Pregenerated sensors for KRT25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035831Ensembl transcript IDs: ENSMUST00000038004.3
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTCACGTTTGCAAGTGACTTCCCTCCAGATGGACGGGGAGTTCTaGCGCTGCTGGCTCAGAAGGAGAAAGGAACAGAAGACAACAGGA | + |
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Preference number: 1 (lower is better) Translates to: PSRLQVTSLQMDGEF*RCWLRRRKEQKTTG Trigger: TCCTGTTGTCTTCTGTTCCTTTCTCCTTCTGAGCCAGCAGCGGCAGAACTCCCCGTCCATCTGGAGGGAAGTCACTTGCAAACGTGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| 3UTR-3UTR CCA 90 bp | CGTCCACAGTCTGCAGCACTGCCACGGACCTTTCAAAGACAAGACAGTGGCAGCGAGTTCTGCCGCTGCTaGCTCAGAAGGAGAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: RPQSAALPRTFQRQDSGSEFCRC*LRRRKE Trigger: TTCCTTTCTCCTTCTGAGCCAGCAGCGGCAGAACTC...GCTGCCACTGTCTTGTCTTTGAAAGGTCCGTGGCAGTGCTGCAGACTGTGGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| 3UTR-3UTR GCA 90 bp | GCGTCCACAGTCTGCAGCACTGCCACGGACCTTTCAAAGACAAGACAGTGGCAGCCCAGACACATTGCATaGCTTGTCTTCTTTGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: ASTVCSTATDLSKTRQWQPRHIA*LVFFEA Trigger: AGCTTCAAAGAAGACAAGGCATGCAATGTGTCTGGG...CTGCCACTGTCTTGTCTTTGAAAGGTCCGTGGCAGTGCTGCAGACTGTGGACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| 3UTR-3UTR TCA 90 bp | GACCTTTCAAAGACAAGACAGTGGCAGCCAGTAGGGGTAAGTTGCTCAAGGAAGTGTAGGGTAATCAGGTaGGCCCTCACGTTTGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: DLSKTRQWQPVGVSCSRKCRVIR*ALTFAS Trigger: ACTTGCAAACGTGAGGGCTCACCTGATTACCCTACA...CTTCCTTGAGCAACTTACCCCTACTGGCTGCCACTGTCTTGTCTTTGAAAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| 3UTR-3UTR GCA 90 bp | GTGTCAGTGGAAGTACTTTTATTCTCTCTGACCTTGTCTAGAAATCCTTGTGAACACAGTCTGCAGCACTaGCACGGACCTTTCAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: VSVEVLLFSLTLSRNPCEHSLQH*HGPFKD Trigger: GTCTTTGAAAGGTCCGTGGCAGTGCTGCAGACTGTG...TTCACAAGGATTTCTAGACAAGGTCAGAGAGAATAAAAGTACTTCCACTGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| 3UTR GCA 72 bp | TTGCAAGTGACTTCCCTCCAGATGGACGGGGAGTTCTaGCGCTGCTGGCTCAGAAGGAGAAAGGAACAGAAG | + |
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Preference number: 3 (lower is better) Translates to: LQVTSLQMDGEF*RCWLRRRKEQK Trigger: CTTCTGTTCCTTTCTCCTTCTGAGCCAGCAGCGGCAGAACTCCCCGTCCATCTGGAGGGAAGTCACTTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| 3UTR GCA 72 bp | AATCCAAAGTCGCTACGCGTCCACAGTCTGCAGCACTaGCACGGACCTTTCAAAGACAAGACAGTGGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: NPKSLRVHSLQH*HGPFKDKTVAA Trigger: GGCTGCCACTGTCTTGTCTTTGAAAGGTCCGTGGCAGTGCTGCAGACTGTGGACGCGTAGCGACTTTGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| 3UTR CCA 72 bp | TGCAGCACTGCCACGGACCTTTCAAAGACAAGACAGTaGCAGCCAGTAGGGGTAAGTTGCTCAAGGAAGGTT | + |
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Preference number: 3 (lower is better) Translates to: CSTATDLSKTRQ*QPVGVSCSRKV Trigger: AACCTTCCTTGAGCAACTTACCCCTACTGGCTGCCACTGTCTTGTCTTTGAAAGGTCCGTGGCAGTGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| 3UTR TCA 72 bp | AAAGAAATGCTGACAGATGGCTGTAGGGTAATCAGGTaGGCCCTCACGTTTGCAAGTGACTTCCCTCCAGAT | + |
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Preference number: 3 (lower is better) Translates to: KEMLTDGCRVIR*ALTFASDFPPD Trigger: ATCTGGAGGGAAGTCACTTGCAAACGTGAGGGCTCACCTGATTACCCTACAGCCATCTGTCAGCATTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| 3UTR-3UTR CAA 90 bp | AATACAAACACTTTATTCCCAGTTGCAGATGAAGAATGCGCCAGGCACACATTTGCCAGTAGGGGTAAGTaGCTCAAGGAAGGTTTATTG | + |
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Preference number: 3 (lower is better) Translates to: NTNTLFPVADEECARHTFASRGK*LKEGLL Trigger: CAATAAACCTTCCTTGAGCAACTTACCCCTACTGGC...AAATGTGTGCCTGGCGCATTCTTCATCTGCAACTGGGAATAAAGTGTTTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| 3UTR TCA 72 bp | CTGTCAAAGTGTCAGTGGAAGTACTTTTATTCTCTCTaGCCTTGTCTAGAAATCCTTGTGAAAACCCGAGGG | + |
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Preference number: 3 (lower is better) Translates to: LSKCQWKYFYSL*PCLEILVKTRG Trigger: CCCTCGGGTTTTCACAAGGATTTCTAGACAAGGTCAGAGAGAATAAAAGTACTTCCACTGACACTTTGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| 3UTR-3UTR CAA 90 bp | GTGGAAGTACTTTTATTCTCTCTGACCTTGTCTAGAAATCCTTGTGAAAACCCGCATTTCCCAGACACATaGCATGCCTTGTCTTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: VEVLLFSLTLSRNPCENPHFPDT*HALSSL Trigger: CAAAGAAGACAAGGCATGCAATGTGTCTGGGAAATG...CGGGTTTTCACAAGGATTTCTAGACAAGGTCAGAGAGAATAAAAGTACTTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| 3UTR GCA 72 bp | AATACAAACACTTTATTCCCAGTTGCAGATGAAGAATaGGCCAGGCACACATTTACCAATGGTGACAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: NTNTLFPVADEE*ARHTFTNGDRK Trigger: TTTCCTGTCACCATTGGTAAATGTGTGCCTGGCGCATTCTTCATCTGCAACTGGGAATAAAGTGTTTGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR GCA 90 bp | CGTCCACAGTCTGCAGCACTGCCACGGACCTTTCAAAGACAAGACAGTGGCAGCCCTCCAGCGGCGCACTaGAGAGCCTGCATTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: RPQSAALPRTFQRQDSGSPPAAH*RACISS Trigger: AGAGGAAATGCAGGCTCTGCAGTGCGCCGCTGGAGG...GCTGCCACTGTCTTGTCTTTGAAAGGTCCGTGGCAGTGCTGCAGACTGTGGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR CCA 90 bp | CCTTTCAAAGACAAGACAGTGGCAGCCAGTAGGGGTAAGTTGCTCAAGGAAGGTAGCCAGCACAGGAGTTaGCCACCCCCGTGTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PFKDKTVAASRGKLLKEGSQHRS*PPPCFL Trigger: GAGGAAACACGGGGGTGGCCAACTCCTGTGCTGGCT...ACCTTCCTTGAGCAACTTACCCCTACTGGCTGCCACTGTCTTGTCTTTGAAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR CCA 90 bp | GACCTTTCAAAGACAAGACAGTGGCAGCCAGTAGGGGTAAGTTGCTCAAGGAAGCCAGAGAGTGTTTCGTaGCCAGGAGAGACTGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: DLSKTRQWQPVGVSCSRKPESVS*PGETAV Trigger: AACTGCAGTCTCTCCTGGCCACGAAACACTCTCTGG...CTTCCTTGAGCAACTTACCCCTACTGGCTGCCACTGTCTTGTCTTTGAAAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR TCA 90 bp | GTGGAAGTACTTTTATTCTCTCTGACCTTGTCTAGAAATCCTTGTGAAAACCCGCACCCACGTCCTCGGTaGTCTGCTGCTGCAGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: VEVLLFSLTLSRNPCENPHPRPR*SAAAAK Trigger: CTTCGCTGCAGCAGCAGATCACCGAGGACGTGGGTG...CGGGTTTTCACAAGGATTTCTAGACAAGGTCAGAGAGAATAAAAGTACTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR TCA 90 bp | GTGGAAGTACTTTTATTCTCTCTGACCTTGTCTAGAAATCCTTGTGAAAACCCGGAGCTCATTCCTGGCTaGGGTGGTGGCACCCACGTC | + |
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Preference number: 4 (lower is better) Translates to: VEVLLFSLTLSRNPCENPELIPG*GGGTHV Trigger: GACGTGGGTGCCACCACCTCAGCCAGGAATGAGCTC...CGGGTTTTCACAAGGATTTCTAGACAAGGTCAGAGAGAATAAAAGTACTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR GCA 90 bp | CCTCACTTCAATACAAACACTTTATTCCCAGTTGCAGATGAAGAATGCGCCAGGACGTCCTCGGTGATCTaGTGCTGCAGCGAAGCACTC | + |
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Preference number: 4 (lower is better) Translates to: PHFNTNTLFPVADEECARTSSVI*CCSEAL Trigger: GAGTGCTTCGCTGCAGCAGCAGATCACCGAGGACGT...CCTGGCGCATTCTTCATCTGCAACTGGGAATAAAGTGTTTGTATTGAAGTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR CCA 90 bp | AGTTTCTTCTGTCAAAGTGTCAGTGGAAGTACTTTTATTCTCTCTGACCTTGTCCCGTGTTTCCTCCTGTaGAGCTGCCCCCGAAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SFFCQSVSGSTFILSDLVPCFLL*SCPRRR Trigger: GCGCCTTCGGGGGCAGCTCCACAGGAGGAAACACGG...GACAAGGTCAGAGAGAATAAAAGTACTTCCACTGACACTTTGACAGAAGAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR TCA 90 bp | CAAACACTTTATTCCCAGTTGCAGATGAAGAATGCGCCAGGCACACATTTACCACAGTGCGGCACAGGGTaGTTTCATCCAGAACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: QTLYSQLQMKNAPGTHLPQCGTG*FHPELC Trigger: GCAGAGTTCTGGATGAAATCACCCTGTGCCGCACTG...TGGTAAATGTGTGCCTGGCGCATTCTTCATCTGCAACTGGGAATAAAGTGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR TCA 90 bp | AATACAAACACTTTATTCCCAGTTGCAGATGAAGAATGCGCCAGGCACACATTTCCCCCTCATTCACAGTaGAGCCAGCACAGGAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: NTNTLFPVADEECARHTFPPHSQ*SQHRSW Trigger: CCAACTCCTGTGCTGGCTTCACTGTGAATGAGGGGG...AAATGTGTGCCTGGCGCATTCTTCATCTGCAACTGGGAATAAAGTGTTTGTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR GCA 90 bp | AGGCTTGCTCATTTCCCAGACACATTGCATGCCTTGTCTTCTTTGAAGCTTTTCAGAAGCCACTTCCAATaGCTGCCACGCCACATGCAT | + |
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Preference number: 4 (lower is better) Translates to: RLAHFPDTLHALSSLKLFRSHFQ*LPRHMH Trigger: ATGCATGTGGCGTGGCAGGCATTGGAAGTGGCTTCT...GAAAAGCTTCAAAGAAGACAAGGCATGCAATGTGTCTGGGAAATGAGCAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR GCA 90 bp | AATACAAACACTTTATTCCCAGTTGCAGATGAAGAATGCGCCAGGCACACATTTTCTGAGCCAGCTGCGTaGAGTAGTTGCCCTCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: NTNTLFPVADEECARHTFSEPAA*SSCPRS Trigger: AGACCGAGGGCAACTACTGCACGCAGCTGGCTCAGA...AAATGTGTGCCTGGCGCATTCTTCATCTGCAACTGGGAATAAAGTGTTTGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR CCA 90 bp | GTGGAAGTACTTTTATTCTCTCTGACCTTGTCTAGAAATCCTTGTGAAAACCCGTCTGCAGTACAGCGTTaGCGTTGCTGGTGGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VEVLLFSLTLSRNPCENPSAVQR*RCWWWR Trigger: CCTCCACCACCAGCAACGCCAACGCTGTACTGCAGA...CGGGTTTTCACAAGGATTTCTAGACAAGGTCAGAGAGAATAAAAGTACTTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR TCA 90 bp | GTGTCAGTGGAAGTACTTTTATTCTCTCTGACCTTGTCTAGAAATCCTTGTGAACTCAGGGTTTCGTACTaGATCTCCAGGTCAGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: VSVEVLLFSLTLSRNPCELRVSY*ISRSVR Trigger: CCGCACTGACCTGGAGATTCAGTACGAAACCCTGAG...TTCACAAGGATTTCTAGACAAGGTCAGAGAGAATAAAAGTACTTCCACTGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR TCA 90 bp | ATACAAACACTTTATTCCCAGTTGCAGATGAAGAATGCGCCAGGCACACATTTATTCGCTTCATTTCGGTaGGCTCATTCCTGGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: IQTLYSQLQMKNAPGTHLFASFR*AHSWLR Trigger: CCTCAGCCAGGAATGAGCTCACCGAAATGAAGCGAA...TAAATGTGTGCCTGGCGCATTCTTCATCTGCAACTGGGAATAAAGTGTTTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR GCA 90 bp | AGTTTCTTCTGTCAAAGTGTCAGTGGAAGTACTTTTATTCTCTCTGACCTTGTCGCCACTTCCAATGCCTaGCACGCCACATGCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: SFFCQSVSGSTFILSDLVATSNA*HATCIS Trigger: GGAAATGCATGTGGCGTGGCAGGCATTGGAAGTGGC...GACAAGGTCAGAGAGAATAAAAGTACTTCCACTGACACTTTGACAGAAGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR CCA 90 bp | CCTCACTTCAATACAAACACTTTATTCCCAGTTGCAGATGAAGAATGCGCCAGGTCAATCTCCAGGGTTTaGAGCGTTCGCTTCATTTCG | + |
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Preference number: 4 (lower is better) Translates to: PHFNTNTLFPVADEECARSISRV*SVRFIS Trigger: CGAAATGAAGCGAACGCTCCAAACCCTGGAGATTGA...CCTGGCGCATTCTTCATCTGCAACTGGGAATAAAGTGTTTGTATTGAAGTGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR GCA 90 bp | GTGGAAGTACTTTTATTCTCTCTGACCTTGTCTAGAAATCCTTGTGAAAACCCGTGGTCAGTATCTTGCTaGGCTGATCCACCTCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: VEVLLFSLTLSRNPCENPWSVSC*ADPPPL Trigger: TAGAGGAGGTGGATCAGCGCAGCAAGATACTGACCA...CGGGTTTTCACAAGGATTTCTAGACAAGGTCAGAGAGAATAAAAGTACTTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR CCA 90 bp | GTGGAAGTACTTTTATTCTCTCTGACCTTGTCTAGAAATCCTTGTGAAAACCCGTTCTCTTCCAGGGAGTaGAGCCTAGTGGTCAGTATC | + |
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Preference number: 4 (lower is better) Translates to: VEVLLFSLTLSRNPCENPFSSRE*SLVVSI Trigger: GATACTGACCACTAGGCTCCACTCCCTGGAAGAGAA...CGGGTTTTCACAAGGATTTCTAGACAAGGTCAGAGAGAATAAAAGTACTTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS TCA 90 bp | TGCCTGCCACGCCACATGCATTTCCAGCTCCGAAGCTGGCTCCCCTaGGCGACCCTGTGCTGGGGCGAGCATAGGACCTCCTGGATCCAC | + |
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Preference number: 5 (lower is better) Translates to: CLPRHMHFQLRSWLP*ATLCWGEHRTSWIH Trigger: GTGGATCCAGGAGGTCCTATGCTCGCCCCAGCACAGGGTCGCTCAGGGGAGCCAGCTTCGGAGCTGGAAATGCATGTGGCGTGGCAGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS GCA 90 bp | TCATTCCTGGCTGAGGTGGTGGCACCCACGTCCTCGGTGATCTGCTaGTGCAGCGAAGCACTCTTCTCTTGGAACCAGGCCTCAGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: SFLAEVVAPTSSVIC*CSEALFSWNQASAS Trigger: GGACGCTGAGGCCTGGTTCCAAGAGAAGAGTGCTTCGCTGCAGCAGCAGATCACCGAGGACGTGGGTGCCACCACCTCAGCCAGGAATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS GCA 90 bp | AGCTCATTCCTGGCTGAGGTGGTGGCACCCACGTCCTCGGTGATCTaGTGCTGCAGCGAAGCACTCTTCTCTTGGAACCAGGCCTCAGCG | + |
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Preference number: 5 (lower is better) Translates to: SSFLAEVVAPTSSVI*CCSEALFSWNQASA Trigger: CGCTGAGGCCTGGTTCCAAGAGAAGAGTGCTTCGCTGCAGCAGCAGATCACCGAGGACGTGGGTGCCACCACCTCAGCCAGGAATGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR CAA 90 bp | CGTCCACAGTCTGCAGCACTGCCACGGACCTTTCAAAGACAAGACAGTGGCAGCAAGCCAGCACAGGAGTaGGCCACCCCCGTGTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: RPQSAALPRTFQRQDSGSKPAQE*ATPVFP Trigger: AGGAAACACGGGGGTGGCCAACTCCTGTGCTGGCTT...GCTGCCACTGTCTTGTCTTTGAAAGGTCCGTGGCAGTGCTGCAGACTGTGGACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR CAA 90 bp | CGTCCACAGTCTGCAGCACTGCCACGGACCTTTCAAAGACAAGACAGTGGCAGCCGAAGCACTCTTCTCTaGGAACCAGGCCTCAGCGTC | + |
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Preference number: 5 (lower is better) Translates to: RPQSAALPRTFQRQDSGSRSTLL*EPGLSV Trigger: GACGCTGAGGCCTGGTTCCAAGAGAAGAGTGCTTCG...GCTGCCACTGTCTTGTCTTTGAAAGGTCCGTGGCAGTGCTGCAGACTGTGGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS TCA 90 bp | TTCTCTTCCAGGGAGTGGAGCCTAGTGGTCAGTATCTTGCTGCGCTaGTCCACCTCCTCTAGAACCTTCTTAACCACTATGGCTTTGACT | + |
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Preference number: 5 (lower is better) Translates to: FSSREWSLVVSILLR*STSSRTFLTTMALT Trigger: AGTCAAAGCCATAGTGGTTAAGAAGGTTCTAGAGGAGGTGGATCAGCGCAGCAAGATACTGACCACTAGGCTCCACTCCCTGGAAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR CAA 90 bp | AGGCTTGCTCATTTCCCAGACACATTGCATGCCTTGTCTTCTTTGAAGCTTTTCAGTACAGCGTTGGCGTaGCTGGTGGTGGAGGTGATG | + |
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Preference number: 5 (lower is better) Translates to: RLAHFPDTLHALSSLKLFSTALA*LVVEVM Trigger: CATCACCTCCACCACCAGCAACGCCAACGCTGTACT...GAAAAGCTTCAAAGAAGACAAGGCATGCAATGTGTCTGGGAAATGAGCAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR CAA 90 bp | GTCTACCTCACTTCAATACAAACACTTTATTCCCAGTTGCAGATGAAGAATGCGATCTGCAGTACAGCGTaGGCGTTGCTGGTGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: VYLTSIQTLYSQLQMKNAICSTA*ALLVVE Trigger: CTCCACCACCAGCAACGCCAACGCTGTACTGCAGAT...CGCATTCTTCATCTGCAACTGGGAATAAAGTGTTTGTATTGAAGTGAGGTAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR CAA 90 bp | GATGTCTACCTCACTTCAATACAAACACTTTATTCCCAGTTGCAGATGAAGAATGCCGTGAGCCTGGCATaGTCAATCTGCAGTACAGCG | + |
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Preference number: 5 (lower is better) Translates to: DVYLTSIQTLYSQLQMKNAVSLA*SICSTA Trigger: CGCTGTACTGCAGATTGACAATGCCAGGCTCACGGC...ATTCTTCATCTGCAACTGGGAATAAAGTGTTTGTATTGAAGTGAGGTAGACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR CAA 90 bp | TTATTGGATGTCTACCTCACTTCAATACAAACACTTTATTCCCAGTTGCAGATGTTCAATCTCCAGGGTTaGGAGCGTTCGCTTCATTTC | + |
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Preference number: 5 (lower is better) Translates to: LLDVYLTSIQTLYSQLQMFNLQG*ERSLHF Trigger: GAAATGAAGCGAACGCTCCAAACCCTGGAGATTGAA...CATCTGCAACTGGGAATAAAGTGTTTGTATTGAAGTGAGGTAGACATCCAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS-3UTR CAA 90 bp | GATGTCTACCTCACTTCAATACAAACACTTTATTCCCAGTTGCAGATGAAGAATTTAACCACTATGGCTTaGACTGGATCTTTGATTTGG | + |
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Preference number: 5 (lower is better) Translates to: DVYLTSIQTLYSQLQMKNLTTMA*TGSLIW Trigger: CCAAATCAAAGATCCAGTCAAAGCCATAGTGGTTAA...ATTCTTCATCTGCAACTGGGAATAAAGTGTTTGTATTGAAGTGAGGTAGACATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS GCA 72 bp | GCTGAGGTGGTGGCACCCACGTCCTCGGTGATCTGCTaGTGCAGCGAAGCACTCTTCTCTTGGAACCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: AEVVAPTSSVIC*CSEALFSWNQA Trigger: GGCCTGGTTCCAAGAGAAGAGTGCTTCGCTGCAGCAGCAGATCACCGAGGACGTGGGTGCCACCACCTCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS TCA 72 bp | GAGCGTTCGCTTCATTTCGGTGAGCTCATTCCTGGCTaGGGTGGTGGCACCCACGTCCTCGGTGATCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: ERSLHFGELIPG*GGGTHVLGDLL Trigger: CAGCAGATCACCGAGGACGTGGGTGCCACCACCTCAGCCAGGAATGAGCTCACCGAAATGAAGCGAACGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS TCA 72 bp | AGGGAGTGGAGCCTAGTGGTCAGTATCTTGCTGCGCTaGTCCACCTCCTCTAGAACCTTCTTAACCACTATG | + |
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Preference number: 6 (lower is better) Translates to: REWSLVVSILLR*STSSRTFLTTM Trigger: CATAGTGGTTAAGAAGGTTCTAGAGGAGGTGGATCAGCGCAGCAAGATACTGACCACTAGGCTCCACTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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| CDS CAA 72 bp | TCCACCTCCTCTAGAACCTTCTTAACCACTATGGCTTaGACTGGATCTTTGATTTGGTTTCCGGCGTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: STSSRTFLTTMA*TGSLIWFPAFP Trigger: TGGAAACGCCGGAAACCAAATCAAAGATCCAGTCAAAGCCATAGTGGTTAAGAAGGTTCTAGAGGAGGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038004.3 |
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