Pregenerated sensors for KRT79 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061397Ensembl transcript IDs: ENSMUST00000023799.8
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCCAAATCAACCAGCTGGTGACCCTAACTTCCCTCCCATTCCACTaGATAACCAAGGAGAAAAACCTGAGTAGATTTGAGCCCTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: PQINQLVTLTSLPFH*ITKEKNLSRFEPFP Trigger: GGGAAAGGGCTCAAATCTACTCAGGTTTTTCTCCTTGGTTATGCAGTGGAATGGGAGGGAAGTTAGGGTCACCAGCTGGTTGATTTGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| 3UTR GCA 72 bp | CAGGGACTTGACCGTGAGGTGACAAGGATAAGGAGCTaGAGGTCTCTGGCAACCCCTTCTGCCTCCTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: QGLDREVTRIRS*RSLATPSASSS Trigger: GCTGGAGGAGGCAGAAGGGGTTGCCAGAGACCTGCAGCTCCTTATCCTTGTCACCTCACGGTCAAGTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| 3UTR TCA 72 bp | CTCCAGCTTGCCCTGAACTCAGCAGATCTGCTGAGGTaGAAACGTAGAACTGGACATCCTACCCCCTCTAAA | + |
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Preference number: 3 (lower is better) Translates to: LQLALNSADLLR*KRRTGHPTPSK Trigger: TTTAGAGGGGGTAGGATGTCCAGTTCTACGTTTTCACCTCAGCAGATCTGCTGAGTTCAGGGCAAGCTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| 3UTR GCA 72 bp | AACCAGCTGGTGACCCTAACTTCCCTCCCATTCCACTaGATAACCAAGGAGAAAAACCTGAGTAGATTTGAG | + |
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Preference number: 3 (lower is better) Translates to: NQLVTLTSLPFH*ITKEKNLSRFE Trigger: CTCAAATCTACTCAGGTTTTTCTCCTTGGTTATGCAGTGGAATGGGAGGGAAGTTAGGGTCACCAGCTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CCA 90 bp | TTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTGAGAAGCCACAAAGCCGCCCTTGCTaGCCCCGCCAGCCCCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LYVNCALQILSLCGPEKPQSRPC*PRQPRP Trigger: TGGGCGGGGCTGGCGGGGCCAGCAAGGGCGGCTTTG...TGGCTTCTCAGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR GCA 90 bp | TGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTGAGTGTAGAGGCTCCGGCTaGCAAAGCCCCCGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: CKLYVNCALQILSLCGPECRGSG*QSPRSW Trigger: CCAGCTCCGGGGGCTTTGGCAGCCGGAGCCTCTACA...CTCAGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR TCA 90 bp | TTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTGAGAAGCCAACCACCTCCGCTGGCTaGGTTAGAGCTGAAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LYVNCALQILSLCGPEKPTTSAG*VRAEAS Trigger: GGAGGCTTCAGCTCTAACTCAGCCAGCGGAGGTGGT...TGGCTTCTCAGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR GCA 90 bp | TTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTGAGAAGCCATTCTGGCTCTGCTCCTaGAGCAGCGCCCACTTCGTC | + |
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Preference number: 4 (lower is better) Translates to: LYVNCALQILSLCGPEKPFWLCS*SSAHFV Trigger: GACGAAGTGGGCGCTGCTGCAGGAGCAGAGCCAGAA...TGGCTTCTCAGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CCA 90 bp | TTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTGAGAAGCCACCCGCTCGCTCTGTTTaGTATCCAGCTGCCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LYVNCALQILSLCGPEKPPARSV*YPAASS Trigger: TGAGGAGGCAGCTGGATACCAAACAGAGCGAGCGGG...TGGCTTCTCAGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CCA 90 bp | TGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTGAGGCTCTGCTTCTGCGATaGCTGTCTGCAGCTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: CKLYVNCALQILSLCGPEALLLR*LSAAAG Trigger: GCCAGCAGCTGCAGACAGCCATCGCAGAAGCAGAGC...CTCAGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR GCA 90 bp | CAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCCCACATAGGCCCCACTaGCAAAGCCTCCTAGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: QMQIICKLCTTNTQPLRSPHRPH*QSLLVP Trigger: GGGCACTAGGAGGCTTTGGCAGTGGGGCCTATGTGG...GGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CCA 90 bp | TTTCCCAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGCGACCCCCGTGTTCTaGCTCTGCTCCTGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FPKCKLYVNCALQILSLCATPVF*LCSCSS Trigger: GCTGCTGCAGGAGCAGAGCCAGAACACGGGGGTCGC...GCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTGGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR TCA 90 bp | TGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTGAGGGTCTATCTCCACATTaGGAGGCGTCAGCAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: CKLYVNCALQILSLCGPEGLSPH*EASAGS Trigger: AGAGCCTGCTGACGCCTCTCAATGTGGAGATAGACC...CTCAGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR GCA 90 bp | TGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTGAGCTCCCCATTCTGCTCTaGTTCTGCGATGGCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: CKLYVNCALQILSLCGPELPILL*FCDGCL Trigger: CAGACAGCCATCGCAGAAGCAGAGCAGAATGGGGAG...CTCAGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CCA 90 bp | CAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCGCTGTCTGCAGCTGCTaGCACTGCTTCTTGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QMQIICKLCTTNTQPLRSAVCSC*HCFLAA Trigger: TGCAGCCAAGAAGCAGTGCCAGCAGCTGCAGACAGC...GGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR GCA 90 bp | TTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTGAGAAGCCATCAGACACATTGGTCTaGACTTGGCTCAGCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: LYVNCALQILSLCGPEKPSDTLV*TWLSSI Trigger: GATGGAGCTGAGCCAAGTGCAGACCAATGTGTCTGA...TGGCTTCTCAGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR GCA 90 bp | TTTCCCAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGCACTGCTTCTTGGCTaGATCCACCTCGCCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: FPKCKLYVNCALQILSLCALLLG*IHLALQ Trigger: CTGCAGGGCGAGGTGGATGCAGCCAAGAAGCAGTGC...GCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTGGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR GCA 90 bp | TTTCCCAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCTGCAGCTGCTGGCACTaGTTCTTGGCTGCATCCACC | + |
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Preference number: 4 (lower is better) Translates to: FPKCKLYVNCALQILSLCCSCWH*FLAAST Trigger: GGTGGATGCAGCCAAGAAGCAGTGCCAGCAGCTGCA...GCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTGGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR GCA 90 bp | AAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTATGGCTGTCTGCAGCTaGTGGCACTGCTTCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: KCKLYVNCALQILSLCGPMAVCS*WHCFLA Trigger: AGCCAAGAAGCAGTGCCAGCAGCTGCAGACAGCCAT...AGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR GCA 90 bp | TTTCCCAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCTCTGCGATGGCTGTCTaGAGCTGCTGGCACTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: FPKCKLYVNCALQILSLCSAMAV*SCWHCF Trigger: GAAGCAGTGCCAGCAGCTGCAGACAGCCATCGCAGA...GCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTGGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CCA 90 bp | AAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTTCAGCCCGACTCTTCTaGGCGATCAGCTCATACTGG | + |
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Preference number: 4 (lower is better) Translates to: KCKLYVNCALQILSLCGPSARLF*AISSYW Trigger: CCAGTATGAGCTGATCGCCCAGAAGAGTCGGGCTGA...AGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CCA 90 bp | AAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTTGGTCTTCCGTAGGATaGAGGTTCCCCCAGAGACCT | + |
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Preference number: 4 (lower is better) Translates to: KCKLYVNCALQILSLCGPWSSVG*RFPQRP Trigger: AGGTCTCTGGGGGAACCTCCATCCTACGGAAGACCA...AGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR TCA 90 bp | AAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTCCTGGACATAGTCACTaGGCTGTAGCTGGTTCGCAT | + |
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Preference number: 4 (lower is better) Translates to: KCKLYVNCALQILSLCGPPGHSH*AVAGSH Trigger: ATGCGAACCAGCTACAGCTCAGTGACTATGTCCAGG...AGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR GCA 90 bp | AAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTATTCTGCTCTGCTTCTaGGATGGCTGTCTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KCKLYVNCALQILSLCGPILLCF*DGCLQL Trigger: CAGCTGCAGACAGCCATCGCAGAAGCAGAGCAGAAT...AGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CCA 90 bp | TGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTGAGACATTGGTCTGCACTTaGCTCAGCTCCATCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: CKLYVNCALQILSLCGPETLVCT*LSSISK Trigger: CTTTGAGATGGAGCTGAGCCAAGTGCAGACCAATGT...CTCAGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CCA 90 bp | CAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCGCGATCAGCTCATACTaGGCTTTGACTTCAGCGATG | + |
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Preference number: 4 (lower is better) Translates to: QMQIICKLCTTNTQPLRSAISSY*ALTSAM Trigger: CATCGCTGAAGTCAAAGCCCAGTATGAGCTGATCGC...GGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR TCA 90 bp | CAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTCTGAGTGGTGCGAGTaGGTTCTGCGATCTCATTTT | + |
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Preference number: 4 (lower is better) Translates to: QMQIICKLCTTNTQPLRSSEWCE*VLRSHF Trigger: AAAATGAGATCGCAGAACTCACTCGCACCACTCAGA...GGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR GCA 90 bp | CAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTTCCCAGCTGTCACCTaGAGTTCTTCATATTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: QMQIICKLCTTNTQPLRSFPAVT*SSSYLV Trigger: GACCAAATATGAAGAACTGCAGGTGACAGCTGGGAA...GGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CCA 90 bp | TTTCCCAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCTGGTGTCAGACACATTaGTCTGCACTTGGCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FPKCKLYVNCALQILSLCWCQTH*SALGSA Trigger: AGCTGAGCCAAGTGCAGACCAATGTGTCTGACACCA...GCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTGGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR GCA 90 bp | TTTCCCAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCCATGCAGATCCATTCTaGCCATGTATGCGGCATCTA | + |
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Preference number: 4 (lower is better) Translates to: FPKCKLYVNCALQILSLCHADPF*PCMRHL Trigger: TAGATGCCGCATACATGGGCAGAATGGATCTGCATG...GCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTGGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR GCA 90 bp | TTTCCCAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTGCGAGTGAGTTCTaGGATCTCATTTTTAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: FPKCKLYVNCALQILSLCGASEF*DLIFSV Trigger: GACACTAAAAATGAGATCGCAGAACTCACTCGCACC...GCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTGGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CCA 90 bp | TTTCCCAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGCAGTTCTTCATATTTaGTCTGGTACCAGGACTCAG | + |
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Preference number: 4 (lower is better) Translates to: FPKCKLYVNCALQILSLCAVLHI*SGTRTQ Trigger: CTGAGTCCTGGTACCAGACCAAATATGAAGAACTGC...GCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTGGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS GCA 90 bp | GCCTGCGCAAACGGAGGTAGAGTTGCCGGTCACCGAGATGCTGATTaGGCTGGGACAATCTCCAGACATCCTGCTCTCCTCGCTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: ACANGGRVAGHRDAD*AGTISRHPALLALQ Trigger: CTGGAGAGCGAGGAGAGCAGGATGTCTGGAGATTGTCCCAGCGCAATCAGCATCTCGGTGACCGGCAACTCTACCTCCGTTTGCGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CAA 90 bp | CAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCGAACCAAAGCCGCCCTaGCTGGCCCCGCCAGCCCCG | + |
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Preference number: 5 (lower is better) Translates to: QMQIICKLCTTNTQPLRSEPKPP*LAPPAP Trigger: CGGGGCTGGCGGGGCCAGCAAGGGCGGCTTTGGTTC...GGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CAA 90 bp | TGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTGAGTGCTGGCACTGCTTCTaGGCTGCATCCACCTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: CKLYVNCALQILSLCGPECWHCF*AASTSP Trigger: GGGCGAGGTGGATGCAGCCAAGAAGCAGTGCCAGCA...CTCAGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CAA 90 bp | CAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCCACATTGGTCTGCACTaGGCTCAGCTCCATCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: QMQIICKLCTTNTQPLRSHIGLH*AQLHLK Trigger: TTTGAGATGGAGCTGAGCCAAGTGCAGACCAATGTG...GGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CAA 90 bp | TTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTGAGAAGCCATGCAGTTCTTCATATTaGGTCTGGTACCAGGACTCA | + |
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Preference number: 5 (lower is better) Translates to: LYVNCALQILSLCGPEKPCSSSY*VWYQDS Trigger: TGAGTCCTGGTACCAGACCAAATATGAAGAACTGCA...TGGCTTCTCAGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CAA 90 bp | TTTCCCAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCCTCCGGCTAGAGGTCTaGACTGTAGTGGTCTTCCGT | + |
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Preference number: 5 (lower is better) Translates to: FPKCKLYVNCALQILSLCLRLEV*TVVVFR Trigger: ACGGAAGACCACTACAGTCAAGACCTCTAGCCGGAG...GCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTGGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CAA 90 bp | TTTCCCAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGTCAAGCTGTCCACTTaGCCATGCAGATCCATTCTG | + |
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Preference number: 5 (lower is better) Translates to: FPKCKLYVNCALQILSLCVKLST*PCRSIL Trigger: CAGAATGGATCTGCATGGCAAAGTGGACAGCTTGAC...GCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTGGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CAA 90 bp | AAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGGTCCTCATCTCAAAGAGCTGTaGCAGGAAGTCAATCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: KCKLYVNCALQILSLCGPHLKEL*QEVNLL Trigger: CAAGAGATTGACTTCCTGCAACAGCTCTTTGAGATG...AGGACCGCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS-3UTR CAA 90 bp | TTTCCCAAATGCAAATTATATGTAAATTGTGCACTACAAATACTCAGCCTCTGCGCATCTACATCCTTCTaGAGCAGCACAAACTCATTC | + |
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Preference number: 5 (lower is better) Translates to: FPKCKLYVNCALQILSLCASTSF*SSTNSF Trigger: GAATGAGTTTGTGCTGCTCAAGAAGGATGTAGATGC...GCAGAGGCTGAGTATTTGTAGTGCACAATTTACATATAATTTGCATTTGGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS CCA 72 bp | CTGCGATGGCTGTCTGCAGCTGCTGGCACTGCTTCTTaGCTGCATCCACCTCGCCCTGCAGTCTCTGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: LRWLSAAAGTAS*LHPPRPAVSEW Trigger: CCACTCAGAGACTGCAGGGCGAGGTGGATGCAGCCAAGAAGCAGTGCCAGCAGCTGCAGACAGCCATCGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS TCA 72 bp | GCTGGTTCGCATCCGACTCCCACCACCTCCGCTGGCTaGGTTAGAGCTGAAGCCTCCTTTAGTGGAGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: AGSHPTPTTSAG*VRAEASFSGES Trigger: ACTTTCTCCACTAAAGGAGGCTTCAGCTCTAACTCAGCCAGCGGAGGTGGTGGGAGTCGGATGCGAACCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS GCA 72 bp | CTCGCCCTGCAGTCTCTGAGTGGTGCGAGTGAGTTCTaGGATCTCATTTTTAGTGTCTCGAAGGCTGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LALQSLSGASEF*DLIFSVSKAVP Trigger: GGGGACAGCCTTCGAGACACTAAAAATGAGATCGCAGAACTCACTCGCACCACTCAGAGACTGCAGGGCGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS CAA 72 bp | GGTCTGCACTTGGCTCAGCTCCATCTCAAAGAGCTGTaGCAGGAAGTCAATCTCTTGTGTCAAGCTGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: GLHLAQLHLKEL*QEVNLLCQAVH Trigger: GTGGACAGCTTGACACAAGAGATTGACTTCCTGCAACAGCTCTTTGAGATGGAGCTGAGCCAAGTGCAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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| CDS GCA 72 bp | GTCTGCACTTGGCTCAGCTCCATCTCAAAGAGCTGTTaGAGGAAGTCAATCTCTTGTGTCAAGCTGTCCACT | + |
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Preference number: 6 (lower is better) Translates to: VCTWLSSISKSC*RKSISCVKLST Trigger: AGTGGACAGCTTGACACAAGAGATTGACTTCCTGCAACAGCTCTTTGAGATGGAGCTGAGCCAAGTGCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023799.8 |
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