTCCCAGAGTTTGCAGACACAACCCCATTGTGGGAAAGGCTaGATCCAGAGACTAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: STNRSRPPPDSQSLQTQPHCGKG*IQRLTR Trigger: CCGAGTTAGTCTCTGGATCCAGCCTTTCCCACAATG...GGGTTGTGTCTGCAAACTCTGGGAGTCTGGGGGTGGGCGGGACCTGTTTGTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR TCA 90 bp | CCACTGGGAGAAGAACCGTCACAGGAACTTAGGTATCCCTGGGGCCACCAAGGAGCCTCCGCAGGTTGGTaGTATAGTTATCGAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLGEEPSQELRYPWGHQGASAGW*YSYRRE Trigger: CTCTCTTCGATAACTATATCACCAACCTGCGGAGGC...TCCTTGGTGGCCCCAGGGATACCTAAGTTCCTGTGACGGTTCTTCTCCCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR TCA 90 bp | GCACATGGAGCTAAAGAGACCACCTCTCCATATGAACTCCACCTACTTGGCAGACACCACTGCAGCTACTaGAGCCTCCCTCAGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHGAKETTSPYELHLLGRHHCSY*SLPQWA Trigger: TGCCCACTGAGGGAGGCTTCAGTAGCTGCAGTGGTG...TCTGCCAAGTAGGTGGAGTTCATATGGAGAGGTGGTCTCTTTAGCTCCATGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR GCA 90 bp | AGTACAAACAGGTCCCGCCCACCCCCAGACTCCCAGAGTTTGCAGACACAACCCGGTATGCTCGATCTCTaGTTTCAGCCTCTGGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: STNRSRPPPDSQSLQTQPGMLDL*FQPLDQ Trigger: TTGATCCAGAGGCTGAAAGCAGAGATCGAGCATACC...GGGTTGTGTCTGCAAACTCTGGGAGTCTGGGGGTGGGCGGGACCTGTTTGTACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR GCA 90 bp | AGAACAAGGCACATGGAGCTAAAGAGACCACCTCTCCATATGAACTCCACCTACCTCCGGTGGCACGGATaGTGCTGCTGGTGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTRHMELKRPPLHMNSTYLRWHG*CCWWRR Trigger: CCTTCTCCACCAGCAGCAGCATCCGTGCCACCGGAG...GTAGGTGGAGTTCATATGGAGAGGTGGTCTCTTTAGCTCCATGTGCCTTGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGGGATAGGAGCAGGGGATGTTCAGCTGGTTCTTCTCTGGGCAGTGGCCCCCACAGATATGTTTACTaGCCCAACTCCTTCGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SGDRSRGCSAGSSLGSGPHRYVY*PNSFAD Trigger: ATCTGCGAAGGAGTTGGGCCAGTAAACATATCTGTG...GGGGCCACTGCCCAGAGAAGAACCAGCTGAACATCCCCTGCTCCTATCCCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR TCA 90 bp | GCAGACCCACATACCGCAGATAAACCAACAACCATAAGAGAAATGGCCCGGACGCTGAGGGGCCATTGCTaGGCAAGAACTGAAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ADPHTADKPTTIREMARTLRGHC*ARTEAS Trigger: GGAAGCTTCAGTTCTTGCTCAGCAATGGCCCCTCAG...CGTCCGGGCCATTTCTCTTATGGTTGTTGGTTTATCTGCGGTATGTGGGTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGAGTTTGCAGACACAACCCTGCTGCAACCACAGGGCACAGAGTTGGGCCTTGAGGGTCTTGATCTaGTCCTTTTCGTCTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQSLQTQPCCNHRAQSWALRVLI*SFSSLF Trigger: GAAGAGAGACGAAAAGGAGCAGATCAAGACCCTCAA...GGCCCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR GCA 90 bp | AGACTCCCAGAGTTTGCAGACACAACCCTGCTGCAACCACAGGGCACAGAGTTGAGAGAGGCTCCAGATTaGTCCGGGCACATTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLPEFADTTLLQPQGTELREAPD*SGHISV Trigger: AACAGAAATGTGCCCGGAGCAATCTGGAGCCTCTCT...CAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGTTGGGCCTCATATCATCACCACAAGAACAAGGCACATGGAGCTAAAGAGGCTGCTTCACCCTGCTaGTCTGCCTCAGCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSWASYHHHKNKAHGAKEAASPC*SASATA Trigger: TGCTGTGGCTGAGGCAGAGCAGCAGGGTGAAGCAGC...CTCTTTAGCTCCATGTGCCTTGTTCTTGTGGTGATGATATGAGGCCCAACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGGGTCAGGGGAGGGATGATGAAGCATCTTCTGCCAGGGAAGGGAAGAGGGCACCTCCTCGAGAGCTaGTCACAGATATGTTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: FGVRGGMMKHLLPGKGRGHLLES*SQICLL Trigger: CAGTAAACATATCTGTGAGCAGCTCTCGAGGAGGTG...CCCTCTTCCCTTCCCTGGCAGAAGATGCTTCATCATCCCTCCCCTGACCCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGAGTGGCTGGAGATCCCTCAGGACCAGAGTCTGTGCACCTCAGGGGATAGGAGTTTATTCTGTTaGTCCAGAAACCTCACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QEEWLEIPQDQSLCTSGDRSLFC*SRNLTL Trigger: TAAGGTGAGGTTTCTGGAGCAACAGAATAAACTCCT...ATCCCCTGAGGTGCACAGACTCTGGTCCTGAGGGATCTCCAGCCACTCTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR GCA 90 bp | GCACATGGAGCTAAAGAGACCACCTCTCCATATGAACTCCACCTACTTGGCAGACTTAGGACATCCAGCTaGCTCCGCAGGTTGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: AHGAKETTSPYELHLLGRLRTSS*LRRLVI Trigger: TATCACCAACCTGCGGAGGCAGCTGGATGTCCTAAG...TCTGCCAAGTAGGTGGAGTTCATATGGAGAGGTGGTCTCTTTAGCTCCATGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CCA 90 bp | AGAACAAGGCACATGGAGCTAAAGAGACCACCTCTCCATATGAACTCCACCTACTGCAGGAGACAGAGCTaGACCGGAAGCGGTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RTRHMELKRPPLHMNSTYCRRQS*TGSGSD Trigger: ATCTGAACCGCTTCCGGTCCAGCTCTGTCTCCTGCA...GTAGGTGGAGTTCATATGGAGAGGTGGTCTCTTTAGCTCCATGTGCCTTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAGAACCGTCACAGGAACTTAGGTATCCCTGGGGCCACCAAGGACTGTGTGTGTCCATCTTCACGATaGCAGATGTCTCTGATATGT | + |
|
Preference number: 4 (lower is better) Translates to: EKNRHRNLGIPGATKDCVCPSSR*QMSLIC Trigger: ACATATCAGAGACATCTGTCATCGTGAAGATGGACA...CACACAGTCCTTGGTGGCCCCAGGGATACCTAAGTTCCTGTGACGGTTCTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGGGAGAAGAACCGTCACAGGAACTTAGGTATCCCTGGGGCCACCAAGGAAGGAATTCAGTTTCCTaGATCAGAGTATCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: PLGEEPSQELRYPWGHQGRNSVS*IRVSTL Trigger: CAATGTGGATACTCTGATCCAGGAAACTGAATTCCT...TCCTTGGTGGCCCCAGGGATACCTAAGTTCCTGTGACGGTTCTTCTCCCAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGTTGGGCCTCATATCATCACCACAAGAACAAGGCACATGGAGCTAAAGAGTCTGATATGTGTGATTaGAGCATCTCGATTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSWASYHHHKNKAHGAKESDMCD*SISISS Trigger: TGAGGAAATCGAGATGCTGCAATCACACATATCAGA...CTCTTTAGCTCCATGTGCCTTGTTCTTGTGGTGATGATATGAGGCCCAACTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS GCA 90 bp | TCCGACTACCAAAACCACCCAAGCCCCGGAAGCCAGGCCCACTCCTaGAGGAGACAGAGCTGGACCGGAAGCGGTTCAGATGCTGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SDYQNHPSPGSQAHS*RRQSWTGSGSDAEG Trigger: CCCCTCAGCATCTGAACCGCTTCCGGTCCAGCTCTGTCTCCTGCAGGAGTGGGCCTGGCTTCCGGGGCTTGGGTGGTTTTGGTAGTCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS TCA 90 bp | CCACTCCTGCAGGAGACAGAGCTGGACCGGAAGCGGTTCAGATGCTaGGGGGCCATTGCTGAGCAAGAACTGAAGCTTCCCACCCGACGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLQETELDRKRFRC*GAIAEQELKLPTRR Trigger: CCGTCGGGTGGGAAGCTTCAGTTCTTGCTCAGCAATGGCCCCTCAGCATCTGAACCGCTTCCGGTCCAGCTCTGTCTCCTGCAGGAGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS CCA 90 bp | GTGGCACGGATGCTGCTGCTGGTGGAGAAGGTGACTCCACCATTGTaGGAAAGGCTGGATCCAGAGACTAACTCGGGCCCACACAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: VARMLLLVEKVTPPL*ERLDPETNSGPHST Trigger: TGTGCTGTGTGGGCCCGAGTTAGTCTCTGGATCCAGCCTTTCCCACAATGGTGGAGTCACCTTCTCCACCAGCAGCAGCATCCGTGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAGTTTGCAGACACAACCCTGCTGCAACCACAGGGCACAGAGTTGGGCCTCAACTCATTCTCGGCATaGGCCCGGAATACCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PEFADTTLLQPQGTELGLNSFSA*ARNTTS Trigger: GGAGGTGGTATTCCGGGCCAATGCCGAGAATGAGTT...GAGGCCCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGAGTTTGCAGACACAACCCTGCTGCAACCACAGGGCACAGAGTTGGGCCTTTGCACTTGGCATCATaGAGGGCTGCTTCACCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PRVCRHNPAATTGHRVGPLHLAS*RAASPC Trigger: GCAGGGTGAAGCAGCCCTCAATGATGCCAAGTGCAA...AGGCCCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGGGATAGGAGCAGGGGATGTTCAGCTGGTTCTTCTCTGGGCAGTGGCCCCAAGGTGACTCCACCATaGTGGGAAAGGCTGGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGDRSRGCSAGSSLGSGPKVTPP*WERLDP Trigger: TGGATCCAGCCTTTCCCACAATGGTGGAGTCACCTT...GGGGCCACTGCCCAGAGAAGAACCAGCTGAACATCCCCTGCTCCTATCCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS CCA 90 bp | CCCACACAGCACACCTCCTCGAGAGCTGCTCACAGATATGTTTACTaGCCCAACTCCTTCGCAGATCCGAATTTCCTCGCCCTCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PTQHTSSRAAHRYVY*PNSFADPNFLALQQ Trigger: CTGCTGGAGGGCGAGGAAATTCGGATCTGCGAAGGAGTTGGGCCAGTAAACATATCTGTGAGCAGCTCTCGAGGAGGTGTGCTGTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAGTTTGCAGACACAACCCTGCTGCAACCACAGGGCACAGAGTTGGGCCTCGAGGATGATCCAAAGTaGATGACGCTCCGACTACCA | + |
|
Preference number: 5 (lower is better) Translates to: PEFADTTLLQPQGTELGLEDDPK*MTLRLP Trigger: TGGTAGTCGGAGCGTCATCAACTTTGGATCATCCTC...GAGGCCCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGAGTTTGCAGACACAACCCTGCTGCAACCACAGGGCACAGAGTTGGGCCTGGCACATTTCTGTTCTaGGAGGAAGCTCCACTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PRVCRHNPAATTGHRVGPGTFLF*EEAPLG Trigger: ACCAAGTGGAGCTTCCTCCAAGAACAGAAATGTGCC...AGGCCCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS GCA 90 bp | ATCCAGAGACTAACTCGGGCCCACACAGCACACCTCCTCGAGAGCTaGTCACAGATATGTTTACTGGCCCAACTCCTTCGCAGATCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: IQRLTRAHTAHLLES*SQICLLAQLLRRSE Trigger: TTCGGATCTGCGAAGGAGTTGGGCCAGTAAACATATCTGTGAGCAGCTCTCGAGGAGGTGTGCTGTGTGGGCCCGAGTTAGTCTCTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGAGTAGTACAAACAGGTCCCGCCCACCCCCAGACTCCCAGAGTTTGCAGAAACCGGGTCAGTTCATaGATCTCGTCCCGTGTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: QRVVQTGPAHPQTPRVCRNRVSS*ISSRVL Trigger: TAGCACACGGGACGAGATCAATGAACTGACCCGGTT...TCTGCAAACTCTGGGAGTCTGGGGGTGGGCGGGACCTGTTTGTACTACTCTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS CCA 90 bp | TCCTCTTCATACTTCTTCTTGAAGCCCTCAAGGATGTCTTGCAGGTaGTTCCTCTCTGCCTGCAGCCGAGCCTGGTCACTGCTTAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SSSYFFLKPSRMSCR*FLSACSRAWSLLRT Trigger: TGTCCTAAGCAGTGACCAGGCTCGGCTGCAGGCAGAGAGGAACCACCTGCAAGACATCCTTGAGGGCTTCAAGAAGAAGTATGAAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CAA 90 bp | GTTTGTGTGCTGGCAGGAAGAGTGGCTGGAGATCCCTCAGGACCAGAGTCTGTGTGGAGGAAGCTCCACTaGGTCTCTAGGAGTTTATTC | + |
|
Preference number: 5 (lower is better) Translates to: VCVLAGRVAGDPSGPESVWRKLH*VSRSLF Trigger: GAATAAACTCCTAGAGACCAAGTGGAGCTTCCTCCA...CACAGACTCTGGTCCTGAGGGATCTCCAGCCACTCTTCCTGCCAGCACACAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGGGATAGGAGCAGGGGATGTTCAGCTGGTTCTTCTCTGGGCAGTGGCCCCTCTTCATACTTCTTCTaGAAGCCCTCAAGGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGDRSRGCSAGSSLGSGPSSYFF*KPSRMS Trigger: AGACATCCTTGAGGGCTTCAAGAAGAAGTATGAAGA...GGGGCCACTGCCCAGAGAAGAACCAGCTGAACATCCCCTGCTCCTATCCCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CAA 90 bp | GTAGTAGTGCTGAAAATACATTTACTGTGGCTGGAGCCTGAGGAGGATCCGAAGGCCCTCAAGGATGTCTaGCAGGTGGTTCCTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VVVLKIHLLWLEPEEDPKALKDV*QVVPLC Trigger: GCAGAGAGGAACCACCTGCAAGACATCCTTGAGGGC...CTTCGGATCCTCCTCAGGCTCCAGCCACAGTAAATGTATTTTCAGCACTACTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAGAGTTTGCAGACACAACCCTGCTGCAACCACAGGGCACAGAGTTGGGCCATCAGAGTATCCACATaGGCTTCCAGATCAGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQSLQTQPCCNHRAQSWAIRVST*ASRSDL Trigger: CAAATCTGATCTGGAAGCCAATGTGGATACTCTGAT...GGCCCAACTCTGTGCCCTGTGGTTGCAGCAGGGTTGTGTCTGCAAACTCTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS CAA 90 bp | CTCCTCTGGACCCAGAGCTCAGCAGGTCCCCACCAGCCCTCAGGCTaGAGGAAGCCAGAACCCCTCCGGTGGCACGGATGCTGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLWTQSSAGPHQPSG*RKPEPLRWHGCCCW Trigger: CCAGCAGCAGCATCCGTGCCACCGGAGGGGTTCTGGCTTCCTCAAGCCTGAGGGCTGGTGGGGACCTGCTGAGCTCTGGGTCCAGAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS GCA 72 bp | CAAAACCACCCAAGCCCCGGAAGCCAGGCCCACTCCTaGAGGAGACAGAGCTGGACCGGAAGCGGTTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: QNHPSPGSQAHS*RRQSWTGSGSD Trigger: ATCTGAACCGCTTCCGGTCCAGCTCTGTCTCCTGCAGGAGTGGGCCTGGCTTCCGGGGCTTGGGTGGTTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS CCA 72 bp | TCTTGCAGGTGGTTCCTCTCTGCCTGCAGCCGAGCCTaGTCACTGCTTAGGACATCCAGCTGCCTCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SCRWFLSACSRA*SLLRTSSCLRR Trigger: CCTGCGGAGGCAGCTGGATGTCCTAAGCAGTGACCAGGCTCGGCTGCAGGCAGAGAGGAACCACCTGCAAGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS CAA 90 bp | CCGGTGGCACGGATGCTGCTGCTGGTGGAGAAGGTGACTCCACCATaGTGGGAAAGGCTGGATCCAGAGACTAACTCGGGCCCACACAGC | + |
|
Preference number: 6 (lower is better) Translates to: PVARMLLLVEKVTPP*WERLDPETNSGPHS Trigger: GCTGTGTGGGCCCGAGTTAGTCTCTGGATCCAGCCTTTCCCACAATGGTGGAGTCACCTTCTCCACCAGCAGCAGCATCCGTGCCACCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS TCA 72 bp | GGACCGGAAGCGGTTCAGATGCTGAGGGGCCATTGCTaGGCAAGAACTGAAGCTTCCCACCCGACGGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GPEAVQMLRGHC*ARTEASHPTAR Trigger: TCTGGCCGTCGGGTGGGAAGCTTCAGTTCTTGCTCAGCAATGGCCCCTCAGCATCTGAACCGCTTCCGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS TCA 72 bp | TGGAGCTCCTGTTACCACGACCACCACTGCAGCTACTaGAGCCTCCCTCAGTGGGCAGTGCACAGGGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: WSSCYHDHHCSY*SLPQWAVHRGC Trigger: GCATCCCCTGTGCACTGCCCACTGAGGGAGGCTTCAGTAGCTGCAGTGGTGGTCGTGGTAACAGGAGCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS CCA 72 bp | TGGCCAGCGGTCACCCGCATCTCCTCATACTTGGTCTaGTACCACGACTCCACATCTGCACGACTCCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WPAVTRISSYLV*YHDSTSARLRL Trigger: GAGGCGGAGTCGTGCAGATGTGGAGTCGTGGTACCAGACCAAGTATGAGGAGATGCGGGTGACCGCTGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS TCA 72 bp | CAGGAGACAGAGCTGGACCGGAAGCGGTTCAGATGCTaGGGGGCCATTGCTGAGCAAGAACTGAAGCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: QETELDRKRFRC*GAIAEQELKLP Trigger: GGGAAGCTTCAGTTCTTGCTCAGCAATGGCCCCTCAGCATCTGAACCGCTTCCGGTCCAGCTCTGTCTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS CCA 72 bp | ATGCTGCTGCTGGTGGAGAAGGTGACTCCACCATTGTaGGAAAGGCTGGATCCAGAGACTAACTCGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: MLLLVEKVTPPL*ERLDPETNSGP Trigger: TGGGCCCGAGTTAGTCTCTGGATCCAGCCTTTCCCACAATGGTGGAGTCACCTTCTCCACCAGCAGCAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS CAA 72 bp | GTCAGTTCATTGATCTCGTCCCGTGTGCTACGTAGATaGTCACAGTGCTGGCCAGCGGTCACCCGCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSSLISSRVLRR*SQCWPAVTRIS Trigger: GGAGATGCGGGTGACCGCTGGCCAGCACTGTGACAATCTACGTAGCACACGGGACGAGATCAATGAACTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS CCA 72 bp | CACACCTCCTCGAGAGCTGCTCACAGATATGTTTACTaGCCCAACTCCTTCGCAGATCCGAATTTCCTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: HTSSRAAHRYVY*PNSFADPNFLA Trigger: GGCGAGGAAATTCGGATCTGCGAAGGAGTTGGGCCAGTAAACATATCTGTGAGCAGCTCTCGAGGAGGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS CAA 72 bp | CATCCAACTGCTATCCGGGGTGAGGATGATCCAAAGTaGATGACGCTCCGACTACCAAAACCACCCAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HPTAIRGEDDPK*MTLRLPKPPKP Trigger: GGGCTTGGGTGGTTTTGGTAGTCGGAGCGTCATCAACTTTGGATCATCCTCACCCCGGATAGCAGTTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||
| CDS TCA 72 bp | GCTCTGGTTAACAGTTACAGCTGTGATAGCGGGGGCTaGTGGGCCTCCAATTCCTCCGATTCTGTAGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: ALVNSYSCDSGG*WASNSSDSVAK Trigger: TTTGGCTACAGAATCGGAGGAATTGGAGGCCCATCAGCCCCCGCTATCACAGCTGTAACTGTTAACCAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023720.8 |
||