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Pregenerated sensors for KRT31 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000048981

Ensembl transcript IDs: ENSMUST00000007318.2

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATTCTGGGACTGTCATCCCAGAGATGCTCTGGCCATTAGGTTTGTaGGTTTTACGTCTGTTTTTGTGGAACCAGAACCAGGTCAGCCAT +
Preference number: 1 (lower is better)
Translates to: DSGTVIPEMLWPLGL*VLRLFLWNQNQVSH
Trigger: ATGGCTGACCTGGTTCTGGTTCCACAAAAACAGACGTAAAACCCACAAACCTAATGGCCAGAGCATCTCTGGGATGACAGTCCCAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
3UTR-3UTR TCA 90 bp AAATGTTTATTGGGAGATTACAAGGGAGGGCCACTGGCACTTCAGAGTCCTCTGGGAGGGTGCAGTGGCTaGAGACACAGATTCTGGGAC +
Preference number: 2 (lower is better)
Translates to: KCLLGDYKGGPLALQSPLGGCSG*RHRFWD
Trigger: GTCCCAGAATCTGTGTCTTCAGCCACTGCACCCTCC...CAGAGGACTCTGAAGTGCCAGTGGCCCTCCCTTGTAATCTCCCAATAAACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
3UTR CAA 90 bp ACAGATTCTGGGACTGTCATCCCAGAGATGCTCTGGCCATTAGGTTaGTGGGTTTTACGTCTGTTTTTGTGGAACCAGAACCAGGTCAGC +
Preference number: 2 (lower is better)
Translates to: TDSGTVIPEMLWPLG*WVLRLFLWNQNQVS
Trigger: GCTGACCTGGTTCTGGTTCCACAAAAACAGACGTAAAACCCACAAACCTAATGGCCAGAGCATCTCTGGGATGACAGTCCCAGAATCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
3UTR-3UTR CCA 90 bp ATGTTTATTGGGAGATTACAAGGGAGGGCCACTGGCACTTCAGAGTCCTCTGAGTTACGTCTGTTTTTGTaGAACCAGAACCAGGTCAGC +
Preference number: 2 (lower is better)
Translates to: MFIGRLQGRATGTSESSELRLFL*NQNQVS
Trigger: GCTGACCTGGTTCTGGTTCCACAAAAACAGACGTAA...CTCAGAGGACTCTGAAGTGCCAGTGGCCCTCCCTTGTAATCTCCCAATAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
3UTR-3UTR CCA 90 bp AAATGTTTATTGGGAGATTACAAGGGAGGGCCACTGGCACTTCAGAGTCCTCTGATCCCAGAGATGCTCTaGCCATTAGGTTTGTGGGTT +
Preference number: 2 (lower is better)
Translates to: KCLLGDYKGGPLALQSPLIPEML*PLGLWV
Trigger: AACCCACAAACCTAATGGCCAGAGCATCTCTGGGAT...CAGAGGACTCTGAAGTGCCAGTGGCCCTCCCTTGTAATCTCCCAATAAACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
3UTR-3UTR CCA 90 bp TTATTGGGAGATTACAAGGGAGGGCCACTGGCACTTCAGAGTCCTCTGAGCAGTTGGCCATTAGGTTTGTaGGTTTTACGTCTGTTTTTG +
Preference number: 2 (lower is better)
Translates to: LLGDYKGGPLALQSPLSSWPLGL*VLRLFL
Trigger: CAAAAACAGACGTAAAACCCACAAACCTAATGGCCA...ACTGCTCAGAGGACTCTGAAGTGCCAGTGGCCCTCCCTTGTAATCTCCCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
3UTR TCA 72 bp GCAGGCAGAGAATGGCCTGGAGGAGGGTGCAGTGGCTaGAGACACAGATTCTGGGACTGTCATCCCAGAGAT +
Preference number: 3 (lower is better)
Translates to: AGREWPGGGCSG*RHRFWDCHPRD
Trigger: ATCTCTGGGATGACAGTCCCAGAATCTGTGTCTTCAGCCACTGCACCCTCCTCCAGGCCATTCTCTGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
3UTR CCA 72 bp GTCTGTTTTTGTGGAACCAGAACCAGGTCAGCCATCTaGAGTGCTAAGCCCAGTGTCCTTGCTCTGTTGACA +
Preference number: 3 (lower is better)
Translates to: VCFCGTRTRSAI*SAKPSVLALLT
Trigger: TGTCAACAGAGCAAGGACACTGGGCTTAGCACTCCAGATGGCTGACCTGGTTCTGGTTCCACAAAAACAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
3UTR CCA 72 bp GACACAGATTCTGGGACTGTCATCCCAGAGATGCTCTaGCCATTAGGTTTGTGGGTTTTACGTCTGTTTTTG +
Preference number: 3 (lower is better)
Translates to: DTDSGTVIPEML*PLGLWVLRLFL
Trigger: CAAAAACAGACGTAAAACCCACAAACCTAATGGCCAGAGCATCTCTGGGATGACAGTCCCAGAATCTGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR GCA 90 bp TGTGGAACCAGAACCAGGTCAGCCATCTGGAGTGCTAAGCCCAGTGTCCTTGCTGTGGGACACAAGGTGTaGAAGGGGCAGGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: CGTRTRSAIWSAKPSVLAVGHKV*KGQGVG
Trigger: GCCCACCCCCTGCCCCTTGCACACCTTGTGTCCCAC...AGCAAGGACACTGGGCTTAGCACTCCAGATGGCTGACCTGGTTCTGGTTCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR CCA 90 bp GGTGCAGTGGCTGAAGACACAGATTCTGGGACTGTCATCCCAGAGATGCTCTGGAGGGGACACAGGGATTaGAGACGCAGGGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: GAVAEDTDSGTVIPEMLWRGHRD*RRRAQW
Trigger: CCATTGGGCCCTGCGTCTCCAATCCCTGTGTCCCCT...CCAGAGCATCTCTGGGATGACAGTCCCAGAATCTGTGTCTTCAGCCACTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR GCA 90 bp ACCAGGTCAGCCATCTGGAGTGCTAAGCCCAGTGTCCTTGCTCTGTTGACATCCTCTGACTCTACCAGCTaGCGCAGACCGAGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: TRSAIWSAKPSVLALLTSSDSTS*RRPSSV
Trigger: GACAGAGCTCGGTCTGCGGCAGCTGGTAGAGTCAGA...GGATGTCAACAGAGCAAGGACACTGGGCTTAGCACTCCAGATGGCTGACCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR TCA 90 bp CACAGATTCTGGGACTGTCATCCCAGAGATGCTCTGGCCATTAGGTTTGTGGGTACCATGGCCTCGTACTaGCACCTGGTCTCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: HRFWDCHPRDALAIRFVGTMASY*HLVSLS
Trigger: GCTCAACGAGACCAGGTGTCAGTACGAGGCCATGGT...ACCCACAAACCTAATGGCCAGAGCATCTCTGGGATGACAGTCCCAGAATCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR GCA 90 bp GTGGCTGAAGACACAGATTCTGGGACTGTCATCCCAGAGATGCTCTGGCCATTAAGCGTACAAAGGAGTTaGATGGCCCACAGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: VAEDTDSGTVIPEMLWPLSVQRS*MAHSGD
Trigger: GTCCCCGCTGTGGGCCATGCAACTCCTTTGTACGCT...TAATGGCCAGAGCATCTCTGGGATGACAGTCCCAGAATCTGTGTCTTCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR CCA 90 bp TTTACGTCTGTTTTTGTGGAACCAGAACCAGGTCAGCCATCTGGAGTGCTAAGCCCCACAGCGGGGACGTaGGACACAAGGTGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: FTSVFVEPEPGQPSGVLSPTAGT*DTRCAR
Trigger: CCTTGCACACCTTGTGTCCCACGTCCCCGCTGTGGG...GCTTAGCACTCCAGATGGCTGACCTGGTTCTGGTTCCACAAAAACAGACGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR GCA 90 bp ATGTTTATTGGGAGATTACAAGGGAGGGCCACTGGCACTTCAGAGTCCTCTGAGGCTTGCCGCATGCATTaGTTGTGGCACAGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: MFIGRLQGRATGTSESSEACRMH*LWHRGC
Trigger: GCAACCCCTGTGCCACAAGCAATGCATGCGGCAAGC...CTCAGAGGACTCTGAAGTGCCAGTGGCCCTCCCTTGTAATCTCCCAATAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR TCA 90 bp AAATGTTTATTGGGAGATTACAAGGGAGGGCCACTGGCACTTCAGAGTCCTCTGCCTCTGTCTGTGTGGTaGACCATTCCTCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: KCLLGDYKGGPLALQSPLPLSVW*TIPPLP
Trigger: GGGAAGTGGAGGAATGGTTCACCACACAGACAGAGG...CAGAGGACTCTGAAGTGCCAGTGGCCCTCCCTTGTAATCTCCCAATAAACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR GCA 90 bp AAATGTTTATTGGGAGATTACAAGGGAGGGCCACTGGCACTTCAGAGTCCTCTGGAGTTTCTCATGCAGTaGTGGGCCTGCAGCTCGATC +
Preference number: 4 (lower is better)
Translates to: KCLLGDYKGGPLALQSPLEFLMQ*WACSSI
Trigger: GATCGAGCTGCAGGCCCAGCACTGCATGAGAAACTC...CAGAGGACTCTGAAGTGCCAGTGGCCCTCCCTTGTAATCTCCCAATAAACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR TCA 90 bp GCTCTGGCCATTAGGTTTGTGGGTTTTACGTCTGTTTTTGTGGAACCAGAACCAGGCAGCGTAGGGTGTTaGCTTCCTCTTCATGGTTCC +
Preference number: 4 (lower is better)
Translates to: ALAIRFVGFTSVFVEPEPGSVGC*LPLHGS
Trigger: GGAACCATGAAGAGGAAGTCAACACCCTACGCTGCC...TGGTTCTGGTTCCACAAAAACAGACGTAAAACCCACAAACCTAATGGCCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
3UTR CAA 72 bp CTCTGGCCATTAGGTTTGTGGGTTTTACGTCTGTTTTaGTGGAACCAGAACCAGGTCAGCCATCTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LWPLGLWVLRLF*WNQNQVSHLEC
Trigger: GCACTCCAGATGGCTGACCTGGTTCTGGTTCCACAAAAACAGACGTAAAACCCACAAACCTAATGGCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR TCA 90 bp GATGCTCTGGCCATTAGGTTTGTGGGTTTTACGTCTGTTTTTGTGGAACCAGAATCCTTCGCAGGCCGTTaGTGTCTGACTCTACCAGCT +
Preference number: 4 (lower is better)
Translates to: DALAIRFVGFTSVFVEPESFAGR*CLTLPA
Trigger: AGCTGGTAGAGTCAGACATCAACGGCCTGCGAAGGA...TTCTGGTTCCACAAAAACAGACGTAAAACCCACAAACCTAATGGCCAGAGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
3UTR CAA 72 bp GGGACTGTCATCCCAGAGATGCTCTGGCCATTAGGTTaGTGGGTTTTACGTCTGTTTTTGTGGAACCAGAAC +
Preference number: 4 (lower is better)
Translates to: GTVIPEMLWPLG*WVLRLFLWNQN
Trigger: GTTCTGGTTCCACAAAAACAGACGTAAAACCCACAAACCTAATGGCCAGAGCATCTCTGGGATGACAGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR CAA 90 bp ACCAGAACCAGGTCAGCCATCTGGAGTGCTAAGCCCAGTGTCCTTGCTCTGTTGCAGGGGACACAGGGATaGGAGACGCAGGGCCCAATG +
Preference number: 5 (lower is better)
Translates to: TRTRSAIWSAKPSVLALLQGTQG*ETQGPM
Trigger: CATTGGGCCCTGCGTCTCCAATCCCTGTGTCCCCTG...CAACAGAGCAAGGACACTGGGCTTAGCACTCCAGATGGCTGACCTGGTTCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR CAA 90 bp TACGTCTGTTTTTGTGGAACCAGAACCAGGTCAGCCATCTGGAGTGCTAAGCCCATCCTTCGCAGGCCGTaGATGTCTGACTCTACCAGC +
Preference number: 5 (lower is better)
Translates to: YVCFCGTRTRSAIWSAKPILRRP*MSDSTS
Trigger: GCTGGTAGAGTCAGACATCAACGGCCTGCGAAGGAT...GGGCTTAGCACTCCAGATGGCTGACCTGGTTCTGGTTCCACAAAAACAGACGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR CAA 90 bp TTTGTGGGTTTTACGTCTGTTTTTGTGGAACCAGAACCAGGTCAGCCATCTGGAGGGTTGCAAGGTAGCTaGCAGTCCTCGCTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: FVGFTSVFVEPEPGQPSGGLQGS*QSSLSS
Trigger: GCTGGAGAGCGAGGACTGCAAGCTACCTTGCAACCC...TCCAGATGGCTGACCTGGTTCTGGTTCCACAAAAACAGACGTAAAACCCACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR CAA 90 bp TTAGGTTTGTGGGTTTTACGTCTGTTTTTGTGGAACCAGAACCAGGTCAGCCATCTTGTGGCACAGGGGTaGCAAGGTAGCTTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: LGLWVLRLFLWNQNQVSHLVAQG*QGSLQS
Trigger: GGACTGCAAGCTACCTTGCAACCCCTGTGCCACAAG...ATGGCTGACCTGGTTCTGGTTCCACAAAAACAGACGTAAAACCCACAAACCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS-3UTR CAA 90 bp GATGCTCTGGCCATTAGGTTTGTGGGTTTTACGTCTGTTTTTGTGGAACCAGAATGGCAGCGTAGGGTGTaGACTTCCTCTTCATGGTTC +
Preference number: 5 (lower is better)
Translates to: DALAIRFVGFTSVFVEPEWQRRV*TSSSWF
Trigger: GAACCATGAAGAGGAAGTCAACACCCTACGCTGCCA...TTCTGGTTCCACAAAAACAGACGTAAAACCCACAAACCTAATGGCCAGAGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2
CDS CAA 72 bp GGGACACAGGGATTGGAGACGCAGGGCCCAATGGGCTaGCCGCATGCATTGCTTGTGGCACAGGGGTTGCAA +
Preference number: 6 (lower is better)
Translates to: GTQGLETQGPMG*PHALLVAQGLQ
Trigger: TTGCAACCCCTGTGCCACAAGCAATGCATGCGGCAAGCCCATTGGGCCCTGCGTCTCCAATCCCTGTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007318.2