Pregenerated sensors for KRT32 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046095Ensembl transcript IDs: ENSMUST00000107419.2
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCTGGCCACACTCTTGTCTTGGTCTCAGGATTGTGGTCAGACTTaGTGTGACGAGGCACCAGGCCAGAGAACTCAGGTCCCTCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: KLATLLSWSQDCGQT*CDEAPGQRTQVPLG Trigger: TCCCAGAGGGACCTGAGTTCTCTGGCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAGTGTGGCCAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| 3UTR CCA 90 bp | GCAATGTATTATCAGGACATGTTGCTAGTGTCCACTTCCTGGTTCTaGTCAGGGCCAACTAAGCTGGCCACACTCTTGTCTTGGTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: AMYYQDMLLVSTSWF*SGPTKLATLLSWSQ Trigger: CTGAGACCAAGACAAGAGTGTGGCCAGCTTAGTTGGCCCTGACCAGAACCAGGAAGTGGACACTAGCAACATGTCCTGATAATACATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| 3UTR CAA 90 bp | GGAAATAGAGGAGGCAGCGCTGAAGCAATGTATTATCAGGACATGTaGCTAGTGTCCACTTCCTGGTTCTGGTCAGGGCCAACTAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: GNRGGSAEAMYYQDM*LVSTSWFWSGPTKL Trigger: CAGCTTAGTTGGCCCTGACCAGAACCAGGAAGTGGACACTAGCAACATGTCCTGATAATACATTGCTTCAGCGCTGCCTCCTCTATTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| 3UTR CCA 72 bp | ACACTCTTGTCTTGGTCTCAGGATTGTGGTCAGACTTaGTGTGACGAGGCACCAGGCCAGAGAACTCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: TLLSWSQDCGQT*CDEAPGQRTQV Trigger: GACCTGAGTTCTCTGGCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAGTGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| 3UTR CCA 72 bp | TGGTCAGGGCCAACTAAGCTGGCCACACTCTTGTCTTaGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAG | + |
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Preference number: 3 (lower is better) Translates to: WSGPTKLATLLS*SQDCGQTWCDE Trigger: CTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAGTGTGGCCAGCTTAGTTGGCCCTGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| 3UTR CCA 72 bp | TGTCCACTTCCTGGTTCTGGTCAGGGCCAACTAAGCTaGCCACACTCTTGTCTTGGTCTCAGGATTGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: CPLPGSGQGQLS*PHSCLGLRIVV Trigger: GACCACAATCCTGAGACCAAGACAAGAGTGTGGCCAGCTTAGTTGGCCCTGACCAGAACCAGGAAGTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| 3UTR CCA 72 bp | TATCAGGACATGTTGCTAGTGTCCACTTCCTGGTTCTaGTCAGGGCCAACTAAGCTGGCCACACTCTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: YQDMLLVSTSWF*SGPTKLATLLS Trigger: AGACAAGAGTGTGGCCAGCTTAGTTGGCCCTGACCAGAACCAGGAAGTGGACACTAGCAACATGTCCTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| 3UTR-3UTR CAA 90 bp | AGTTTTATTCGCAGTTTAGCCGAAAACACATGCACTCTGAGAAAGCAGAGACAAGGCCACACTCTTGTCTaGGTCTCAGGATTGTGGTCA | + |
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Preference number: 3 (lower is better) Translates to: SFIRSLAENTCTLRKQRQGHTLV*VSGLWS Trigger: TGACCACAATCCTGAGACCAAGACAAGAGTGTGGCC...TTGTCTCTGCTTTCTCAGAGTGCATGTGTTTTCGGCTAAACTGCGAATAAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| 3UTR GCA 72 bp | GAATTAAGTTTTATTCGCAGTTTAGCCGAAAACACATaGACTCTGAGAAAGCAGAGACAACCAGAAACACCA | + |
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Preference number: 3 (lower is better) Translates to: ELSFIRSLAENT*TLRKQRQPETP Trigger: TGGTGTTTCTGGTTGTCTCTGCTTTCTCAGAGTGCATGTGTTTTCGGCTAAACTGCGAATAAAACTTAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR GCA 90 bp | CACTCTTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGCCGTTGGCCGGCGGTTaGTGGGTTGGCAAGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HSCLGLRIVVRLGVTRHQPLAGG*WVGKSW Trigger: CCAGCTCTTGCCAACCCAGCAACCGCCGGCCAACGG...CTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR GCA 90 bp | TGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGGCCAGAGAACTTACCCCAGGAGAGGGTaGACAAGGCTGGCAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: WSQDCGQTWCDEAPGQRTYPRRG*TRLAGG Trigger: CCCTCCTGCCAGCCTTGTGCACCCTCTCCTGGGGTA...AGTTCTCTGGCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR GCA 90 bp | CTCTTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGGCTGCAGACAGAGGGCATaGACTGCAGCGGCTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LLSWSQDCGQTWCDEAPGCRQRA*TAAAGR Trigger: TCTGCCAGCCGCTGCAGTGCATGCCCTCTGTCTGCA...GCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CCA 90 bp | TGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGGCCAGAGAACTTTGGCCGGCGGTTGCTaGGTTGGCAAGAGCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: WSQDCGQTWCDEAPGQRTLAGGC*VGKSWT Trigger: TGTCCAGCTCTTGCCAACCCAGCAACCGCCGGCCAA...AGTTCTCTGGCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CCA 90 bp | ATGTTGCTAGTGTCCACTTCCTGGTTCTGGTCAGGGCCAACTAAGCTGGCCACAGAGGGTGCACAAGGCTaGCAGGAGGGAGTGGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: MLLVSTSWFWSGPTKLATEGAQG*QEGVEQ Trigger: TTGCTCCACTCCCTCCTGCCAGCCTTGTGCACCCTC...TGTGGCCAGCTTAGTTGGCCCTGACCAGAACCAGGAAGTGGACACTAGCAACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR GCA 90 bp | TGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGGCCAGAGAACTTGTAGGTGGTCGGCATaGAGACAGAGGGCATGCACT | + |
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Preference number: 4 (lower is better) Translates to: WSQDCGQTWCDEAPGQRTCRWSA*RQRACT Trigger: AGTGCATGCCCTCTGTCTGCATGCCGACCACCTACA...AGTTCTCTGGCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CCA 90 bp | GCCACACTCTTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCAAGAAAGGCAGCTGGCTaGCCTGTAGGTGGTCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: ATLLSWSQDCGQTWCDEARKAAG*PVGGRH Trigger: ATGCCGACCACCTACAGGCCAGCCAGCTGCCTTTCT...TGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAGTGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR TCA 90 bp | CACTCTTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGCTGATGAGGTGTTGGTaGCACAGCAGCTGGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: HSCLGLRIVVRLGVTRHQLMRCW*HSSWMA Trigger: TGCCATCCAGCTGCTGTGTCACCAACACCTCATCAG...CTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR TCA 90 bp | ATGTTGCTAGTGTCCACTTCCTGGTTCTGGTCAGGGCCAACTAAGCTGGCCACATCTCTCAGGCTGTGCTaGGCCTGCAGTTCTATCTCC | + |
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Preference number: 4 (lower is better) Translates to: MLLVSTSWFWSGPTKLATSLRLC*ACSSIS Trigger: GGAGATAGAACTGCAGGCTCAGCACAGCCTGAGAGA...TGTGGCCAGCTTAGTTGGCCCTGACCAGAACCAGGAAGTGGACACTAGCAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR GCA 90 bp | TGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGGCCAGAGAACTCTTGCCCTCCAGCTCTaGATTCTCTTTCTCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: WSQDCGQTWCDEAPGQRTLALQL*ILFLQL Trigger: CAGCTGGAGAAAGAGAATGCAGAGCTGGAGGGCAAG...AGTTCTCTGGCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CCA 90 bp | ATGTTGCTAGTGTCCACTTCCTGGTTCTGGTCAGGGCCAACTAAGCTGGCCACATGCTGCCCATGTTACTaGAACAGACGGAGGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: MLLVSTSWFWSGPTKLATCCPCY*NRRRKA Trigger: GGCCTTCCTCCGTCTGTTCCAGTAACATGGGCAGCA...TGTGGCCAGCTTAGTTGGCCCTGACCAGAACCAGGAAGTGGACACTAGCAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR TCA 90 bp | GCCACACTCTTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCTCCATCTGCATATTaGACCATTCCTCCACGTCCC | + |
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Preference number: 4 (lower is better) Translates to: ATLLSWSQDCGQTWCDEAPPSAY*TIPPRP Trigger: GGGACGTGGAGGAATGGTTCAATATGCAGATGGAGG...TGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAGTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CCA 90 bp | TGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGGCCAGAATCATGCATTGCATCTaGGACAGCTGGGAGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: CLGLRIVVRLGVTRHQARIMHCI*DSWEVK Trigger: CTTCACCTCCCAGCTGTCCCAGATGCAATGCATGAT...TCTGGCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| 3UTR CAA 72 bp | TGGTTCTGGTCAGGGCCAACTAAGCTGGCCACACTCTaGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: WFWSGPTKLATL*SWSQDCGQTWC Trigger: ACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAGTGTGGCCAGCTTAGTTGGCCCTGACCAGAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| 3UTR CAA 72 bp | GGAGGCAGCGCTGAAGCAATGTATTATCAGGACATGTaGCTAGTGTCCACTTCCTGGTTCTGGTCAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GGSAEAMYYQDM*LVSTSWFWSGP Trigger: TGGCCCTGACCAGAACCAGGAAGTGGACACTAGCAACATGTCCTGATAATACATTGCTTCAGCGCTGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR TCA 90 bp | TTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGGCCAGCTTTCTCATTGCCATTaGAGGCACCCTCACAGAACA | + |
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Preference number: 4 (lower is better) Translates to: LSWSQDCGQTWCDEAPGQLSHCH*RHPHRT Trigger: TGTTCTGTGAGGGTGCCTTCAATGGCAATGAGAAAG...CTGGCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR GCA 90 bp | TTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGGCCAGAGACATCTTGGATCTTaGCCTCCAGCTCTGCATTCT | + |
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Preference number: 4 (lower is better) Translates to: LSWSQDCGQTWCDEAPGQRHLGS*PPALHS Trigger: AGAATGCAGAGCTGGAGGGCAAGATCCAAGATGTCT...CTGGCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR TCA 90 bp | AAGCTGGCCACACTCTTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACCTTCATGGTTCCTCTTaGGGCACAGAAGTTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KLATLLSWSQDCGQTWCDLHGSS*GTEVPP Trigger: AGGAGGAACTTCTGTGCCTCAAGAGGAACCATGAAG...GTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAGTGTGGCCAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR TCA 90 bp | GCCACACTCTTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACAGGTCAATGATGTCTaGTTGGTAGCTCTGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: ATLLSWSQDCGQTWCDEAQVNDV*LVALKL Trigger: CAGCTTCAGAGCTACCAATCAGACATCATTGACCTG...TGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAGTGTGGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR GCA 90 bp | CACTCTTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGCATTCTCAGCCTTGGTaGACAGAACCTTTTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: HSCLGLRIVVRLGVTRHQHSQPW*TEPFAA Trigger: TGCAGCAAAAGGTTCTGTGCACCAAGGCTGAGAATG...CTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR TCA 90 bp | AAGCTGGCCACACTCTTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACTTCGTCTCAGGTCAATaGTGTCTGATTGGTAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: KLATLLSWSQDCGQTWCDFVSGQ*CLIGSS Trigger: AGAGCTACCAATCAGACATCATTGACCTGAGACGAA...GTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAGTGTGGCCAGCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR TCA 90 bp | AAGCTGGCCACACTCTTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACCTATCTCCAGAGTATTaGCTGTTCGTCTCAGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: KLATLLSWSQDCGQTWCDLSPEY*LFVSGQ Trigger: TTGACCTGAGACGAACAGTCAATACTCTGGAGATAG...GTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAGTGTGGCCAGCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR GCA 90 bp | ATGTTGCTAGTGTCCACTTCCTGGTTCTGGTCAGGGCCAACTAAGCTGGCCACATTAAGCTCCTCCATCTaGATATTGAACCATTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: MLLVSTSWFWSGPTKLATLSSSI*ILNHSS Trigger: GGAGGAATGGTTCAATATGCAGATGGAGGAGCTTAA...TGTGGCCAGCTTAGTTGGCCCTGACCAGAACCAGGAAGTGGACACTAGCAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CCA 90 bp | AGTTTTATTCGCAGTTTAGCCGAAAACACATGCACTCTGAGAAAGCAGAGACAAGGCACACAAACAGTGTaGGGCACACAGACGGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: SFIRSLAENTCTLRKQRQGTQTV*GTQTVR Trigger: CCGCACCGTCTGTGTGCCCCACACTGTTTGTGTGCC...TTGTCTCTGCTTTCTCAGAGTGCATGTGTTTTCGGCTAAACTGCGAATAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CCA 90 bp | AGTTTTATTCGCAGTTTAGCCGAAAACACATGCACTCTGAGAAAGCAGAGACAATCTCCTCCAGCATCCTaGTTAGGTCCACGGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SFIRSLAENTCTLRKQRQSPPAS*LGPREV Trigger: CACCTCCCGTGGACCTAACCAGGATGCTGGAGGAGA...TTGTCTCTGCTTTCTCAGAGTGCATGTGTTTTCGGCTAAACTGCGAATAAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS CCA 90 bp | TGCGGGATACCCCAGGAGAGGGTGCACAAGGCTGGCAGGAGGGAGTaGAGCAAGGGTTACAGGGTAGCTTGCTGTCCTCACTCTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: CGIPQERVHKAGRRE*SKGYRVACCPHSPA Trigger: TGCTGGAGAGTGAGGACAGCAAGCTACCCTGTAACCCTTGCTCCACTCCCTCCTGCCAGCCTTGTGCACCCTCTCCTGGGGTATCCCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CAA 90 bp | TGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGGCCAGAGAACTGGGTTACAGGGTAGCTaGCTGTCCTCACTCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: WSQDCGQTWCDEAPGQRTGLQGS*LSSLSS Trigger: GCTGGAGAGTGAGGACAGCAAGCTACCCTGTAACCC...AGTTCTCTGGCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CAA 90 bp | TGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGGCCAGAGAACTGATGCTGATGAGGTGTaGGTGACACAGCAGCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: WSQDCGQTWCDEAPGQRTDADEV*VTQQLD Trigger: ATCCAGCTGCTGTGTCACCAACACCTCATCAGCATC...AGTTCTCTGGCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CAA 90 bp | TTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGGCCAGGGTGCACAGAACCTTTaGCTGCAGCTCTTCGATGGT | + |
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Preference number: 5 (lower is better) Translates to: LSWSQDCGQTWCDEAPGQGAQNL*LQLFDG Trigger: ACCATCGAAGAGCTGCAGCAAAAGGTTCTGTGCACC...CTGGCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CAA 90 bp | CTGGCCACACTCTTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGCTTGTGGCCACCTGCTaGTTAAGCTCCTCCATCTGC | + |
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Preference number: 5 (lower is better) Translates to: LATLLSWSQDCGQTWCDELVATC*LSSSIC Trigger: GCAGATGGAGGAGCTTAACAAGCAGGTGGCCACAAG...CTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAGTGTGGCCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CAA 90 bp | ATGTATTATCAGGACATGTTGCTAGTGTCCACTTCCTGGTTCTGGTCAGGGCCAGGCCGTGCCGAGCTCTaGAGAGATGCTGATGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: MYYQDMLLVSTSWFWSGPGRAEL*RDADEV Trigger: CACCTCATCAGCATCTCTCAAGAGCTCGGCACGGCC...TGGCCCTGACCAGAACCAGGAAGTGGACACTAGCAACATGTCCTGATAATACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CAA 90 bp | TCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGGCCAGAGAACTCAGTGTGCACGATCATTCTaGCATTCTCAGCCTTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: SQDCGQTWCDEAPGQRTQCARSF*HSQPWC Trigger: GCACCAAGGCTGAGAATGCAAGAATGATCGTGCACA...CTGAGTTCTCTGGCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CAA 90 bp | CTCTTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGGCTCCTCCATCTGCATATaGAACCATTCCTCCACGTCC | + |
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Preference number: 5 (lower is better) Translates to: LLSWSQDCGQTWCDEAPGSSICI*NHSSTS Trigger: GGACGTGGAGGAATGGTTCAATATGCAGATGGAGGA...GCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CAA 90 bp | TTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGGCCAGCAACACCTTGTACTCTaGGTTCTGTCTCTCCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: LSWSQDCGQTWCDEAPGQQHLVL*VLSLQV Trigger: GACCTGGAGAGACAGAACCAAGAGTACAAGGTGTTG...CTGGCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CAA 90 bp | CACTCTTGTCTTGGTCTCAGGATTGTGGTCAGACTTGGTGTGACGAGGCACCAGTCTATCTCCAGAGTATaGACTGTTCGTCTCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: HSCLGLRIVVRLGVTRHQSISRV*TVRLRS Trigger: TGACCTGAGACGAACAGTCAATACTCTGGAGATAGA...CTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAGACAAGAGTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS-3UTR CAA 90 bp | ATGTATTATCAGGACATGTTGCTAGTGTCCACTTCCTGGTTCTGGTCAGGGCCACTTGCATTCTCAGCCTaGGTGCACAGAACCTTTTGC | + |
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Preference number: 5 (lower is better) Translates to: MYYQDMLLVSTSWFWSGPLAFSA*VHRTFC Trigger: GCAAAAGGTTCTGTGCACCAAGGCTGAGAATGCAAG...TGGCCCTGACCAGAACCAGGAAGTGGACACTAGCAACATGTCCTGATAATACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS TCA 90 bp | TTCTATCTCCAGAGTATTGACTGTTCGTCTCAGGTCAATGATGTCTaGTTGGTAGCTCTGAAGCTGCTCAGAGCTTGTGGCCACCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: FYLQSIDCSSQVNDV*LVALKLLRACGHLL Trigger: AAGCAGGTGGCCACAAGCTCTGAGCAGCTTCAGAGCTACCAATCAGACATCATTGACCTGAGACGAACAGTCAATACTCTGGAGATAGAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS GCA 72 bp | GGGCACACAGACGGTGCGGGATACCCCAGGAGAGGGTaGACAAGGCTGGCAGGAGGGAGTGGAGCAAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: GHTDGAGYPRRG*TRLAGGSGARV Trigger: AACCCTTGCTCCACTCCCTCCTGCCAGCCTTGTGCACCCTCTCCTGGGGTATCCCGCACCGTCTGTGTGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS GCA 72 bp | CTGGCCTGTAGGTGGTCGGCATGCAGACAGAGGGCATaGACTGCAGCGGCTGGCAGACATAACCCAGGCACA | + |
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Preference number: 6 (lower is better) Translates to: LACRWSACRQRA*TAAAGRHNPGT Trigger: TGTGCCTGGGTTATGTCTGCCAGCCGCTGCAGTGCATGCCCTCTGTCTGCATGCCGACCACCTACAGGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS CCA 72 bp | CCCCAGGAGAGGGTGCACAAGGCTGGCAGGAGGGAGTaGAGCAAGGGTTACAGGGTAGCTTGCTGTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: PQERVHKAGRRE*SKGYRVACCPH Trigger: GTGAGGACAGCAAGCTACCCTGTAACCCTTGCTCCACTCCCTCCTGCCAGCCTTGTGCACCCTCTCCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS CCA 72 bp | GCCATAGGTCCCCATGGAGCTAGAGATGCAACCCGTTaGCCGGCGGTTGCTGGGTTGGCAAGAGCTGGACAA | + |
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Preference number: 6 (lower is better) Translates to: AIGPHGARDATR*PAVAGLARAGQ Trigger: TTGTCCAGCTCTTGCCAACCCAGCAACCGCCGGCCAACGGGTTGCATCTCTAGCTCCATGGGGACCTATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS CAA 90 bp | CTGCCCATGTTACTGGAACAGACGGAGGAAGGCCGTGCCGAGCTCTaGAGAGATGCTGATGAGGTGTTGGTGACACAGCAGCTGGATGGC | + |
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Preference number: 6 (lower is better) Translates to: LPMLLEQTEEGRAEL*RDADEVLVTQQLDG Trigger: GCCATCCAGCTGCTGTGTCACCAACACCTCATCAGCATCTCTCAAGAGCTCGGCACGGCCTTCCTCCGTCTGTTCCAGTAACATGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS CCA 72 bp | AGAGCTGGACAAGTAGGTCTTAGAAAGGCAGCTGGCTaGCCTGTAGGTGGTCGGCATGCAGACAGAGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: RAGQVGLRKAAG*PVGGRHADRGH Trigger: ATGCCCTCTGTCTGCATGCCGACCACCTACAGGCCAGCCAGCTGCCTTTCTAAGACCTACTTGTCCAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS CAA 72 bp | TTACTGGAACAGACGGAGGAAGGCCGTGCCGAGCTCTaGAGAGATGCTGATGAGGTGTTGGTGACACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLEQTEEGRAEL*RDADEVLVTQQ Trigger: CTGCTGTGTCACCAACACCTCATCAGCATCTCTCAAGAGCTCGGCACGGCCTTCCTCCGTCTGTTCCAGTAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS CAA 90 bp | GGGAGGTGCAGCATCTACCTCAATGTTAAGGCGGTCCCCGAGCTGTaGTCGAAGGACACCAACTTCCTCTTCATGGTTCCTCTTGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: GRCSIYLNVKAVPEL*SKDTNFLFMVPLEA Trigger: TGCCTCAAGAGGAACCATGAAGAGGAAGTTGGTGTCCTTCGACAACAGCTCGGGGACCGCCTTAACATTGAGGTAGATGCTGCACCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS CAA 72 bp | AGGACACATGGTCAGCACCTGCCCCTGGTAGACATCTaGGATCTTGCCCTCCAGCTCTGCATTCTCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: RTHGQHLPLVDI*DLALQLCILFL Trigger: GAGAAAGAGAATGCAGAGCTGGAGGGCAAGATCCAAGATGTCTACCAGGGGCAGGTGCTGACCATGTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS CAA 72 bp | AGCATCTACCTCAATGTTAAGGCGGTCCCCGAGCTGTaGTCGAAGGACACCAACTTCCTCTTCATGGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SIYLNVKAVPEL*SKDTNFLFMVP Trigger: AGGAACCATGAAGAGGAAGTTGGTGTCCTTCGACAACAGCTCGGGGACCGCCTTAACATTGAGGTAGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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| CDS TCA 72 bp | CAGAGTATTGACTGTTCGTCTCAGGTCAATGATGTCTaGTTGGTAGCTCTGAAGCTGCTCAGAGCTTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: QSIDCSSQVNDV*LVALKLLRACG Trigger: GCCACAAGCTCTGAGCAGCTTCAGAGCTACCAATCAGACATCATTGACCTGAGACGAACAGTCAATACTCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107419.2 |
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