RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KRT76 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000075402

Ensembl transcript IDs: ENSMUST00000100179.2

Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CTGGTACTGCTGACCACATTTCAGATTCACCACAGGCTCTTCTCTAGGAGCGCCTTGATGCCAAGAAGTTaGGAGCAGATGCCATTGCAG +
Preference number: 2 (lower is better)
Translates to: LVLLTTFQIHHRLFSRSALMPRS*EQMPLQ
Trigger: CTGCAATGGCATCTGCTCCCAACTTCTTGGCATCAA...GGCGCTCCTAGAGAAGAGCCTGTGGTGAATCTGAAATGTGGTCAGCAGTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp GGGAGCAGATGCCATTGCAGGCTGAGGCAGGGAAAGCAGGAGGGTGTGGATGCTTGCTGCTGCTGCTGCTaGCGCCGCTTCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GSRCHCRLRQGKQEGVDACCCCC*RRFCHC
Trigger: GCAGTGGCAGAAGCGGCGGCAGCAGCAGCAGCAGCA...AGCATCCACACCCTCCTGCTTTCCCTGCCTCAGCCTGCAATGGCATCTGCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR TCA 90 bp CATTGCAGGCTGAGGCAGGGAAAGCAGGAGGGTGTGGATGCTTTGCCCCTGAAGGCCAGATACCACAGCTaGGTGGCCAGAGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: HCRLRQGKQEGVDALPLKARYHS*VAREAL
Trigger: CAGGGCTTCTCTGGCCACTCAGCTGTGGTATCTGGC...CTTCAGGGGCAAAGCATCCACACCCTCCTGCTTTCCCTGCCTCAGCCTGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp CATTGCAGGCTGAGGCAGGGAAAGCAGGAGGGTGTGGATGCTTTGCCCCTGAAGCCAGAGCGTATGGTCTaGTGCTGCAGCAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: HCRLRQGKQEGVDALPLKPERMV*CCSSSH
Trigger: GTGGGAGCTGCTGCAGCAGCAGACCATACGCTCTGG...CTTCAGGGGCAAAGCATCCACACCCTCCTGCTTTCCCTGCCTCAGCCTGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp GGGAGCAGATGCCATTGCAGGCTGAGGCAGGGAAAGCAGGAGGGTGTGGATGCTGAGAGAACTGAACACTaGTGCTGCCTCCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GSRCHCRLRQGKQEGVDAERTEH*CCLLCQ
Trigger: CTGGCAGAGGAGGCAGCAGCAGTGTTCAGTTCTCTC...AGCATCCACACCCTCCTGCTTTCCCTGCCTCAGCCTGCAATGGCATCTGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp GGGAGCAGATGCCATTGCAGGCTGAGGCAGGGAAAGCAGGAGGGTGTGGATGCTGGTCATCACCATGCCTaGCAGCTGTGGTCTGTAACT +
Preference number: 4 (lower is better)
Translates to: GSRCHCRLRQGKQEGVDAGHHHA*QLWSVT
Trigger: AGTTACAGACCACAGCTGGCAGGCATGGTGATGACC...AGCATCCACACCCTCCTGCTTTCCCTGCCTCAGCCTGCAATGGCATCTGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp GGGAGCAGATGCCATTGCAGGCTGAGGCAGGGAAAGCAGGAGGGTGTGGATGCTACTGAACACTGCTGCTaGCTCCTCTGCCAGACTTGT +
Preference number: 4 (lower is better)
Translates to: GSRCHCRLRQGKQEGVDATEHCC*LLCQTC
Trigger: ACAAGTCTGGCAGAGGAGGCAGCAGCAGTGTTCAGT...AGCATCCACACCCTCCTGCTTTCCCTGCCTCAGCCTGCAATGGCATCTGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR TCA 90 bp CTGGTACTGCTGACCACATTTCAGATTCACCACAGGCTCTTCTCTAGGAGCGCCCAGGTTCTGGGGTCCTaGGCCAGAGCGTATGGTCTG +
Preference number: 4 (lower is better)
Translates to: LVLLTTFQIHHRLFSRSAQVLGS*ARAYGL
Trigger: CAGACCATACGCTCTGGCTCAGGACCCCAGAACCTG...GGCGCTCCTAGAGAAGAGCCTGTGGTGAATCTGAAATGTGGTCAGCAGTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR TCA 90 bp GGGAGCAGATGCCATTGCAGGCTGAGGCAGGGAAAGCAGGAGGGTGTGGATGCTGCTTGCGCAGGCAGCTaGTGTAGGATTCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: GSRCHCRLRQGKQEGVDAACAGS*CRIQRK
Trigger: CTTTCTTTGAATCCTACATCAGCTGCCTGCGCAAGC...AGCATCCACACCCTCCTGCTTTCCCTGCCTCAGCCTGCAATGGCATCTGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR TCA 90 bp CTGGTACTGCTGACCACATTTCAGATTCACCACAGGCTCTTCTCTAGGAGCGCCTGGTATCTGCATCCTTaGGGGCCCGCTCACCACGCT +
Preference number: 4 (lower is better)
Translates to: LVLLTTFQIHHRLFSRSAWYLHP*GPAHHA
Trigger: AGCGTGGTGAGCGGGCCCTCAAGGATGCAGATACCA...GGCGCTCCTAGAGAAGAGCCTGTGGTGAATCTGAAATGTGGTCAGCAGTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp CTGGTACTGCTGACCACATTTCAGATTCACCACAGGCTCTTCTCTAGGAGCGCCCAAGTCTGCTCCCACTaGTGCCTCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LVLLTTFQIHHRLFSRSAQVCSH*CLCCCC
Trigger: GCAGCAGCAGCAGAGGCAGCAGTGGGAGCAGACTTG...GGCGCTCCTAGAGAAGAGCCTGTGGTGAATCTGAAATGTGGTCAGCAGTACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp CTGGTACTGCTGACCACATTTCAGATTCACCACAGGCTCTTCTCTAGGAGCGCCCACAGCTGCTCCTGCTaGTGCCAGATACCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LVLLTTFQIHHRLFSRSAHSCSC*CQIPQL
Trigger: CAGCTGTGGTATCTGGCAGCAGCAGGAGCAGCTGTG...GGCGCTCCTAGAGAAGAGCCTGTGGTGAATCTGAAATGTGGTCAGCAGTACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp GGGAGCAGATGCCATTGCAGGCTGAGGCAGGGAAAGCAGGAGGGTGTGGATGCTACGCTGTTCAGCCTCTaGAATGGATGTCTGCATGTT +
Preference number: 4 (lower is better)
Translates to: GSRCHCRLRQGKQEGVDATLFSL*NGCLHV
Trigger: AACATGCAGACATCCATTGCAGAGGCTGAACAGCGT...AGCATCCACACCCTCCTGCTTTCCCTGCCTCAGCCTGCAATGGCATCTGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp GGGTTGAACTGTGCACCTGTTGATGCCAAGAAGTTGGGAGCAGATGCCATTGCAGGCTCACGGAGATGCTaGCTCCACTGCCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GLNCAPVDAKKLGADAIAGSRRC*LHCQVC
Trigger: GCAGACTTGGCAGTGGAGGCAGCATCTCCGTGAGCC...TGCAATGGCATCTGCTCCCAACTTCTTGGCATCAACAGGTGCACAGTTCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp GGGTTGAACTGTGCACCTGTTGATGCCAAGAAGTTGGGAGCAGATGCCATTGCAGCTGGCTCACGGAGATaGTGCCTCCACTGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: GLNCAPVDAKKLGADAIAAGSRR*CLHCQV
Trigger: GACTTGGCAGTGGAGGCAGCATCTCCGTGAGCCAGC...TGCAATGGCATCTGCTCCCAACTTCTTGGCATCAACAGGTGCACAGTTCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR TCA 90 bp AGAAGTTGGGAGCAGATGCCATTGCAGGCTGAGGCAGGGAAAGCAGGAGGGTGTCCACAGATGTGTCACTaGCATGACTCTGTATCTGGG +
Preference number: 4 (lower is better)
Translates to: RSWEQMPLQAEAGKAGGCPQMCH*HDSVSG
Trigger: CCCAGATACAGAGTCATGTCAGTGACACATCTGTGG...ACACCCTCCTGCTTTCCCTGCCTCAGCCTGCAATGGCATCTGCTCCCAACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp GGGTTGAACTGTGCACCTGTTGATGCCAAGAAGTTGGGAGCAGATGCCATTGCACGTATGGTCTGCTGCTaGAGCAGCTCCCACTTGGTC +
Preference number: 4 (lower is better)
Translates to: GLNCAPVDAKKLGADAIARMVCC*SSSHLV
Trigger: GACCAAGTGGGAGCTGCTGCAGCAGCAGACCATACG...TGCAATGGCATCTGCTCCCAACTTCTTGGCATCAACAGGTGCACAGTTCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp GGGTTGAACTGTGCACCTGTTGATGCCAAGAAGTTGGGAGCAGATGCCATTGCAGAGCGTATGGTCTGCTaGTGCAGCAGCTCCCACTTG +
Preference number: 4 (lower is better)
Translates to: GLNCAPVDAKKLGADAIAERMVC*CSSSHL
Trigger: CAAGTGGGAGCTGCTGCAGCAGCAGACCATACGCTC...TGCAATGGCATCTGCTCCCAACTTCTTGGCATCAACAGGTGCACAGTTCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp AAAGCAGGGTTGAACTGTGCACCTGTTGATGCCAAGAAGTTGGGAGCAGATGCCTGCTGCTGCCTCCTCTaGCAGACTTGTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KAGLNCAPVDAKKLGADACCCLL*QTCSCC
Trigger: GCAGCAGCTACAAGTCTGGCAGAGGAGGCAGCAGCA...GGCATCTGCTCCCAACTTCTTGGCATCAACAGGTGCACAGTTCAACCCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CCA 90 bp CTGGTACTGCTGACCACATTTCAGATTCACCACAGGCTCTTCTCTAGGAGCGCCTGGCCAGAGAAGCCCTaGCTCCCACAACTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: LVLLTTFQIHHRLFSRSAWPEKP*LPQLKD
Trigger: ATCCTTCAGTTGTGGGAGCCAGGGCTTCTCTGGCCA...GGCGCTCCTAGAGAAGAGCCTGTGGTGAATCTGAAATGTGGTCAGCAGTACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CCA 90 bp GGGTTGAACTGTGCACCTGTTGATGCCAAGAAGTTGGGAGCAGATGCCATTGCAGATACCACAGCTGAGTaGCCAGAGAAGCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GLNCAPVDAKKLGADAIADTTAE*PEKPWL
Trigger: GAGCCAGGGCTTCTCTGGCCACTCAGCTGTGGTATC...TGCAATGGCATCTGCTCCCAACTTCTTGGCATCAACAGGTGCACAGTTCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp GGGTTGAACTGTGCACCTGTTGATGCCAAGAAGTTGGGAGCAGATGCCATTGCAAGCTGCTCCTGCTGCTaGCAGATACCACAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: GLNCAPVDAKKLGADAIASCSCC*QIPQLS
Trigger: ACTCAGCTGTGGTATCTGGCAGCAGCAGGAGCAGCT...TGCAATGGCATCTGCTCCCAACTTCTTGGCATCAACAGGTGCACAGTTCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CCA 90 bp ACCAACAGTTTGGAAACAGTTTCACCTGTGAGTGACAGATGGACAGAATGGACTCACAAGCCCCTCCACTaGCTGCCCCAGAGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: TNSLETVSPVSDRWTEWTHKPLH*LPQSEP
Trigger: TGGCTCGCTCTGGGGCAGCCAGTGGAGGGGCTTGTG...AGTCCATTCTGTCCATCTGTCACTCACAGGTGAAACTGTTTCCAAACTGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CCA 90 bp AGAAGTTGGGAGCAGATGCCATTGCAGGCTGAGGCAGGGAAAGCAGGAGGGTGTGTTCAGCCTCTGCAATaGATGTCTGCATGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: RSWEQMPLQAEAGKAGGCVQPLQ*MSACWC
Trigger: ACACCAACATGCAGACATCCATTGCAGAGGCTGAAC...ACACCCTCCTGCTTTCCCTGCCTCAGCCTGCAATGGCATCTGCTCCCAACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR TCA 90 bp AGAAGTTGGGAGCAGATGCCATTGCAGGCTGAGGCAGGGAAAGCAGGAGGGTGTAACATTGCTGACCACTaGAATGCTCACAGCATTCTG +
Preference number: 4 (lower is better)
Translates to: RSWEQMPLQAEAGKAGGCNIADH*NAHSIL
Trigger: CAGAATGCTGTGAGCATTTCAGTGGTCAGCAATGTT...ACACCCTCCTGCTTTCCCTGCCTCAGCCTGCAATGGCATCTGCTCCCAACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp GAGAGTCCCATGAGAACCAACAGTTTGGAAACAGTTTCACCTGTGAGTGACAGAACTGCCAAGGCTACCTaGTCCGCTCCGGAACCCACA +
Preference number: 4 (lower is better)
Translates to: ESPMRTNSLETVSPVSDRTAKAT*SAPEPT
Trigger: TGTGGGTTCCGGAGCGGAGCAGGTAGCCTTGGCAGT...TCTGTCACTCACAGGTGAAACTGTTTCCAAACTGTTGGTTCTCATGGGACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp CTGGTACTGCTGACCACATTTCAGATTCACCACAGGCTCTTCTCTAGGAGCGCCTCTTCTACCAGGTCTTaGATGCTCTTCAGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LVLLTTFQIHHRLFSRSASSTRS*MLFSSP
Trigger: GGGAGAGCTGAAGAGCATGCAAGACCTGGTAGAAGA...GGCGCTCCTAGAGAAGAGCCTGTGGTGAATCTGAAATGTGGTCAGCAGTACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp AGAAGTTGGGAGCAGATGCCATTGCAGGCTGAGGCAGGGAAAGCAGGAGGGTGTTCTGCAATGGATGTCTaGATGTTGGTGTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RSWEQMPLQAEAGKAGGCSAMDV*MLVFCF
Trigger: GAAGCAGAACACCAACATGCAGACATCCATTGCAGA...ACACCCTCCTGCTTTCCCTGCCTCAGCCTGCAATGGCATCTGCTCCCAACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CCA 90 bp CTGTCAGGAGAGTCCCATGAGAACCAACAGTTTGGAAACAGTTTCACCTGTGAGCTGAGCCAGAGCGTATaGTCTGCTGCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LSGESHENQQFGNSFTCELSQSV*SAAAAA
Trigger: AGCTGCTGCAGCAGCAGACCATACGCTCTGGCTCAG...CTCACAGGTGAAACTGTTTCCAAACTGTTGGTTCTCATGGGACTCTCCTGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CCA 90 bp CTGGTACTGCTGACCACATTTCAGATTCACCACAGGCTCTTCTCTAGGAGCGCCGCTGGCTTGAACTGGTaGTCTGAGAGAACTGAACAC +
Preference number: 4 (lower is better)
Translates to: LVLLTTFQIHHRLFSRSAAGLNW*SERTEH
Trigger: GTGTTCAGTTCTCTCAGACCACCAGTTCAAGCCAGC...GGCGCTCCTAGAGAAGAGCCTGTGGTGAATCTGAAATGTGGTCAGCAGTACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR TCA 90 bp CTGGTACTGCTGACCACATTTCAGATTCACCACAGGCTCTTCTCTAGGAGCGCCATGCTCACAGCATTCTaGAACTCTCCAGACAACCTG +
Preference number: 4 (lower is better)
Translates to: LVLLTTFQIHHRLFSRSAMLTAF*NSPDNL
Trigger: CAGGTTGTCTGGAGAGTTTCAGAATGCTGTGAGCAT...GGCGCTCCTAGAGAAGAGCCTGTGGTGAATCTGAAATGTGGTCAGCAGTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp GAGAGTCCCATGAGAACCAACAGTTTGGAAACAGTTTCACCTGTGAGTGACAGACACTTCCAAAGCCACTaGCACAGCTGCTACGCCCTC +
Preference number: 4 (lower is better)
Translates to: ESPMRTNSLETVSPVSDRHFQSH*HSCYAL
Trigger: GAGGGCGTAGCAGCTGTGGCAGTGGCTTTGGAAGTG...TCTGTCACTCACAGGTGAAACTGTTTCCAAACTGTTGGTTCTCATGGGACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp CTGGTACTGCTGACCACATTTCAGATTCACCACAGGCTCTTCTCTAGGAGCGCCAGAAGTGAATCTAACTaGTTGCGCAGGCAGCTGATG +
Preference number: 4 (lower is better)
Translates to: LVLLTTFQIHHRLFSRSARSESN*LRRQLM
Trigger: CATCAGCTGCCTGCGCAAGCAGTTAGATTCACTTCT...GGCGCTCCTAGAGAAGAGCCTGTGGTGAATCTGAAATGTGGTCAGCAGTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp AAAGCAGGGTTGAACTGTGCACCTGTTGATGCCAAGAAGTTGGGAGCAGATGCCTTAAAGCCCATTCTCTaGTGGCTCACGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: KAGLNCAPVDAKKLGADALKPIL*WLTEML
Trigger: CAGCATCTCCGTGAGCCAGCAGAGAATGGGCTTTAA...GGCATCTGCTCCCAACTTCTTGGCATCAACAGGTGCACAGTTCAACCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CCA 90 bp GGGTTGAACTGTGCACCTGTTGATGCCAAGAAGTTGGGAGCAGATGCCATTGCATTGATGGTCACTTCCTaGATTCCACCAGGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: GLNCAPVDAKKLGADAIALMVTS*IPPGQL
Trigger: TAGCTGCCCTGGTGGAATCCAGGAAGTGACCATCAA...TGCAATGGCATCTGCTCCCAACTTCTTGGCATCAACAGGTGCACAGTTCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CCA 90 bp CTGTCAGGAGAGTCCCATGAGAACCAACAGTTTGGAAACAGTTTCACCTGTGAGAAAGGTTCCAGGTTCTaGGGTCCTGAGCCAGAGCGT +
Preference number: 4 (lower is better)
Translates to: LSGESHENQQFGNSFTCEKGSRF*GPEPER
Trigger: ACGCTCTGGCTCAGGACCCCAGAACCTGGAACCTTT...CTCACAGGTGAAACTGTTTCCAAACTGTTGGTTCTCATGGGACTCTCCTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CCA 90 bp CTGTCAGGAGAGTCCCATGAGAACCAACAGTTTGGAAACAGTTTCACCTGTGAGGTAACTCCCCAAGCTTaGTCTGGTACAGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LSGESHENQQFGNSFTCEVTPQA*SGTGPQ
Trigger: CTGAGGCCCTGTACCAGACCAAGCTTGGGGAGTTAC...CTCACAGGTGAAACTGTTTCCAAACTGTTGGTTCTCATGGGACTCTCCTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR TCA 90 bp GAGAGTCCCATGAGAACCAACAGTTTGGAAACAGTTTCACCTGTGAGTGACAGACCTGGCTCCCACAACTaGAGGATTTCTTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ESPMRTNSLETVSPVSDRPGSHN*RISCRL
Trigger: AAGCCTGCAAGAAATCCTTCAGTTGTGGGAGCCAGG...TCTGTCACTCACAGGTGAAACTGTTTCCAAACTGTTGGTTCTCATGGGACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR TCA 90 bp AAAGCAGGGTTGAACTGTGCACCTGTTGATGCCAAGAAGTTGGGAGCAGATGCCGAGTCCTCAGAAAGTTaGTTTCATCTGTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: KAGLNCAPVDAKKLGADAESSES*FHLSDC
Trigger: ACAGTCTGACAGATGAAATCAACTTTCTGAGGACTC...GGCATCTGCTCCCAACTTCTTGGCATCAACAGGTGCACAGTTCAACCCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp ACCAACAGTTTGGAAACAGTTTCACCTGTGAGTGACAGATGGACAGAATGGACTCTACCAGGTCTTGCATaGTCTTCAGCTCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: TNSLETVSPVSDRWTEWTLPGLA*SSALPP
Trigger: TGGAGGGAGAGCTGAAGAGCATGCAAGACCTGGTAG...AGTCCATTCTGTCCATCTGTCACTCACAGGTGAAACTGTTTCCAAACTGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR TCA 90 bp CTGGTACTGCTGACCACATTTCAGATTCACCACAGGCTCTTCTCTAGGAGCGCCCTTCATACTTCTTTTTaGAGTCTTCTACCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LVLLTTFQIHHRLFSRSALHTSF*SLLPGL
Trigger: AAGACCTGGTAGAAGACTTCAAAAAGAAGTATGAAG...GGCGCTCCTAGAGAAGAGCCTGTGGTGAATCTGAAATGTGGTCAGCAGTACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR GCA 90 bp GAGAGTCCCATGAGAACCAACAGTTTGGAAACAGTTTCACCTGTGAGTGACAGATGCATGTTGGTGTTCTaGTTCTTGACATTCTCAATC +
Preference number: 4 (lower is better)
Translates to: ESPMRTNSLETVSPVSDRCMLVF*FLTFSI
Trigger: GATTGAGAATGTCAAGAAGCAGAACACCAACATGCA...TCTGTCACTCACAGGTGAAACTGTTTCCAAACTGTTGGTTCTCATGGGACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS GCA 90 bp TGCCTCCACTGCCAAGTCTGCTCCCACTGCTGCCTCTGCTGCTGCTaGCTCTGCTGCTGCTGCTGCTGCTGCCGCCGCTTCTGCCACTGC +
Preference number: 5 (lower is better)
Translates to: CLHCQVCSHCCLCCC*LCCCCCCCRRFCHC
Trigger: GCAGTGGCAGAAGCGGCGGCAGCAGCAGCAGCAGCAGCAGAGGCAGCAGCAGCAGAGGCAGCAGTGGGAGCAGACTTGGCAGTGGAGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS GCA 90 bp TGCTGCCTCCACTGCCAAGTCTGCTCCCACTGCTGCCTCTGCTGCTaGTGCCTCTGCTGCTGCTGCTGCTGCTGCCGCCGCTTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: CCLHCQVCSHCCLCC*CLCCCCCCCRRFCH
Trigger: GTGGCAGAAGCGGCGGCAGCAGCAGCAGCAGCAGCAGAGGCAGCAGCAGCAGAGGCAGCAGTGGGAGCAGACTTGGCAGTGGAGGCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS GCA 90 bp GGCTCACGGAGATGCTGCCTCCACTGCCAAGTCTGCTCCCACTGCTaGCTCTGCTGCTGCTGCCTCTGCTGCTGCTGCTGCTGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: GSRRCCLHCQVCSHC*LCCCCLCCCCCCCR
Trigger: GCGGCAGCAGCAGCAGCAGCAGCAGAGGCAGCAGCAGCAGAGGCAGCAGTGGGAGCAGACTTGGCAGTGGAGGCAGCATCTCCGTGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS GCA 90 bp GCTGGCTCACGGAGATGCTGCCTCCACTGCCAAGTCTGCTCCCACTaGTGCCTCTGCTGCTGCTGCCTCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: AGSRRCCLHCQVCSH*CLCCCCLCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGAGGCAGCAGCAGCAGAGGCAGCAGTGGGAGCAGACTTGGCAGTGGAGGCAGCATCTCCGTGAGCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS GCA 90 bp CACTGCTGCCTCTGCTGCTGCTGCCTCTGCTGCTGCTGCTGCTGCTaGCGCCGCTTCTGCCACTGCTATCCCCTCCGTAGTTACTGCCAC +
Preference number: 5 (lower is better)
Translates to: HCCLCCCCLCCCCCC*RRFCHCYPLRSYCH
Trigger: GTGGCAGTAACTACGGAGGGGATAGCAGTGGCAGAAGCGGCGGCAGCAGCAGCAGCAGCAGCAGAGGCAGCAGCAGCAGAGGCAGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS GCA 90 bp CCATTCTCTGCTGGCTCACGGAGATGCTGCCTCCACTGCCAAGTCTaGTCCCACTGCTGCCTCTGCTGCTGCTGCCTCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PFSAGSRRCCLHCQV*SHCCLCCCCLCCCC
Trigger: GCAGCAGCAGCAGAGGCAGCAGCAGCAGAGGCAGCAGTGGGAGCAGACTTGGCAGTGGAGGCAGCATCTCCGTGAGCCAGCAGAGAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS GCA 90 bp CTGCCTACTGAGGTCTGGCTGCCACCAGAGTTAAAGCCCATTCTCTaGTGGCTCACGGAGATGCTGCCTCCACTGCCAAGTCTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: LPTEVWLPPELKPIL*WLTEMLPPLPSLLP
Trigger: TGGGAGCAGACTTGGCAGTGGAGGCAGCATCTCCGTGAGCCAGCAGAGAATGGGCTTTAACTCTGGTGGCAGCCAGACCTCAGTAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS CCA 90 bp CCTACTGAGGTCTGGCTGCCACCAGAGTTAAAGCCCATTCTCTGCTaGCTCACGGAGATGCTGCCTCCACTGCCAAGTCTGCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: PTEVWLPPELKPILC*LTEMLPPLPSLLPL
Trigger: CAGTGGGAGCAGACTTGGCAGTGGAGGCAGCATCTCCGTGAGCCAGCAGAGAATGGGCTTTAACTCTGGTGGCAGCCAGACCTCAGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CAA 90 bp CATTGCAGGCTGAGGCAGGGAAAGCAGGAGGGTGTGGATGCTTTGCCCCTGAAGTGTAACTCCCCAAGCTaGGTCTGGTACAGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: HCRLRQGKQEGVDALPLKCNSPS*VWYRAS
Trigger: TGAGGCCCTGTACCAGACCAAGCTTGGGGAGTTACA...CTTCAGGGGCAAAGCATCCACACCCTCCTGCTTTCCCTGCCTCAGCCTGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS GCA 90 bp TTGAACTGGTGGTCTGAGAGAACTGAACACTGCTGCTGCCTCCTCTaGCAGACTTGTAGCTGCTGCCTACTGAGGTCTGGCTGCCACCAG +
Preference number: 5 (lower is better)
Translates to: LNWWSERTEHCCCLL*QTCSCCLLRSGCHQ
Trigger: CTGGTGGCAGCCAGACCTCAGTAGGCAGCAGCTACAAGTCTGGCAGAGGAGGCAGCAGCAGTGTTCAGTTCTCTCAGACCACCAGTTCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS GCA 90 bp AGCGTTGCTGGCTTGAACTGGTGGTCTGAGAGAACTGAACACTGCTaGTGCCTCCTCTGCCAGACTTGTAGCTGCTGCCTACTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: SVAGLNWWSERTEHC*CLLCQTCSCCLLRS
Trigger: AGACCTCAGTAGGCAGCAGCTACAAGTCTGGCAGAGGAGGCAGCAGCAGTGTTCAGTTCTCTCAGACCACCAGTTCAAGCCAGCAACGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CAA 90 bp GGGAGCAGATGCCATTGCAGGCTGAGGCAGGGAAAGCAGGAGGGTGTGGATGCTTTGGTGTTCTGCTTCTaGACATTCTCAATCTCCGCT +
Preference number: 5 (lower is better)
Translates to: GSRCHCRLRQGKQEGVDALVFCF*TFSISA
Trigger: AGCGGAGATTGAGAATGTCAAGAAGCAGAACACCAA...AGCATCCACACCCTCCTGCTTTCCCTGCCTCAGCCTGCAATGGCATCTGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS TCA 90 bp TCTGCAGAGCAACCTGCAAGTCTTGGAATTTGGTATCTGCATCCTTaGGGGCCCGCTCACCACGCTGTTCAGCCTCTGCAATGGATGTCT +
Preference number: 5 (lower is better)
Translates to: SAEQPASLGIWYLHP*GPAHHAVQPLQWMS
Trigger: AGACATCCATTGCAGAGGCTGAACAGCGTGGTGAGCGGGCCCTCAAGGATGCAGATACCAAATTCCAAGACTTGCAGGTTGCTCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CAA 90 bp CATTGCAGGCTGAGGCAGGGAAAGCAGGAGGGTGTGGATGCTTTGCCCCTGAAGAGAGTCCTCAGAAAGTaGATTTCATCTGTCAGACTG +
Preference number: 5 (lower is better)
Translates to: HCRLRQGKQEGVDALPLKRVLRK*ISSVRL
Trigger: CAGTCTGACAGATGAAATCAACTTTCTGAGGACTCT...CTTCAGGGGCAAAGCATCCACACCCTCCTGCTTTCCCTGCCTCAGCCTGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CAA 90 bp GAGAGTCCCATGAGAACCAACAGTTTGGAAACAGTTTCACCTGTGAGTGACAGATTGGTATCTGCATCCTaGAGGGCCCGCTCACCACGC +
Preference number: 5 (lower is better)
Translates to: ESPMRTNSLETVSPVSDRLVSAS*RARSPR
Trigger: GCGTGGTGAGCGGGCCCTCAAGGATGCAGATACCAA...TCTGTCACTCACAGGTGAAACTGTTTCCAAACTGTTGGTTCTCATGGGACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS TCA 90 bp TCTGAAGCTTCCGCTGCTGCTTGTGCTGGTAACATTGCTGACCACTaGAATGCTCACAGCATTCTGAAACTCTCCAGACAACCTGCACTC +
Preference number: 5 (lower is better)
Translates to: SEASAAACAGNIADH*NAHSILKLSRQPAL
Trigger: GAGTGCAGGTTGTCTGGAGAGTTTCAGAATGCTGTGAGCATTTCAGTGGTCAGCAATGTTACCAGCACAAGCAGCAGCGGAAGCTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CAA 90 bp AAAGCAGGGTTGAACTGTGCACCTGTTGATGCCAAGAAGTTGGGAGCAGATGCCCTTGTGCTGGTAACATaGCTGACCACTGAAATGCTC +
Preference number: 5 (lower is better)
Translates to: KAGLNCAPVDAKKLGADALVLVT*LTTEML
Trigger: GAGCATTTCAGTGGTCAGCAATGTTACCAGCACAAG...GGCATCTGCTCCCAACTTCTTGGCATCAACAGGTGCACAGTTCAACCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CAA 90 bp GAGAGTCCCATGAGAACCAACAGTTTGGAAACAGTTTCACCTGTGAGTGACAGATGGAGCGTTGCTGGCTaGAACTGGTGGTCTGAGAGA +
Preference number: 5 (lower is better)
Translates to: ESPMRTNSLETVSPVSDRWSVAG*NWWSER
Trigger: TCTCTCAGACCACCAGTTCAAGCCAGCAACGCTCCA...TCTGTCACTCACAGGTGAAACTGTTTCCAAACTGTTGGTTCTCATGGGACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CAA 90 bp GAGAGTCCCATGAGAACCAACAGTTTGGAAACAGTTTCACCTGTGAGTGACAGAGTCTTCTACCAGGTCTaGCATGCTCTTCAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: ESPMRTNSLETVSPVSDRVFYQV*HALQLS
Trigger: GGAGAGCTGAAGAGCATGCAAGACCTGGTAGAAGAC...TCTGTCACTCACAGGTGAAACTGTTTCCAAACTGTTGGTTCTCATGGGACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CAA 90 bp GGGTTGAACTGTGCACCTGTTGATGCCAAGAAGTTGGGAGCAGATGCCATTGCAATGGATGTCTGCATGTaGGTGTTCTGCTTCTTGACA +
Preference number: 5 (lower is better)
Translates to: GLNCAPVDAKKLGADAIAMDVCM*VFCFLT
Trigger: TGTCAAGAAGCAGAACACCAACATGCAGACATCCAT...TGCAATGGCATCTGCTCCCAACTTCTTGGCATCAACAGGTGCACAGTTCAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS-3UTR CAA 90 bp AAAGCAGGGTTGAACTGTGCACCTGTTGATGCCAAGAAGTTGGGAGCAGATGCCTCTTCATACTTCTTTTaGAAGTCTTCTACCAGGTCT +
Preference number: 5 (lower is better)
Translates to: KAGLNCAPVDAKKLGADASSYFF*KSSTRS
Trigger: AGACCTGGTAGAAGACTTCAAAAAGAAGTATGAAGA...GGCATCTGCTCCCAACTTCTTGGCATCAACAGGTGCACAGTTCAACCCTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS GCA 72 bp GTCTGCTCCCACTGCTGCCTCTGCTGCTGCTGCCTCTaGTGCTGCTGCTGCTGCTGCCGCCGCTTCTGCCAC +
Preference number: 6 (lower is better)
Translates to: VCSHCCLCCCCL*CCCCCCRRFCH
Trigger: GTGGCAGAAGCGGCGGCAGCAGCAGCAGCAGCAGCAGAGGCAGCAGCAGCAGAGGCAGCAGTGGGAGCAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGCCGCCGCTTCTGCCACTaGTATCCCCTCCGTAGTTACTGCCACCGGTCCCTC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCRRFCH*YPLRSYCHRSL
Trigger: GAGGGACCGGTGGCAGTAACTACGGAGGGGATAGCAGTGGCAGAAGCGGCGGCAGCAGCAGCAGCAGCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS GCA 72 bp CTCTGCTGCTGCTGCCTCTGCTGCTGCTGCTGCTGCTaGCGCCGCTTCTGCCACTGCTATCCCCTCCGTAGT +
Preference number: 6 (lower is better)
Translates to: LCCCCLCCCCCC*RRFCHCYPLRS
Trigger: ACTACGGAGGGGATAGCAGTGGCAGAAGCGGCGGCAGCAGCAGCAGCAGCAGCAGAGGCAGCAGCAGCAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS GCA 72 bp GCTGGCTCACGGAGATGCTGCCTCCACTGCCAAGTCTaGTCCCACTGCTGCCTCTGCTGCTGCTGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: AGSRRCCLHCQV*SHCCLCCCCLC
Trigger: GCAGAGGCAGCAGCAGCAGAGGCAGCAGTGGGAGCAGACTTGGCAGTGGAGGCAGCATCTCCGTGAGCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS GCA 72 bp GAGGTCTGGCTGCCACCAGAGTTAAAGCCCATTCTCTaGTGGCTCACGGAGATGCTGCCTCCACTGCCAAGT +
Preference number: 6 (lower is better)
Translates to: EVWLPPELKPIL*WLTEMLPPLPS
Trigger: ACTTGGCAGTGGAGGCAGCATCTCCGTGAGCCAGCAGAGAATGGGCTTTAACTCTGGTGGCAGCCAGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS GCA 72 bp GGCTTGAACTGGTGGTCTGAGAGAACTGAACACTGCTaGTGCCTCCTCTGCCAGACTTGTAGCTGCTGCCTA +
Preference number: 6 (lower is better)
Translates to: GLNWWSERTEHC*CLLCQTCSCCL
Trigger: TAGGCAGCAGCTACAAGTCTGGCAGAGGAGGCAGCAGCAGTGTTCAGTTCTCTCAGACCACCAGTTCAAGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS CAA 72 bp GCAACCTGCAAGTCTTGGAATTTGGTATCTGCATCCTaGAGGGCCCGCTCACCACGCTGTTCAGCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: ATCKSWNLVSAS*RARSPRCSASA
Trigger: TGCAGAGGCTGAACAGCGTGGTGAGCGGGCCCTCAAGGATGCAGATACCAAATTCCAAGACTTGCAGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS CAA 90 bp TTCTGCAGAGCAACCTGCAAGTCTTGGAATTTGGTATCTGCATCCTaGAGGGCCCGCTCACCACGCTGTTCAGCCTCTGCAATGGATGTC +
Preference number: 6 (lower is better)
Translates to: FCRATCKSWNLVSAS*RARSPRCSASAMDV
Trigger: GACATCCATTGCAGAGGCTGAACAGCGTGGTGAGCGGGCCCTCAAGGATGCAGATACCAAATTCCAAGACTTGCAGGTTGCTCTGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2
CDS TCA 72 bp GTAACATTGCTGACCACTGAAATGCTCACAGCATTCTaGAACTCTCCAGACAACCTGCACTCCTCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: VTLLTTEMLTAF*NSPDNLHSSPS
Trigger: GGAGGGCGAGGAGTGCAGGTTGTCTGGAGAGTTTCAGAATGCTGTGAGCATTTCAGTGGTCAGCAATGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100179.2