Pregenerated sensors for KRT82 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049548Ensembl transcript IDs: ENSMUST00000023713.10
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTTGGGGTCTGCATCTAGATATGCGAAGGGTGGCTTTGAAGAAATaGGCGGGGCTGGGAGTAGCTCAGCTCCCAGGAGTATCCCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: AWGLHLDMRRVALKK*AGLGVAQLPGVSQG Trigger: GCCCTGGGATACTCCTGGGAGCTGAGCTACTCCCAGCCCCGCTCATTTCTTCAAAGCCACCCTTCGCATATCTAGATGCAGACCCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| 3UTR CAA 90 bp | GAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCTTTaGCAAAACAGAACAGTTGTGTGTACAGCTGGCCACCCCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ERTRAGFVRKVKWSL*QNRTVVCTAGHPSW Trigger: CCAGGAGGGGTGGCCAGCTGTACACACAACTGTTCTGTTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCTTTTGCAAAACAGAACAGTGCTGGCCACCCCTCCTaGGAGAGAAGTGGTGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: KGWLCEESEMEPFAKQNSAGHPS*ERSGGK Trigger: CTTACCACCACTTCTCTCCCAGGAGGGGTGGCCAGC...ACTGTTCTGTTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCTTTTGCAAAAAGGGCAATGTGTAGTTaGTGTGGGAAGGGAAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: RKDKGWLCEESEMEPFAKRAMCS*CGKGRV Trigger: AACTCTTCCCTTCCCACACCAACTACACATTGCCCT...TTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCTTTTGCAAAACAGAACAGTGGAAGGGAAGAGTTTTaGAATATTCTGGTCTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: KGWLCEESEMEPFAKQNSGREEF*NILVFS Trigger: GCTGAAGACCAGAATATTCCAAAACTCTTCCCTTCC...ACTGTTCTGTTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCTTTTGCAAAAAGCCCCATAGAGATGTaGTATTCAGCAATTTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: RKDKGWLCEESEMEPFAKSPIEM*YSAISE Trigger: TTCTGAAATTGCTGAATACCACATCTCTATGGGGCT...TTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| 3UTR TCA 72 bp | CTGCATCTAGATATGCGAAGGGTGGCTTTGAAGAAATaGGCGGGGCTGGGAGTAGCTCAGCTCCCAGGAGTA | + |
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Preference number: 3 (lower is better) Translates to: LHLDMRRVALKK*AGLGVAQLPGV Trigger: TACTCCTGGGAGCTGAGCTACTCCCAGCCCCGCTCATTTCTTCAAAGCCACCCTTCGCATATCTAGATGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| 3UTR CCA 72 bp | AACAGAACAGTTGTGTGTACAGCTGGCCACCCCTCCTaGGAGAGAAGTGGTGGTAAGACTATAGCCATTCTC | + |
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Preference number: 3 (lower is better) Translates to: NRTVVCTAGHPS*ERSGGKTIAIL Trigger: GAGAATGGCTATAGTCTTACCACCACTTCTCTCCCAGGAGGGGTGGCCAGCTGTACACACAACTGTTCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| 3UTR CCA 72 bp | CTCAGCTCCCAGGAGTATCCCAGGGCAATGTGTAGTTaGTGTGGGAAGGGAAGAGTTTTGGAATATTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: LSSQEYPRAMCS*CGKGRVLEYSG Trigger: ACCAGAATATTCCAAAACTCTTCCCTTCCCACACCAACTACACATTGCCCTGGGATACTCCTGGGAGCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| 3UTR CCA 72 bp | GAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATaGAGCCTTTTGCAAAACAGAACAGTTGTGTGTACA | + |
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Preference number: 3 (lower is better) Translates to: ERTRAGFVRKVK*SLLQNRTVVCT Trigger: TGTACACACAACTGTTCTGTTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| 3UTR-3UTR CAA 90 bp | GAAAGGAGATGGGGTAGAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGACTATAGCCATTCTCTaGACTGTCTTAAAGTTGACT | + |
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Preference number: 3 (lower is better) Translates to: ERRWGRKDKGWLCEESEMTIAIL*TVLKLT Trigger: AGTCAACTTTAAGACAGTCAAGAGAATGGCTATAGT...CATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTCTACCCCATCTCCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | GGAGATGGGGTAGAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCGCTCGGCCTCTAGTCTaGCGTGGTCCCCGGACACAC | + |
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Preference number: 4 (lower is better) Translates to: GDGVERTRAGFVRKVKWSARPLV*RGPRTH Trigger: GTGTGTCCGGGGACCACGGCAGACTAGAGGCCGAGC...GCTCCATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTCTACCCCATCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | AGAACAGTTGTGTGTACAGCTGGCCACCCCTCCTGGGAGAGAAGTGGTGGTAAGCCTCTGCTTCTGCTTTaGTGCGGCTGGCGATGTCGT | + |
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Preference number: 4 (lower is better) Translates to: RTVVCTAGHPSWERSGGKPLLLL*CGWRCR Trigger: ACGACATCGCCAGCCGCAGCAAAGCAGAAGCAGAGG...CTTACCACCACTTCTCTCCCAGGAGGGGTGGCCAGCTGTACACACAACTGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | TCTGTGTCCAGCTTGGGGTCTGCATCTAGATATGCGAAGGGTGGCTTTGAAGAAAGGGCGGCCTCTCCCTaGTGCTCTGCCTGGGCAATG | + |
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Preference number: 4 (lower is better) Translates to: SVSSLGSASRYAKGGFEERAASP*CSAWAM Trigger: CATTGCCCAGGCAGAGCAGCAGGGAGAGGCCGCCCT...TTCTTCAAAGCCACCCTTCGCATATCTAGATGCAGACCCCAAGCTGGACACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | ACTCTGTGTCCAGCTTGGGGTCTGCATCTAGATATGCGAAGGGTGGCTTTGAAGTGTAGAGTTCACCGGTaGCCACCACGTTGCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: TLCPAWGLHLDMRRVALKCRVHR*PPRCSP Trigger: GGGGCTGCAACGTGGTGGGCACCGGTGAACTCTACA...CTTCAAAGCCACCCTTCGCATATCTAGATGCAGACCCCAAGCTGGACACAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | TCTGTGTCCAGCTTGGGGTCTGCATCTAGATATGCGAAGGGTGGCTTTGAAGAACCAGGCCTCTGCTTCTaGTTTGCTGCGGCTGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: SVSSLGSASRYAKGGFEEPGLCF*FAAAGD Trigger: ATCGCCAGCCGCAGCAAAGCAGAAGCAGAGGCCTGG...TTCTTCAAAGCCACCCTTCGCATATCTAGATGCAGACCCCAAGCTGGACACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | AAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCTTTTGCAAAACAGCTCTCCCTGCTGCTCTaGCTGGGCAATGGCCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: KDKGWLCEESEMEPFAKQLSLLL*LGNGPL Trigger: GAGGGGGCCATTGCCCAGGCAGAGCAGCAGGGAGAG...CTGTTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CCA 90 bp | GAAAGGAGATGGGGTAGAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGGCCTCTAGTCTGCCGTaGTCCCCGGACACACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: ERRWGRKDKGWLCEESEMASSLP*SPDTQS Trigger: GGACTGTGTGTCCGGGGACCACGGCAGACTAGAGGC...CATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTCTACCCCATCTCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR TCA 90 bp | GGAGATGGGGTAGAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCTGCATCGCTGGCCTTTaGCTGCCTCAATGTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GDGVERTRAGFVRKVKWSCIAGL*LPQCPA Trigger: AGCAGGACATTGAGGCAGTCAAAGGCCAGCGATGCA...GCTCCATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTCTACCCCATCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | ACTCTGTGTCCAGCTTGGGGTCTGCATCTAGATATGCGAAGGGTGGCTTTGAAGACTGCCTCAATGTCCTaGTGCAGCCGCTGGATTAGC | + |
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Preference number: 4 (lower is better) Translates to: TLCPAWGLHLDMRRVALKTASMS*CSRWIS Trigger: GCTAATCCAGCGGCTGCAGCAGGACATTGAGGCAGT...CTTCAAAGCCACCCTTCGCATATCTAGATGCAGACCCCAAGCTGGACACAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR TCA 90 bp | AGAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCTTTTGCAAAATGCACTTGGCATCAGTaGGGGCGGCCTCTCCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RKDKGWLCEESEMEPFAKCTWHQ*GRPLPA Trigger: AGCAGGGAGAGGCCGCCCTCACTGATGCCAAGTGCA...TTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR TCA 90 bp | ACTCTGTGTCCAGCTTGGGGTCTGCATCTAGATATGCGAAGGGTGGCTTTGAAGCACCTTTGGAGCTGCTaGCAGAGATATTCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TLCPAWGLHLDMRRVALKHLWSC*QRYSQA Trigger: GGCCTGTGAATATCTCTGTCAGCAGCTCCAAAGGTG...CTTCAAAGCCACCCTTCGCATATCTAGATGCAGACCCCAAGCTGGACACAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | AGAACAGTTGTGTGTACAGCTGGCCACCCCTCCTGGGAGAGAAGTGGTGGTAAGCAACTTCTCTGCTGCTaGATGAAGTTCCACTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: RTVVCTAGHPSWERSGGKQLLCC*MKFHLV Trigger: GACCAAGTGGAACTTCATGCAGCAGCAGAGAAGTTG...CTTACCACCACTTCTCTCCCAGGAGGGGTGGCCAGCTGTACACACAACTGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | AAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCTTTTGCAAAACAGCCTTCACACAACCTGTaGTCCTCGCCCTCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KDKGWLCEESEMEPFAKQPSHNL*SSPSSR Trigger: CCTGCTGGAGGGCGAGGAGCACAGGTTGTGTGAAGG...CTGTTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CCA 90 bp | AAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCTTTTGCAAAACAGCAGAAGATCCACAGGTaGCTCCCGCTCGGTACCCGA | + |
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Preference number: 4 (lower is better) Translates to: KDKGWLCEESEMEPFAKQQKIHR*LPLGTR Trigger: TCGGGTACCGAGCGGGAGCCACCTGTGGATCTTCTG...CTGTTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CCA 90 bp | GGAGATGGGGTAGAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCGTAGGTTGTCACAGTaGTTCCCAGCCGTTAACCTC | + |
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Preference number: 4 (lower is better) Translates to: GDGVERTRAGFVRKVKWSRRLSQ*FPAVNL Trigger: GAGGTTAACGGCTGGGAACCACTGTGACAACCTACG...GCTCCATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTCTACCCCATCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR TCA 90 bp | GAAAGGAGATGGGGTAGAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAAGTCTCTGAGATCTaGGACTGCAGCAGGCCGATC | + |
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Preference number: 4 (lower is better) Translates to: ERRWGRKDKGWLCEESEMEVSEI*DCSRPI Trigger: GATCGGCCTGCTGCAGTCTCAGATCTCAGAGACTTC...CATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTCTACCCCATCTCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | GAAAGGAGATGGGGTAGAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGTCGCTGGCCTTTGACTaGCTCAATGTCCTGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: ERRWGRKDKGWLCEESEMSLAFD*LNVLLQ Trigger: CTGCAGCAGGACATTGAGGCAGTCAAAGGCCAGCGA...CATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTCTACCCCATCTCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CCA 90 bp | ACTCTGTGTCCAGCTTGGGGTCTGCATCTAGATATGCGAAGGGTGGCTTTGAAGTCCTGCTGCAGCCGCTaGATTAGCTTGTTCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: TLCPAWGLHLDMRRVALKSCCSR*ISLFIS Trigger: GGAAATGAACAAGCTAATCCAGCGGCTGCAGCAGGA...CTTCAAAGCCACCCTTCGCATATCTAGATGCAGACCCCAAGCTGGACACAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CCA 90 bp | AGAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCTTTTGCAAAACCCCCACCTTCATGCTaGAGCTCCGCCCATTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RKDKGWLCEESEMEPFAKPPPSC*SSAHFH Trigger: GTGGAAATGGGCGGAGCTCCAGCATGAAGGTGGGGG...TTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CCA 90 bp | AGGGAAAGGAGATGGGGTAGAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAACTAGAGCCTCCAAGTTaGTTTCCAGGTCAGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RERRWGRKDKGWLCEESELEPPS*FPGQPS Trigger: TGAAGGCTGACCTGGAAACCAACTTGGAGGCTCTAG...TTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTCTACCCCATCTCCTTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | AGAACAGTTGTGTGTACAGCTGGCCACCCCTCCTGGGAGAGAAGTGGTGGTAAGTTCAGGCACTTAATCTaGTCCTTTTCATCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RTVVCTAGHPSWERSGGKFRHLI*SFSSLF Trigger: GAAGAGAGATGAAAAGGAGCAGATTAAGTGCCTGAA...CTTACCACCACTTCTCTCCCAGGAGGGGTGGCCAGCTGTACACACAACTGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | AAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCTTTTGCAAAACAGAACAGTCTGCTTCTGCTTTGCTaGGGCTGGCGATGTCGTCAT | + |
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Preference number: 4 (lower is better) Translates to: KGWLCEESEMEPFAKQNSLLLLC*GWRCRH Trigger: ATGACGACATCGCCAGCCGCAGCAAAGCAGAAGCAG...ACTGTTCTGTTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| 3UTR CAA 72 bp | AGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCTTTaGCAAAACAGAACAGTTGTGTGTACAGCTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RAGFVRKVKWSL*QNRTVVCTAGH Trigger: GTGGCCAGCTGTACACACAACTGTTCTGTTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | TTTTGGAATATTCTGGTCTTCAGCCCCATAGAGATGTGGTATTCAGCAATTTCACTGGTACCAGGCCTCTaGTTCTGCTTTGCTGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: FWNILVFSPIEMWYSAISLVPGL*FCFAAA Trigger: AGCCGCAGCAAAGCAGAAGCAGAGGCCTGGTACCAG...TGAAATTGCTGAATACCACATCTCTATGGGGCTGAAGACCAGAATATTCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CCA 90 bp | TTTTGGAATATTCTGGTCTTCAGCCCCATAGAGATGTGGTATTCAGCAATTTCACTGCTTTGCTGCGGCTaGCGATGTCGTCATACTGGG | + |
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Preference number: 4 (lower is better) Translates to: FWNILVFSPIEMWYSAISLLCCG*RCRHTG Trigger: CCCAGTATGACGACATCGCCAGCCGCAGCAAAGCAG...TGAAATTGCTGAATACCACATCTCTATGGGGCTGAAGACCAGAATATTCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CCA 90 bp | TTTTGGAATATTCTGGTCTTCAGCCCCATAGAGATGTGGTATTCAGCAATTTCATCCTCATACCGGCACTaGTACCAGGCCTCTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FWNILVFSPIEMWYSAISSSYRH*YQASAS Trigger: AGAAGCAGAGGCCTGGTACCAGTGCCGGTATGAGGA...TGAAATTGCTGAATACCACATCTCTATGGGGCTGAAGACCAGAATATTCCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | GAGAGAAGTGGTGGTAAGACTATAGCCATTCTCTTGACTGTCTTAAAGTTGACTTGGCAACTTCTCTGCTaGTGCATGAAGTTCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: ERSGGKTIAILLTVLKLTWQLLC*CMKFHL Trigger: CAAGTGGAACTTCATGCAGCAGCAGAGAAGTTGCCA...AGTCAACTTTAAGACAGTCAAGAGAATGGCTATAGTCTTACCACCACTTCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | GAGAGAAGTGGTGGTAAGACTATAGCCATTCTCTTGACTGTCTTAAAGTTGACTTCTCATTTTTGCGGTTaGGTAGGTTGTCACAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: ERSGGKTIAILLTVLKLTSHFCG*VGCHSG Trigger: ACCACTGTGACAACCTACGCAACCGCAAAAATGAGA...AGTCAACTTTAAGACAGTCAAGAGAATGGCTATAGTCTTACCACCACTTCTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR GCA 90 bp | CTTTGTGAGGAAAGTGAAATGGAGCCTTTTGCAAAACAGAACAGTTGTGTGTACCTTGTTGATGAAGGATaGGAATCGGTTATTCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: LCEESEMEPFAKQNSCVYLVDEG*ESVIQA Trigger: TGCCTGAATAACCGATTCGCATCCTTCATCAACAAG...GTACACACAACTGTTCTGTTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS GCA 90 bp | GCATGCCGCATCTGGAGGCCACACGGGGCCTCCCGAAACCCACGTTaGACAGGCTCCGAGAGCCAAGGCAACCCAGGGCTCGGAGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: ACRIWRPHGASRNPR*TGSESQGNPGLGGP Trigger: GGGGCCTCCGAGCCCTGGGTTGCCTTGGCTCTCGGAGCCTGTGCAACGTGGGTTTCGGGAGGCCCCGTGTGGCCTCCAGATGCGGCATGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CCA 90 bp | CACAGGTGGCTCCCGCTCGGTACCCGAAGCCTGGCATGCCGCATCTaGAGGCCACACGGGGCCTCCCGAAACCCACGTTGCACAGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: HRWLPLGTRSLACRI*RPHGASRNPRCTGS Trigger: GGAGCCTGTGCAACGTGGGTTTCGGGAGGCCCCGTGTGGCCTCCAGATGCGGCATGCCAGGCTTCGGGTACCGAGCGGGAGCCACCTGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CCA 90 bp | GCAGGCAGAAGATCCACAGGTGGCTCCCGCTCGGTACCCGAAGCCTaGCATGCCGCATCTGGAGGCCACACGGGGCCTCCCGAAACCCAC | + |
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Preference number: 5 (lower is better) Translates to: AGRRSTGGSRSVPEA*HAASGGHTGPPETH Trigger: GTGGGTTTCGGGAGGCCCCGTGTGGCCTCCAGATGCGGCATGCCAGGCTTCGGGTACCGAGCGGGAGCCACCTGTGGATCTTCTGCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS GCA 90 bp | CAGAAGATCCACAGGTGGCTCCCGCTCGGTACCCGAAGCCTGGCATaGCGCATCTGGAGGCCACACGGGGCCTCCCGAAACCCACGTTGC | + |
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Preference number: 5 (lower is better) Translates to: QKIHRWLPLGTRSLA*RIWRPHGASRNPRC Trigger: GCAACGTGGGTTTCGGGAGGCCCCGTGTGGCCTCCAGATGCGGCATGCCAGGCTTCGGGTACCGAGCGGGAGCCACCTGTGGATCTTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CCA 90 bp | TCCAGCGCCTCCTGGAGACTGCAGAGCTCGGCCTCTAGTCTGCCGTaGTCCCCGGACACACAGTCCAGCTGTCGCCGCAGGGCACAGATG | + |
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Preference number: 5 (lower is better) Translates to: SSASWRLQSSASSLP*SPDTQSSCRRRAQM Trigger: CATCTGTGCCCTGCGGCGACAGCTGGACTGTGTGTCCGGGGACCACGGCAGACTAGAGGCCGAGCTCTGCAGTCTCCAGGAGGCGCTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CCA 90 bp | CGGTGCCCACCACGTTGCAGCCCCCACTGTTCCTCAGGACACCCGTaGTCCCGGTGCAGTATTCGGTCCTCAGCATGGGCGTGCCCATCA | + |
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Preference number: 5 (lower is better) Translates to: RCPPRCSPHCSSGHP*SRCSIRSSAWACPS Trigger: TGATGGGCACGCCCATGCTGAGGACCGAATACTGCACCGGGACCACGGGTGTCCTGAGGAACAGTGGGGGCTGCAACGTGGTGGGCACCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS GCA 90 bp | CCACGTTGCAGCCCCCACTGTTCCTCAGGACACCCGTGGTCCCGGTaGAGTATTCGGTCCTCAGCATGGGCGTGCCCATCACACAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: PRCSPHCSSGHPWSR*SIRSSAWACPSHRA Trigger: AGCCCTGTGTGATGGGCACGCCCATGCTGAGGACCGAATACTGCACCGGGACCACGGGTGTCCTGAGGAACAGTGGGGGCTGCAACGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS GCA 90 bp | GGACACCCGTGGTCCCGGTGCAGTATTCGGTCCTCAGCATGGGCGTaGCCATCACACAGGGCTCGTAGAGTACGGCACCTTTGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GHPWSRCSIRSSAWA*PSHRARRVRHLWSC Trigger: GCAGCTCCAAAGGTGCCGTACTCTACGAGCCCTGTGTGATGGGCACGCCCATGCTGAGGACCGAATACTGCACCGGGACCACGGGTGTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS TCA 90 bp | GCTCTGCCTGGGCAATGGCCCCCTCGAGCTTGCATCGCTGGCCTTTaGCTGCCTCAATGTCCTGCTGCAGCCGCTGGATTAGCTTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ALPGQWPPRACIAGL*LPQCPAAAAGLACS Trigger: TGAACAAGCTAATCCAGCGGCTGCAGCAGGACATTGAGGCAGTCAAAGGCCAGCGATGCAAGCTCGAGGGGGCCATTGCCCAGGCAGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS TCA 90 bp | CGCCTTGCTCACTTCATAGTGGGTGACCATCCGGGGCATGATGGCTaGGCACGAGCTGAAACTCCGGTTGCCACATCTGGGGCTCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: RLAHFIVGDHPGHDG*ARAETPVATSGAQL Trigger: CAGTTGAGCCCCAGATGTGGCAACCGGAGTTTCAGCTCGTGCTCAGCCATCATGCCCCGGATGGTCACCCACTATGAAGTGAGCAAGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CAA 90 bp | ACTCTGTGTCCAGCTTGGGGTCTGCATCTAGATATGCGAAGGGTGGCTTTGAAGCCGGTGCCCACCACGTaGCAGCCCCCACTGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLCPAWGLHLDMRRVALKPVPTT*QPPLFL Trigger: GAGGAACAGTGGGGGCTGCAACGTGGTGGGCACCGG...CTTCAAAGCCACCCTTCGCATATCTAGATGCAGACCCCAAGCTGGACACAGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS GCA 90 bp | GCCCCCTCGAGCTTGCATCGCTGGCCTTTGACTGCCTCAATGTCCTaGTGCAGCCGCTGGATTAGCTTGTTCATTTCCAGGATCTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: APSSLHRWPLTASMS*CSRWISLFISRISF Trigger: AAATGAGATCCTGGAAATGAACAAGCTAATCCAGCGGCTGCAGCAGGACATTGAGGCAGTCAAAGGCCAGCGATGCAAGCTCGAGGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CAA 90 bp | AGGGAAAGGAGATGGGGTAGAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAATCCAGCCCTGCCAGCTaGCACTTGGCATCAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RERRWGRKDKGWLCEESESSPAS*HLASVR Trigger: CCTCACTGATGCCAAGTGCAAGCTGGCAGGGCTGGA...TTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTCTACCCCATCTCCTTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS GCA 90 bp | CCCTCGAGCTTGCATCGCTGGCCTTTGACTGCCTCAATGTCCTGCTaGAGCCGCTGGATTAGCTTGTTCATTTCCAGGATCTCATTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSSLHRWPLTASMSC*SRWISLFISRISFL Trigger: CAAAAATGAGATCCTGGAAATGAACAAGCTAATCCAGCGGCTGCAGCAGGACATTGAGGCAGTCAAAGGCCAGCGATGCAAGCTCGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CCA 90 bp | ACAGGGCTTTCAGGAACTCAATCTCATGTTCTAGAGCCTCCAAGTTaGTTTCCAGGTCAGCCTTCACCAGGAAGGCTGTGTCCACGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TGLSGTQSHVLEPPS*FPGQPSPGRLCPRP Trigger: AGGACGTGGACACAGCCTTCCTGGTGAAGGCTGACCTGGAAACCAACTTGGAGGCTCTAGAACATGAGATTGAGTTCCTGAAAGCCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CAA 90 bp | AGAACAGTTGTGTGTACAGCTGGCCACCCCTCCTGGGAGAGAAGTGGTGGTAAGAGCCGCTGGATTAGCTaGTTCATTTCCAGGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTVVCTAGHPSWERSGGKSRWIS*FISRIS Trigger: TGAGATCCTGGAAATGAACAAGCTAATCCAGCGGCT...CTTACCACCACTTCTCTCCCAGGAGGGGTGGCCAGCTGTACACACAACTGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS GCA 90 bp | GCCGCTGGATTAGCTTGTTCATTTCCAGGATCTCATTTTTGCGGTTaGGTAGGTTGTCACAGTGGTTCCCAGCCGTTAACCTCAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AAGLACSFPGSHFCG*VGCHSGSQPLTSAP Trigger: AGGAGCTGAGGTTAACGGCTGGGAACCACTGTGACAACCTACGCAACCGCAAAAATGAGATCCTGGAAATGAACAAGCTAATCCAGCGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CCA 90 bp | TTGCATCGCTGGCCTTTGACTGCCTCAATGTCCTGCTGCAGCCGCTaGATTAGCTTGTTCATTTCCAGGATCTCATTTTTGCGGTTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LHRWPLTASMSCCSR*ISLFISRISFLRLR Trigger: ACGCAACCGCAAAAATGAGATCCTGGAAATGAACAAGCTAATCCAGCGGCTGCAGCAGGACATTGAGGCAGTCAAAGGCCAGCGATGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CAA 90 bp | GTTTTGGAATATTCTGGTCTTCAGCCCCATAGAGATGTGGTATTCAGCAATTTCCTCCCGAAACCCACGTaGCACAGGCTCCGAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLEYSGLQPHRDVVFSNFLPKPT*HRLREP Trigger: TGGCTCTCGGAGCCTGTGCAACGTGGGTTTCGGGAG...GAAATTGCTGAATACCACATCTCTATGGGGCTGAAGACCAGAATATTCCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CAA 90 bp | TTTTGGAATATTCTGGTCTTCAGCCCCATAGAGATGTGGTATTCAGCAATTTCAGCCTCTGCTTCTGCTTaGCTGCGGCTGGCGATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FWNILVFSPIEMWYSAISASASA*LRLAMS Trigger: CGACATCGCCAGCCGCAGCAAAGCAGAAGCAGAGGC...TGAAATTGCTGAATACCACATCTCTATGGGGCTGAAGACCAGAATATTCCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CAA 90 bp | AAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCTTTTGCAAAACAGAACAGTACCAGCAGACTCTCATaGATGGTGACAGGGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: KGWLCEESEMEPFAKQNSTSRLS*MVTGVM Trigger: CATCACCCCTGTCACCATCAATGAGAGTCTGCTGGT...ACTGTTCTGTTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS GCA 90 bp | ACCTTGTTGATGAAGGATGCGAATCGGTTATTCAGGCACTTAATCTaGTCCTTTTCATCTCTCTTCACCCTTTGCACGGTCGGGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: TLLMKDANRLFRHLI*SFSSLFTLCTVGSI Trigger: GATTGACCCGACCGTGCAAAGGGTGAAGAGAGATGAAAAGGAGCAGATTAAGTGCCTGAATAACCGATTCGCATCCTTCATCAACAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CAA 90 bp | GAAAGGAGATGGGGTAGAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGTGCATGAAGTTCCACTaGGTCTCCAGAAGCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ERRWGRKDKGWLCEESEMCMKFH*VSRSLF Trigger: AAACAAGCTTCTGGAGACCAAGTGGAACTTCATGCA...CATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTCTACCCCATCTCCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CAA 90 bp | TTTTGGAATATTCTGGTCTTCAGCCCCATAGAGATGTGGTATTCAGCAATTTCATTGCGGTTGCGTAGGTaGTCACAGTGGTTCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FWNILVFSPIEMWYSAISLRLRR*SQWFPA Trigger: GGCTGGGAACCACTGTGACAACCTACGCAACCGCAA...TGAAATTGCTGAATACCACATCTCTATGGGGCTGAAGACCAGAATATTCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CAA 90 bp | AAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCTTTTGCAAAACAGTCCAGGATCTCATTTTaGCGGTTGCGTAGGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KDKGWLCEESEMEPFAKQSRISF*RLRRLS Trigger: TGACAACCTACGCAACCGCAAAAATGAGATCCTGGA...CTGTTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CAA 90 bp | AGAAAGGACAAGGGCTGGCTTTGTGAGGAAAGTGAAATGGAGCCTTTTGCAAAAATCTCATTTTTGCGGTaGCGTAGGTTGTCACAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RKDKGWLCEESEMEPFAKISFLR*RRLSQW Trigger: CCACTGTGACAACCTACGCAACCGCAAAAATGAGAT...TTTTGCAAAAGGCTCCATTTCACTTTCCTCACAAAGCCAGCCCTTGTCCTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS-3UTR CAA 90 bp | TTTTGGAATATTCTGGTCTTCAGCCCCATAGAGATGTGGTATTCAGCAATTTCAAGGAACCGCACCTTGTaGATGAAGGATGCGAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: FWNILVFSPIEMWYSAISRNRTL*MKDANR Trigger: CCGATTCGCATCCTTCATCAACAAGGTGCGGTTCCT...TGAAATTGCTGAATACCACATCTCTATGGGGCTGAAGACCAGAATATTCCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CAA 90 bp | GGCATGCCGCATCTGGAGGCCACACGGGGCCTCCCGAAACCCACGTaGCACAGGCTCCGAGAGCCAAGGCAACCCAGGGCTCGGAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GMPHLEATRGLPKPT*HRLREPRQPRARRP Trigger: GGGCCTCCGAGCCCTGGGTTGCCTTGGCTCTCGGAGCCTGTGCAACGTGGGTTTCGGGAGGCCCCGTGTGGCCTCCAGATGCGGCATGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS GCA 72 bp | CACAGGTGGCTCCCGCTCGGTACCCGAAGCCTGGCATaGCGCATCTGGAGGCCACACGGGGCCTCCCGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: HRWLPLGTRSLA*RIWRPHGASRN Trigger: GTTTCGGGAGGCCCCGTGTGGCCTCCAGATGCGGCATGCCAGGCTTCGGGTACCGAGCGGGAGCCACCTGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CCA 72 bp | CTCCCGCTCGGTACCCGAAGCCTGGCATGCCGCATCTaGAGGCCACACGGGGCCTCCCGAAACCCACGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPLGTRSLACRI*RPHGASRNPRC Trigger: GCAACGTGGGTTTCGGGAGGCCCCGTGTGGCCTCCAGATGCGGCATGCCAGGCTTCGGGTACCGAGCGGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CCA 72 bp | AGATCCACAGGTGGCTCCCGCTCGGTACCCGAAGCCTaGCATGCCGCATCTGGAGGCCACACGGGGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RSTGGSRSVPEA*HAASGGHTGPP Trigger: GGGAGGCCCCGTGTGGCCTCCAGATGCGGCATGCCAGGCTTCGGGTACCGAGCGGGAGCCACCTGTGGATCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS GCA 72 bp | ATCTGGAGGCCACACGGGGCCTCCCGAAACCCACGTTaGACAGGCTCCGAGAGCCAAGGCAACCCAGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: IWRPHGASRNPR*TGSESQGNPGL Trigger: GAGCCCTGGGTTGCCTTGGCTCTCGGAGCCTGTGCAACGTGGGTTTCGGGAGGCCCCGTGTGGCCTCCAGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CCA 72 bp | TCCTGGAGACTGCAGAGCTCGGCCTCTAGTCTGCCGTaGTCCCCGGACACACAGTCCAGCTGTCGCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SWRLQSSASSLP*SPDTQSSCRRR Trigger: CCTGCGGCGACAGCTGGACTGTGTGTCCGGGGACCACGGCAGACTAGAGGCCGAGCTCTGCAGTCTCCAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CAA 72 bp | CATCTGGAGGCCACACGGGGCCTCCCGAAACCCACGTaGCACAGGCTCCGAGAGCCAAGGCAACCCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: HLEATRGLPKPT*HRLREPRQPRA Trigger: AGCCCTGGGTTGCCTTGGCTCTCGGAGCCTGTGCAACGTGGGTTTCGGGAGGCCCCGTGTGGCCTCCAGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS GCA 72 bp | CGCAGGGGATGTAGAGTTCACCGGTGCCCACCACGTTaGAGCCCCCACTGTTCCTCAGGACACCCGTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRGCRVHRCPPR*SPHCSSGHPWS Trigger: GGACCACGGGTGTCCTGAGGAACAGTGGGGGCTGCAACGTGGTGGGCACCGGTGAACTCTACATCCCCTGCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CCA 72 bp | CCACGTTGCAGCCCCCACTGTTCCTCAGGACACCCGTaGTCCCGGTGCAGTATTCGGTCCTCAGCATGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PRCSPHCSSGHP*SRCSIRSSAWA Trigger: CGCCCATGCTGAGGACCGAATACTGCACCGGGACCACGGGTGTCCTGAGGAACAGTGGGGGCTGCAACGTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS GCA 72 bp | TTGCACTTGGCATCAGTGAGGGCGGCCTCTCCCTGCTaGTCTGCCTGGGCAATGGCCCCCTCGAGCTTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LHLASVRAASPC*SAWAMAPSSLH Trigger: ATGCAAGCTCGAGGGGGCCATTGCCCAGGCAGAGCAGCAGGGAGAGGCCGCCCTCACTGATGCCAAGTGCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS GCA 72 bp | AGCCCCCACTGTTCCTCAGGACACCCGTGGTCCCGGTaGAGTATTCGGTCCTCAGCATGGGCGTGCCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SPHCSSGHPWSR*SIRSSAWACPS Trigger: TGATGGGCACGCCCATGCTGAGGACCGAATACTGCACCGGGACCACGGGTGTCCTGAGGAACAGTGGGGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS GCA 72 bp | AGCGGCTGCACGAATTGCTACCCACCCCCACCTTCATaGTGGAGCTCCGCCCATTTCCACAGCCCAGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGCTNCYPPPPS*WSSAHFHSPGA Trigger: GGCTCCTGGGCTGTGGAAATGGGCGGAGCTCCAGCATGAAGGTGGGGGTGGGTAGCAATTCGTGCAGCCGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CCA 72 bp | GGCTGCACGAATTGCTACCCACCCCCACCTTCATGCTaGAGCTCCGCCCATTTCCACAGCCCAGGAGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GCTNCYPPPPSC*SSAHFHSPGAL Trigger: AAGGGCTCCTGGGCTGTGGAAATGGGCGGAGCTCCAGCATGAAGGTGGGGGTGGGTAGCAATTCGTGCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CAA 72 bp | TGGGCAATGGCCCCCTCGAGCTTGCATCGCTGGCCTTaGACTGCCTCAATGTCCTGCTGCAGCCGCTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: WAMAPSSLHRWP*TASMSCCSRWI Trigger: AATCCAGCGGCTGCAGCAGGACATTGAGGCAGTCAAAGGCCAGCGATGCAAGCTCGAGGGGGCCATTGCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CAA 90 bp | TGCTCTGCCTGGGCAATGGCCCCCTCGAGCTTGCATCGCTGGCCTTaGACTGCCTCAATGTCCTGCTGCAGCCGCTGGATTAGCTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CSAWAMAPSSLHRWP*TASMSCCSRWISLF Trigger: GAACAAGCTAATCCAGCGGCTGCAGCAGGACATTGAGGCAGTCAAAGGCCAGCGATGCAAGCTCGAGGGGGCCATTGCCCAGGCAGAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS TCA 72 bp | CACTTCATAGTGGGTGACCATCCGGGGCATGATGGCTaGGCACGAGCTGAAACTCCGGTTGCCACATCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: HFIVGDHPGHDG*ARAETPVATSG Trigger: CCCAGATGTGGCAACCGGAGTTTCAGCTCGTGCTCAGCCATCATGCCCCGGATGGTCACCCACTATGAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CAA 72 bp | CGGGGCATGATGGCTGAGCACGAGCTGAAACTCCGGTaGCCACATCTGGGGCTCAACTGGAAATTTCGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RGMMAEHELKLR*PHLGLNWKFRH Trigger: ATGCCGAAATTTCCAGTTGAGCCCCAGATGTGGCAACCGGAGTTTCAGCTCGTGCTCAGCCATCATGCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS GCA 72 bp | TTGCATCGCTGGCCTTTGACTGCCTCAATGTCCTGCTaGAGCCGCTGGATTAGCTTGTTCATTTCCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: LHRWPLTASMSC*SRWISLFISRI Trigger: GATCCTGGAAATGAACAAGCTAATCCAGCGGCTGCAGCAGGACATTGAGGCAGTCAAAGGCCAGCGATGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CAA 90 bp | AACAGGGCTTTCAGGAACTCAATCTCATGTTCTAGAGCCTCCAAGTaGGTTTCCAGGTCAGCCTTCACCAGGAAGGCTGTGTCCACGTCC | + |
|
Preference number: 6 (lower is better) Translates to: NRAFRNSISCSRASK*VSRSAFTRKAVSTS Trigger: GGACGTGGACACAGCCTTCCTGGTGAAGGCTGACCTGGAAACCAACTTGGAGGCTCTAGAACATGAGATTGAGTTCCTGAAAGCCCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CAA 90 bp | AGCCGCTGGATTAGCTTGTTCATTTCCAGGATCTCATTTTTGCGGTaGCGTAGGTTGTCACAGTGGTTCCCAGCCGTTAACCTCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRWISLFISRISFLR*RRLSQWFPAVNLSS Trigger: GGAGCTGAGGTTAACGGCTGGGAACCACTGTGACAACCTACGCAACCGCAAAAATGAGATCCTGGAAATGAACAAGCTAATCCAGCGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CAA 90 bp | TGGCCTTTGACTGCCTCAATGTCCTGCTGCAGCCGCTGGATTAGCTaGTTCATTTCCAGGATCTCATTTTTGCGGTTGCGTAGGTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: WPLTASMSCCSRWIS*FISRISFLRLRRLS Trigger: TGACAACCTACGCAACCGCAAAAATGAGATCCTGGAAATGAACAAGCTAATCCAGCGGCTGCAGCAGGACATTGAGGCAGTCAAAGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CCA 72 bp | TCAGGAACTCAATCTCATGTTCTAGAGCCTCCAAGTTaGTTTCCAGGTCAGCCTTCACCAGGAAGGCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SGTQSHVLEPPS*FPGQPSPGRLC Trigger: ACACAGCCTTCCTGGTGAAGGCTGACCTGGAAACCAACTTGGAGGCTCTAGAACATGAGATTGAGTTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CAA 72 bp | TTCAGGAACTCAATCTCATGTTCTAGAGCCTCCAAGTaGGTTTCCAGGTCAGCCTTCACCAGGAAGGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FRNSISCSRASK*VSRSAFTRKAV Trigger: CACAGCCTTCCTGGTGAAGGCTGACCTGGAAACCAACTTGGAGGCTCTAGAACATGAGATTGAGTTCCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CAA 72 bp | TTCATTTCCAGGATCTCATTTTTGCGGTTGCGTAGGTaGTCACAGTGGTTCCCAGCCGTTAACCTCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FISRISFLRLRR*SQWFPAVNLSS Trigger: GGAGCTGAGGTTAACGGCTGGGAACCACTGTGACAACCTACGCAACCGCAAAAATGAGATCCTGGAAATGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CCA 72 bp | TGGCCTTTGACTGCCTCAATGTCCTGCTGCAGCCGCTaGATTAGCTTGTTCATTTCCAGGATCTCATTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: WPLTASMSCCSR*ISLFISRISFL Trigger: CAAAAATGAGATCCTGGAAATGAACAAGCTAATCCAGCGGCTGCAGCAGGACATTGAGGCAGTCAAAGGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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| CDS CAA 72 bp | ATTAGCTTGTTCATTTCCAGGATCTCATTTTTGCGGTaGCGTAGGTTGTCACAGTGGTTCCCAGCCGTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: ISLFISRISFLR*RRLSQWFPAVN Trigger: GTTAACGGCTGGGAACCACTGTGACAACCTACGCAACCGCAAAAATGAGATCCTGGAAATGAACAAGCTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023713.10 |
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