Pregenerated sensors for KRT75 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022986Ensembl transcript IDs: ENSMUST00000042957.6
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGAGGGTATAGCCTCACCCTGCATGACATACAGAGCAGGAGGCTaGGCAGGGCTCTGCCCAGGGGTTGGGACTTCCCAAACAAGCATT | + |
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Preference number: 1 (lower is better) Translates to: GEGIASPCMTYRAGG*AGLCPGVGTSQTSI Trigger: AATGCTTGTTTGGGAAGTCCCAACCCCTGGGCAGAGCCCTGCCCAGCCTCCTGCTCTGTATGTCATGCAGGGTGAGGCTATACCCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR GCA 90 bp | GCCTCACCCTGCATGACATACAGAGCAGGAGGCTGGGCAGGGCTCTaGCCAGGGGTTGGGACTTCCCAAACAAGCATTCCAAAGAGTTGG | + |
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Preference number: 1 (lower is better) Translates to: ASPCMTYRAGGWAGL*PGVGTSQTSIPKSW Trigger: CCAACTCTTTGGAATGCTTGTTTGGGAAGTCCCAACCCCTGGGCAGAGCCCTGCCCAGCCTCCTGCTCTGTATGTCATGCAGGGTGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR CCA 90 bp | ACCACCCATCTTACGTCAGCGCTGTCCCAGGAACACAGGCTGATTTaGGGAGGGTATAGCCTCACCCTGCATGACATACAGAGCAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: TTHLTSALSQEHRLI*GGYSLTLHDIQSRR Trigger: CCTCCTGCTCTGTATGTCATGCAGGGTGAGGCTATACCCTCCCCAAATCAGCCTGTGTTCCTGGGACAGCGCTGACGTAAGATGGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR GCA 90 bp | CATAGGCCAGGGAATGGGTTTAGCCAGGATACCAGGATCCCTGGCTaGTGGGAAGGGTGCTATTGTGAAGAGGATATGAGAGATGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: HRPGNGFSQDTRIPG*WEGCYCEEDMRDGP Trigger: GGGCCCATCTCTCATATCCTCTTCACAATAGCACCCTTCCCAGCAGCCAGGGATCCTGGTATCCTGGCTAAACCCATTCCCTGGCCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR TCA 90 bp | TCACATGGCCAGGGAATCCTGGAGACAACACTAGAACCCAGTGTCTaGTTGGGCTGTGTGCCCAGAATCCCTGTGCTTCACATAGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: SHGQGILETTLEPSV*LGCVPRIPVLHIAG Trigger: CCCTGCTATGTGAAGCACAGGGATTCTGGGCACACAGCCCAATCAGACACTGGGTTCTAGTGTTGTCTCCAGGATTCCCTGGCCATGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR TCA 90 bp | CTGGGGGTGTTTGCAGATGCCATGCCCTGGCAGATCCATTTATTGTaGACTTTGGAGGGACATGAGCTTTGGGTCTGTGTGTCTAGCACA | + |
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Preference number: 1 (lower is better) Translates to: LGVFADAMPWQIHLL*TLEGHELWVCVSST Trigger: TGTGCTAGACACACAGACCCAAAGCTCATGTCCCTCCAAAGTTCACAATAAATGGATCTGCCAGGGCATGGCATCTGCAAACACCCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR TCA 90 bp | CCCTGTCTTGCAATTATGGGCTCATTTGCTCCTTGGCCTCCGGGCTaGCTTTTAACTCCTCTCCTGCTCTGTTATTTCTCTGCTCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: PCLAIMGSFAPWPPG*LLTPLLLCYFSAQV Trigger: GACCTGAGCAGAGAAATAACAGAGCAGGAGAGGAGTTAAAAGTCAGCCCGGAGGCCAAGGAGCAAATGAGCCCATAATTGCAAGACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR TCA 90 bp | AACTCCTCTCCTGCTCTGTTATTTCTCTGCTCAGGTCTACAAGTTTaGAGCTGTCAGGGAACAATCGGCTCCTTTGCTGGCCAGTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: NSSPALLFLCSGLQV*SCQGTIGSFAGQCL Trigger: AAGGCACTGGCCAGCAAAGGAGCCGATTGTTCCCTGACAGCTTCAAACTTGTAGACCTGAGCAGAGAAATAACAGAGCAGGAGAGGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR CCA 90 bp | ACTCCTATGATAGAACTCCTTTCTGAGCGTGGGTGGTTTTCTGATTaGCAGCTCCTATCAGTAATCCTATGTGACAAGCCCACCCTGACC | + |
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Preference number: 1 (lower is better) Translates to: TPMIELLSERGWFSD*QLLSVILCDKPTLT Trigger: GGTCAGGGTGGGCTTGTCACATAGGATTACTGATAGGAGCTGCCAATCAGAAAACCACCCACGCTCAGAAAGGAGTTCTATCATAGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR CCA 90 bp | ACAAACTCTAACAGTTTACCTTCCAACATTGGATGTTTTTGCCCTTaGTTTCTTCCTGCAACCATTGTCACACAGGTCACATGGCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: TNSNSLPSNIGCFCP*FLPATIVTQVTWPG Trigger: CCCTGGCCATGTGACCTGTGTGACAATGGTTGCAGGAAGAAACCAAGGGCAAAAACATCCAATGTTGGAAGGTAAACTGTTAGAGTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR GCA 90 bp | TGGGAGACAAACTCTAACAGTTTACCTTCCAACATTGGATGTTTTTaGCCTTGGTTTCTTCCTGCAACCATTGTCACACAGGTCACATGG | + |
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Preference number: 1 (lower is better) Translates to: WETNSNSLPSNIGCF*PWFLPATIVTQVTW Trigger: CCATGTGACCTGTGTGACAATGGTTGCAGGAAGAAACCAAGGGCAAAAACATCCAATGTTGGAAGGTAAACTGTTAGAGTTTGTCTCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR GCA 90 bp | CAGGTCACATGGCCAGGGAATCCTGGAGACAACACTAGAACCCAGTGTCTGATTGGCTGGGCAGGGCTCTaGCCAGGGGTTGGGACTTCC | + |
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Preference number: 2 (lower is better) Translates to: QVTWPGNPGDNTRTQCLIGWAGL*PGVGTS Trigger: GGAAGTCCCAACCCCTGGGCAGAGCCCTGCCCAGCC...AATCAGACACTGGGTTCTAGTGTTGTCTCCAGGATTCCCTGGCCATGTGACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR CCA 90 bp | TTGACCACCCATCTTACGTCAGCGCTGTCCCAGGAACACAGGCTGATTTGGGGACCCCTCCAGCTCCTCTaGAAGGGGCAAGAGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LTTHLTSALSQEHRLIWGPLQLL*KGQELL Trigger: CAGCAGCTCTTGCCCCTTCCAGAGGAGCTGGAGGGG...TCCCCAAATCAGCCTGTGTTCCTGGGACAGCGCTGACGTAAGATGGGTGGTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR GCA 90 bp | AGCTGTCAGGGAACAATCGGCTCCTTTGCTGGCCAGTGCCTTGACCACCCATCTCACGGACTCCTCCATTaGTGCACCTGGAGGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: SCQGTIGSFAGQCLDHPSHGLLH*CTWRKG Trigger: CCCTTTCCTCCAGGTGCAGCAATGGAGGAGTCCGTG...AGATGGGTGGTCAAGGCACTGGCCAGCAAAGGAGCCGATTGTTCCCTGACAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR CCA 90 bp | TTTGGGGAGGGTATAGCCTCACCCTGCATGACATACAGAGCAGGAGGCTGGGCAGGATACCAGGATCCCTaGCTGCTGGGAAGGGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: FGEGIASPCMTYRAGGWAGYQDP*LLGRVL Trigger: TAGCACCCTTCCCAGCAGCCAGGGATCCTGGTATCC...TGCCCAGCCTCCTGCTCTGTATGTCATGCAGGGTGAGGCTATACCCTCCCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR CAA 90 bp | GCTCTGCCCAGGGGTTGGGACTTCCCAAACAAGCATTCCAAAGAGTaGGAGCCGCTAGAGGAGGAAGACTATTGGTCTGCTGCCCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: ALPRGWDFPNKHSKE*EPLEEEDYWSAALP Trigger: GGGAAGGGCAGCAGACCAATAGTCTTCCTCCTCTAGCGGCTCCAACTCTTTGGAATGCTTGTTTGGGAAGTCCCAACCCCTGGGCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR CAA 90 bp | TTTGAAGCTGTCAGGGAACAATCGGCTCCTTTGCTGGCCAGTGCCTaGACCACCCATCTTACGTCAGCGCTGTCCCAGGAACACAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: FEAVREQSAPLLASA*TTHLTSALSQEHRL Trigger: CAGCCTGTGTTCCTGGGACAGCGCTGACGTAAGATGGGTGGTCAAGGCACTGGCCAGCAAAGGAGCCGATTGTTCCCTGACAGCTTCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR GCA 90 bp | CGGAGTTGCTCCAGGCTCATCAGCACTGCACACAGAGGACTGAGCCAAACACATGGACTCCTCCATTGCTaGACCTGGAGGAAAGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: RSCSRLISTAHRGLSQTHGLLHC*TWRKGA Trigger: TGCCCCTTTCCTCCAGGTGCAGCAATGGAGGAGTCC...ATGTGTTTGGCTCAGTCCTCTGTGTGCAGTGCTGATGAGCCTGGAGCAACTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR GCA 90 bp | CTTGACCACCCATCTTACGTCAGCGCTGTCCCAGGAACACAGGCTGATTTGGGGAACACTGGCTGGGGCTaGCTGAAAGTCGGAGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LDHPSYVSAVPGTQADLGNTGWG*LKVGVA Trigger: AGCAACTCCGACTTTCAGGCAGCCCCAGCCAGTGTT...CCCCAAATCAGCCTGTGTTCCTGGGACAGCGCTGACGTAAGATGGGTGGTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR CAA 90 bp | GCTCAGGTCTACAAGTTTGAAGCTGTCAGGGAACAATCGGCTCCTTaGCTGGCCAGTGCCTTGACCACCCATCTTACGTCAGCGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: AQVYKFEAVREQSAP*LASALTTHLTSALS Trigger: GGACAGCGCTGACGTAAGATGGGTGGTCAAGGCACTGGCCAGCAAAGGAGCCGATTGTTCCCTGACAGCTTCAAACTTGTAGACCTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR TCA 90 bp | TTTGGGGAGGGTATAGCCTCACCCTGCATGACATACAGAGCAGGAGGCTGGGCAATTGTGAAGAGGATATaGGAGATGGGCCCCAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: FGEGIASPCMTYRAGGWAIVKRI*EMGPRH Trigger: ATGCCTGGGGCCCATCTCTCATATCCTCTTCACAAT...TGCCCAGCCTCCTGCTCTGTATGTCATGCAGGGTGAGGCTATACCCTCCCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR CCA 90 bp | TTTGGGGAGGGTATAGCCTCACCCTGCATGACATACAGAGCAGGAGGCTGGGCAGAGGGACATGAGCTTTaGGTCTGTGTGTCTAGCACA | + |
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Preference number: 2 (lower is better) Translates to: FGEGIASPCMTYRAGGWAEGHEL*VCVSST Trigger: TGTGCTAGACACACAGACCCAAAGCTCATGTCCCTC...TGCCCAGCCTCCTGCTCTGTATGTCATGCAGGGTGAGGCTATACCCTCCCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGTTTTCTGATTGGCAGCTCCTATCAGTAATCCTATGTGACAAGCCCACCCTCCATTGCTGCACCTaGAGGAAAGGGGCAGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: GWFSDWQLLSVILCDKPTLHCCT*RKGAGG Trigger: ACCACCTGCCCCTTTCCTCCAGGTGCAGCAATGGAG...GGTGGGCTTGTCACATAGGATTACTGATAGGAGCTGCCAATCAGAAAACCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCCATTGCTGCACCTGGAGGAAAGGGGCAGGTGGTACTGAAGGGGCATTTCAGATCCATTTATTGTaGACTTTGGAGGGACATGAG | + |
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Preference number: 2 (lower is better) Translates to: LLHCCTWRKGAGGTEGAFQIHLL*TLEGHE Trigger: CTCATGTCCCTCCAAAGTTCACAATAAATGGATCTG...AAATGCCCCTTCAGTACCACCTGCCCCTTTCCTCCAGGTGCAGCAATGGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR GCA 90 bp | GATGTTTTTGCCCTTGGTTTCTTCCTGCAACCATTGTCACACAGGTCACATGGCACCAGGATCCCTGGCTaGTGGGAAGGGTGCTATTGT | + |
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Preference number: 2 (lower is better) Translates to: DVFALGFFLQPLSHRSHGTRIPG*WEGCYC Trigger: ACAATAGCACCCTTCCCAGCAGCCAGGGATCCTGGT...GCCATGTGACCTGTGTGACAATGGTTGCAGGAAGAAACCAAGGGCAAAAACATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR GCA 90 bp | TTTGGGGAGGGTATAGCCTCACCCTGCATGACATACAGAGCAGGAGGCTGGGCACTGTGCCTTGAGTACTaGTTGTATGGAATAACACTG | + |
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Preference number: 2 (lower is better) Translates to: FGEGIASPCMTYRAGGWALCLEY*LYGITL Trigger: CAGTGTTATTCCATACAAGCAGTACTCAAGGCACAG...TGCCCAGCCTCCTGCTCTGTATGTCATGCAGGGTGAGGCTATACCCTCCCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR GCA 90 bp | CAGGTCACATGGCCAGGGAATCCTGGAGACAACACTAGAACCCAGTGTCTGATTGGTATAGCCTCACCCTaGATGACATACAGAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QVTWPGNPGDNTRTQCLIGIASP*MTYRAG Trigger: TCCTGCTCTGTATGTCATGCAGGGTGAGGCTATACC...AATCAGACACTGGGTTCTAGTGTTGTCTCCAGGATTCCCTGGCCATGTGACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR CAA 90 bp | TTCCTGGGTGTCTCCCTGTCTTGCAATTATGGGCTCATTTGCTCCTaGGCCTCCGGGCTGACTTTTAACTCCTCTCCTGCTCTGTTATTT | + |
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Preference number: 2 (lower is better) Translates to: FLGVSLSCNYGLICS*ASGLTFNSSPALLF Trigger: AAATAACAGAGCAGGAGAGGAGTTAAAAGTCAGCCCGGAGGCCAAGGAGCAAATGAGCCCATAATTGCAAGACAGGGAGACACCCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR CCA 90 bp | TCCGGGCTGACTTTTAACTCCTCTCCTGCTCTGTTATTTCTCTGCTCAGGTCTAGAACACAGGCTGATTTaGGGAGGGTATAGCCTCACC | + |
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Preference number: 2 (lower is better) Translates to: SGLTFNSSPALLFLCSGLEHRLI*GGYSLT Trigger: GGTGAGGCTATACCCTCCCCAAATCAGCCTGTGTTC...TAGACCTGAGCAGAGAAATAACAGAGCAGGAGAGGAGTTAAAAGTCAGCCCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGTCACATGGCCAGGGAATCCTGGAGACAACACTAGAACCCAGTGTCTGATTCCTGTCTTGCAATTATaGGCTCATTTGCTCCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: QVTWPGNPGDNTRTQCLIPVLQL*AHLLLG Trigger: GCCAAGGAGCAAATGAGCCCATAATTGCAAGACAGG...AATCAGACACTGGGTTCTAGTGTTGTCTCCAGGATTCCCTGGCCATGTGACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR TCA 90 bp | GATGTTTTTGCCCTTGGTTTCTTCCTGCAACCATTGTCACACAGGTCACATGGCACTGAGCCAAACACATaGCACATGCATTTAATAGGC | + |
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Preference number: 2 (lower is better) Translates to: DVFALGFFLQPLSHRSHGTEPNT*HMHLIG Trigger: GCCTATTAAATGCATGTGTCATGTGTTTGGCTCAGT...GCCATGTGACCTGTGTGACAATGGTTGCAGGAAGAAACCAAGGGCAAAAACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR GCA 90 bp | CAGTATCATGGGAGACAAACTCTAACAGTTTACCTTCCAACATTGGATGTTTTTATGTCTGGGGGTGTTTaGAGATGCCATGCCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: QYHGRQTLTVYLPTLDVFMSGGV*RCHALA Trigger: TGCCAGGGCATGGCATCTGCAAACACCCCCAGACAT...AAAAACATCCAATGTTGGAAGGTAAACTGTTAGAGTTTGTCTCCCATGATACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR CCA 90 bp | GTGAATTTGGCAATTATTTGCACAGTTTTTCCTGTCTACTCTGAAACTGTTACCTGGAATAACACTGGCTaGGGCTGCCTGAAAGTCGGA | + |
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Preference number: 2 (lower is better) Translates to: VNLAIICTVFPVYSETVTWNNTG*GCLKVG Trigger: TCCGACTTTCAGGCAGCCCCAGCCAGTGTTATTCCA...GGTAACAGTTTCAGAGTAGACAGGAAAAACTGTGCAAATAATTGCCAAATTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR CCA 90 bp | CAGTATCATGGGAGACAAACTCTAACAGTTTACCTTCCAACATTGGATGTTTTTGGGTGGTTTTCTGATTaGCAGCTCCTATCAGTAATC | + |
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Preference number: 2 (lower is better) Translates to: QYHGRQTLTVYLPTLDVFGWFSD*QLLSVI Trigger: GATTACTGATAGGAGCTGCCAATCAGAAAACCACCC...AAAAACATCCAATGTTGGAAGGTAAACTGTTAGAGTTTGTCTCCCATGATACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR CCA 72 bp | TGGCCTGGGAGACACGGACTCCTCCATTGCTGCACCTaGAGGAAAGGGGCAGGTGGTACTGAAGGGGCATTT | + |
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Preference number: 3 (lower is better) Translates to: WPGRHGLLHCCT*RKGAGGTEGAF Trigger: AAATGCCCCTTCAGTACCACCTGCCCCTTTCCTCCAGGTGCAGCAATGGAGGAGTCCGTGTCTCCCAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR GCA 72 bp | AGAAGTACCAGGAGCAGCCTAGGGCTGTCAGGAGGCTaGCATAGGCCAGGGAATGGGTTTAGCCAGGATACC | + |
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Preference number: 3 (lower is better) Translates to: RSTRSSLGLSGG*HRPGNGFSQDT Trigger: GGTATCCTGGCTAAACCCATTCCCTGGCCTATGGCAGCCTCCTGACAGCCCTAGGCTGCTCCTGGTACTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR GCA 72 bp | AGCTGTCAGGGAACAATCGGCTCCTTTGCTGGCCAGTaGCTTGACCACCCATCTTACGTCAGCGCTGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: SCQGTIGSFAGQ*LDHPSYVSAVP Trigger: TGGGACAGCGCTGACGTAAGATGGGTGGTCAAGGCACTGGCCAGCAAAGGAGCCGATTGTTCCCTGACAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR TCA 72 bp | TACCAGGATCCCTGGCTGCTGGGAAGGGTGCTATTGTaGAGAGGATATGAGAGATGGGCCCCAGGCATCCAG | + |
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Preference number: 3 (lower is better) Translates to: YQDPWLLGRVLL*RGYERWAPGIQ Trigger: CTGGATGCCTGGGGCCCATCTCTCATATCCTCTTCACAATAGCACCCTTCCCAGCAGCCAGGGATCCTGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR TCA 72 bp | CCCATCTTACGTCAGCGCTGTCCCAGGAACACAGGCTaGTTTGGGGAGGGTATAGCCTCACCCTGCATGACA | + |
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Preference number: 3 (lower is better) Translates to: PILRQRCPRNTG*FGEGIASPCMT Trigger: TGTCATGCAGGGTGAGGCTATACCCTCCCCAAATCAGCCTGTGTTCCTGGGACAGCGCTGACGTAAGATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGCTCAGGTCTACAAGTTTGAAGCTGTCAGGGAACAATCGGCTCCTTTGCACACGGACTCCTCCATaGCTGCACCTGGAGGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: SLLRSTSLKLSGNNRLLCTRTPP*LHLEER Trigger: CCTTTCCTCCAGGTGCAGCAATGGAGGAGTCCGTGT...GCAAAGGAGCCGATTGTTCCCTGACAGCTTCAAACTTGTAGACCTGAGCAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR CAA 90 bp | TTTTCTGATTGGCAGCTCCTATCAGTAATCCTATGTGACAAGCCCACCCTGACCGGCTCTGCCCAGGGGTaGGGACTTCCCAAACAAGCA | + |
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Preference number: 3 (lower is better) Translates to: FSDWQLLSVILCDKPTLTGSAQG*GLPKQA Trigger: TGCTTGTTTGGGAAGTCCCAACCCCTGGGCAGAGCC...GGTCAGGGTGGGCTTGTCACATAGGATTACTGATAGGAGCTGCCAATCAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR GCA 72 bp | CTGGGTGTCTCCCTGTCTTGCAATTATGGGCTCATTTaGTCCTTGGCCTCCGGGCTGACTTTTAACTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: LGVSLSCNYGLI*SLASGLTFNSS Trigger: AGAGGAGTTAAAAGTCAGCCCGGAGGCCAAGGAGCAAATGAGCCCATAATTGCAAGACAGGGAGACACCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR CAA 90 bp | AGGTCTACAAGTTTGAAGCTGTCAGGGAACAATCGGCTCCTTTGCTGGCCAGTGAGAGGAGGAAGACTATaGGTCTGCTGCCCTTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: RSTSLKLSGNNRLLCWPVRGGRL*VCCPSH Trigger: ATGGGAAGGGCAGCAGACCAATAGTCTTCCTCCTCT...CACTGGCCAGCAAAGGAGCCGATTGTTCCCTGACAGCTTCAAACTTGTAGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR TCA 72 bp | CTGGCTGCTGGGAAGGGTGCTATTGTGAAGAGGATATaGGAGATGGGCCCCAGGCATCCAGTTATAAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: LAAGKGAIVKRI*EMGPRHPVISV Trigger: TACACTTATAACTGGATGCCTGGGGCCCATCTCTCATATCCTCTTCACAATAGCACCCTTCCCAGCAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR TCA 72 bp | GCCCAGAATCCCTGTGCTTCACATAGCAGGGGAAAGTaGTGTCTCTGGTCCTTCCTAAGAAGTAGTCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: AQNPCASHSRGK*CLWSFLRSSLR Trigger: CCTCAGACTACTTCTTAGGAAGGACCAGAGACATCACTTTCCCCTGCTATGTGAAGCACAGGGATTCTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR TCA 72 bp | CCTGCTCTGTTATTTCTCTGCTCAGGTCTACAAGTTTaGAGCTGTCAGGGAACAATCGGCTCCTTTGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: PALLFLCSGLQV*SCQGTIGSFAG Trigger: GCCAGCAAAGGAGCCGATTGTTCCCTGACAGCTTCAAACTTGTAGACCTGAGCAGAGAAATAACAGAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR GCA 72 bp | GCATTTGTAGATGTCTGGGGGTGTTTGCAGATGCCATaGCCTGGCAGATCCATTTATTGTGAACTTTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: AFVDVWGCLQMP*PGRSIYCELWR Trigger: CCTCCAAAGTTCACAATAAATGGATCTGCCAGGGCATGGCATCTGCAAACACCCCCAGACATCTACAAATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR CCA 72 bp | ATGCCATGCCCTGGCAGATCCATTTATTGTGAACTTTaGAGGGACATGAGCTTTGGGTCTGTGTGTCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: MPCPGRSIYCEL*RDMSFGSVCLA Trigger: TGCTAGACACACAGACCCAAAGCTCATGTCCCTCCAAAGTTCACAATAAATGGATCTGCCAGGGCATGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR-3UTR CAA 90 bp | TCCGGGCTGACTTTTAACTCCTCTCCTGCTCTGTTATTTCTCTGCTCAGGTCTAGGAAACAGAGGAGCTTaGACTCTAGCTGGTAGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SGLTFNSSPALLFLCSGLGNRGA*TLAGSL Trigger: TAAACTACCAGCTAGAGTCAAAGCTCCTCTGTTTCC...TAGACCTGAGCAGAGAAATAACAGAGCAGGAGAGGAGTTAAAAGTCAGCCCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR CCA 72 bp | ATAGAACTCCTTTCTGAGCGTGGGTGGTTTTCTGATTaGCAGCTCCTATCAGTAATCCTATGTGACAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: IELLSERGWFSD*QLLSVILCDKP Trigger: GGGCTTGTCACATAGGATTACTGATAGGAGCTGCCAATCAGAAAACCACCCACGCTCAGAAAGGAGTTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR GCA 72 bp | AACTCTAACAGTTTACCTTCCAACATTGGATGTTTTTaGCCTTGGTTTCTTCCTGCAACCATTGTCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: NSNSLPSNIGCF*PWFLPATIVTQ Trigger: CTGTGTGACAATGGTTGCAGGAAGAAACCAAGGGCAAAAACATCCAATGTTGGAAGGTAAACTGTTAGAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR TCA 90 bp | CCTGAGGGGAGGGGTCCAGGAGACTATAAACTGAGGAATGAGGAGCTTCCTGGGTGGCTGAGGCTGTGCTaGAGCCCCTGCGGCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PEGRGPGDYKLRNEELPGWLRLC*SPCGCR Trigger: CCGGCAGCCGCAGGGGCTTCAGCACAGCCTCAGCCA...CCCAGGAAGCTCCTCATTCCTCAGTTTATAGTCTCCTGGACCCCTCCCCTCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR CCA 90 bp | GATGGCCTGGGAGACACGGACTCCTCCATTGCTGCACCTGGAGGAAAGGGGCAGCTGCGGCTGCCGGAGTaGAAGGTGATGGTGGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: DGLGDTDSSIAAPGGKGQLRLPE*KVMVDC Trigger: GCAATCCACCATCACCTTCCACTCCGGCAGCCGCAG...CTGCCCCTTTCCTCCAGGTGCAGCAATGGAGGAGTCCGTGTCTCCCAGGCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR CCA 90 bp | CGGAGTTGCTCCAGGCTCATCAGCACTGCACACAGAGGACTGAGCCAAACACATGGAGCCACTGCCCACTaGGCCCCGGCTGCTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSCSRLISTAHRGLSQTHGATAH*APAAGG Trigger: ACCACCAGCAGCCGGGGCCCAGTGGGCAGTGGCTCC...ATGTGTTTGGCTCAGTCCTCTGTGTGCAGTGCTGATGAGCCTGGAGCAACTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR TCA 90 bp | CCTGAGGGGAGGGGTCCAGGAGACTATAAACTGAGGAATGAGGAGCTTCCTGGGTCCCCCACTGTTTCCTaGGGAGCGGGCCACAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: PEGRGPGDYKLRNEELPGSPTVS*GAGHRH Trigger: GTGTCTGTGGCCCGCTCCTCAGGAAACAGTGGGGGA...CCCAGGAAGCTCCTCATTCCTCAGTTTATAGTCTCCTGGACCCCTCCCCTCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR TCA 90 bp | ACATGGCCAGGGAATCCTGGAGACAACACTAGAACCCAGTGTCTGATTGGGCTGTGCCTCTTTCAGCTGTaGTGCCATCCAGCTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TWPGNPGDNTRTQCLIGLCLFQL*CHPAAG Trigger: GCCGGCAGCTGGATGGCATCACAGCTGAAAGAGGCA...CAGCCCAATCAGACACTGGGTTCTAGTGTTGTCTCCAGGATTCCCTGGCCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR TCA 90 bp | GATGTTTTTGCCCTTGGTTTCTTCCTGCAACCATTGTCACACAGGTCACATGGCCACCAAAGCCACCCCTaGAGCCACTGCCAGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: DVFALGFFLQPLSHRSHGHQSHP*SHCQHS Trigger: GCTGTGCTGGCAGTGGCTTCAGGGGTGGCTTTGGTG...GCCATGTGACCTGTGTGACAATGGTTGCAGGAAGAAACCAAGGGCAAAAACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR TCA 90 bp | TCTCTGCTCAGGTCTACAAGTTTGAAGCTGTCAGGGAACAATCGGCTCCTTTGCGCCCACCACTGGTCGTaGAGGAGTAGCCACTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLRSTSLKLSGNNRLLCAHHWS*RSSHCS Trigger: GGAACAGTGGCTACTCCTTCACGACCAGTGGTGGGC...GCAAAGGAGCCGATTGTTCCCTGACAGCTTCAAACTTGTAGACCTGAGCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR GCA 90 bp | CTCCTGCTCTGTTATTTCTCTGCTCAGGTCTACAAGTTTGAAGCTGTCAGGGAAAGCCTCCCAGACCTGTaGCCAGGCTGTGCCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCYFSAQVYKFEAVRESLPDL*PGCAHH Trigger: GTGGTGGGCACAGCCTGGGCACAGGTCTGGGAGGCT...TTCCCTGACAGCTTCAAACTTGTAGACCTGAGCAGAGAAATAACAGAGCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR CCA 90 bp | GGTTTAGCCAGGATACCAGGATCCCTGGCTGCTGGGAAGGGTGCTATTGTGAAGCACAGAGATGTTCACTaGGGAAACTCCCTCTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLARIPGSLAAGKGAIVKHRDVH*GNSLSA Trigger: AGCGGAGAGGGAGTTTCCCCAGTGAACATCTCTGTG...CTTCACAATAGCACCCTTCCCAGCAGCCAGGGATCCTGGTATCCTGGCTAAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR TCA 90 bp | CTCCTGCTCTGTTATTTCTCTGCTCAGGTCTACAAGTTTGAAGCTGTCAGGGAACGTAGGTGTGGTGGCTaGGGCTGTGCTGAAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLCYFSAQVYKFEAVRERRCGG*GCAEAP Trigger: AGGGGCTTCAGCACAGCCTCAGCCACCACACCTACG...TTCCCTGACAGCTTCAAACTTGTAGACCTGAGCAGAGAAATAACAGAGCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR GCA 90 bp | CAGGCATCCAGTTATAAGTGTAAAGAGGCATCGGAGCAGTGGCAAGGGAGACTGCATAAGCAAAGCCACTaGTGCCCCCAAAGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QASSYKCKEASEQWQGRLHKQSH*CPQSHC Trigger: GCAGTGGCTTTGGGGGCAGCAGTGGCTTTGCTTATG...CAGTCTCCCTTGCCACTGCTCCGATGCCTCTTTACACTTATAACTGGATGCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR GCA 90 bp | AATGGGTTTAGCCAGGATACCAGGATCCCTGGCTGCTGGGAAGGGTGCTATTGTCAAAGCCCCCTCCAATaGCACCTCCATAAGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NGFSQDTRIPGCWEGCYCQSPLQ*HLHKQS Trigger: GCTTTGCTTATGGAGGTGGCATTGGAGGGGGCTTTG...ACAATAGCACCCTTCCCAGCAGCCAGGGATCCTGGTATCCTGGCTAAACCCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR GCA 90 bp | AGGTCTACAAGTTTGAAGCTGTCAGGGAACAATCGGCTCCTTTGCTGGCCAGTGACTGTCCTAGAGCCCTaGTCCTGCAGGAGATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSTSLKLSGNNRLLCWPVTVLEP*SCRRFH Trigger: GTGGAATCTCCTGCAGGAGCAGGGCTCTAGGACAGT...CACTGGCCAGCAAAGGAGCCGATTGTTCCCTGACAGCTTCAAACTTGTAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR GCA 90 bp | TCCGGGCTGACTTTTAACTCCTCTCCTGCTCTGTTATTTCTCTGCTCAGGTCTACGGCCTGCGGTCACCTaGAGCTCCTCATACTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGLTFNSSPALLFLCSGLRPAVT*SSSYFV Trigger: GACGAAGTATGAGGAGCTGCAGGTGACCGCAGGCCG...TAGACCTGAGCAGAGAAATAACAGAGCAGGAGAGGAGTTAAAAGTCAGCCCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR TCA 90 bp | AGCTGTCAGGGAACAATCGGCTCCTTTGCTGGCCAGTGCCTTGACCACCCATCTTGTTGTTCAGAGTCTTaGTCTGCTCCCGTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SCQGTIGSFAGQCLDHPSCCSES*SAPVLL Trigger: AAGAAGAACGGGAGCAGATCAAGACTCTGAACAACA...AGATGGGTGGTCAAGGCACTGGCCAGCAAAGGAGCCGATTGTTCCCTGACAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR TCA 90 bp | TTTGGGGAGGGTATAGCCTCACCCTGCATGACATACAGAGCAGGAGGCTGGGCAGTAACTCTTTCTGGATaGTGTGCTGGAGACAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: FGEGIASPCMTYRAGGWAVTLSG*CAGDKL Trigger: AAGTTTGTCTCCAGCACATCATCCAGAAAGAGTTAC...TGCCCAGCCTCCTGCTCTGTATGTCATGCAGGGTGAGGCTATACCCTCCCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR CCA 90 bp | ATGGGCCCCAGGCATCCAGTTATAAGTGTAAAGAGGCATCGGAGCAGTGGCAAGTCAGATCTGAGCCTCTaGATCATCCGGTTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MGPRHPVISVKRHRSSGKSDLSL*IIRFIS Trigger: AGAGATGAACCGGATGATCCAGAGGCTCAGATCTGA...CTTGCCACTGCTCCGATGCCTCTTTACACTTATAACTGGATGCCTGGGGCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR CAA 72 bp | AGGGGTTGGGACTTCCCAAACAAGCATTCCAAAGAGTaGGAGCCGCTAGAGGAGGAAGACTATTGGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGWDFPNKHSKE*EPLEEEDYWSA Trigger: AGCAGACCAATAGTCTTCCTCCTCTAGCGGCTCCAACTCTTTGGAATGCTTGTTTGGGAAGTCCCAACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR CAA 72 bp | TACAAGTTTGAAGCTGTCAGGGAACAATCGGCTCCTTaGCTGGCCAGTGCCTTGACCACCCATCTTACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YKFEAVREQSAP*LASALTTHLTS Trigger: TGACGTAAGATGGGTGGTCAAGGCACTGGCCAGCAAAGGAGCCGATTGTTCCCTGACAGCTTCAAACTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR GCA 90 bp | TCTCTGCTCAGGTCTACAAGTTTGAAGCTGTCAGGGAACAATCGGCTCCTTTGCTCTCTTGTTTGGTGTTaGGGAGGTCATCACCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLRSTSLKLSGNNRLLCSLVWC*GGHHHA Trigger: GGCATGGTGATGACCTCCGCAACACCAAACAAGAGA...GCAAAGGAGCCGATTGTTCCCTGACAGCTTCAAACTTGTAGACCTGAGCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR CAA 72 bp | GGTACTGAAGGGGCATTTGTAGATGTCTGGGGGTGTTaGCAGATGCCATGCCCTGGCAGATCCATTTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTEGAFVDVWGC*QMPCPGRSIYC Trigger: ACAATAAATGGATCTGCCAGGGCATGGCATCTGCAAACACCCCCAGACATCTACAAATGCCCCTTCAGTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| 3UTR CAA 72 bp | TCCTGCTCTGTTATTTCTCTGCTCAGGTCTACAAGTTaGAAGCTGTCAGGGAACAATCGGCTCCTTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCSVISLLRSTS*KLSGNNRLLCW Trigger: CCAGCAAAGGAGCCGATTGTTCCCTGACAGCTTCAAACTTGTAGACCTGAGCAGAGAAATAACAGAGCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR GCA 90 bp | TTTTCTGATTGGCAGCTCCTATCAGTAATCCTATGTGACAAGCCCACCCTGACCTCTTCTACAACCTCCTaGATGTTCCTCAGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSDWQLLSVILCDKPTLTSSTTS*MFLSSA Trigger: TGCTGAACTGAGGAACATGCAGGAGGTTGTAGAAGA...GGTCAGGGTGGGCTTGTCACATAGGATTACTGATAGGAGCTGCCAATCAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR CCA 90 bp | GTGAATTTGGCAATTATTTGCACAGTTTTTCCTGTCTACTCTGAAACTGTTACCGCTTGTAACTCTTTCTaGATGATGTGCTGGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: VNLAIICTVFPVYSETVTACNSF*MMCWRQ Trigger: TTGTCTCCAGCACATCATCCAGAAAGAGTTACAAGC...GGTAACAGTTTCAGAGTAGACAGGAAAAACTGTGCAAATAATTGCCAAATTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS TCA 90 bp | GCCAGAACCAATACCACTGATCCTGCCCAGTCCCCCACTGTTTCCTaGGGAGCGGGCCACAGACACGGAGCTGAAGCGGGAGCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARTNTTDPAQSPTVS*GAGHRHGAEAGASS Trigger: GCTGGACGCTCCCGCTTCAGCTCCGTGTCTGTGGCCCGCTCCTCAGGAAACAGTGGGGGACTGGGCAGGATCAGTGGTATTGGTTCTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS GCA 90 bp | AGTTCAGCATCCAGTCTGCCTCTTTCAGCTGTGATGCCATCCAGCTaGCGGCGGAGGTCATTGACATATGTATCGAAGAAAGGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSASSLPLSAVMPSS*RRRSLTYVSKKGSR Trigger: CCTGGAGCCTTTCTTCGATACATATGTCAATGACCTCCGCCGGCAGCTGGATGGCATCACAGCTGAAAGAGGCAGACTGGATGCTGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR CAA 90 bp | TTGACCACCCATCTTACGTCAGCGCTGTCCCAGGAACACAGGCTGATTTGGGGATCTGAAATCTCTTGTTaGGTGTTGCGGAGGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LTTHLTSALSQEHRLIWGSEISC*VLRRSS Trigger: TGATGACCTCCGCAACACCAAACAAGAGATTTCAGA...TCCCCAAATCAGCCTGTGTTCCTGGGACAGCGCTGACGTAAGATGGGTGGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR CAA 90 bp | GATGTTTTTGCCCTTGGTTTCTTCCTGCAACCATTGTCACACAGGTCACATGGCCTGGAGCACTGCTTCTaGACGGCATCAATCTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: DVFALGFFLQPLSHRSHGLEHCF*TASISD Trigger: ATCTGAGATTGATGCCGTCAAGAAGCAGTGCTCCAG...GCCATGTGACCTGTGTGACAATGGTTGCAGGAAGAAACCAAGGGCAAAAACATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS-3UTR CAA 90 bp | CAGTATCATGGGAGACAAACTCTAACAGTTTACCTTCCAACATTGGATGTTTTTGTGCTGGAGACAAACTaGATGCTGGAGCCACTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QYHGRQTLTVYLPTLDVFVLETN*MLEPLP Trigger: GGGCAGTGGCTCCAGCATCAAGTTTGTCTCCAGCAC...AAAAACATCCAATGTTGGAAGGTAAACTGTTAGAGTTTGTCTCCCATGATACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS TCA 72 bp | AATACCACTGATCCTGCCCAGTCCCCCACTGTTTCCTaGGGAGCGGGCCACAGACACGGAGCTGAAGCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: NTTDPAQSPTVS*GAGHRHGAEAG Trigger: TCCCGCTTCAGCTCCGTGTCTGTGGCCCGCTCCTCAGGAAACAGTGGGGGACTGGGCAGGATCAGTGGTATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS TCA 72 bp | AGAGGCTGCGGCTTCCAAAGCCAGAACCAATACCACTaGTCCTGCCCAGTCCCCCACTGTTTCCTGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RGCGFQSQNQYH*SCPVPHCFLRS Trigger: GCTCCTCAGGAAACAGTGGGGGACTGGGCAGGATCAGTGGTATTGGTTCTGGCTTTGGAAGCCGCAGCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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| CDS GCA 72 bp | GGTGTCACTCACCTGGTTCTGCATCTGAGACAGCTCTaGCTCATAGATCATCCGGTAGAAGTTGATCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GVTHLVLHLRQL*LIDHPVEVDLV Trigger: GACCAGATCAACTTCTACCGGATGATCTATGAGGCAGAGCTGTCTCAGATGCAGAACCAGGTGAGTGACACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042957.6 |
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