Pregenerated sensors for KRT73 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063661Ensembl transcript IDs: ENSMUST00000063292.8
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGACAACATAGAGGCTGCAAGGGGGCAGGCAGGCAAGTCCTCATaGATGTGTGGAAGGCTAAGAAGTAGTCCCTTCACACTGGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: EDNIEAARGQAGKSS*MCGRLRSSPFTLGQ Trigger: CTGCCCCAGTGTGAAGGGACTACTTCTTAGCCTTCCACACATTCATGAGGACTTGCCTGCCTGCCCCCTTGCAGCCTCTATGTTGTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| 3UTR GCA 90 bp | GGTCCAGAATGGATGGGGACCCCCAGTCCTATAACAAGAGATTTATaGCAGATACAACGGTGCCAGGTGCTTGATCCATGCTGGGTTGGT | + |
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Preference number: 1 (lower is better) Translates to: GPEWMGTPSPITRDL*QIQRCQVLDPCWVG Trigger: ACCAACCCAGCATGGATCAAGCACCTGGCACCGTTGTATCTGGCATAAATCTCTTGTTATAGGACTGGGGGTCCCCATCCATTCTGGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| 3UTR TCA 90 bp | GGGTTTGATGATAAGGCCACGTTGACAACAAAGAAAGGTAAAATGTaGGCAATGGTAAATAAAACAGGAGGAGTTCCTGGAAGAGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: GFDDKATLTTKKGKM*AMVNKTGGVPGRES Trigger: GGACTCTCTTCCAGGAACTCCTCCTGTTTTATTTACCATTGCTCACATTTTACCTTTCTTTGTTGTCAACGTGGCCTTATCATCAAACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGCAGGAGGACAACATAGAGGCTGCAAGGGGGCAGGCAGGCAAGTCCTCAAACAGGAGGAGTTCCTaGAAGAGAGTCCAGAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: KQQEDNIEAARGQAGKSSNRRSS*KRVQRK Trigger: TTTTCTCTGGACTCTCTTCCAGGAACTCCTCCTGTT...TGAGGACTTGCCTGCCTGCCCCCTTGCAGCCTCTATGTTGTCCTCCTGCTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCTCTTGCACCCAGACTATCATAAGCAGCAGGAGGACAACATAGAGGCTGCAGTAGTCCCTTCACACTaGGGCAGAAAGATGCATGAG | + |
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Preference number: 2 (lower is better) Translates to: SLLHPDYHKQQEDNIEAAVVPSH*GRKMHE Trigger: CTCATGCATCTTTCTGCCCCAGTGTGAAGGGACTAC...TGCAGCCTCTATGTTGTCCTCCTGCTGCTTATGATAGTCTGGGTGCAAGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| 3UTR-3UTR GCA 90 bp | TTTATTTTATTAGTGGGGTACAGGAGCAGAGAGCTGGAACCTAAGCAAGGTCCAATAACAAGAGATTTATaGCAGATACAACGGTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: FILLVGYRSRELEPKQGPITRDL*QIQRCQ Trigger: CTGGCACCGTTGTATCTGGCATAAATCTCTTGTTAT...TGGACCTTGCTTAGGTTCCAGCTCTCTGCTCCTGTACCCCACTAATAAAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| 3UTR TCA 72 bp | ATAGAGGCTGCAAGGGGGCAGGCAGGCAAGTCCTCATaGATGTGTGGAAGGCTAAGAAGTAGTCCCTTCACA | + |
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Preference number: 3 (lower is better) Translates to: IEAARGQAGKSS*MCGRLRSSPFT Trigger: TGTGAAGGGACTACTTCTTAGCCTTCCACACATTCATGAGGACTTGCCTGCCTGCCCCCTTGCAGCCTCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| 3UTR GCA 72 bp | TGGATGGGGACCCCCAGTCCTATAACAAGAGATTTATaGCAGATACAACGGTGCCAGGTGCTTGATCCATGC | + |
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Preference number: 3 (lower is better) Translates to: WMGTPSPITRDL*QIQRCQVLDPC Trigger: GCATGGATCAAGCACCTGGCACCGTTGTATCTGGCATAAATCTCTTGTTATAGGACTGGGGGTCCCCATCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| 3UTR CCA 72 bp | AGGAGCAGAGAGCTGGAACCTAAGCAAGGTCCAGAATaGATGGGGACCCCCAGTCCTATAACAAGAGATTTA | + |
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Preference number: 3 (lower is better) Translates to: RSRELEPKQGPE*MGTPSPITRDL Trigger: TAAATCTCTTGTTATAGGACTGGGGGTCCCCATCCATTCTGGACCTTGCTTAGGTTCCAGCTCTCTGCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| 3UTR GCA 72 bp | CTTGCAGGAATGTCCATCAACACACTTCAAGTCTCTTaGACCCAGACTATCATAAGCAGCAGGAGGACAACA | + |
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Preference number: 3 (lower is better) Translates to: LAGMSINTLQVS*TQTIISSRRTT Trigger: TGTTGTCCTCCTGCTGCTTATGATAGTCTGGGTGCAAGAGACTTGAAGTGTGTTGATGGACATTCCTGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| 3UTR GCA 72 bp | AGTCCTATAACAAGAGATTTATGCCAGATACAACGGTaGCAGGTGCTTGATCCATGCTGGGTTGGTTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: SPITRDLCQIQR*QVLDPCWVGSC Trigger: GCAAGAACCAACCCAGCATGGATCAAGCACCTGGCACCGTTGTATCTGGCATAAATCTCTTGTTATAGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| 3UTR-3UTR CAA 90 bp | TTTATTTTATTAGTGGGGTACAGGAGCAGAGAGCTGGAACCTAAGCAAGGTCCACACACTTCAAGTCTCTaGCACCCAGACTATCATAAG | + |
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Preference number: 3 (lower is better) Translates to: FILLVGYRSRELEPKQGPHTSSL*HPDYHK Trigger: CTTATGATAGTCTGGGTGCAAGAGACTTGAAGTGTG...TGGACCTTGCTTAGGTTCCAGCTCTCTGCTCCTGTACCCCACTAATAAAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR TCA 90 bp | AAGCAGCAGGAGGACAACATAGAGGCTGCAAGGGGGCAGGCAGGCAAGTCCTCATGGCCCGGGCATCCTTaGGGGCACAGTCACCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: KQQEDNIEAARGQAGKSSWPGHP*GHSHLA Trigger: AGCGAGGTGACTGTGCCCTCAAGGATGCCCGGGCCA...TGAGGACTTGCCTGCCTGCCCCCTTGCAGCCTCTATGTTGTCCTCCTGCTGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR CCA 90 bp | AAGCAGCAGGAGGACAACATAGAGGCTGCAAGGGGGCAGGCAGGCAAGTCCTCATTGACTGTTACCTGGTaGATGCCTCCAGGCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: KQQEDNIEAARGQAGKSSLTVTW*MPPGRH Trigger: GTGCCTGCCTGGAGGCATCCACCAGGTAACAGTCAA...TGAGGACTTGCCTGCCTGCCCCCTTGCAGCCTCTATGTTGTCCTCCTGCTGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR TCA 90 bp | AAGCAGCAGGAGGACAACATAGAGGCTGCAAGGGGGCAGGCAGGCAAGTCCTCACCAGGAGGCTTTTATTaGCTGTTACCTGGTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: KQQEDNIEAARGQAGKSSPGGFY*LLPGGC Trigger: GCATCCACCAGGTAACAGTCAATAAAAGCCTCCTGG...TGAGGACTTGCCTGCCTGCCCCCTTGCAGCCTCTATGTTGTCCTCCTGCTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR TCA 90 bp | TTTATTTTATTAGTGGGGTACAGGAGCAGAGAGCTGGAACCTAAGCAAGGTCCACAGCTGAGCAGCCGCTaGAGCCCCTGTTGGCAACTC | + |
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Preference number: 4 (lower is better) Translates to: FILLVGYRSRELEPKQGPQLSSR*SPCWQL Trigger: GAGTTGCCAACAGGGGCTTCAGCGGCTGCTCAGCTG...TGGACCTTGCTTAGGTTCCAGCTCTCTGCTCCTGTACCCCACTAATAAAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR GCA 90 bp | AAGCAAGGTCCAGAATGGATGGGGACCCCCAGTCCTATAACAAGAGATTTATGCGCCCCAGAGCCCCACTaGCAAACATACTGCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: KQGPEWMGTPSPITRDLCAPEPH*QTYCQQ Trigger: TTGCTGGCAGTATGTTTGGCAGTGGGGCTCTGGGGC...GCATAAATCTCTTGTTATAGGACTGGGGGTCCCCATCCATTCTGGACCTTGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR GCA 90 bp | AAAACAGGAGGAGTTCCTGGAAGAGAGTCCAGAGAAAACCAAAGCTCGGCAGAACTGTTACCTGGTGGATaGCTCCAGGCAGGCACAAGG | + |
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Preference number: 4 (lower is better) Translates to: KTGGVPGRESRENQSSAELLPGG*LQAGTR Trigger: CCTTGTGCCTGCCTGGAGGCATCCACCAGGTAACAG...TTCTGCCGAGCTTTGGTTTTCTCTGGACTCTCTTCCAGGAACTCCTCCTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR GCA 90 bp | AGTCTCTTGCACCCAGACTATCATAAGCAGCAGGAGGACAACATAGAGGCTGCAGAATCCAGCTGCTTTTaGAGGCTGCTGATGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SLLHPDYHKQQEDNIEAAESSCF*RLLMWA Trigger: GGCCCACATCAGCAGCCTGCAAAAGCAGCTGGATTC...TGCAGCCTCTATGTTGTCCTCCTGCTGCTTATGATAGTCTGGGTGCAAGAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR CCA 90 bp | GAGGAGTTCCTGGAAGAGAGTCCAGAGAAAACCAAAGCTCGGCAGAAATGGGGGGCAGCTCTTGGAACTTaGTCTGGTACACCATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: EEFLEESPEKTKARQKWGAALGT*SGTPSQ Trigger: CTGAGATGGTGTACCAGACCAAGTTCCAAGAGCTGC...CCCCCATTTCTGCCGAGCTTTGGTTTTCTCTGGACTCTCTTCCAGGAACTCCTC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR GCA 90 bp | AACACACTTCAAGTCTCTTGCACCCAGACTATCATAAGCAGCAGGAGGACAACAGTTCTCCAGACATCCTaGACTCCTCCCCCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NTLQVSCTQTIISSRRTTVLQTS*TPPPPA Trigger: TGCTGGAGGGGGAGGAGTGCAGGATGTCTGGAGAAC...TGTTGTCCTCCTGCTGCTTATGATAGTCTGGGTGCAAGAGACTTGAAGTGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR TCA 90 bp | TTTATTTTATTAGTGGGGTACAGGAGCAGAGAGCTGGAACCTAAGCAAGGTCCAGCACAAGGATGGATTTaGAGGCCCCAGAGCCCCACT | + |
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Preference number: 4 (lower is better) Translates to: FILLVGYRSRELEPKQGPAQGWI*RPQSPT Trigger: AGTGGGGCTCTGGGGCCTTCAAATCCATCCTTGTGC...TGGACCTTGCTTAGGTTCCAGCTCTCTGCTCCTGTACCCCACTAATAAAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR GCA 90 bp | AAAACAGGAGGAGTTCCTGGAAGAGAGTCCAGAGAAAACCAAAGCTCGGCAGAATCTCAGCCTCTGCCTTaGTCTTCAGGGCAATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: KTGGVPGRESRENQSSAESQPLP*SSGQCP Trigger: AGGACATTGCCCTGAAGAGCAAGGCAGAGGCTGAGA...TTCTGCCGAGCTTTGGTTTTCTCTGGACTCTCTTCCAGGAACTCCTCCTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR GCA 90 bp | TTTATTTTATTAGTGGGGTACAGGAGCAGAGAGCTGGAACCTAAGCAAGGTCCATCCTCCTTAGCCTGGTaGAGGGCTCTCTCCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: FILLVGYRSRELEPKQGPSSLAW*RALSSS Trigger: TGAGCTGGAGAGAGCCCTGCACCAGGCTAAGGAGGA...TGGACCTTGCTTAGGTTCCAGCTCTCTGCTCCTGTACCCCACTAATAAAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| 3UTR CAA 72 bp | CAAGAGATTTATGCCAGATACAACGGTGCCAGGTGCTaGATCCATGCTGGGTTGGTTCTTGCAGGAATGTCC | + |
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Preference number: 4 (lower is better) Translates to: QEIYARYNGARC*IHAGLVLAGMS Trigger: GGACATTCCTGCAAGAACCAACCCAGCATGGATCAAGCACCTGGCACCGTTGTATCTGGCATAAATCTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR TCA 90 bp | TTATTTATTTTATTAGTGGGGTACAGGAGCAGAGAGCTGGAACCTAAGCAAGGTAGTGACACAGCCCCCTaGCAGTATGCCATAGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: LFILLVGYRSRELEPKQGSDTAP*QYAIAP Trigger: GGGGGCTATGGCATACTGTCAGGGGGCTGTGTCACT...ACCTTGCTTAGGTTCCAGCTCTCTGCTCCTGTACCCCACTAATAAAATAAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR GCA 90 bp | AAGCAAGGTCCAGAATGGATGGGGACCCCCAGTCCTATAACAAGAGATTTATGCGATAGCGAATCCAGCTaGTTTTGCAGGCTGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: KQGPEWMGTPSPITRDLCDSESS*FCRLLM Trigger: CATCAGCAGCCTGCAAAAGCAGCTGGATTCGCTATC...GCATAAATCTCTTGTTATAGGACTGGGGGTCCCCATCCATTCTGGACCTTGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| 3UTR CAA 72 bp | AGATACAACGGTGCCAGGTGCTTGATCCATGCTGGGTaGGTTCTTGCAGGAATGTCCATCAACACACTTCAA | + |
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Preference number: 4 (lower is better) Translates to: RYNGARCLIHAG*VLAGMSINTLQ Trigger: TTGAAGTGTGTTGATGGACATTCCTGCAAGAACCAACCCAGCATGGATCAAGCACCTGGCACCGTTGTATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR CCA 90 bp | AAGCAAGGTCCAGAATGGATGGGGACCCCCAGTCCTATAACAAGAGATTTATGCAAATGCTCACAGCACTaGTGTGTTCTCCAGACATCC | + |
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Preference number: 4 (lower is better) Translates to: KQGPEWMGTPSPITRDLCKCSQH*CVLQTS Trigger: GGATGTCTGGAGAACACACCAGTGCTGTGAGCATTT...GCATAAATCTCTTGTTATAGGACTGGGGGTCCCCATCCATTCTGGACCTTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| 3UTR CAA 72 bp | TCTTGCAGGAATGTCCATCAACACACTTCAAGTCTCTaGCACCCAGACTATCATAAGCAGCAGGAGGACAAC | + |
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Preference number: 4 (lower is better) Translates to: SCRNVHQHTSSL*HPDYHKQQEDN Trigger: GTTGTCCTCCTGCTGCTTATGATAGTCTGGGTGCAAGAGACTTGAAGTGTGTTGATGGACATTCCTGCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR CCA 90 bp | AAGCAAGGTCCAGAATGGATGGGGACCCCCAGTCCTATAACAAGAGATTTATGCTGGCTGTCTCTAGATTaGAACATTGCTTCTTCACAC | + |
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Preference number: 4 (lower is better) Translates to: KQGPEWMGTPSPITRDLCWLSLD*NIASSH Trigger: GTGTGAAGAAGCAATGTTCCAATCTAGAGACAGCCA...GCATAAATCTCTTGTTATAGGACTGGGGGTCCCCATCCATTCTGGACCTTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR CAA 90 bp | TATCATAAGCAGCAGGAGGACAACATAGAGGCTGCAAGGGGGCAGGCAGGCAAGGGCACAAGGATGGATTaGAAGGCCCCAGAGCCCCAC | + |
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Preference number: 5 (lower is better) Translates to: YHKQQEDNIEAARGQAGKGTRMD*KAPEPH Trigger: GTGGGGCTCTGGGGCCTTCAAATCCATCCTTGTGCC...CTTGCCTGCCTGCCCCCTTGCAGCCTCTATGTTGTCCTCCTGCTGCTTATGATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR CAA 90 bp | AGTCTCTTGCACCCAGACTATCATAAGCAGCAGGAGGACAACATAGAGGCTGCACCGCTGAAGCCCCTGTaGGCAACTCCAGGTTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: SLLHPDYHKQQEDNIEAAPLKPL*ATPGLQ Trigger: CTGCAAACCTGGAGTTGCCAACAGGGGCTTCAGCGG...TGCAGCCTCTATGTTGTCCTCCTGCTGCTTATGATAGTCTGGGTGCAAGAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR CAA 90 bp | AAAACAGGAGGAGTTCCTGGAAGAGAGTCCAGAGAAAACCAAAGCTCGGCAGAATCATTCCTGGTGTGCTaGAGGTCATCTCCGTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: KTGGVPGRESRENQSSAESFLVC*RSSPCR Trigger: CCGGCACGGAGATGACCTCAAGCACACCAGGAATGA...TTCTGCCGAGCTTTGGTTTTCTCTGGACTCTCTTCCAGGAACTCCTCCTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR CAA 90 bp | AACACACTTCAAGTCTCTTGCACCCAGACTATCATAAGCAGCAGGAGGACAACACTACCCAGTCTGTTCTaGGTATCTCCACGGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: NTLQVSCTQTIISSRRTTLPSLF*VSPRGL Trigger: CAGCCCCCGTGGAGATACCAAGAACAGACTGGGTAG...TGTTGTCCTCCTGCTGCTTATGATAGTCTGGGTGCAAGAGACTTGAAGTGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR CAA 90 bp | AACACACTTCAAGTCTCTTGCACCCAGACTATCATAAGCAGCAGGAGGACAACATGCCAGCTGCAGCTCTaGGAACTTGGTCTGGTACAC | + |
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Preference number: 5 (lower is better) Translates to: NTLQVSCTQTIISSRRTTCQLQL*ELGLVH Trigger: GTGTACCAGACCAAGTTCCAAGAGCTGCAGCTGGCA...TGTTGTCCTCCTGCTGCTTATGATAGTCTGGGTGCAAGAGACTTGAAGTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR CAA 90 bp | TATCATAAGCAGCAGGAGGACAACATAGAGGCTGCAAGGGGGCAGGCAGGCAAGATGGCTGTCTCTAGATaGGAACATTGCTTCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: YHKQQEDNIEAARGQAGKMAVSR*EHCFFT Trigger: TGTGAAGAAGCAATGTTCCAATCTAGAGACAGCCAT...CTTGCCTGCCTGCCCCCTTGCAGCCTCTATGTTGTCCTCCTGCTGCTTATGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR CAA 90 bp | AAAACAGGAGGAGTTCCTGGAAGAGAGTCCAGAGAAAACCAAAGCTCGGCAGAATCTTCATACCTCTTCTaGCAGTCCTCCACTGCATCC | + |
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Preference number: 5 (lower is better) Translates to: KTGGVPGRESRENQSSAESSYLF*QSSTAS Trigger: GGATGCAGTGGAGGACTGCAAGAAGAGGTATGAAGA...TTCTGCCGAGCTTTGGTTTTCTCTGGACTCTCTTCCAGGAACTCCTCCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR CAA 90 bp | AACACACTTCAAGTCTCTTGCACCCAGACTATCATAAGCAGCAGGAGGACAACAAGACACTTGAGGAATTaGATCTCTCCATCCAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: NTLQVSCTQTIISSRRTTRHLRN*ISPSRA Trigger: CGCCCTGGATGGAGAGATCAAATTCCTCAAGTGTCT...TGTTGTCCTCCTGCTGCTTATGATAGTCTGGGTGCAAGAGACTTGAAGTGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR CAA 90 bp | AAGCAAGGTCCAGAATGGATGGGGACCCCCAGTCCTATAACAAGAGATTTATGCATCTCATGGTTTTCTTaGAGGGTGAGCCCAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: KQGPEWMGTPSPITRDLCISWFS*RVSPKP Trigger: TGGCTTTGGGCTCACCCTCAAAGAAAACCATGAGAT...GCATAAATCTCTTGTTATAGGACTGGGGGTCCCCATCCATTCTGGACCTTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR CAA 90 bp | GAGGAGTTCCTGGAAGAGAGTCCAGAGAAAACCAAAGCTCGGCAGAAATGGGGGTCAGCAGTTGTACGCTaGTTTATTTCTTCTTCATAC | + |
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Preference number: 5 (lower is better) Translates to: EEFLEESPEKTKARQKWGSAVVR*FISSSY Trigger: GTATGAAGAAGAAATAAACAAGCGTACAACTGCTGA...CCCCCATTTCTGCCGAGCTTTGGTTTTCTCTGGACTCTCTTCCAGGAACTCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS-3UTR CAA 90 bp | TTATTTATTTTATTAGTGGGGTACAGGAGCAGAGAGCTGGAACCTAAGCAAGGTATCTCAGCCTCTGCCTaGCTCTTCAGGGCAATGTCC | + |
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Preference number: 5 (lower is better) Translates to: LFILLVGYRSRELEPKQGISASA*LFRAMS Trigger: GGACATTGCCCTGAAGAGCAAGGCAGAGGCTGAGAT...ACCTTGCTTAGGTTCCAGCTCTCTGCTCCTGTACCCCACTAATAAAATAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS GCA 72 bp | GAATCCGAAACTGGTCCCCGCACCGACTGTCCCAGGTaGGGAACTACTGATGACAGAAATGCTCACAGCACT | + |
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Preference number: 6 (lower is better) Translates to: ESETGPRTDCPR*GTTDDRNAHST Trigger: AGTGCTGTGAGCATTTCTGTCATCAGTAGTTCCGCACCTGGGACAGTCGGTGCGGGGACCAGTTTCGGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS CAA 90 bp | TTTCCCGAAACCTCCTTAAATTCACTTGCACTACCCAGTCTGTTCTaGGTATCTCCACGGGGGCTGCAGTTCCCACTACCAGTGACACAG | + |
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Preference number: 6 (lower is better) Translates to: FPETSLNSLALPSLF*VSPRGLQFPLPVTQ Trigger: CTGTGTCACTGGTAGTGGGAACTGCAGCCCCCGTGGAGATACCAAGAACAGACTGGGTAGTGCAAGTGAATTTAAGGAGGTTTCGGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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| CDS GCA 72 bp | AGCCAAGGTCTTTCCCGAAACCTCCTTAAATTCACTTaGACTACCCAGTCTGTTCTTGGTATCTCCACGGGG | + |
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Preference number: 6 (lower is better) Translates to: SQGLSRNLLKFT*TTQSVLGISTG Trigger: CCCCGTGGAGATACCAAGAACAGACTGGGTAGTGCAAGTGAATTTAAGGAGGTTTCGGGAAAGACCTTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063292.8 |
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