Pregenerated sensors for KRT77 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067594Ensembl transcript IDs: ENSMUST00000087996.7
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCAACTCTCATTCCCCAGACCCAGACATTTGCAAGGAGCAGCGCTaGCCCACAGGTGCCCGGCATTTGAGCAGTTCTCAGCAGGGAATG | + |
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Preference number: 1 (lower is better) Translates to: SNSHSPDPDICKEQR*PTGARHLSSSQQGM Trigger: CATTCCCTGCTGAGAACTGCTCAAATGCCGGGCACCTGTGGGGCAGCGCTGCTCCTTGCAAATGTCTGGGTCTGGGGAATGAGAGTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR GCA 90 bp | GGATCAACCCAAGTCAGCAACTCTCATTCCCCAGACCCAGACATTTaGAAGGAGCAGCGCTGCCCCACAGGTGCCCGGCATTTGAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: GSTQVSNSHSPDPDI*KEQRCPTGARHLSS Trigger: ACTGCTCAAATGCCGGGCACCTGTGGGGCAGCGCTGCTCCTTGCAAATGTCTGGGTCTGGGGAATGAGAGTTGCTGACTTGGGTTGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR TCA 90 bp | GTCCCACAGGTACTCAGAACAACAAACCTACCCTTGCTGTCATGGTaGACCAGCATGAGCCTACAGAGCAAAGGGTCCCGAAGGCTGTTG | + |
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Preference number: 1 (lower is better) Translates to: VPQVLRTTNLPLLSW*TSMSLQSKGSRRLL Trigger: CAACAGCCTTCGGGACCCTTTGCTCTGTAGGCTCATGCTGGTTCACCATGACAGCAAGGGTAGGTTTGTTGTTCTGAGTACCTGTGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR CAA 90 bp | CCAGACATTTGCAAGGAGCAGCGCTGCCCCACAGGTGCCCGGCATTaGAGCAGTTCTCAGCAGGGAATGGGCGGCTCTAAATGCAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: PDICKEQRCPTGARH*SSSQQGMGGSKCRG Trigger: CCCCCTGCATTTAGAGCCGCCCATTCCCTGCTGAGAACTGCTCAAATGCCGGGCACCTGTGGGGCAGCGCTGCTCCTTGCAAATGTCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR CAA 90 bp | TGGATCAACCCAAGTCAGCAACTCTCATTCCCCAGACCCAGACATTaGCAAGGAGCAGCGCTGCCCCACAGGTGCCCGGCATTTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: WINPSQQLSFPRPRH*QGAALPHRCPAFEQ Trigger: CTGCTCAAATGCCGGGCACCTGTGGGGCAGCGCTGCTCCTTGCAAATGTCTGGGTCTGGGGAATGAGAGTTGCTGACTTGGGTTGATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR-3UTR TCA 90 bp | AGGCCGCCGCGCGGGGACTTAATATTTACTGAACTGTCCAGTTTAGGAACAGGGTTGGGAAAAGATAGGTaGGGGAGCCCGGGAGGGATT | + |
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Preference number: 2 (lower is better) Translates to: RPPRGDLIFTELSSLGTGLGKDR*GSPGGI Trigger: AATCCCTCCCGGGCTCCCTCACCTATCTTTTCCCAA...CCCTGTTCCTAAACTGGACAGTTCAGTAAATATTAAGTCCCCGCGCGGCGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR-3UTR GCA 90 bp | CGGAACGCGAAGCAAAGGCACATTCCCTCTCGTGACTCTTCATTGGCTGGAACTAGACCAGCAGGGAGGTaGGTATGTGAGCATGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: RNAKQRHIPSRDSSLAGTRPAGR*VCEHVS Trigger: AGACACATGCTCACATACGCACCTCCCTGCTGGTCT...AGTTCCAGCCAATGAAGAGTCACGAGAGGGAATGTGCCTTTGCTTCGCGTTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR-3UTR GCA 90 bp | AAAACAGAACTGCCAAGCCCTTCAGAGTTCAGCTTCCAACCAGGAAATGAGGTCTTACCCAGCAGCCCCTaGAGAGAAGCTCTCCCGGAC | + |
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Preference number: 2 (lower is better) Translates to: KTELPSPSEFSFQPGNEVLPSSP*REALPD Trigger: GTCCGGGAGAGCTTCTCTGCAGGGGCTGCTGGGTAA...GACCTCATTTCCTGGTTGGAAGCTGAACTCTGAAGGGCTTGGCAGTTCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR-3UTR GCA 90 bp | CAGAACTGCCAAGCCCTTCAGAGTTCAGCTTCCAACCAGGAAATGAGGTCACAAGAACTTTCCTCTTCCTaGCCCCTCAGCACAGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: QNCQALQSSASNQEMRSQELSSS*PLSTAQ Trigger: TTGAGCTGTGCTGAGGGGGCAGGAAGAGGAAAGTTC...TTGTGACCTCATTTCCTGGTTGGAAGCTGAACTCTGAAGGGCTTGGCAGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCAGCCCCTGCAGAGAAGCTCTCCCGGACAGAATTATCAACTCAGCGGTTCTTTTTCTTAGTTGCTaGGCAAAGCCCATGAGGATT | + |
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Preference number: 2 (lower is better) Translates to: PSSPCREALPDRIINSAVLFLSC*AKPMRI Trigger: AATCCTCATGGGCTTTGCCCAGCAACTAAGAAAAAG...AACCGCTGAGTTGATAATTCTGTCCGGGAGAGCTTCTCTGCAGGGGCTGCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR-3UTR TCA 90 bp | CAGAAACAGAACTTGATTAACCACCCTATCCTATCCACACCCACTGCTAAGGACCCCTTGCTGTCATGGTaGACCAGCATGAGCCTACAG | + |
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Preference number: 2 (lower is better) Translates to: QKQNLINHPILSTPTAKDPLLSW*TSMSLQ Trigger: CTGTAGGCTCATGCTGGTTCACCATGACAGCAAGGG...GTCCTTAGCAGTGGGTGTGGATAGGATAGGGTGGTTAATCAAGTTCTGTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR-3UTR TCA 90 bp | AGGCACATTCCCTCTCGTGACTCTTCATTGGCTGGAACTTTCCTCTTCCTGCCCTCAACTGTTAACCAGTaGATGACACAAGTCGGCACA | + |
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Preference number: 2 (lower is better) Translates to: RHIPSRDSSLAGTFLFLPSTVNQ*MTQVGT Trigger: TGTGCCGACTTGTGTCATTCACTGGTTAACAGTTGA...GGGCAGGAAGAGGAAAGTTCCAGCCAATGAAGAGTCACGAGAGGGAATGTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR-3UTR CCA 90 bp | CAGAACTGCCAAGCCCTTCAGAGTTCAGCTTCCAACCAGGAAATGAGGTCACAACTCGTGACTCTTCATTaGCTGGAACTTTCCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: QNCQALQSSASNQEMRSQLVTLH*LELSSS Trigger: GGAAGAGGAAAGTTCCAGCCAATGAAGAGTCACGAG...TTGTGACCTCATTTCCTGGTTGGAAGCTGAACTCTGAAGGGCTTGGCAGTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR-3UTR TCA 90 bp | CGGAACGCGAAGCAAAGGCACATTCCCTCTCGTGACTCTTCATTGGCTGGAACTGACAGAAACAGAACTTaGTTAACCACCCTATCCTAT | + |
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Preference number: 2 (lower is better) Translates to: RNAKQRHIPSRDSSLAGTDRNRT*LTTLSY Trigger: ATAGGATAGGGTGGTTAATCAAGTTCTGTTTCTGTC...AGTTCCAGCCAATGAAGAGTCACGAGAGGGAATGTGCCTTTGCTTCGCGTTCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR-3UTR CCA 90 bp | CACCGAGTTCTTTTTCTTAGTTGCTGGGCAAAGCCCATGAGGATTAGGACAGTGCTTGCTGAGACCCATTaGGAAAAGATAGGTGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: HRVLFLSCWAKPMRIRTVLAETH*EKIGEG Trigger: TCCCTCACCTATCTTTTCCCAATGGGTCTCAGCAAG...CACTGTCCTAATCCTCATGGGCTTTGCCCAGCAACTAAGAAAAAGAACTCGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR-3UTR TCA 90 bp | AGGCTCATAGTGAAGTTTGTTCACCGAGTTCTTTTTCTTAGTTGCTGGGCAAAGAGGGAGGTGCGTATGTaGGCATGTGTCTGTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: RLIVKFVHRVLFLSCWAKREVRM*ACVCLF Trigger: AAAGAGACAGACACATGCTCACATACGCACCTCCCT...CTTTGCCCAGCAACTAAGAAAAAGAACTCGGTGAACAAACTTCACTATGAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR TCA 72 bp | GCAAGGAGCAGCGCTGCCCCACAGGTGCCCGGCATTTaGGCAGTTCTCAGCAGGGAATGGGCGGCTCTAAAT | + |
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Preference number: 3 (lower is better) Translates to: ARSSAAPQVPGI*AVLSREWAALN Trigger: ATTTAGAGCCGCCCATTCCCTGCTGAGAACTGCTCAAATGCCGGGCACCTGTGGGGCAGCGCTGCTCCTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR GCA 72 bp | CCCAGACATTTGCAAGGAGCAGCGCTGCCCCACAGGTaGCCGGCATTTGAGCAGTTCTCAGCAGGGAATGGG | + |
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Preference number: 3 (lower is better) Translates to: PRHLQGAALPHR*PAFEQFSAGNG Trigger: CCCATTCCCTGCTGAGAACTGCTCAAATGCCGGGCACCTGTGGGGCAGCGCTGCTCCTTGCAAATGTCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR GCA 72 bp | CAAGTCAGCAACTCTCATTCCCCAGACCCAGACATTTaGAAGGAGCAGCGCTGCCCCACAGGTGCCCGGCAT | + |
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Preference number: 3 (lower is better) Translates to: QVSNSHSPDPDI*KEQRCPTGARH Trigger: ATGCCGGGCACCTGTGGGGCAGCGCTGCTCCTTGCAAATGTCTGGGTCTGGGGAATGAGAGTTGCTGACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR TCA 72 bp | GCCAAGCCCTTCAGAGTTCAGCTTCCAACCAGGAAATaGGGTCACAAGCATTACCCAGCAGCCCCTGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: AKPFRVQLPTRK*GHKHYPAAPAE Trigger: CTCTGCAGGGGCTGCTGGGTAATGCTTGTGACCTCATTTCCTGGTTGGAAGCTGAACTCTGAAGGGCTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR TCA 72 bp | CAACAAACCTACCCTTGCTGTCATGGTGAACCAGCATaGGCCTACAGAGCAAAGGGTCCCGAAGGCTGTTGG | + |
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Preference number: 3 (lower is better) Translates to: QQTYPCCHGEPA*AYRAKGPEGCW Trigger: CCAACAGCCTTCGGGACCCTTTGCTCTGTAGGCTCATGCTGGTTCACCATGACAGCAAGGGTAGGTTTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR TCA 72 bp | TCTCCGGAACGCGAAGCAAAGGCACATTCCCTCTCGTaGCTCTTCATTGGCTGGAACTTTCCTCTTCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: SPEREAKAHSLS*LFIGWNFPLPA Trigger: GGCAGGAAGAGGAAAGTTCCAGCCAATGAAGAGTCACGAGAGGGAATGTGCCTTTGCTTCGCGTTCCGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR CCA 72 bp | CGAAGCAAAGGCACATTCCCTCTCGTGACTCTTCATTaGCTGGAACTTTCCTCTTCCTGCCCCCTCAGCACA | + |
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Preference number: 3 (lower is better) Translates to: RSKGTFPLVTLH*LELSSSCPLST Trigger: TGTGCTGAGGGGGCAGGAAGAGGAAAGTTCCAGCCAATGAAGAGTCACGAGAGGGAATGTGCCTTTGCTTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR-3UTR CAA 90 bp | AAAACAGAACTGCCAAGCCCTTCAGAGTTCAGCTTCCAACCAGGAAATGAGGTCGGAGCCCGGGAGGGATaGGGGAAGAAGGCTGTAGAA | + |
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Preference number: 3 (lower is better) Translates to: KTELPSPSEFSFQPGNEVGAREG*GKKAVE Trigger: TTCTACAGCCTTCTTCCCCAATCCCTCCCGGGCTCC...GACCTCATTTCCTGGTTGGAAGCTGAACTCTGAAGGGCTTGGCAGTTCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR TCA 72 bp | GTACTCAGAACAACAAACCTACCCTTGCTGTCATGGTaGACCAGCATGAGCCTACAGAGCAAAGGGTCCCGA | + |
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Preference number: 3 (lower is better) Translates to: VLRTTNLPLLSW*TSMSLQSKGSR Trigger: TCGGGACCCTTTGCTCTGTAGGCTCATGCTGGTTCACCATGACAGCAAGGGTAGGTTTGTTGTTCTGAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR GCA 72 bp | ATGAGGATTAGGACAGTGACAAGACCAGCAGGGAGGTaGGTATGTGAGCATGTGTCTGTCTCTTTCTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: MRIRTVTRPAGR*VCEHVSVSFSP Trigger: AGGAGAGAAAGAGACAGACACATGCTCACATACGCACCTCCCTGCTGGTCTTGTCACTGTCCTAATCCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR GCA 72 bp | CTCGTGACTCTTCATTGGCTGGAACTTTCCTCTTCCTaGCCCCTCAGCACAGCTCAAGTATTTCTGATAGAA | + |
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Preference number: 3 (lower is better) Translates to: LVTLHWLELSSS*PLSTAQVFLIE Trigger: TTCTATCAGAAATACTTGAGCTGTGCTGAGGGGGCAGGAAGAGGAAAGTTCCAGCCAATGAAGAGTCACGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR TCA 72 bp | TTCCTTAAGTCTCCATATCAACTGTTAACCAGTGAATaGCACAAGTCGGCACAGGCTTGTCCCACAGGTACT | + |
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Preference number: 3 (lower is better) Translates to: FLKSPYQLLTSE*HKSAQACPTGT Trigger: AGTACCTGTGGGACAAGCCTGTGCCGACTTGTGTCATTCACTGGTTAACAGTTGATATGGAGACTTAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR TCA 72 bp | CAGGGTACTCGGAATCAGAGAGCAGAAGGGATGAACTaGGAACTTGAGTTGTTTGCATTTCCAGATTTGCAT | + |
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Preference number: 3 (lower is better) Translates to: QGTRNQRAEGMN*ELELFAFPDLH Trigger: ATGCAAATCTGGAAATGCAAACAACTCAAGTTCTCAGTTCATCCCTTCTGCTCTCTGATTCCGAGTACCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR TCA 72 bp | TCTGACAGGGTACTCGGAATCAGAGAGCAGAAGGGATaGACTGAGAACTTGAGTTGTTTGCATTTCCAGATT | + |
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Preference number: 3 (lower is better) Translates to: SDRVLGIREQKG*TENLSCLHFQI Trigger: AATCTGGAAATGCAAACAACTCAAGTTCTCAGTTCATCCCTTCTGCTCTCTGATTCCGAGTACCCTGTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR CCA 72 bp | GTGAAGTTTGTTCACCGAGTTCTTTTTCTTAGTTGCTaGGCAAAGCCCATGAGGATTAGGACAGTGACAAGA | + |
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Preference number: 3 (lower is better) Translates to: VKFVHRVLFLSC*AKPMRIRTVTR Trigger: TCTTGTCACTGTCCTAATCCTCATGGGCTTTGCCCAGCAACTAAGAAAAAGAACTCGGTGAACAAACTTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR GCA 72 bp | ATAGTGAAGTTTGTTCACCGAGTTCTTTTTCTTAGTTaGTGGGCAAAGCCCATGAGGATTAGGACAGTGACA | + |
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Preference number: 3 (lower is better) Translates to: IVKFVHRVLFLS*WAKPMRIRTVT Trigger: TGTCACTGTCCTAATCCTCATGGGCTTTGCCCAGCAACTAAGAAAAAGAACTCGGTGAACAAACTTCACTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS-3UTR TCA 90 bp | AGGACAGTGACAAGACCAGCAGGGAGGTGCGTATGTGAGCATGTGTCTGTCTCTGCCGCTGTAACTTCCTaGGCCGCCGCCACCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: RTVTRPAGRCVCEHVSVSAAVTS*AAATAA Trigger: GGCGGCGGTGGCGGCGGCTCAGGAAGTTACAGCGGC...AGAGACAGACACATGCTCACATACGCACCTCCCTGCTGGTCTTGTCACTGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR CAA 72 bp | CCAAGTCAGCAACTCTCATTCCCCAGACCCAGACATTaGCAAGGAGCAGCGCTGCCCCACAGGTGCCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: PSQQLSFPRPRH*QGAALPHRCPA Trigger: TGCCGGGCACCTGTGGGGCAGCGCTGCTCCTTGCAAATGTCTGGGTCTGGGGAATGAGAGTTGCTGACTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS-3UTR GCA 90 bp | GCGCTGCCCCACAGGTGCCCGGCATTTGAGCAGTTCTCAGCAGGGAATGGGCGGTTCCCAGCTGTAATCTaGAGCTCCTGGTACTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: ALPHRCPAFEQFSAGNGRFPAVI*SSWYLV Trigger: GACCAAGTACCAGGAGCTGCAGATTACAGCTGGGAA...CCGCCCATTCCCTGCTGAGAACTGCTCAAATGCCGGGCACCTGTGGGGCAGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS-3UTR TCA 90 bp | AGGCACATTCCCTCTCGTGACTCTTCATTGGCTGGAACTTTCCTCTTCCTGCCCACCGAGATGCTCACTTaGCTCTGCAGCGCCCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: RHIPSRDSSLAGTFLFLPTEMLT*LCSAPD Trigger: GTCGGGGGCGCTGCAGAGTCAAGTGAGCATCTCGGT...GGGCAGGAAGAGGAAAGTTCCAGCCAATGAAGAGTCACGAGAGGGAATGTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS-3UTR GCA 90 bp | GCGCTGCCCCACAGGTGCCCGGCATTTGAGCAGTTCTCAGCAGGGAATGGGCGGCTGAGATCTCCATCTTaGTATTCTTCAGGTCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: ALPHRCPAFEQFSAGNGRLRSPS*YSSGRL Trigger: GAGACGACCTGAAGAATAGCAAGATGGAGATCTCAG...CCGCCCATTCCCTGCTGAGAACTGCTCAAATGCCGGGCACCTGTGGGGCAGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS-3UTR CCA 90 bp | CGGAACGCGAAGCAAAGGCACATTCCCTCTCGTGACTCTTCATTGGCTGGAACTGGCTGCTGGTCCGGGTaGAGGTGTTCACCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: RNAKQRHIPSRDSSLAGTGCWSG*RCSPAA Trigger: TGCAGCAGGTGAACACCTCCACCCGGACCAGCAGCC...AGTTCCAGCCAATGAAGAGTCACGAGAGGGAATGTGCCTTTGCTTCGCGTTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS-3UTR CCA 90 bp | CGGAACGCGAAGCAAAGGCACATTCCCTCTCGTGACTCTTCATTGGCTGGAACTCGCCACCGCCGCCAATaGTCACCTGGCTACTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: RNAKQRHIPSRDSSLAGTRHRRQ*SPGYSA Trigger: TGCAGAGTAGCCAGGTGACCATTGGCGGCGGTGGCG...AGTTCCAGCCAATGAAGAGTCACGAGAGGGAATGTGCCTTTGCTTCGCGTTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS-3UTR TCA 90 bp | AGGCACATTCCCTCTCGTGACTCTTCATTGGCTGGAACTTTCCTCTTCCTGCCCCTCGTACGGCATCGATaGTGCTGTCCAGGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RHIPSRDSSLAGTFLFLPLVRHR*CCPGPG Trigger: CCCTGGACCTGGACAGCATCATCGATGCCGTACGAG...GGGCAGGAAGAGGAAAGTTCCAGCCAATGAAGAGTCACGAGAGGGAATGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS-3UTR GCA 90 bp | GCGCTGCCCCACAGGTGCCCGGCATTTGAGCAGTTCTCAGCAGGGAATGGGCGGCCTCAGCCTCATCTTTaGTCTTCTGTGCAATTATTT | + |
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Preference number: 4 (lower is better) Translates to: ALPHRCPAFEQFSAGNGRPQPHL*SSVQLF Trigger: AAATAATTGCACAGAAGAGCAAAGATGAGGCTGAGG...CCGCCCATTCCCTGCTGAGAACTGCTCAAATGCCGGGCACCTGTGGGGCAGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS-3UTR GCA 90 bp | CAGAACTGCCAAGCCCTTCAGAGTTCAGCTTCCAACCAGGAAATGAGGTCACAAGCGCCCCCGACATCCTaGTCTCCTCGCCCTCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: QNCQALQSSASNQEMRSQAPPTS*SPRPPK Trigger: TTTTGGAGGGCGAGGAGAGCAGGATGTCGGGGGCGC...TTGTGACCTCATTTCCTGGTTGGAAGCTGAACTCTGAAGGGCTTGGCAGTTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS-3UTR CCA 90 bp | AGGCCGCCGCGCGGGGACTTAATATTTACTGAACTGTCCAGTTTAGGAACAGGGCGTCCAAGGACAGCTTaGCACCCAGCATTGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: RPPRGDLIFTELSSLGTGRPRTA*HPALPG Trigger: ACCAGGCAATGCTGGGTGCCAAGCTGTCCTTGGACG...CCCTGTTCCTAAACTGGACAGTTCAGTAAATATTAAGTCCCCGCGCGGCGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS-3UTR CCA 90 bp | AGGACAGTGACAAGACCAGCAGGGAGGTGCGTATGTGAGCATGTGTCTGTCTCTCCGCCAATGGTCACCTaGCTACTCTGCACCGAGATG | + |
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Preference number: 4 (lower is better) Translates to: RTVTRPAGRCVCEHVSVSPPMVT*LLCTEM Trigger: CATCTCGGTGCAGAGTAGCCAGGTGACCATTGGCGG...AGAGACAGACACATGCTCACATACGCACCTCCCTGCTGGTCTTGTCACTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| 3UTR CAA 72 bp | CATTGGGAAAAGATAGGTGAGGGAGCCCGGGAGGGATaGGGGAAGAAGGCTGTAGAAGTGCAAGGACTTGGC | + |
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Preference number: 4 (lower is better) Translates to: HWEKIGEGAREG*GKKAVEVQGLG Trigger: GCCAAGTCCTTGCACTTCTACAGCCTTCTTCCCCAATCCCTCCCGGGCTCCCTCACCTATCTTTTCCCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS-3UTR CCA 90 bp | AGACAAAGTCTGACAGGGTACTCGGAATCAGAGAGCAGAAGGGATGAACTGAGACTGGCTCCAGGCTGCTaGTCCGGGTGGAGGTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: RQSLTGYSESESRRDELRLAPGC*SGWRCS Trigger: TGAACACCTCCACCCGGACCAGCAGCCTGGAGCCAG...TCTCAGTTCATCCCTTCTGCTCTCTGATTCCGAGTACCCTGTCAGACTTTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS-3UTR CCA 90 bp | AGGACAGTGACAAGACCAGCAGGGAGGTGCGTATGTGAGCATGTGTCTGTCTCTTCCTCCTTAGCCTGCTaGAGGGCCTCTTCCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: RTVTRPAGRCVCEHVSVSSSLAC*RASSMS Trigger: AGACATGGAAGAGGCCCTCCAGCAGGCTAAGGAGGA...AGAGACAGACACATGCTCACATACGCACCTCCCTGCTGGTCTTGTCACTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS-3UTR GCA 90 bp | AGGACAGTGACAAGACCAGCAGGGAGGTGCGTATGTGAGCATGTGTCTGTCTCTTCCTCCACGACATCCTaGATGTTCCTGATCTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: RTVTRPAGRCVCEHVSVSSSTTS*MFLISV Trigger: CACGGAGATCAGGAACATGCAGGATGTCGTGGAGGA...AGAGACAGACACATGCTCACATACGCACCTCCCTGCTGGTCTTGTCACTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS-3UTR GCA 90 bp | AGGACAGTGACAAGACCAGCAGGGAGGTGCGTATGTGAGCATGTGTCTGTCTCTGCCTCTTCCATGTCTTaGAGCTTCTGCTTGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTVTRPAGRCVCEHVSVSASSMS*SFCLAF Trigger: GAACGCCAAGCAGAAGCTGCAAGACATGGAAGAGGC...AGAGACAGACACATGCTCACATACGCACCTCCCTGCTGGTCTTGTCACTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CCA 90 bp | CGGAACGCGAAGCAAAGGCACATTCCCTCTCGTGACTCTTCATTGGCTGGAACTTCTGGCAGAAACCACTaGCACTTCGTCCCACTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RNAKQRHIPSRDSSLAGTSGRNH*HFVPLG Trigger: ACCTAGTGGGACGAAGTGCCAGTGGTTTCTGCCAGA...AGTTCCAGCCAATGAAGAGTCACGAGAGGGAATGTGCCTTTGCTTCGCGTTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CCA 90 bp | AGGACAGTGACAAGACCAGCAGGGAGGTGCGTATGTGAGCATGTGTCTGTCTCTTCCAAATCCTCCTCCTaGCCCTCTACTCTGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RTVTRPAGRCVCEHVSVSSKSSS*PSTLAE Trigger: TTCTGCCAGAGTAGAGGGCCAGGAGGAGGATTTGGA...AGAGACAGACACATGCTCACATACGCACCTCCCTGCTGGTCTTGTCACTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CCA 90 bp | CGGAACGCGAAGCAAAGGCACATTCCCTCTCGTGACTCTTCATTGGCTGGAACTTTCTGCTTGGCGTTCTaGAGAGCCCTTTCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RNAKQRHIPSRDSSLAGTFCLAF*RALSPL Trigger: GAGAGGAGAAAGGGCTCTCCAGAACGCCAAGCAGAA...AGTTCCAGCCAATGAAGAGTCACGAGAGGGAATGTGCCTTTGCTTCGCGTTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CCA 90 bp | CAGAACTGCCAAGCCCTTCAGAGTTCAGCTTCCAACCAGGAAATGAGGTCACAATACGCGAGCTGTGGGTaGAGGTCTGCAGGATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QNCQALQSSASNQEMRSQYASCG*RSAGSE Trigger: CTCAGATCCTGCAGACCTCCACCCACAGCTCGCGTA...TTGTGACCTCATTTCCTGGTTGGAAGCTGAACTCTGAAGGGCTTGGCAGTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CCA 90 bp | AAAACAGAACTGCCAAGCCCTTCAGAGTTCAGCTTCCAACCAGGAAATGAGGTCTGCCTACGCGAGCTGTaGGTGGAGGTCTGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KTELPSPSEFSFQPGNEVCLREL*VEVCRI Trigger: GATCCTGCAGACCTCCACCCACAGCTCGCGTAGGCA...GACCTCATTTCCTGGTTGGAAGCTGAACTCTGAAGGGCTTGGCAGTTCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| 3UTR CAA 72 bp | GGGGGTTGCTGGAAGGGGATGGGACAGAAACAGAACTaGATTAACCACCCTATCCTATCCACACCCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGCWKGMGQKQN*INHPILSTPTA Trigger: AGCAGTGGGTGTGGATAGGATAGGGTGGTTAATCAAGTTCTGTTTCTGTCCCATCCCCTTCCAGCAACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR TCA 90 bp | AGGCCGCCGCGCGGGGACTTAATATTTACTGAACTGTCCAGTTTAGGAACAGGGAGAGACTCCTGGAACTaGACCCACCACCATAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: RPPRGDLIFTELSSLGTGRDSWN*THHHNH Trigger: GTGATTATGGTGGTGGGTTCAGTTCCAGGAGTCTCT...CCCTGTTCCTAAACTGGACAGTTCAGTAAATATTAAGTCCCCGCGCGGCGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CCA 90 bp | AAAACAGAACTGCCAAGCCCTTCAGAGTTCAGCTTCCAACCAGGAAATGAGGTCGCAGCTCCTGGTACTTaGTCTGGTACAGGGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTELPSPSEFSFQPGNEVAAPGT*SGTGPQ Trigger: CTGAGGCCCTGTACCAGACCAAGTACCAGGAGCTGC...GACCTCATTTCCTGGTTGGAAGCTGAACTCTGAAGGGCTTGGCAGTTCTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR TCA 90 bp | CACCGAGTTCTTTTTCTTAGTTGCTGGGCAAAGCCCATGAGGATTAGGACAGTGCCCGCTCCTGGGTCTTaGCCCTCTGAATTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HRVLFLSCWAKPMRIRTVPAPGS*PSEFQD Trigger: ATCCTGAAATTCAGAGGGTCAAGACCCAGGAGCGGG...CACTGTCCTAATCCTCATGGGCTTTGCCCAGCAACTAAGAAAAAGAACTCGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR TCA 90 bp | AGGCCGCCGCGCGGGGACTTAATATTTACTGAACTGTCCAGTTTAGGAACAGGGTTTGGACTGCAAGTCTaGTTTGCCCATGAAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPPRGDLIFTELSSLGTGFGLQV*FAHESS Trigger: GCTGCTTTCATGGGCAAATCAGACTTGCAGTCCAAA...CCCTGTTCCTAAACTGGACAGTTCAGTAAATATTAAGTCCCCGCGCGGCGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR GCA 90 bp | AGACAAAGTCTGACAGGGTACTCGGAATCAGAGAGCAGAAGGGATGAACTGAGATACTCTGCACCGAGATaGTCACTTGACTCTGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RQSLTGYSESESRRDELRYSAPR*SLDSAA Trigger: CGCTGCAGAGTCAAGTGAGCATCTCGGTGCAGAGTA...TCTCAGTTCATCCCTTCTGCTCTCTGATTCCGAGTACCCTGTCAGACTTTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CCA 90 bp | AGGACAGTGACAAGACCAGCAGGGAGGTGCGTATGTGAGCATGTGTCTGTCTCTACAGTGTGTCTACTTTaGACTGCAAGTCTGATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTVTRPAGRCVCEHVSVSTVCLL*TASLIC Trigger: GCAAATCAGACTTGCAGTCCAAAGTAGACACACTGT...AGAGACAGACACATGCTCACATACGCACCTCCCTGCTGGTCTTGTCACTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CCA 90 bp | CAGAAACAGAACTTGATTAACCACCCTATCCTATCCACACCCACTGCTAAGGACGGCTCCAGGAGACTCTaGTTAATAGTCACCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QKQNLINHPILSTPTAKDGSRRL*LIVTSW Trigger: CCATGAGGTGACTATTAACCAGAGTCTCCTGGAGCC...GTCCTTAGCAGTGGGTGTGGATAGGATAGGGTGGTTAATCAAGTTCTGTTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR GCA 90 bp | AACAGGGACCTGGGACTGAGGCTCATAGTGAAGTTTGTTCACCGAGTTCTTTTTTCAGAAATCAATCCGTaGATCCCTTCGACCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRDLGLRLIVKFVHRVLFSEINP*IPSTCF Trigger: GAAGCAGGTCGAAGGGATGCACGGATTGATTTCTGA...AAAAAGAACTCGGTGAACAAACTTCACTATGAGCCTCAGTCCCAGGTCCCTGTT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR TCA 90 bp | AGGCTCATAGTGAAGTTTGTTCACCGAGTTCTTTTTCTTAGTTGCTGGGCAAAGAGTCTGATTTGCCCATaGAAGCAGCATCCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLIVKFVHRVLFLSCWAKSLICP*KQHPRP Trigger: AGGACGTGGATGCTGCTTTCATGGGCAAATCAGACT...CTTTGCCCAGCAACTAAGAAAAAGAACTCGGTGAACAAACTTCACTATGAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR TCA 90 bp | AGGCTCATAGTGAAGTTTGTTCACCGAGTTCTTTTTCTTAGTTGCTGGGCAAAGGCGGTTATTGTCCATTaGCAAGATGACATTGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: RLIVKFVHRVLFLSCWAKAVIVH*QDDIGI Trigger: GATACCAATGTCATCTTGTCAATGGACAATAACCGC...CTTTGCCCAGCAACTAAGAAAAAGAACTCGGTGAACAAACTTCACTATGAGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS TCA 90 bp | TCCGCCGCCACCACCGCCTCCGCGGGAGCTGCCGCTGTAACTTCCTaGGCCGCCGCCACCGCCGCCAATGGTCACCTGGCTACTCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SAATTASAGAAAVTS*AAATAANGHLATLH Trigger: GTGCAGAGTAGCCAGGTGACCATTGGCGGCGGTGGCGGCGGCTCAGGAAGTTACAGCGGCAGCTCCCGCGGAGGCGGTGGTGGCGGCGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS GCA 90 bp | CGCCGCCACCGCCGCCAATGGTCACCTGGCTACTCTGCACCGAGATaGTCACTTGACTCTGCAGCGCCCCCGACATCCTGCTCTCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RRHRRQWSPGYSAPR*SLDSAAPPTSCSPR Trigger: GCGAGGAGAGCAGGATGTCGGGGGCGCTGCAGAGTCAAGTGAGCATCTCGGTGCAGAGTAGCCAGGTGACCATTGGCGGCGGTGGCGGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS TCA 90 bp | TCCACCACGTGCCTACGCGAGCTGTGGGTGGAGGTCTGCAGGATCTaGGTGCGGGAGGAGCCGCCGCCGCTGCCATATTTAGTGGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: STTCLRELWVEVCRI*VREEPPPLPYLVAL Trigger: AAGCGCCACTAAATATGGCAGCGGCGGCGGCTCCTCCCGCACTCAGATCCTGCAGACCTCCACCCACAGCTCGCGTAGGCACGTGGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS TCA 90 bp | CCGCCGCCAATGGTCACCTGGCTACTCTGCACCGAGATGCTCACTTaGCTCTGCAGCGCCCCCGACATCCTGCTCTCCTCGCCCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PPPMVTWLLCTEMLT*LCSAPDILLSSPSK Trigger: TTTGGAGGGCGAGGAGAGCAGGATGTCGGGGGCGCTGCAGAGTCAAGTGAGCATCTCGGTGCAGAGTAGCCAGGTGACCATTGGCGGCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS CCA 90 bp | GGGAGCTGCCGCTGTAACTTCCTGAGCCGCCGCCACCGCCGCCAATaGTCACCTGGCTACTCTGCACCGAGATGCTCACTTGACTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSCRCNFLSRRHRRQ*SPGYSAPRCSLDSA Trigger: TGCAGAGTCAAGTGAGCATCTCGGTGCAGAGTAGCCAGGTGACCATTGGCGGCGGTGGCGGCGGCTCAGGAAGTTACAGCGGCAGCTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CAA 90 bp | GCGCTGCCCCACAGGTGCCCGGCATTTGAGCAGTTCTCAGCAGGGAATGGGCGGGACTGCAAGTCTGATTaGCCCATGAAAGCAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: ALPHRCPAFEQFSAGNGRDCKSD*PMKAAS Trigger: GGATGCTGCTTTCATGGGCAAATCAGACTTGCAGTC...CCGCCCATTCCCTGCTGAGAACTGCTCAAATGCCGGGCACCTGTGGGGCAGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CAA 90 bp | AGGCACATTCCCTCTCGTGACTCTTCATTGGCTGGAACTTTCCTCTTCCTGCCCCACCGAGATGCTCACTaGACTCTGCAGCGCCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RHIPSRDSSLAGTFLFLPHRDAH*TLQRPR Trigger: TCGGGGGCGCTGCAGAGTCAAGTGAGCATCTCGGTG...GGGCAGGAAGAGGAAAGTTCCAGCCAATGAAGAGTCACGAGAGGGAATGTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CAA 90 bp | AGGCACATTCCCTCTCGTGACTCTTCATTGGCTGGAACTTTCCTCTTCCTGCCCTGCAGCTCCTGGTACTaGGTCTGGTACAGGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RHIPSRDSSLAGTFLFLPCSSWY*VWYRAS Trigger: TGAGGCCCTGTACCAGACCAAGTACCAGGAGCTGCA...GGGCAGGAAGAGGAAAGTTCCAGCCAATGAAGAGTCACGAGAGGGAATGTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CAA 90 bp | AGGACAGTGACAAGACCAGCAGGGAGGTGCGTATGTGAGCATGTGTCTGTCTCTGGCCTCTTCCATGTCTaGCAGCTTCTGCTTGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: RTVTRPAGRCVCEHVSVSGLFHV*QLLLGV Trigger: AACGCCAAGCAGAAGCTGCAAGACATGGAAGAGGCC...AGAGACAGACACATGCTCACATACGCACCTCCCTGCTGGTCTTGTCACTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CAA 90 bp | CCCAGCAGCCCCTGCAGAGAAGCTCTCCCGGACAGAATTATCAACTCAGCGGTTTCCAGGGAGCGGTTATaGTCCATTGACAAGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: PSSPCREALPDRIINSAVSRERL*SIDKMT Trigger: TGTCATCTTGTCAATGGACAATAACCGCTCCCTGGA...AACCGCTGAGTTGATAATTCTGTCCGGGAGAGCTTCTCTGCAGGGGCTGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CAA 90 bp | CACCGAGTTCTTTTTCTTAGTTGCTGGGCAAAGCCCATGAGGATTAGGACAGTGTCTTGCAGCTTCTGCTaGGCGTTCTGGAGAGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HRVLFLSCWAKPMRIRTVSCSFC*AFWRAL Trigger: AAGGGCTCTCCAGAACGCCAAGCAGAAGCTGCAAGA...CACTGTCCTAATCCTCATGGGCTTTGCCCAGCAACTAAGAAAAAGAACTCGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CAA 90 bp | CAGAAACAGAACTTGATTAACCACCCTATCCTATCCACACCCACTGCTAAGGACCCTTCGACCTGCTTCTaGATATTGGCGATCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QKQNLINHPILSTPTAKDPSTCF*ILAISA Trigger: GGCAGAGATCGCCAATATCAAGAAGCAGGTCGAAGG...GTCCTTAGCAGTGGGTGTGGATAGGATAGGGTGGTTAATCAAGTTCTGTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CAA 90 bp | AGGCTCATAGTGAAGTTTGTTCACCGAGTTCTTTTTCTTAGTTGCTGGGCAAAGGCTTGGCACCCAGCATaGCCTGGTAGTCTCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLIVKFVHRVLFLSCWAKAWHPA*PGSLSA Trigger: TGCTGAGAGACTACCAGGCAATGCTGGGTGCCAAGC...CTTTGCCCAGCAACTAAGAAAAAGAACTCGGTGAACAAACTTCACTATGAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS-3UTR CAA 90 bp | AGACAAAGTCTGACAGGGTACTCGGAATCAGAGAGCAGAAGGGATGAACTGAGAGCCTCAGCCTCATCTTaGCTCTTCTGTGCAATTATT | + |
|
Preference number: 5 (lower is better) Translates to: RQSLTGYSESESRRDELRASASS*LFCAII Trigger: AATAATTGCACAGAAGAGCAAAGATGAGGCTGAGGC...TCTCAGTTCATCCCTTCTGCTCTCTGATTCCGAGTACCCTGTCAGACTTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS TCA 90 bp | CCCCATACAGTGTGTCTACTTTGGACTGCAAGTCTGATTTGCCCATaGAAGCAGCATCCACGTCCTTCTTCAGAACAACAAAGTCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: PHTVCLLWTASLICP*KQHPRPSSEQQSHF Trigger: AAAATGACTTTGTTGTTCTGAAGAAGGACGTGGATGCTGCTTTCATGGGCAAATCAGACTTGCAGTCCAAAGTAGACACACTGTATGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS CCA 90 bp | TCCATTGACAAGATGACATTGGTATCACTGACGTGGGTTTGTATCTaGGACAGCTCCGTATCAAATAGATATTTCAGGAAGTTGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SIDKMTLVSLTWVCI*DSSVSNRYFRKLIS Trigger: GGAGATCAACTTCCTGAAATATCTATTTGATACGGAGCTGTCCCAGATACAAACCCACGTCAGTGATACCAATGTCATCTTGTCAATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS TCA 72 bp | ACCACCGCCTCCGCGGGAGCTGCCGCTGTAACTTCCTaGGCCGCCGCCACCGCCGCCAATGGTCACCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TTASAGAAAVTS*AAATAANGHLA Trigger: AGCCAGGTGACCATTGGCGGCGGTGGCGGCGGCTCAGGAAGTTACAGCGGCAGCTCCCGCGGAGGCGGTGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS GCA 72 bp | CGCCGCCAATGGTCACCTGGCTACTCTGCACCGAGATaGTCACTTGACTCTGCAGCGCCCCCGACATCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRQWSPGYSAPR*SLDSAAPPTSC Trigger: GCAGGATGTCGGGGGCGCTGCAGAGTCAAGTGAGCATCTCGGTGCAGAGTAGCCAGGTGACCATTGGCGGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS CAA 90 bp | ACCGCCGCCAATGGTCACCTGGCTACTCTGCACCGAGATGCTCACTaGACTCTGCAGCGCCCCCGACATCCTGCTCTCCTCGCCCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: TAANGHLATLHRDAH*TLQRPRHPALLALQ Trigger: TTGGAGGGCGAGGAGAGCAGGATGTCGGGGGCGCTGCAGAGTCAAGTGAGCATCTCGGTGCAGAGTAGCCAGGTGACCATTGGCGGCGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS CCA 72 bp | CGCTGTAACTTCCTGAGCCGCCGCCACCGCCGCCAATaGTCACCTGGCTACTCTGCACCGAGATGCTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: RCNFLSRRHRRQ*SPGYSAPRCSL Trigger: AAGTGAGCATCTCGGTGCAGAGTAGCCAGGTGACCATTGGCGGCGGTGGCGGCGGCTCAGGAAGTTACAGCG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS TCA 72 bp | ATGGTCACCTGGCTACTCTGCACCGAGATGCTCACTTaGCTCTGCAGCGCCCCCGACATCCTGCTCTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: MVTWLLCTEMLT*LCSAPDILLSS Trigger: CGAGGAGAGCAGGATGTCGGGGGCGCTGCAGAGTCAAGTGAGCATCTCGGTGCAGAGTAGCCAGGTGACCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS GCA 72 bp | GCCTGCTGGAGGGCCTCTTCCATGTCTTGCAGCTTCTaGTTGGCGTTCTGGAGAGCCCTTTCTCCTCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ACWRASSMSCSF*LAFWRALSPLS Trigger: GGAGAGAGGAGAAAGGGCTCTCCAGAACGCCAAGCAGAAGCTGCAAGACATGGAAGAGGCCCTCCAGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS CAA 72 bp | AATGGTCACCTGGCTACTCTGCACCGAGATGCTCACTaGACTCTGCAGCGCCCCCGACATCCTGCTCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: NGHLATLHRDAH*TLQRPRHPALL Trigger: GAGGAGAGCAGGATGTCGGGGGCGCTGCAGAGTCAAGTGAGCATCTCGGTGCAGAGTAGCCAGGTGACCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS GCA 72 bp | TCCTGCATGTTCCTGATCTCCGTGTTCTGGCGCAACTaGTCGGTGGTCAGAACATCCACCTGCCTCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCMFLISVFWRN*SVVRTSTCLCS Trigger: GCTGCAGAGGCAGGTGGATGTTCTGACCACCGAGCAGTTGCGCCAGAACACGGAGATCAGGAACATGCAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS GCA 72 bp | GATCTCTACGTCCAAGGACAGCTTGGCACCCAGCATTaGCTGGTAGTCTCTCAGCAGCTTGGCCAGATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DLYVQGQLGTQH*LVVSQQLGQIL Trigger: GAGGATCTGGCCAAGCTGCTGAGAGACTACCAGGCAATGCTGGGTGCCAAGCTGTCCTTGGACGTAGAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS GCA 72 bp | TTCTTCAGGTCGTCTCCGTGTTTCCCAGCTGTAATCTaGAGCTCCTGGTACTTGGTCTGGTACAGGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FFRSSPCFPAVI*SSWYLVWYRAS Trigger: TGAGGCCCTGTACCAGACCAAGTACCAGGAGCTGCAGATTACAGCTGGGAAACACGGAGACGACCTGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS GCA 72 bp | CTTTCTCCTCTCTCCTCCGCATCAGAAATCAATCCGTaGATCCCTTCGACCTGCTTCTTGATATTGGCGATC | + |
|
Preference number: 6 (lower is better) Translates to: LSPLSSASEINP*IPSTCFLILAI Trigger: GATCGCCAATATCAAGAAGCAGGTCGAAGGGATGCACGGATTGATTTCTGATGCGGAGGAGAGAGGAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS CAA 72 bp | CCATACAGTGTGTCTACTTTGGACTGCAAGTCTGATTaGCCCATGAAAGCAGCATCCACGTCCTTCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PYSVSTLDCKSD*PMKAASTSFFR Trigger: TCTGAAGAAGGACGTGGATGCTGCTTTCATGGGCAAATCAGACTTGCAGTCCAAAGTAGACACACTGTATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS CAA 90 bp | TTGATCTCCCCATACAGTGTGTCTACTTTGGACTGCAAGTCTGATTaGCCCATGAAAGCAGCATCCACGTCCTTCTTCAGAACAACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LISPYSVSTLDCKSD*PMKAASTSFFRTTK Trigger: CTTTGTTGTTCTGAAGAAGGACGTGGATGCTGCTTTCATGGGCAAATCAGACTTGCAGTCCAAAGTAGACACACTGTATGGGGAGATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS TCA 72 bp | GTGTGTCTACTTTGGACTGCAAGTCTGATTTGCCCATaGAAGCAGCATCCACGTCCTTCTTCAGAACAACAA | + |
|
Preference number: 6 (lower is better) Translates to: VCLLWTASLICP*KQHPRPSSEQQ Trigger: TTGTTGTTCTGAAGAAGGACGTGGATGCTGCTTTCATGGGCAAATCAGACTTGCAGTCCAAAGTAGACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
||
| CDS TCA 72 bp | GGGACAGCTCCGTATCAAATAGATATTTCAGGAAGTTaGTCTCCCCATACAGTGTGTCTACTTTGGACTGCA | + |
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Preference number: 6 (lower is better) Translates to: GTAPYQIDISGS*SPHTVCLLWTA Trigger: TGCAGTCCAAAGTAGACACACTGTATGGGGAGATCAACTTCCTGAAATATCTATTTGATACGGAGCTGTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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| CDS CAA 72 bp | TGGGACAGCTCCGTATCAAATAGATATTTCAGGAAGTaGATCTCCCCATACAGTGTGTCTACTTTGGACTGC | + |
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Preference number: 6 (lower is better) Translates to: WDSSVSNRYFRK*ISPYSVSTLDC Trigger: GCAGTCCAAAGTAGACACACTGTATGGGGAGATCAACTTCCTGAAATATCTATTTGATACGGAGCTGTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087996.7 |
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