Pregenerated sensors for KRT7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023039Ensembl transcript IDs: ENSMUST00000068904.9
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGCTCTGCTAACCATGCCTCCCCCACCCCCTACTTGGCCTTGCTaGCCGGGTTTCCAGTTTGAGGGCTGTGAGCTAGGGAGGGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: PALLTMPPPPPTWPC*PGFQFEGCELGREE Trigger: TTCCTCCCTCCCTAGCTCACAGCCCTCAAACTGGAAACCCGGGCAGCAAGGCCAAGTAGGGGGTGGGGGAGGCATGGTTAGCAGAGCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR GCA 90 bp | CCAGCTTCCCAGGGGCCGACTTCCACTGCCTGGGCTCCCTCTGCTTaGTGTGCTTGGCCTTTCCCTTCTAACAAAGCTCCTGCTCTGCTA | + |
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Preference number: 1 (lower is better) Translates to: PASQGPTSTAWAPSA*CAWPFPSNKAPALL Trigger: TAGCAGAGCAGGAGCTTTGTTAGAAGGGAAAGGCCAAGCACAGCAAGCAGAGGGAGCCCAGGCAGTGGAAGTCGGCCCCTGGGAAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR GCA 90 bp | TTCCACCAACAGCCTCTCCTGGGCTATCTTCAGAGACCCCAGCCCTaGCACACAGTGCCAAGCCTCAGGTTGTTCCCCGTGACCCAATCA | + |
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Preference number: 1 (lower is better) Translates to: FHQQPLLGYLQRPQP*HTVPSLRLFPVTQS Trigger: TGATTGGGTCACGGGGAACAACCTGAGGCTTGGCACTGTGTGGCAGGGCTGGGGTCTCTGAAGATAGCCCAGGAGAGGCTGTTGGTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR CCA 90 bp | CAGGGGCCGACTTCCACTGCCTGGGCTCCCTCTGCTTGCTGTGCTTaGCCTTTCCCTTCTAACAAAGCTCCTGCTCTGCTAACCATGCCT | + |
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Preference number: 1 (lower is better) Translates to: QGPTSTAWAPSACCA*PFPSNKAPALLTMP Trigger: AGGCATGGTTAGCAGAGCAGGAGCTTTGTTAGAAGGGAAAGGCCAAGCACAGCAAGCAGAGGGAGCCCAGGCAGTGGAAGTCGGCCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR CCA 90 bp | GTGATGGACAACATCCCAGCTTCCCAGGGGCCGACTTCCACTGCCTaGGCTCCCTCTGCTTGCTGTGCTTGGCCTTTCCCTTCTAACAAA | + |
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Preference number: 1 (lower is better) Translates to: VMDNIPASQGPTSTA*APSACCAWPFPSNK Trigger: TTTGTTAGAAGGGAAAGGCCAAGCACAGCAAGCAGAGGGAGCCCAGGCAGTGGAAGTCGGCCCCTGGGAAGCTGGGATGTTGTCCATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR TCA 90 bp | TTGCTGGGCCACCAAAGCCCAGGGCCTTGGAGAGCTGAATGTGTGTaGTCTCACTTCAAGACCATAGGCTGTCAACAGAGGGTGTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LLGHQSPGPWRAECV*SHFKTIGCQQRVWR Trigger: CCTCCACACCCTCTGTTGACAGCCTATGGTCTTGAAGTGAGATCACACACATTCAGCTCTCCAAGGCCCTGGGCTTTGGTGGCCCAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR TCA 90 bp | CTTGGGGAGTTTGCTGGGCCACCAAAGCCCAGGGCCTTGGAGAGCTaGATGTGTGTGATCTCACTTCAAGACCATAGGCTGTCAACAGAG | + |
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Preference number: 1 (lower is better) Translates to: LGEFAGPPKPRALES*MCVISLQDHRLSTE Trigger: CTCTGTTGACAGCCTATGGTCTTGAAGTGAGATCACACACATTCAGCTCTCCAAGGCCCTGGGCTTTGGTGGCCCAGCAAACTCCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR CCA 90 bp | AAGGGCCTGGATCACTTCTCTGTCTCTACCATAGCACACACAGCTTaGATTCTAGCAACACCTGGCTCTATTCCGCCTCTGGTGCTGTTC | + |
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Preference number: 1 (lower is better) Translates to: KGLDHFSVSTIAHTA*ILATPGSIPPLVLF Trigger: GAACAGCACCAGAGGCGGAATAGAGCCAGGTGTTGCTAGAATCCAAGCTGTGTGTGCTATGGTAGAGACAGAGAAGTGATCCAGGCCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR TCA 90 bp | CATAGGCTGTCAACAGAGGGTGTGGAGGTGCAAGTAGACCCTCCCTaGAAGGAAAAAGGTCTTCAACATCCACCTGTTACCACAACCTCC | + |
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Preference number: 1 (lower is better) Translates to: HRLSTEGVEVQVDPP*KEKGLQHPPVTTTS Trigger: GGAGGTTGTGGTAACAGGTGGATGTTGAAGACCTTTTTCCTTTCAGGGAGGGTCTACTTGCACCTCCACACCCTCTGTTGACAGCCTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR CCA 90 bp | CAATGTTCAATGTCTGAGATACACTCATACACTTTGGAGGAGCTGTaGGCTCCTCCAAAGGGCCTGGATCACTTCTCTGTCTCTACCATA | + |
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Preference number: 1 (lower is better) Translates to: QCSMSEIHSYTLEEL*APPKGLDHFSVSTI Trigger: TATGGTAGAGACAGAGAAGTGATCCAGGCCCTTTGGAGGAGCCCACAGCTCCTCCAAAGTGTATGAGTGTATCTCAGACATTGAACATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR CCA 90 bp | GGTACCAGGATAGTGAGGCGTTGCTGCGGCAGACCTGACGGTGTTGTGGGGAGGCCGACTTCCACTGCCTaGGCTCCCTCTGCTTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: GTRIVRRCCGRPDGVVGRPTSTA*APSACC Trigger: ACAGCAAGCAGAGGGAGCCCAGGCAGTGGAAGTCGG...CCTCCCCACAACACCGTCAGGTCTGCCGCAGCAACGCCTCACTATCCTGGTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR CAA 90 bp | AGTCCCAGACCTCAGGAAGGGCTGACTGTGGGTGTCTTGGGGAGTTaGCTGGGCCACCAAAGCCCAGGGCCTTGGAGAGCTGAATGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SPRPQEGLTVGVLGS*LGHQSPGPWRAECV Trigger: CACACATTCAGCTCTCCAAGGCCCTGGGCTTTGGTGGCCCAGCAAACTCCCCAAGACACCCACAGTCAGCCCTTCCTGAGGTCTGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCAGGAAGGGCTGACTGTGGGTGTCTTGGGGAGTTTGCTGGGCCACCAAAGCTCTGAACCCCAGTCCTaGGCACACTACCCGCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: PQEGLTVGVLGSLLGHQSSEPQS*AHYPLC Trigger: ACAGAGCGGGTAGTGTGCTCAGGACTGGGGTTCAGA...GCTTTGGTGGCCCAGCAAACTCCCCAAGACACCCACAGTCAGCCCTTCCTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR CAA 90 bp | AGAACACAAAGTCCCAGACCTCAGGAAGGGCTGACTGTGGGTGTCTaGGGGAGTTTGCTGGGCCACCAAAGCCCAGGGCCTTGGAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: RTQSPRPQEGLTVGV*GSLLGHQSPGPWRA Trigger: AGCTCTCCAAGGCCCTGGGCTTTGGTGGCCCAGCAAACTCCCCAAGACACCCACAGTCAGCCCTTCCTGAGGTCTGGGACTTTGTGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGAGTCAGGATGCCCTGGGGACTTGGGCACTTTTGGCTTCTGTTGGACAAGCCAAGGTGGCACCATaGATGGGGGTCCAGCACCTT | + |
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Preference number: 2 (lower is better) Translates to: ALSQDALGTWALLASVGQAKVAP*MGVQHL Trigger: AAGGTGCTGGACCCCCATCCATGGTGCCACCTTGGC...TTGTCCAACAGAAGCCAAAAGTGCCCAAGTCCCCAGGGCATCCTGACTCAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCTCTGAGTCAGGATGCCCTGGGGACTTGGGCACTTTTGGCTTCTGTTGGTCAGAGAGGTGGACCTaGGACTCCTACACCCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: GSSESGCPGDLGTFGFCWSERWT*DSYTLD Trigger: ATCAAGGGTGTAGGAGTCTCAGGTCCACCTCTCTGA...CCAACAGAAGCCAAAAGTGCCCAAGTCCCCAGGGCATCCTGACTCAGAGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR GCA 90 bp | TCCACTTCCTACCTGCCCTGCCCCATACCATGCCCAACTTCAATACTCCTTCCTCTTCCACCCCTACCCTaGAGGCCTCAGACTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: STSYLPCPIPCPTSILLPLPPLP*RPQTQR Trigger: TCTCTGAGTCTGAGGCCTGCAGGGTAGGGGTGGAAG...AGGAAGGAGTATTGAAGTTGGGCATGGTATGGGGCAGGGCAGGTAGGAAGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR CCA 90 bp | CATACACTTTGGAGGAGCTGTGGGCTCCTCCAAAGGGCCTGGATCACTTCTCTGGAACCAGCTCCAGCCTaGATAAGAGCCAAGGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: HTLWRSCGLLQRAWITSLEPAPA*IRAKVA Trigger: TGCCACCTTGGCTCTTATCCAGGCTGGAGCTGGTTC...CAGAGAAGTGATCCAGGCCCTTTGGAGGAGCCCACAGCTCCTCCAAAGTGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGAGCCTCCTAATACACAGAACCACAAAGGCTCAGAGAGGTGGACCTGAGTCTTGGGGAGTTTGCTaGGCCACCAAAGCCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: VESLLIHRTTKAQRGGPESWGVC*ATKAQG Trigger: GCCCTGGGCTTTGGTGGCCCAGCAAACTCCCCAAGA...CTCAGGTCCACCTCTCTGAGCCTTTGTGGTTCTGTGTATTAGGAGGCTCTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR CCA 90 bp | GAGACCTCCAACCAGCCCTTGAAATACACTCTGCCCTGGCATAAAACCCTCACTTCTCAGGAGAGGCACTaGAACCAGCTCCAGCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: ETSNQPLKYTLPWHKTLTSQERH*NQLQPG Trigger: TCCAGGCTGGAGCTGGTTCCAGTGCCTCTCCTGAGA...AGTGAGGGTTTTATGCCAGGGCAGAGTGTATTTCAAGGGCTGGTTGGAGGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR CAA 90 bp | TGGTACTGGCAAATTCTGTTGTACACAGCTAAACACTGTGGTCTCTaGCTACAGCTGAGCTGCACTTCCACCAACAGCCTCTCCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: WYWQILLYTAKHCGL*LQLSCTSTNSLSWA Trigger: AGCCCAGGAGAGGCTGTTGGTGGAAGTGCAGCTCAGCTGTAGCAAGAGACCACAGTGTTTAGCTGTGTACAACAGAATTTGCCAGTACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR CAA 90 bp | AAAGGGCCTGGATCACTTCTCTGTCTCTACCATAGCACACACAGCTaGGATTCTAGCAACACCTGGCTCTATTCCGCCTCTGGTGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: KGPGSLLCLYHSTHS*DSSNTWLYSASGAV Trigger: AACAGCACCAGAGGCGGAATAGAGCCAGGTGTTGCTAGAATCCAAGCTGTGTGTGCTATGGTAGAGACAGAGAAGTGATCCAGGCCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR TCA 90 bp | CCCATTCCTCCATCCAAGGATCCAGGAACAAACCTTCCTCAACACACACACACACTCGGGACAGGGACATaGGATGGACAAAAGGGTATG | + |
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Preference number: 2 (lower is better) Translates to: PIPPSKDPGTNLPQHTHTLGTGT*DGQKGM Trigger: CATACCCTTTTGTCCATCTCATGTCCCTGTCCCGAG...TGTGTGTGTGTGTTGAGGAAGGTTTGTTCCTGGATCCTTGGATGGAGGAATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR GCA 90 bp | GATCACTTCTCTGTCTCTACCATAGCACACACAGCTTGGATTCTAGCAACACCTTGCCTGGGCTCCCTCTaGTTGCTGTGCTTGGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: DHFSVSTIAHTAWILATPCLGSL*LLCLAF Trigger: AAAGGCCAAGCACAGCAAGCAGAGGGAGCCCAGGCA...AGGTGTTGCTAGAATCCAAGCTGTGTGTGCTATGGTAGAGACAGAGAAGTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR GCA 90 bp | GATCACTTCTCTGTCTCTACCATAGCACACACAGCTTGGATTCTAGCAACACCTTTGCTACAGCTGAGCTaGACTTCCACCAACAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: DHFSVSTIAHTAWILATPLLQLS*TSTNSL Trigger: GAGGCTGTTGGTGGAAGTGCAGCTCAGCTGTAGCAA...AGGTGTTGCTAGAATCCAAGCTGTGTGTGCTATGGTAGAGACAGAGAAGTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR GCA 90 bp | TTATTTCAAGAGAGAAGAACCAGGGACAGTCATAATCAATTCTATGCAAAACCACAGAGACCCCAGCCCTaGCACACAGTGCCAAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LFQERRTRDSHNQFYAKPQRPQP*HTVPSL Trigger: GAGGCTTGGCACTGTGTGGCAGGGCTGGGGTCTCTG...TGGTTTTGCATAGAATTGATTATGACTGTCCCTGGTTCTTCTCTCTTGAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR CCA 90 bp | AAATCCCAGCAACCACATGGTGGCTTACAATCATCCATAATGAGACCTGATGCCGTCATCCTATGGTACTaGCAAATTCTGTTGTACACA | + |
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Preference number: 2 (lower is better) Translates to: KSQQPHGGLQSSIMRPDAVILWY*QILLYT Trigger: TGTGTACAACAGAATTTGCCAGTACCATAGGATGAC...GGCATCAGGTCTCATTATGGATGATTGTAAGCCACCATGTGGTTGCTGGGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR GCA 90 bp | TTATTTCAAGAGAGAAGAACCAGGGACAGTCATAATCAATTCTATGCAAAACCACCCTGCCCCATACCATaGCCAACTTCAATACTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LFQERRTRDSHNQFYAKPPCPIP*PTSILL Trigger: AAGGAGTATTGAAGTTGGGCATGGTATGGGGCAGGG...TGGTTTTGCATAGAATTGATTATGACTGTCCCTGGTTCTTCTCTCTTGAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR CCA 90 bp | TTATTTCAAGAGAGAAGAACCAGGGACAGTCATAATCAATTCTATGCAAAACCAAAATACACTCTGCCCTaGCATAAAACCCTCACTACA | + |
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Preference number: 2 (lower is better) Translates to: LFQERRTRDSHNQFYAKPKYTLP*HKTLTT Trigger: TGTAGTGAGGGTTTTATGCCAGGGCAGAGTGTATTT...TGGTTTTGCATAGAATTGATTATGACTGTCCCTGGTTCTTCTCTCTTGAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR GCA 72 bp | GGACAACATCCCAGCTTCCCAGGGGCCGACTTCCACTaGCTGGGCTCCCTCTGCTTGCTGTGCTTGGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: GQHPSFPGADFH*LGSLCLLCLAF Trigger: AAAGGCCAAGCACAGCAAGCAGAGGGAGCCCAGGCAGTGGAAGTCGGCCCCTGGGAAGCTGGGATGTTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR CCA 72 bp | AACATCCCAGCTTCCCAGGGGCCGACTTCCACTGCCTaGGCTCCCTCTGCTTGCTGTGCTTGGCCTTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: NIPASQGPTSTA*APSACCAWPFP Trigger: AGGGAAAGGCCAAGCACAGCAAGCAGAGGGAGCCCAGGCAGTGGAAGTCGGCCCCTGGGAAGCTGGGATGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR GCA 72 bp | CTGCTAACCATGCCTCCCCCACCCCCTACTTGGCCTTaGTGCCCGGGTTTCCAGTTTGAGGGCTGTGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: LLTMPPPPPTWP*CPGFQFEGCEL Trigger: TAGCTCACAGCCCTCAAACTGGAAACCCGGGCAGCAAGGCCAAGTAGGGGGTGGGGGAGGCATGGTTAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR CAA 90 bp | GGCAGCTCTGAGTCAGGATGCCCTGGGGACTTGGGCACTTTTGGCTTCTGTTGGCTGACTGTGGGTGTCTaGGGGAGTTTGCTGGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: GSSESGCPGDLGTFGFCWLTVGV*GSLLGH Trigger: GTGGCCCAGCAAACTCCCCAAGACACCCACAGTCAG...CCAACAGAAGCCAAAAGTGCCCAAGTCCCCAGGGCATCCTGACTCAGAGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR GCA 72 bp | CAGGGGCCGACTTCCACTGCCTGGGCTCCCTCTGCTTaGTGTGCTTGGCCTTTCCCTTCTAACAAAGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: QGPTSTAWAPSA*CAWPFPSNKAP Trigger: AGGAGCTTTGTTAGAAGGGAAAGGCCAAGCACAGCAAGCAGAGGGAGCCCAGGCAGTGGAAGTCGGCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR CAA 90 bp | GGCAGCTCTGAGTCAGGATGCCCTGGGGACTTGGGCACTTTTGGCTTCTGTTGGTCAGAGACCAGACATTaGGAAGCCCCAGCACAGAGG | + |
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Preference number: 3 (lower is better) Translates to: GSSESGCPGDLGTFGFCWSETRH*EAPAQR Trigger: CCTCTGTGCTGGGGCTTCCAAATGTCTGGTCTCTGA...CCAACAGAAGCCAAAAGTGCCCAAGTCCCCAGGGCATCCTGACTCAGAGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR CCA 72 bp | ATGATCTCAGGAGAGGCACTGGAACCAGCTCCAGCCTaGATAAGAGCCAAGGTGGCACCATGGATGGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: MISGEALEPAPA*IRAKVAPWMGV Trigger: GACCCCCATCCATGGTGCCACCTTGGCTCTTATCCAGGCTGGAGCTGGTTCCAGTGCCTCTCCTGAGATCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR TCA 72 bp | GTATCAGAACACAAAGTCCCAGACCTCAGGAAGGGCTaGCTGTGGGTGTCTTGGGGAGTTTGCTGGGCCACC | + |
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Preference number: 3 (lower is better) Translates to: VSEHKVPDLRKG*LWVSWGVCWAT Trigger: GGTGGCCCAGCAAACTCCCCAAGACACCCACAGTCAGCCCTTCCTGAGGTCTGGGACTTTGTGTTCTGATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR TCA 72 bp | CCTGCCACACAGTGCCAAGCCTCAGGTTGTTCCCCGTaGCCCAATCATGCCTTCAAAACTAGCACCACCTGG | + |
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Preference number: 3 (lower is better) Translates to: PATQCQASGCSP*PNHAFKTSTTW Trigger: CCAGGTGGTGCTAGTTTTGAAGGCATGATTGGGTCACGGGGAACAACCTGAGGCTTGGCACTGTGTGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR CCA 72 bp | GGCTCGGGACAGGGACATGAGATGGACAAAAGGGTATaGGGGGTCTCTCCAAGCCCACAGCTTGGTTGTATG | + |
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Preference number: 3 (lower is better) Translates to: GSGQGHEMDKRV*GVSPSPQLGCM Trigger: CATACAACCAAGCTGTGGGCTTGGAGAGACCCCCCATACCCTTTTGTCCATCTCATGTCCCTGTCCCGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR TCA 72 bp | TGGTACCAGGATAGTGAGGCGTTGCTGCGGCAGACCTaGCGGTGTTGTGGGGAGGATTGTGGAACTTTAAGC | + |
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Preference number: 3 (lower is better) Translates to: WYQDSEALLRQT*RCCGEDCGTLS Trigger: GCTTAAAGTTCCACAATCCTCCCCACAACACCGTCAGGTCTGCCGCAGCAACGCCTCACTATCCTGGTACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR-3UTR CAA 90 bp | CAACACCTGGCTCTATTCCGCCTCTGGTGCTGTTCTTGGTGGTCATCCTATGGTACCTCCAACCAGCCCTaGAAATACACTCTGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: QHLALFRLWCCSWWSSYGTSNQP*KYTLPW Trigger: CCAGGGCAGAGTGTATTTCAAGGGCTGGTTGGAGGT...ACCATAGGATGACCACCAAGAACAGCACCAGAGGCGGAATAGAGCCAGGTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR TCA 72 bp | TTTGCTGGGCCACCAAAGCCCAGGGCCTTGGAGAGCTaGATGTGTGTGATCTCACTTCAAGACCATAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: FAGPPKPRALES*MCVISLQDHRL Trigger: CAGCCTATGGTCTTGAAGTGAGATCACACACATTCAGCTCTCCAAGGCCCTGGGCTTTGGTGGCCCAGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR TCA 72 bp | CACCAAAGCCCAGGGCCTTGGAGAGCTGAATGTGTGTaGTCTCACTTCAAGACCATAGGCTGTCAACAGAGG | + |
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Preference number: 3 (lower is better) Translates to: HQSPGPWRAECV*SHFKTIGCQQR Trigger: CCTCTGTTGACAGCCTATGGTCTTGAAGTGAGATCACACACATTCAGCTCTCCAAGGCCCTGGGCTTTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR TCA 72 bp | TGCAGGCCTCAGACTCAGAGACCTCCAACCAGCCCTTaGAATACACTCTGCCCTGGCATAAAACCCTCACTA | + |
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Preference number: 3 (lower is better) Translates to: CRPQTQRPPTSP*NTLCPGIKPSL Trigger: TAGTGAGGGTTTTATGCCAGGGCAGAGTGTATTTCAAGGGCTGGTTGGAGGTCTCTGAGTCTGAGGCCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR GCA 72 bp | ACAGCTAAACACTGTGGTCTCTTGCTACAGCTGAGCTaGACTTCCACCAACAGCCTCTCCTGGGCTATCTTC | + |
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Preference number: 3 (lower is better) Translates to: TAKHCGLLLQLS*TSTNSLSWAIF Trigger: GAAGATAGCCCAGGAGAGGCTGTTGGTGGAAGTGCAGCTCAGCTGTAGCAAGAGACCACAGTGTTTAGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR CCA 72 bp | ATGTCCCCATCCTCTGTTCCCTGTGCCACCCACACCTaGCTAGCCAATGAAGCTCACTCACAGAGGATTTTT | + |
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Preference number: 3 (lower is better) Translates to: MSPSSVPCATHT*LANEAHSQRIF Trigger: AAAAATCCTCTGTGAGTGAGCTTCATTGGCTAGCCAGGTGTGGGTGGCACAGGGAACAGAGGATGGGGACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR CCA 72 bp | ATGTCTGAGATACACTCATACACTTTGGAGGAGCTGTaGGCTCCTCCAAAGGGCCTGGATCACTTCTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: MSEIHSYTLEEL*APPKGLDHFSV Trigger: GACAGAGAAGTGATCCAGGCCCTTTGGAGGAGCCCACAGCTCCTCCAAAGTGTATGAGTGTATCTCAGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR CCA 72 bp | CACCTGGCTCTATTCCGCCTCTGGTGCTGTTCTTGGTaGTCATCCTATGGTACTGGCAAATTCTGTTGTACA | + |
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Preference number: 3 (lower is better) Translates to: HLALFRLWCCSW*SSYGTGKFCCT Trigger: TGTACAACAGAATTTGCCAGTACCATAGGATGACCACCAAGAACAGCACCAGAGGCGGAATAGAGCCAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| 3UTR CCA 72 bp | GATCACTTCTCTGTCTCTACCATAGCACACACAGCTTaGATTCTAGCAACACCTGGCTCTATTCCGCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: DHFSVSTIAHTA*ILATPGSIPPL Trigger: CAGAGGCGGAATAGAGCCAGGTGTTGCTAGAATCCAAGCTGTGTGTGCTATGGTAGAGACAGAGAAGTGATC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| 3UTR CCA 72 bp | CTCAATGTTCAATGTCTGAGATACACTCATACACTTTaGAGGAGCTGTGGGCTCCTCCAAAGGGCCTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: LNVQCLRYTHTL*RSCGLLQRAWI Trigger: GATCCAGGCCCTTTGGAGGAGCCCACAGCTCCTCCAAAGTGTATGAGTGTATCTCAGACATTGAACATTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| 3UTR TCA 72 bp | ACCACATGGTGGCTTACAATCATCCATAATGAGACCTaGTGCCCTCTTCTGGGGTGTCTGAAGACAGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: TTWWLTIIHNET*CPLLGCLKTAT Trigger: TGTAGCTGTCTTCAGACACCCCAGAAGAGGGCATCAGGTCTCATTATGGATGATTGTAAGCCACCATGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| 3UTR-3UTR CAA 90 bp | TTATTTCAAGAGAGAAGAACCAGGGACAGTCATAATCAATTCTATGCAAAACCACTGGGCTCCCTCTGCTaGCTGTGCTTGGCCTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LFQERRTRDSHNQFYAKPLGSLC*LCLAFP Trigger: GGGAAAGGCCAAGCACAGCAAGCAGAGGGAGCCCAG...TGGTTTTGCATAGAATTGATTATGACTGTCCCTGGTTCTTCTCTCTTGAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| 3UTR-3UTR CAA 90 bp | GATCACTTCTCTGTCTCTACCATAGCACACACAGCTTGGATTCTAGCAACACCTCACTTTTGGCTTCTGTaGGACAAATTGGCCCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DHFSVSTIAHTAWILATPHFWLL*DKLAPE Trigger: TTCTGGGGCCAATTTGTCCAACAGAAGCCAAAAGTG...AGGTGTTGCTAGAATCCAAGCTGTGTGTGCTATGGTAGAGACAGAGAAGTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| 3UTR CCA 72 bp | CCTCTGGTGCTGTTCTTGGTGGTCATCCTATGGTACTaGCAAATTCTGTTGTACACAGCTAAACACTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PLVLFLVVILWY*QILLYTAKHCG Trigger: ACCACAGTGTTTAGCTGTGTACAACAGAATTTGCCAGTACCATAGGATGACCACCAAGAACAGCACCAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| 3UTR CCA 72 bp | ATTCCGCCTCTGGTGCTGTTCTTGGTGGTCATCCTATaGTACTGGCAAATTCTGTTGTACACAGCTAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: IPPLVLFLVVIL*YWQILLYTAKH Trigger: GTGTTTAGCTGTGTACAACAGAATTTGCCAGTACCATAGGATGACCACCAAGAACAGCACCAGAGGCGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| 3UTR CAA 72 bp | AGTCCCAGACCTCAGGAAGGGCTGACTGTGGGTGTCTaGGGGAGTTTGCTGGGCCACCAAAGCCCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPRPQEGLTVGV*GSLLGHQSPGP Trigger: AGGCCCTGGGCTTTGGTGGCCCAGCAAACTCCCCAAGACACCCACAGTCAGCCCTTCCTGAGGTCTGGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR TCA 90 bp | CAGACCTCAGGAAGGGCTGACTGTGGGTGTCTTGGGGAGTTTGCTGGGCCACCACTGGCTGCTCTTGGCTaGCTTCTGTTCCTGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTSGRADCGCLGEFAGPPLAALG*LLFLQQ Trigger: CTGCTGCAGGAACAGAAGTCAGCCAAGAGCAGCCAG...TGGTGGCCCAGCAAACTCCCCAAGACACCCACAGTCAGCCCTTCCTGAGGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR GCA 90 bp | GCTCTGAGTCAGGATGCCCTGGGGACTTGGGCACTTTTGGCTTCTGTTGGACAACGGCCCCCATCCAGCTaGAGTGTCTCGAGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSQDALGTWALLASVGQRPPSS*SVSSCC Trigger: GCAGCAGCTCGAGACACTGCAGCTGGATGGGGGCCG...TTGTCCAACAGAAGCCAAAAGTGCCCAAGTCCCCAGGGCATCCTGACTCAGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR GCA 90 bp | CAGACCTCAGGAAGGGCTGACTGTGGGTGTCTTGGGGAGTTTGCTGGGCCACCATCTCATTCCGGGTGTTaGGGAGGTCATCCCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTSGRADCGCLGEFAGPPSHSGC*GGHPRA Trigger: AGCACGGGGATGACCTCCGCAACACCCGGAATGAGA...TGGTGGCCCAGCAAACTCCCCAAGACACCCACAGTCAGCCCTTCCTGAGGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR CCA 90 bp | GGTACCAGGATAGTGAGGCGTTGCTGCGGCAGACCTGACGGTGTTGTGGGGAGGAAGATTCGGGGAAGCTaGCTGCTCTTGGCTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTRIVRRCCGRPDGVVGRKIRGS*LLLADF Trigger: GAAGTCAGCCAAGAGCAGCCAGCTTCCCCGAATCTT...CCTCCCCACAACACCGTCAGGTCTGCCGCAGCAACGCCTCACTATCCTGGTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR TCA 90 bp | CTCAGGAGAGGCACTGGAACCAGCTCCAGCCTGGATAAGAGCCAAGGTGGCACCGCTAACTCTGTCTCGTaGAGGGTCTTGAGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRRGTGTSSSLDKSQGGTANSVS*RVLRKL Trigger: CAACTTCCTCAAGACCCTTCACGAGACAGAGTTAGC...GGTGCCACCTTGGCTCTTATCCAGGCTGGAGCTGGTTCCAGTGCCTCTCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGCTCTGAGTCAGGATGCCCTGGGGACTTGGGCACTTTTGGCTTCTGTTGGGAAGCTGGCTGCTCTTaGCTGACTTCTGTTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSESGCPGDLGTFGFCWEAGCS*LTSVPA Trigger: TGCAGGAACAGAAGTCAGCCAAGAGCAGCCAGCTTC...CCAACAGAAGCCAAAAGTGCCCAAGTCCCCAGGGCATCCTGACTCAGAGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR CCA 90 bp | GAGACCTCCAACCAGCCCTTGAAATACACTCTGCCCTGGCATAAAACCCTCACTTCCTGGCGCACCTGCTaGATGGTGGGATCGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETSNQPLKYTLPWHKTLTSWRTC*MVGSMS Trigger: GGACATCGATCCCACCATCCAGCAGGTGCGCCAGGA...AGTGAGGGTTTTATGCCAGGGCAGAGTGTATTTCAAGGGCTGGTTGGAGGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| 3UTR CAA 72 bp | GCTCTGAGTCAGGATGCCCTGGGGACTTGGGCACTTTaGGCTTCTGTTGGACAAATTGGCCCCAGAACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALSQDALGTWAL*ASVGQIGPRTL Trigger: AAGGGTTCTGGGGCCAATTTGTCCAACAGAAGCCAAAAGTGCCCAAGTCCCCAGGGCATCCTGACTCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR CCA 90 bp | AGGACCTCTTGTAAGTATCAGAACACAAAGTCCCAGACCTCAGGAAGGGCTGACCCGTGCTTCCCAGCCTaGGCCTGGAGTGTCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RTSCKYQNTKSQTSGRADPCFPA*AWSVSN Trigger: GTTTGAGACACTCCAGGCCCAGGCTGGGAAGCACGG...GTCAGCCCTTCCTGAGGTCTGGGACTTTGTGTTCTGATACTTACAAGAGGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| 3UTR CAA 72 bp | CTGCAGGCCTCAGACTCAGAGACCTCCAACCAGCCCTaGAAATACACTCTGCCCTGGCATAAAACCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LQASDSETSNQP*KYTLPWHKTLT Trigger: AGTGAGGGTTTTATGCCAGGGCAGAGTGTATTTCAAGGGCTGGTTGGAGGTCTCTGAGTCTGAGGCCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR GCA 90 bp | TCCACTTCCTACCTGCCCTGCCCCATACCATGCCCAACTTCAATACTCCTTCCTTTCGGGGAAGCTGGCTaGTCTTGGCTGACTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: STSYLPCPIPCPTSILLPFGEAG*SWLTSV Trigger: AACAGAAGTCAGCCAAGAGCAGCCAGCTTCCCCGAA...AGGAAGGAGTATTGAAGTTGGGCATGGTATGGGGCAGGGCAGGTAGGAAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR CCA 90 bp | AGGCCCTTTATTAAAGCCAACAGCAGTTTCAGACTATCTTCCAGGCTCGGGACAGGCGCACCTGCTGGATaGTGGGATCGATGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RPFIKANSSFRLSSRLGTGAPAG*WDRCPH Trigger: GTGTGGACATCGATCCCACCATCCAGCAGGTGCGCC...TGTCCCGAGCCTGGAAGATAGTCTGAAACTGCTGTTGGCTTTAATAAAGGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR GCA 90 bp | CAACACCTGGCTCTATTCCGCCTCTGGTGCTGTTCTTGGTGGTCATCCTATGGTTCTGAGATCTGCGACTaGAGCTCTGCTAACTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QHLALFRLWCCSWWSSYGSEICD*SSANSV Trigger: GACAGAGTTAGCAGAGCTGCAGTCGCAGATCTCAGA...ACCATAGGATGACCACCAAGAACAGCACCAGAGGCGGAATAGAGCCAGGTGTTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR TCA 90 bp | AGGCCCTTTATTAAAGCCAACAGCAGTTTCAGACTATCTTCCAGGCTCGGGACATCCCCCTGCTTAGCATaGGCATCCTTGATTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPFIKANSSFRLSSRLGTSPCLA*ASLIAS Trigger: GCTGGCAATCAAGGATGCTCATGCTAAGCAGGGGGA...TGTCCCGAGCCTGGAAGATAGTCTGAAACTGCTGTTGGCTTTAATAAAGGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR GCA 90 bp | AGGACCTCTTGTAAGTATCAGAACACAAAGTCCCAGACCTCAGGAAGGGCTGACTCTTCCACCACATCCTaGATGTTCCGCAGTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RTSCKYQNTKSQTSGRADSSTTS*MFRSST Trigger: GGTGGAACTGCGGAACATGCAGGATGTGGTGGAAGA...GTCAGCCCTTCCTGAGGTCTGGGACTTTGTGTTCTGATACTTACAAGAGGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR GCA 90 bp | AGGCCCTTTATTAAAGCCAACAGCAGTTTCAGACTATCTTCCAGGCTCGGGACAGTGTCAATCTCTGCCTaGAGCCTCTGGATAGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RPFIKANSSFRLSSRLGTVSISA*SLWIER Trigger: CCGCTCTATCCAGAGGCTGCAGGCAGAGATTGACAC...TGTCCCGAGCCTGGAAGATAGTCTGAAACTGCTGTTGGCTTTAATAAAGGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR GCA 90 bp | TGTGTGATCTCACTTCAAGACCATAGGCTGTCAACAGAGGGTGTGGAGGTGCAACAAGGTGTCAATCTCTaGCTGCAGCCTCTGGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: CVISLQDHRLSTEGVEVQQGVNL*LQPLDR Trigger: TCTATCCAGAGGCTGCAGGCAGAGATTGACACCTTG...TTGCACCTCCACACCCTCTGTTGACAGCCTATGGTCTTGAAGTGAGATCACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| 3UTR CAA 72 bp | GTTGCTGCGGCAGACCTGACGGTGTTGTGGGGAGGATaGTGGAACTTTAAGCTAGAAAAGCCATTAAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: VAAADLTVLWGG*WNFKLEKPLSV Trigger: AACGCTTAATGGCTTTTCTAGCTTAAAGTTCCACAATCCTCCCCACAACACCGTCAGGTCTGCCGCAGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| 3UTR CAA 72 bp | GGATCACTTCTCTGTCTCTACCATAGCACACACAGCTaGGATTCTAGCAACACCTGGCTCTATTCCGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLLCLYHSTHS*DSSNTWLYSAS Trigger: AGAGGCGGAATAGAGCCAGGTGTTGCTAGAATCCAAGCTGTGTGTGCTATGGTAGAGACAGAGAAGTGATCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR CCA 90 bp | ATGGCCTGTTCTGTAGGAGTTTCAAAGGTAAGAATGTTGAGAGTGGTACAGACCTTCCCAGCCTGGGCCTaGAGTGTCTCAAACTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MACSVGVSKVRMLRVVQTFPAWA*SVSNLV Trigger: GACCAAGTTTGAGACACTCCAGGCCCAGGCTGGGAA...GGTCTGTACCACTCTCAACATTCTTACCTTTGAAACTCCTACAGAACAGGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| 3UTR CAA 72 bp | CAAATTCTGTTGTACACAGCTAAACACTGTGGTCTCTaGCTACAGCTGAGCTGCACTTCCACCAACAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QILLYTAKHCGL*LQLSCTSTNSL Trigger: GAGGCTGTTGGTGGAAGTGCAGCTCAGCTGTAGCAAGAGACCACAGTGTTTAGCTGTGTACAACAGAATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| 3UTR CAA 72 bp | ACTCAATGTTCAATGTCTGAGATACACTCATACACTTaGGAGGAGCTGTGGGCTCCTCCAAAGGGCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TQCSMSEIHSYT*EELWAPPKGLD Trigger: ATCCAGGCCCTTTGGAGGAGCCCACAGCTCCTCCAAAGTGTATGAGTGTATCTCAGACATTGAACATTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR TCA 90 bp | TTATTTCAAGAGAGAAGAACCAGGGACAGTCATAATCAATTCTATGCAAAACCAGGCGCCAGCAAGCTCTaGTTGATGGTGATCTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LFQERRTRDSHNQFYAKPGASKL*LMVISR Trigger: CCGCGAGATCACCATCAATCAGAGCTTGCTGGCGCC...TGGTTTTGCATAGAATTGATTATGACTGTCCCTGGTTCTTCTCTCTTGAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCTGTAGGAGTTTCAAAGGTAAGAATGTTGAGAGTGGTACAGACCATGGAGATGAGCATCCTTGATTaGCAGCTCCCCTTGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSVGVSKVRMLRVVQTMEMSILD*QLPLFL Trigger: GAGGAACAAGGGGAGCTGGCAATCAAGGATGCTCAT...CTCCATGGTCTGTACCACTCTCAACATTCTTACCTTTGAAACTCCTACAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR CCA 90 bp | TGTTCTGTAGGAGTTTCAAAGGTAAGAATGTTGAGAGTGGTACAGACCATGGAGGTCTCAAACTTGGTCTaGTACCAAGCTTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSVGVSKVRMLRVVQTMEVSNLV*YQASAS Trigger: AGAGGCTGAAGCTTGGTACCAGACCAAGTTTGAGAC...CTCCATGGTCTGTACCACTCTCAACATTCTTACCTTTGAAACTCCTACAGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| 3UTR CAA 72 bp | TTCTTGGTGGTCATCCTATGGTACTGGCAAATTCTGTaGTACACAGCTAAACACTGTGGTCTCTTGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: FLVVILWYWQIL*YTAKHCGLLLQ Trigger: CTGTAGCAAGAGACCACAGTGTTTAGCTGTGTACAACAGAATTTGCCAGTACCATAGGATGACCACCAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR TCA 90 bp | TTATTTCAAGAGAGAAGAACCAGGGACAGTCATAATCAATTCTATGCAAAACCACTCAGCCCAGCAATCTaGGCCTCAAAGATTCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFQERRTRDSHNQFYAKPLSPAI*ASKIRG Trigger: TCCCCGAATCTTTGAGGCTCAGATTGCTGGGCTGAG...TGGTTTTGCATAGAATTGATTATGACTGTCCCTGGTTCTTCTCTCTTGAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS GCA 90 bp | CGGCCACACGAGGCCTTGATGAGCCCAGGCCATAGAGGCTCCTGCTaGCGAAGCTGGCGCGGCCCGAGCTCAGGCGCACCTGAGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RPHEALMSPGHRGSC*RSWRGPSSGAPEPR Trigger: GCGGGGCTCAGGTGCGCCTGAGCTCGGGCCGCGCCAGCTTCGGCAGCAGGAGCCTCTATGGCCTGGGCTCATCAAGGCCTCGTGTGGCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS GCA 90 bp | GCACGGCCACACGAGGCCTTGATGAGCCCAGGCCATAGAGGCTCCTaGTGCCGAAGCTGGCGCGGCCCGAGCTCAGGCGCACCTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ARPHEALMSPGHRGS*CRSWRGPSSGAPEP Trigger: GGGCTCAGGTGCGCCTGAGCTCGGGCCGCGCCAGCTTCGGCAGCAGGAGCCTCTATGGCCTGGGCTCATCAAGGCCTCGTGTGGCCGTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR CAA 90 bp | GGTACCAGGATAGTGAGGCGTTGCTGCGGCAGACCTGACGGTGTTGTGGGGAGGCTGAAGCTCAGAGCATaGCTTCCCATGGTTCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GTRIVRRCCGRPDGVVGRLKLRA*LPMVPP Trigger: CGGAGGAACCATGGGAAGCAATGCTCTGAGCTTCAG...CCTCCCCACAACACCGTCAGGTCTGCCGCAGCAACGCCTCACTATCCTGGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR CAA 90 bp | CCTACCCTGCAGGCCTCAGACTCAGAGACCTCCAACCAGCCCTTGAAATACACTATGTCCAGCGCCAGCTaGGTGTTCAGGAGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PTLQASDSETSNQPLKYTMSSAS*VFRSSW Trigger: CCAGGAGCTCCTGAACACCAAGCTGGCGCTGGACAT...AGTGTATTTCAAGGGCTGGTTGGAGGTCTCTGAGTCTGAGGCCTGCAGGGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR CAA 90 bp | CAGACCTCAGGAAGGGCTGACTGTGGGTGTCTTGGGGAGTTTGCTGGGCCACCAAGGGTCTTGAGGAAGTaGATCTCATCCTGCAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: QTSGRADCGCLGEFAGPPRVLRK*ISSCRL Trigger: CAGTCTGCAGGATGAGATCAACTTCCTCAAGACCCT...TGGTGGCCCAGCAAACTCCCCAAGACACCCACAGTCAGCCCTTCCTGAGGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR CAA 90 bp | GTTGAGAGCCTCCTAATACACAGAACCACAAAGGCTCAGAGAGGTGGACCTGAGTGCAGACTGTCCGCCTaGGCCTCCAACTCCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VESLLIHRTTKAQRGGPECRLSA*ASNSTL Trigger: CAAGGTGGAGTTGGAGGCCAAGGCGGACAGTCTGCA...CTCAGGTCCACCTCTCTGAGCCTTTGTGGTTCTGTGTATTAGGAGGCTCTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR CAA 90 bp | TGTGTGATCTCACTTCAAGACCATAGGCTGTCAACAGAGGGTGTGGAGGTGCAAGGAAGCTGGCTGCTCTaGGCTGACTTCTGTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CVISLQDHRLSTEGVEVQGSWLL*ADFCSC Trigger: GCAGGAACAGAAGTCAGCCAAGAGCAGCCAGCTTCC...TTGCACCTCCACACCCTCTGTTGACAGCCTATGGTCTTGAAGTGAGATCACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR CAA 90 bp | TCCACTTCCTACCTGCCCTGCCCCATACCATGCCCAACTTCAATACTCCTTCCTGCAGCCGTGCGTCGGTaGATCTCCTCTTCATACTTA | + |
|
Preference number: 5 (lower is better) Translates to: STSYLPCPIPCPTSILLPAAVRR*ISSSYL Trigger: TAAGTATGAAGAGGAGATCAACCGACGCACGGCTGC...AGGAAGGAGTATTGAAGTTGGGCATGGTATGGGGCAGGGCAGGTAGGAAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR CAA 90 bp | CCCATTCCTCCATCCAAGGATCCAGGAACAAACCTTCCTCAACACACACACACAATAAGCTTGCCACCATaGCCCCCAGTGGAATTCACA | + |
|
Preference number: 5 (lower is better) Translates to: PIPPSKDPGTNLPQHTHTISLPP*PPVEFT Trigger: TGTGAATTCCACTGGGGGCAATGGTGGCAAGCTTAT...TGTGTGTGTGTGTTGAGGAAGGTTTGTTCCTGGATCCTTGGATGGAGGAATGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS-3UTR CAA 90 bp | CAACACCTGGCTCTATTCCGCCTCTGGTGCTGTTCTTGGTGGTCATCCTATGGTTCTTCATACTTATTCTaGAAATCTTCCACCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: QHLALFRLWCCSWWSSYGSSYLF*KSSTTS Trigger: GGATGTGGTGGAAGATTTCAAGAATAAGTATGAAGA...ACCATAGGATGACCACCAAGAACAGCACCAGAGGCGGAATAGAGCCAGGTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS CAA 90 bp | CGCCCACCGGGCCCCCATAAGCGGAGCGCACGGCCACACGAGGCCTaGATGAGCCCAGGCCATAGAGGCTCCTGCTGCCGAAGCTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RPPGPHKRSARPHEA*MSPGHRGSCCRSWR Trigger: GCGCCAGCTTCGGCAGCAGGAGCCTCTATGGCCTGGGCTCATCAAGGCCTCGTGTGGCCGTGCGCTCCGCTTATGGGGGCCCGGTGGGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS GCA 72 bp | GAGGCCTTGATGAGCCCAGGCCATAGAGGCTCCTGCTaGCGAAGCTGGCGCGGCCCGAGCTCAGGCGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: EALMSPGHRGSC*RSWRGPSSGAP Trigger: AGGTGCGCCTGAGCTCGGGCCGCGCCAGCTTCGGCAGCAGGAGCCTCTATGGCCTGGGCTCATCAAGGCCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
||
| CDS CAA 72 bp | GGCCCCCATAAGCGGAGCGCACGGCCACACGAGGCCTaGATGAGCCCAGGCCATAGAGGCTCCTGCTGCCGA | + |
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Preference number: 6 (lower is better) Translates to: GPHKRSARPHEA*MSPGHRGSCCR Trigger: TCGGCAGCAGGAGCCTCTATGGCCTGGGCTCATCAAGGCCTCGTGTGGCCGTGCGCTCCGCTTATGGGGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| CDS CAA 72 bp | CTGAGGGCTCCGGGTCCCCCACTGAAGCTCAGAGCATaGCTTCCCATGGTTCCTCCGAAGATAAGCTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: LRAPGPPLKLRA*LPMVPPKISLP Trigger: TGGCAAGCTTATCTTCGGAGGAACCATGGGAAGCAATGCTCTGAGCTTCAGTGGGGGACCCGGAGCCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| CDS CAA 72 bp | CCTTGTTCCTCAGCCTCTGCGATGCTGGACTCTAACTaGGCACGCTGGTTCTTCAAGGTGTCAATCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PCSSASAMLDSN*ARWFFKVSISA Trigger: GGCAGAGATTGACACCTTGAAGAACCAGCGTGCCAAGTTAGAGTCCAGCATCGCAGAGGCTGAGGAACAAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| CDS CCA 72 bp | CTTGTTCCTCAGCCTCTGCGATGCTGGACTCTAACTTaGCACGCTGGTTCTTCAAGGTGTCAATCTCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LVPQPLRCWTLT*HAGSSRCQSLP Trigger: AGGCAGAGATTGACACCTTGAAGAACCAGCGTGCCAAGTTAGAGTCCAGCATCGCAGAGGCTGAGGAACAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| CDS CAA 72 bp | AGAGCATTGCTTCCCATGGTTCCTCCGAAGATAAGCTaGCCACCATTGCCCCCAGTGGAATTCACAACAGAG | + |
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Preference number: 6 (lower is better) Translates to: RALLPMVPPKIS*PPLPPVEFTTE Trigger: CTCTGTTGTGAATTCCACTGGGGGCAATGGTGGCAAGCTTATCTTCGGAGGAACCATGGGAAGCAATGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| CDS CAA 90 bp | AGAGCATTGCTTCCCATGGTTCCTCCGAAGATAAGCTTGCCACCATaGCCCCCAGTGGAATTCACAACAGAGATATTCACAGGTCCCATT | + |
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Preference number: 6 (lower is better) Translates to: RALLPMVPPKISLPP*PPVEFTTEIFTGPI Trigger: AATGGGACCTGTGAATATCTCTGTTGTGAATTCCACTGGGGGCAATGGTGGCAAGCTTATCTTCGGAGGAACCATGGGAAGCAATGCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| CDS CAA 90 bp | CTGAAGCTCAGAGCATTGCTTCCCATGGTTCCTCCGAAGATAAGCTaGCCACCATTGCCCCCAGTGGAATTCACAACAGAGATATTCACA | + |
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Preference number: 6 (lower is better) Translates to: LKLRALLPMVPPKIS*PPLPPVEFTTEIFT Trigger: TGTGAATATCTCTGTTGTGAATTCCACTGGGGGCAATGGTGGCAAGCTTATCTTCGGAGGAACCATGGGAAGCAATGCTCTGAGCTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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| CDS CAA 72 bp | CTTCCCATGGTTCCTCCGAAGATAAGCTTGCCACCATaGCCCCCAGTGGAATTCACAACAGAGATATTCACA | + |
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Preference number: 6 (lower is better) Translates to: LPMVPPKISLPP*PPVEFTTEIFT Trigger: TGTGAATATCTCTGTTGTGAATTCCACTGGGGGCAATGGTGGCAAGCTTATCTTCGGAGGAACCATGGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068904.9 |
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