Pregenerated sensors for KRT72 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056605Ensembl transcript IDs: ENSMUST00000071104.6
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGGCAGCTATCCAGTAAGAAGAGAGTGGGATAGAGCATGTGACTaGCTGGCCTTCTCCTACCCGATAGTTCCCTGTGCCAGGGAAACA | + |
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Preference number: 1 (lower is better) Translates to: GGSYPVRREWDRACD*LAFSYPIVPCARET Trigger: TGTTTCCCTGGCACAGGGAACTATCGGGTAGGAGAAGGCCAGCCAGTCACATGCTCTATCCCACTCTCTTCTTACTGGATAGCTGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| 3UTR CCA 90 bp | CCTGCTTCATCTCTGTGTGGGGGCAGCTATCCAGTAAGAAGAGAGTaGGATAGAGCATGTGACTGGCTGGCCTTCTCCTACCCGATAGTT | + |
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Preference number: 1 (lower is better) Translates to: PASSLCGGSYPVRRE*DRACDWLAFSYPIV Trigger: AACTATCGGGTAGGAGAAGGCCAGCCAGTCACATGCTCTATCCCACTCTCTTCTTACTGGATAGCTGCCCCCACACAGAGATGAAGCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| 3UTR TCA 90 bp | GGGAGAATAGTTGGGATTTCAGTGATGGAGAAAACGCTTGCTTCCTaGCTTAGAAAGGGACCCAAGGGAAGAGAACAGGAACATGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: GRIVGISVMEKTLAS*LRKGPKGREQEHGV Trigger: GACCCCATGTTCCTGTTCTCTTCCCTTGGGTCCCTTTCTAAGTCAGGAAGCAAGCGTTTTCTCCATCACTGAAATCCCAACTATTCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| 3UTR-3UTR GCA 90 bp | GAGGACAACAGGAAAGGCCCTCTTGATAGGGAAGGCTGGAGGAAGACACAAACACCCGATAGTTCCCTGTaGCAGGGAAACAGGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: EDNRKGPLDREGWRKTQTPDSSL*QGNRAG Trigger: CCCAGCCCTGTTTCCCTGGCACAGGGAACTATCGGG...TGTTTGTGTCTTCCTCCAGCCTTCCCTATCAAGAGGGCCTTTCCTGTTGTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| 3UTR-3UTR CCA 90 bp | GGCTTCAGGGACATATCTCGGGCCCCTGCTTCATCTCTGTGTGGGGGCAGCTATCCAGGGAAACAGGGCTaGGAGAATAGTTGGGATTTC | + |
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Preference number: 2 (lower is better) Translates to: GFRDISRAPASSLCGGSYPGKQG*ENSWDF Trigger: GAAATCCCAACTATTCTCCCAGCCCTGTTTCCCTGG...ATAGCTGCCCCCACACAGAGATGAAGCAGGGGCCCGAGATATGTCCCTGAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| 3UTR-3UTR CCA 90 bp | GCTAGCAGTTGGCTTCAGGGACATATCTCGGGCCCCTGCTTCATCTCTGTGTGGCCAGTAAGAAGAGAGTaGGATAGAGCATGTGACTGG | + |
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Preference number: 2 (lower is better) Translates to: ASSWLQGHISGPCFISVWPVRRE*DRACDW Trigger: CCAGTCACATGCTCTATCCCACTCTCTTCTTACTGG...CCACACAGAGATGAAGCAGGGGCCCGAGATATGTCCCTGAAGCCAACTGCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGGGAAACAGGGCTGGGAGAATAGTTGGGATTTCAGTGATGGAGAAAACGAAGAGAACAGGAACATaGGGTCCACAGCCTTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: CQGNRAGRIVGISVMEKTKRTGT*GPQPSA Trigger: AGCAGAAGGCTGTGGACCCCATGTTCCTGTTCTCTT...CGTTTTCTCCATCACTGAAATCCCAACTATTCTCCCAGCCCTGTTTCCCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| 3UTR-3UTR CCA 90 bp | AACAGGAAAGGCCCTCTTGATAGGGAAGGCTGGAGGAAGACACAAACAGAGGGGGGCTGGGAGAATAGTTaGGATTTCAGTGATGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: NRKGPLDREGWRKTQTEGGWENS*DFSDGE Trigger: TTCTCCATCACTGAAATCCCAACTATTCTCCCAGCC...CCCCTCTGTTTGTGTCTTCCTCCAGCCTTCCCTATCAAGAGGGCCTTTCCTGTT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| 3UTR GCA 72 bp | GCTAGCAGTTGGCTTCAGGGACATATCTCGGGCCCCTaGTTCATCTCTGTGTGGGGGCAGCTATCCAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: ASSWLQGHISGP*FISVWGQLSSK Trigger: CTTACTGGATAGCTGCCCCCACACAGAGATGAAGCAGGGGCCCGAGATATGTCCCTGAAGCCAACTGCTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| 3UTR CCA 72 bp | TCTCTGTGTGGGGGCAGCTATCCAGTAAGAAGAGAGTaGGATAGAGCATGTGACTGGCTGGCCTTCTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: SLCGGSYPVRRE*DRACDWLAFSY Trigger: GTAGGAGAAGGCCAGCCAGTCACATGCTCTATCCCACTCTCTTCTTACTGGATAGCTGCCCCCACACAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| 3UTR CCA 72 bp | TATCCAGTAAGAAGAGAGTGGGATAGAGCATGTGACTaGCTGGCCTTCTCCTACCCGATAGTTCCCTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: YPVRREWDRACD*LAFSYPIVPCA Trigger: GGCACAGGGAACTATCGGGTAGGAGAAGGCCAGCCAGTCACATGCTCTATCCCACTCTCTTCTTACTGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| 3UTR TCA 72 bp | GTTGGGATTTCAGTGATGGAGAAAACGCTTGCTTCCTaGCTTAGAAAGGGACCCAAGGGAAGAGAACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: VGISVMEKTLAS*LRKGPKGREQE Trigger: TTCCTGTTCTCTTCCCTTGGGTCCCTTTCTAAGTCAGGAAGCAAGCGTTTTCTCCATCACTGAAATCCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR GCA 90 bp | CAGTTGGCTTCAGGGACATATCTCGGGCCCCTGCTTCATCTCTGTGTGGGGGCACGCTGCCGAAGACGGTaGCCACGAAGCCCCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: QLASGTYLGPLLHLCVGARCRRR*PRSPQA Trigger: GGCCTGGGGGCTTCGTGGGCACCGTCTTCGGCAGCG...TGCCCCCACACAGAGATGAAGCAGGGGCCCGAGATATGTCCCTGAAGCCAACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CCA 90 bp | CTTCAGGGACATATCTCGGGCCCCTGCTTCATCTCTGTGTGGGGGCAGCTATCCCGTGTTGGCCTGCAGTaGCCTGCAGCTCCTGGATCT | + |
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Preference number: 4 (lower is better) Translates to: LQGHISGPCFISVWGQLSRVGLQ*PAAPGS Trigger: AGATCCAGGAGCTGCAGGCCACTGCAGGCCAACACG...GGATAGCTGCCCCCACACAGAGATGAAGCAGGGGCCCGAGATATGTCCCTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR TCA 90 bp | TCAGAGGACAACAGGAAAGGCCCTCTTGATAGGGAAGGCTGGAGGAAGACACAAACCGGGAGGGCACACTaGTGGGCATGTGGGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SEDNRKGPLDREGWRKTQTGRAH*WACGPQ Trigger: CTGGGGCCCACATGCCCATCAGTGTGCCCTCCCGGT...TTGTGTCTTCCTCCAGCCTTCCCTATCAAGAGGGCCTTTCCTGTTGTCCTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR GCA 90 bp | TATCCAGTAAGAAGAGAGTGGGATAGAGCATGTGACTGGCTGGCCTTCTCCTACGCCCCAGTCCCGCGCTaGCGAAGACGGTGCCCACGA | + |
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Preference number: 4 (lower is better) Translates to: YPVRREWDRACDWLAFSYAPVPR*RRRCPR Trigger: TCGTGGGCACCGTCTTCGGCAGCGCGGGACTGGGGC...GTAGGAGAAGGCCAGCCAGTCACATGCTCTATCCCACTCTCTTCTTACTGGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR GCA 90 bp | TCGGGCCCCTGCTTCATCTCTGTGTGGGGGCAGCTATCCAGTAAGAAGAGAGTGTGGCCTGCAGTGGCCTaGAGCTCCTGGATCTTACAC | + |
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Preference number: 4 (lower is better) Translates to: SGPCFISVWGQLSSKKRVWPAVA*SSWILH Trigger: GTGTAAGATCCAGGAGCTGCAGGCCACTGCAGGCCA...CACTCTCTTCTTACTGGATAGCTGCCCCCACACAGAGATGAAGCAGGGGCCCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR GCA 90 bp | CTGGCTGGCCTTCTCCTACCCGATAGTTCCCTGTGCCAGGGAAACAGGGCTGGGGTCTATAGTTGTAACTaGTCGAGGCACCAAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LAGLLLPDSSLCQGNRAGVYSCN*SRHQSP Trigger: TGGGCTTTGGTGCCTCGAGCAGTTACAACTATAGAC...CCCAGCCCTGTTTCCCTGGCACAGGGAACTATCGGGTAGGAGAAGGCCAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR TCA 90 bp | ACAGGAAAGGCCCTCTTGATAGGGAAGGCTGGAGGAAGACACAAACAGAGGGGCCAGACTTGGTGTGTTTaGGGTCATCCCCGTGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TGKALLIGKAGGRHKQRGQTWCV*GHPRVG Trigger: GCCAACACGGGGATGACCTCAAACACACCAAGTCTG...GCCCCTCTGTTTGTGTCTTCCTCCAGCCTTCCCTATCAAGAGGGCCTTTCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR TCA 90 bp | GACAACAGGAAAGGCCCTCTTGATAGGGAAGGCTGGAGGAAGACACAAACAGAGCACCAAAGCCCACACTaGAGCCAGCACCTCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: DNRKGPLDREGWRKTQTEHQSPH*SQHLLV Trigger: GACCAGGAGGTGCTGGCTTCAGTGTGGGCTTTGGTG...CTCTGTTTGTGTCTTCCTCCAGCCTTCCCTATCAAGAGGGCCTTTCCTGTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR GCA 90 bp | TCGGGCCCCTGCTTCATCTCTGTGTGGGGGCAGCTATCCAGTAAGAAGAGAGTGCACAGAACAGGCTTCTaGTCCCAAATGCTGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SGPCFISVWGQLSSKKRVHRTGF*SQMLLP Trigger: AGGGAGCAGCATTTGGGAGCAGAAGCCTGTTCTGTG...CACTCTCTTCTTACTGGATAGCTGCCCCCACACAGAGATGAAGCAGGGGCCCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CCA 90 bp | GGCCCCTGCTTCATCTCTGTGTGGGGGCAGCTATCCAGTAAGAAGAGAGTGGGATGGCCGTCTCCAGGTTaGAGCACTGCTTCTTCATGT | + |
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Preference number: 4 (lower is better) Translates to: GPCFISVWGQLSSKKRVGWPSPG*STASSC Trigger: ACATGAAGAAGCAGTGCTCCAACCTGGAGACGGCCA...TCCCACTCTCTTCTTACTGGATAGCTGCCCCCACACAGAGATGAAGCAGGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR GCA 90 bp | GGACCCAAGGGAAGAGAACAGGAACATGGGGTCCACAGCCTTCTGCTTACAACATCTGCTCCCAAATGCTaGTCCCTTGACTCCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: GPKGREQEHGVHSLLLTTSAPKC*SLDSSS Trigger: CGAGCTGGAGTCAAGGGAGCAGCATTTGGGAGCAGA...TGTTGTAAGCAGAAGGCTGTGGACCCCATGTTCCTGTTCTCTTCCCTTGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR GCA 90 bp | TGCAAGAGAGGCAGAGAGCTAGACAGAATCCCCATCAGAGGACAACAGGAAAGGCTGCTCCCTCTCTTGTaGCCGCACCTTCTGGATCTC | + |
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Preference number: 4 (lower is better) Translates to: CKRGRELDRIPIRGQQERLLPLL*PHLLDL Trigger: GAGATCCAGAAGGTGCGGGCACAAGAGAGGGAGCAG...CCTTTCCTGTTGTCCTCTGATGGGGATTCTGTCTAGCTCTCTGCCTCTCTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR GCA 90 bp | GACAACAGGAAAGGCCCTCTTGATAGGGAAGGCTGGAGGAAGACACAAACAGAGTGGTTGTACCGCTGCTaGCTGAGGTTTTGGCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: DNRKGPLDREGWRKTQTEWLYRC*LRFWPE Trigger: CTCCGGCCAAAACCTCAGGCAGCAGCGGTACAACCA...CTCTGTTTGTGTCTTCCTCCAGCCTTCCCTATCAAGAGGGCCTTTCCTGTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR TCA 90 bp | ACAGGAAAGGCCCTCTTGATAGGGAAGGCTGGAGGAAGACACAAACAGAGGGGCGCTTCTGCAGGTTGCTaGTGTAACTCTCATGCACAG | + |
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Preference number: 4 (lower is better) Translates to: TGKALLIGKAGGRHKQRGASAGC*CNSHAQ Trigger: CTGTGCATGAGAGTTACATCAGCAACCTGCAGAAGC...GCCCCTCTGTTTGTGTCTTCCTCCAGCCTTCCCTATCAAGAGGGCCTTTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR GCA 90 bp | CAGTTGGCTTCAGGGACATATCTCGGGCCCCTGCTTCATCTCTGTGTGGGGGCATCCAGGTTGGAGCACTaGTTCTTCATGTTTCCTATC | + |
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Preference number: 4 (lower is better) Translates to: QLASGTYLGPLLHLCVGASRLEH*FFMFPI Trigger: GATAGGAAACATGAAGAAGCAGTGCTCCAACCTGGA...TGCCCCCACACAGAGATGAAGCAGGGGCCCGAGATATGTCCCTGAAGCCAACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CCA 90 bp | GGACCCAAGGGAAGAGAACAGGAACATGGGGTCCACAGCCTTCTGCTTACAACAGTGGCCTGCAGCTCCTaGATCTTACACTGGTACATG | + |
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Preference number: 4 (lower is better) Translates to: GPKGREQEHGVHSLLLTTVACSS*ILHWYM Trigger: CATGTACCAGTGTAAGATCCAGGAGCTGCAGGCCAC...TGTTGTAAGCAGAAGGCTGTGGACCCCATGTTCCTGTTCTCTTCCCTTGGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| 3UTR CAA 72 bp | CAGAATCCCCATCAGAGGACAACAGGAAAGGCCCTCTaGATAGGGAAGGCTGGAGGAAGACACAAACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: QNPHQRTTGKAL*IGKAGGRHKQR Trigger: CCTCTGTTTGTGTCTTCCTCCAGCCTTCCCTATCAAGAGGGCCTTTCCTGTTGTCCTCTGATGGGGATTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR TCA 90 bp | CCATCAATTGTTTATTGCAAGAGAGGCAGAGAGCTAGACAGAATCCCCATCAGATGGCCGGAGGATCCTTaGGCTCGCTGCCACAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: PSIVYCKRGRELDRIPIRWPEDP*ARCHSY Trigger: GTAGCTGTGGCAGCGAGCTCAAGGATCCTCCGGCCA...TCTGATGGGGATTCTGTCTAGCTCTCTGCCTCTCTTGCAATAAACAATTGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR GCA 90 bp | TCTCTGTGTGGGGGCAGCTATCCAGTAAGAAGAGAGTGGGATAGAGCATGTGACAGTACCTGGTTCTGTTaGTCCAAGAAGCGGACCTTG | + |
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Preference number: 4 (lower is better) Translates to: SLCGGSYPVRREWDRACDSTWFC*SKKRTL Trigger: CAAGGTCCGCTTCTTGGAGCAACAGAACCAGGTACT...GTCACATGCTCTATCCCACTCTCTTCTTACTGGATAGCTGCCCCCACACAGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR TCA 90 bp | TCTCTGTGTGGGGGCAGCTATCCAGTAAGAAGAGAGTGGGATAGAGCATGTGACCATGTTTCCTATCTCTaGATGGATCCTCTGGATCAG | + |
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Preference number: 4 (lower is better) Translates to: SLCGGSYPVRREWDRACDHVSYL*MDPLDQ Trigger: CTGATCCAGAGGATCCATTCAGAGATAGGAAACATG...GTCACATGCTCTATCCCACTCTCTTCTTACTGGATAGCTGCCCCCACACAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CCA 90 bp | AAACAGGGCTGGGAGAATAGTTGGGATTTCAGTGATGGAGAAAACGCTTGCTTCTCCTGGATCTTACACTaGTACATGTTCTCCGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: KQGWENSWDFSDGENACFSWILH*YMFSVS Trigger: AGAGACGGAGAACATGTACCAGTGTAAGATCCAGGA...GAAGCAAGCGTTTTCTCCATCACTGAAATCCCAACTATTCTCCCAGCCCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CCA 90 bp | CCATCAATTGTTTATTGCAAGAGAGGCAGAGAGCTAGACAGAATCCCCATCAGATCTGAATGGATCCTCTaGATCAGCCTGTTGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: PSIVYCKRGRELDRIPIRSEWIL*ISLLIS Trigger: AGAGATCAACAGGCTGATCCAGAGGATCCATTCAGA...TCTGATGGGGATTCTGTCTAGCTCTCTGCCTCTCTTGCAATAAACAATTGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS CCA 90 bp | ACGGTGCCCACGAAGCCCCCAGGCCGCCCACCGCTCGCCCCTCCGTaGCCCAGCGTGAAGCCACCACTTCGCCCTGCAGAGCTCAACGCC | + |
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Preference number: 5 (lower is better) Translates to: TVPTKPPGRPPLAPP*PSVKPPLRPAELNA Trigger: GGCGTTGAGCTCTGCAGGGCGAAGTGGTGGCTTCACGCTGGGCCACGGAGGGGCGAGCGGTGGGCGGCCTGGGGGCTTCGTGGGCACCGT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS TCA 90 bp | CTTGACTCCAGCTCGGACCGAGGCGTGACTGCCACTGAGCCTGCCTaGGATGACCGCAGAGCAGCCACTGAAACCCAGGCGCTCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LDSSSDRGVTATEPA*DDRRAATETQALSS Trigger: GGAGCTGAGCGCCTGGGTTTCAGTGGCTGCTCTGCGGTCATCTCAGGCAGGCTCAGTGGCAGTCACGCCTCGGTCCGAGCTGGAGTCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS TCA 90 bp | TTTTGGTTGTACCGCTGCTGCCTGAGGTTTTGGCCGGAGGATCCTTaGGCTCGCTGCCACAGCTACCCTTGGTCTTCACCTCCAGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: FWLYRCCLRFWPEDP*ARCHSYPWSSPPGP Trigger: TGGCCCTGGAGGTGAAGACCAAGGGTAGCTGTGGCAGCGAGCTCAAGGATCCTCCGGCCAAAACCTCAGGCAGCAGCGGTACAACCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CAA 90 bp | GGCCCCTGCTTCATCTCTGTGTGGGGGCAGCTATCCAGTAAGAAGAGAGTGGGATTGGCCCGGGCATCCTaGAGAGCACAGTCACCTCTC | + |
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Preference number: 5 (lower is better) Translates to: GPCFISVWGQLSSKKRVGLARAS*RAQSPL Trigger: GAGAGGTGACTGTGCTCTCAAGGATGCCCGGGCCAA...TCCCACTCTCTTCTTACTGGATAGCTGCCCCCACACAGAGATGAAGCAGGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CAA 90 bp | GCTAGCAGTTGGCTTCAGGGACATATCTCGGGCCCCTGCTTCATCTCTGTGTGGTTGGCCGGAGGATCCTaGAGCTCGCTGCCACAGCTA | + |
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Preference number: 5 (lower is better) Translates to: ASSWLQGHISGPCFISVWLAGGS*SSLPQL Trigger: TAGCTGTGGCAGCGAGCTCAAGGATCCTCCGGCCAA...CCACACAGAGATGAAGCAGGGGCCCGAGATATGTCCCTGAAGCCAACTGCTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CAA 90 bp | GAGAGGCAGAGAGCTAGACAGAATCCCCATCAGAGGACAACAGGAAAGGCCCTCCCAAATGCTGCTCCCTaGACTCCAGCTCGGACCGAG | + |
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Preference number: 5 (lower is better) Translates to: ERQRARQNPHQRTTGKALPNAAP*TPARTE Trigger: CTCGGTCCGAGCTGGAGTCAAGGGAGCAGCATTTGG...GAGGGCCTTTCCTGTTGTCCTCTGATGGGGATTCTGTCTAGCTCTCTGCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CAA 90 bp | CTGGCTGGCCTTCTCCTACCCGATAGTTCCCTGTGCCAGGGAAACAGGGCTGGGCTCTGGATCAGCCTGTaGATCTCTGTGATCTCAGAC | + |
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Preference number: 5 (lower is better) Translates to: LAGLLLPDSSLCQGNRAGLWISL*ISVISD Trigger: GTCTGAGATCACAGAGATCAACAGGCTGATCCAGAG...CCCAGCCCTGTTTCCCTGGCACAGGGAACTATCGGGTAGGAGAAGGCCAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CAA 90 bp | GAGAGGCAGAGAGCTAGACAGAATCCCCATCAGAGGACAACAGGAAAGGCCCTCTCCAGCTGCCGGTTATaGTCCATGGAGAGAATGACG | + |
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Preference number: 5 (lower is better) Translates to: ERQRARQNPHQRTTGKALSSCRL*SMERMT Trigger: CGTCATTCTCTCCATGGACAATAACCGGCAGCTGGA...GAGGGCCTTTCCTGTTGTCCTCTGATGGGGATTCTGTCTAGCTCTCTGCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CAA 90 bp | CTGTGCCAGGGAAACAGGGCTGGGAGAATAGTTGGGATTTCAGTGATGGAGAAACTGCTGCCTGAGGTTTaGGCCGGAGGATCCTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: LCQGNRAGRIVGISVMEKLLPEV*AGGSLS Trigger: GCTCAAGGATCCTCCGGCCAAAACCTCAGGCAGCAG...TTTCTCCATCACTGAAATCCCAACTATTCTCCCAGCCCTGTTTCCCTGGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CAA 90 bp | GGACCCAAGGGAAGAGAACAGGAACATGGGGTCCACAGCCTTCTGCTTACAACATCAGACTTGGTGTGTTaGAGGTCATCCCCGTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: GPKGREQEHGVHSLLLTTSDLVC*RSSPCW Trigger: CCAACACGGGGATGACCTCAAACACACCAAGTCTGA...TGTTGTAAGCAGAAGGCTGTGGACCCCATGTTCCTGTTCTCTTCCCTTGGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CAA 90 bp | TCTCTGTGTGGGGGCAGCTATCCAGTAAGAAGAGAGTGGGATAGAGCATGTGACTGGAGGTCTTTTTGGTaGTACCGCTGCTGCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: SLCGGSYPVRREWDRACDWRSFW*YRCCLR Trigger: CCTCAGGCAGCAGCGGTACAACCAAAAAGACCTCCA...GTCACATGCTCTATCCCACTCTCTTCTTACTGGATAGCTGCCCCCACACAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CAA 90 bp | ACAGGAAAGGCCCTCTTGATAGGGAAGGCTGGAGGAAGACACAAACAGAGGGGCAAATGCTCACAGAATTaGGGTATTCACCAGCCATCC | + |
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Preference number: 5 (lower is better) Translates to: TGKALLIGKAGGRHKQRGKCSQN*GIHQPS Trigger: GGATGGCTGGTGAATACCCAAATTCTGTGAGCATTT...GCCCCTCTGTTTGTGTCTTCCTCCAGCCTTCCCTATCAAGAGGGCCTTTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CAA 90 bp | GATAGGGAAGGCTGGAGGAAGACACAAACAGAGGGGCTAGCAGTTGGCTTCAGGCCTTCAAAGAGAACCTaGAAGAATTTGATGTCATCT | + |
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Preference number: 5 (lower is better) Translates to: DREGWRKTQTEGLAVGFRPSKRT*KNLMSS Trigger: AGATGACATCAAATTCTTCAAGGTTCTCTTTGAAGG...CCTGAAGCCAACTGCTAGCCCCTCTGTTTGTGTCTTCCTCCAGCCTTCCCTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS-3UTR CAA 90 bp | CCATCAATTGTTTATTGCAAGAGAGGCAGAGAGCTAGACAGAATCCCCATCAGATTCTCCGTCTCTGCCTaGCTCTTCACAGCAATCTCC | + |
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Preference number: 5 (lower is better) Translates to: PSIVYCKRGRELDRIPIRFSVSA*LFTAIS Trigger: GGAGATTGCTGTGAAGAGCAAGGCAGAGACGGAGAA...TCTGATGGGGATTCTGTCTAGCTCTCTGCCTCTCTTGCAATAAACAATTGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS GCA 72 bp | GGCATGTGGGCCCCAGTCCCGCGCTGCCGAAGACGGTaGCCACGAAGCCCCCAGGCCGCCCACCGCTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: GMWAPVPRCRRR*PRSPQAAHRSP Trigger: GGGCGAGCGGTGGGCGGCCTGGGGGCTTCGTGGGCACCGTCTTCGGCAGCGCGGGACTGGGGCCCACATGCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS CCA 72 bp | ACGAAGCCCCCAGGCCGCCCACCGCTCGCCCCTCCGTaGCCCAGCGTGAAGCCACCACTTCGCCCTGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: TKPPGRPPLAPP*PSVKPPLRPAE Trigger: CTCTGCAGGGCGAAGTGGTGGCTTCACGCTGGGCCACGGAGGGGCGAGCGGTGGGCGGCCTGGGGGCTTCGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS TCA 72 bp | CAGGCCGCCCACCGCTCGCCCCTCCGTGGCCCAGCGTaGAGCCACCACTTCGCCCTGCAGAGCTCAACGCCA | + |
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Preference number: 6 (lower is better) Translates to: QAAHRSPLRGPA*SHHFALQSSTP Trigger: TGGCGTTGAGCTCTGCAGGGCGAAGTGGTGGCTTCACGCTGGGCCACGGAGGGGCGAGCGGTGGGCGGCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS CAA 90 bp | TTTTTGGTTGTACCGCTGCTGCCTGAGGTTTTGGCCGGAGGATCCTaGAGCTCGCTGCCACAGCTACCCTTGGTCTTCACCTCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: FLVVPLLPEVLAGGS*SSLPQLPLVFTSRA Trigger: GGCCCTGGAGGTGAAGACCAAGGGTAGCTGTGGCAGCGAGCTCAAGGATCCTCCGGCCAAAACCTCAGGCAGCAGCGGTACAACCAAAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS TCA 72 bp | TCATCTGGAGGTCTTTTTGGTTGTACCGCTGCTGCCTaGGGTTTTGGCCGGAGGATCCTTGAGCTCGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SSGGLFGCTAAA*GFGRRILELAA Trigger: GGCAGCGAGCTCAAGGATCCTCCGGCCAAAACCTCAGGCAGCAGCGGTACAACCAAAAAGACCTCCAGATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS CAA 72 bp | GAGGTCTTTTTGGTTGTACCGCTGCTGCCTGAGGTTTaGGCCGGAGGATCCTTGAGCTCGCTGCCACAGCTA | + |
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Preference number: 6 (lower is better) Translates to: EVFLVVPLLPEV*AGGSLSSLPQL Trigger: TAGCTGTGGCAGCGAGCTCAAGGATCCTCCGGCCAAAACCTCAGGCAGCAGCGGTACAACCAAAAAGACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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| CDS GCA 72 bp | ACCAAAGCCCACACTGAAGCCAGCACCTCCTGGTCCTaGATTGGTACTGCTAATGACAGAAATGCTCACAGA | + |
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Preference number: 6 (lower is better) Translates to: TKAHTEASTSWS*IGTANDRNAHR Trigger: TCTGTGAGCATTTCTGTCATTAGCAGTACCAATGCAGGACCAGGAGGTGCTGGCTTCAGTGTGGGCTTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071104.6 |
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