Pregenerated sensors for KRT24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020913Ensembl transcript IDs: ENSMUST00000017255.4
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCGCACCCCCGTCTCCGTTaGGCAGGCGGCGGTAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: PESEPAQWSVWCGCFTGSHPRLR*AGGGRS Trigger: AGACCTACCGCCGCCTGCTCAACGGAGACGGGGGTG...CGAGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR TCA 90 bp | CCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCGCGAATCCACCCCTTACTaGGCAGCTGCCGAAGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: PRVSRHNGQSGVGVSLARESTPY*AAAEAP Trigger: GGGGGCTTCGGCAGCTGCTCAGTAAGGGGTGGATTC...GCGAGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR GCA 90 bp | CCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCGCAGGAACTTCCCCCAGTaGACCCCCTGCTGCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: PRVSRHNGQSGVGVSLARRNFPQ*TPCCPQ Trigger: CTGTGGGCAGCAGGGGGTGCACTGGGGGAAGTTCCT...GCGAGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR GCA 90 bp | GCAGGTTTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCAGGCTCCAGCTGTTGCTaGTCCCCTGGAAGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AGFPRVSRHNGQSGVGVSGSSCC*SPGSPR Trigger: CCTGGGGCTTCCAGGGGAGCAGCAACAGCTGGAGCC...TGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAAACCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR GCA 90 bp | TTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCCCCTAGCCCACAGCTaGTCCCACCGCCAAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: FPRVSRHNGQSGVGVSLAPLAHS*SHRQRN Trigger: GTTCCTTTGGCGGTGGGAGCAGCTGTGGGCTAGGGG...AGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR GCA 90 bp | TTTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCAGGCTCCAGCTGTTaGTGCTCCCCTGGAAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPESEPAQWSVWCGCFTGSGSSC*CSPGSP Trigger: GGGGCTTCCAGGGGAGCAGCAACAGCTGGAGCCTGA...GCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR GCA 90 bp | AGCAGGTTTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCCCCTTACTGAGCAGCTaGCGAAGCCCCCTCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: SRFPESEPAQWSVWCGCFPLLSS*RSPLPC Trigger: GCATGGGAGGGGGCTTCGGCAGCTGCTCAGTAAGGG...GAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAAACCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR CCA 90 bp | TTTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCCTGTTGCTGCTCCCCTaGAAGCCCCAGGCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FPESEPAQWSVWCGCFTGLLLLP*KPQAEP Trigger: AGGCTCTGCCTGGGGCTTCCAGGGGAGCAGCAACAG...GCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR CCA 90 bp | CCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCGTGTCTCTCAGCTTCCTaGCGGTTCTGCTCGGCCATC | + |
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Preference number: 4 (lower is better) Translates to: PESEPAQWSVWCGCFTGSCLSAS*RFCSAI Trigger: GATGGCCGAGCAGAACCGCCAGGAAGCTGAGAGACA...CGAGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR TCA 90 bp | CCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCGGGCTTCCCCTGCATCTaGAGAGATTTGGGCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PESEPAQWSVWCGCFTGSGFPCI*RDLGLQ Trigger: CTGCAAGCCCAAATCTCTTCAGATGCAGGGGAAGCC...CGAGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR CCA 90 bp | TTTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCGTCTCAGCCCGGATCTaGCTAAGCTGCTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPESEPAQWSVWCGCFTGVSARI*LSCSSR Trigger: CCTGGAGGAGCAGCTTAGCCAGATCCGGGCTGAGAC...GCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR CCA 90 bp | GCAGGTTTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCATCGTACTCAGCACTCTaGCACTGGGTCTCAGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGFPRVSRHNGQSGVGVSSYSAL*HWVSAR Trigger: CCGGGCTGAGACCCAGTGCCAGAGTGCTGAGTACGA...TGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAAACCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR GCA 90 bp | CCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCGCCAGGCTGCTAATCTGTaGCTGGATTCCAGACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PRVSRHNGQSGVGVSLARQAANL*LDSRQL Trigger: CAGCTGTCTGGAATCCAGGCACAGATTAGCAGCCTG...GCGAGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR TCA 90 bp | CCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCGGCCAGCACAGCTTCCTaGGTCACTCAATACCACATT | + |
|
Preference number: 4 (lower is better) Translates to: PESEPAQWSVWCGCFTGSASTAS*VTQYHI Trigger: AATGTGGTATTGAGTGACTCAGGAAGCTGTGCTGGC...CGAGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR CCA 90 bp | CCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCGTGTCATTCAGTAGTTTaGTCAGGTCGACTCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PESEPAQWSVWCGCFTGSCHSVV*SGRLLG Trigger: CCCCAGGAGTCGACCTGACCAAACTACTGAATGACA...CGAGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR TCA 90 bp | CCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCGTGCCATACCAGTCCTTaGTTTTACACTCCAGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: PESEPAQWSVWCGCFTGSCHTSP*FYTPDP Trigger: CGGATCTGGAGTGTAAAATCAAGGACTGGTATGGCA...CGAGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR TCA 90 bp | TTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCCACCACCTCCTCTATaGTGGTCTTTGTCACCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FPRVSRHNGQSGVGVSLAPPPPL*WSLSPL Trigger: CAAGGGTGACAAAGACCATCATAGAGGAGGTGGTGG...AGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR CCA 90 bp | TTTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCCTGGGATCTTTTCCTTaGCCAGCACAGCTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FPESEPAQWSVWCGCFTGLGSFP*PAQLPE Trigger: CTCAGGAAGCTGTGCTGGCCAAGGAAAAGATCCCAG...GCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR GCA 90 bp | CCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCGCGTGGCTGAAAGGATCTaGTTCTTCAGATCTTCGATG | + |
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Preference number: 4 (lower is better) Translates to: PRVSRHNGQSGVGVSLARVAERI*FFRSSM Trigger: CATCGAAGATCTGAAGAAGCAGATCCTTTCAGCCAC...GCGAGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR TCA 90 bp | TTTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCGTTTTCACAAGTGGCTaGAAGGATCTGCTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPESEPAQWSVWCGCFTGVFTSG*KDLLLQ Trigger: CTGAAGAAGCAGATCCTTTCAGCCACTTGTGAAAAC...GCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR TCA 90 bp | TTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCTTCAGAAATGTTGCTaGCTTGAGACGAGACAACTC | + |
|
Preference number: 4 (lower is better) Translates to: FPRVSRHNGQSGVGVSLALQKCC*LETRQL Trigger: GAGTTGTCTCGTCTCAAGTCAGCAACATTTCTGAAG...AGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR GCA 90 bp | TTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCGGTCATTGAGGTCTTaGATAGTTTGCTTTTCGCTT | + |
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Preference number: 4 (lower is better) Translates to: FPRVSRHNGQSGVGVSLARSLRS*IVCFSL Trigger: AAGCGAAAAGCAAACTATGCAAGACCTCAATGACCG...AGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR GCA 90 bp | TTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCGAAGGCAGAGTTCATaGTCATACTTCATTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: FPRVSRHNGQSGVGVSLARRQSS*SYFILK Trigger: CTTCAGAATGAAGTATGAGCATGAACTCTGCCTTCG...AGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| 3UTR CAA 72 bp | ATAAGAGGAAGCAGAAAATGGGCAGGTCAGCTAATTTaGGGTAGCAGGTTTCCCGAGAGTGAGCCGGCACAA | + |
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Preference number: 4 (lower is better) Translates to: IRGSRKWAGQLI*GSRFPESEPAQ Trigger: TTGTGCCGGCTCACTCTCGGGAAACCTGCTACCCAAAATTAGCTGACCTGCCCATTTTCTGCTTCCTCTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR GCA 90 bp | AGCTACAGAAACAGTCAGAGCCAATTTCTCCTTACTACTTTAAAGAGAACGTTCTTGGGCTTGCAGGGATaGACTCCGCTCGTTGAACTG | + |
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Preference number: 4 (lower is better) Translates to: SYRNSQSQFLLTTLKRTFLGLQG*TPLVEL Trigger: CAGTTCAACGAGCGGAGTGCATCCCTGCAAGCCCAA...GAACGTTCTCTTTAAAGTAGTAAGGAGAAATTGGCTCTGACTGTTTCTGTAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR CCA 90 bp | TTGAGCTACAGAAACAGTCAGAGCCAATTTCTCCTTACTACTTTAAAGAGAACGCACTCCTGGCGCAATTaGCTTCCCCTGCATCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LSYRNSQSQFLLTTLKRTHSWRN*LPLHLK Trigger: CTTCAGATGCAGGGGAAGCCAATTGCGCCAGGAGTG...CGTTCTCTTTAAAGTAGTAAGGAGAAATTGGCTCTGACTGTTTCTGTAGCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR GCA 90 bp | TTGAGCTACAGAAACAGTCAGAGCCAATTTCTCCTTACTACTTTAAAGAGAACGCCAGGGTCTGCACTGTaGGCTTCAATTCCATTACTT | + |
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Preference number: 4 (lower is better) Translates to: LSYRNSQSQFLLTTLKRTPGSAL*ASIPLL Trigger: AAGTAATGGAATTGAAGCGCACAGTGCAGACCCTGG...CGTTCTCTTTAAAGTAGTAAGGAGAAATTGGCTCTGACTGTTTCTGTAGCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR GCA 90 bp | AGCTACAGAAACAGTCAGAGCCAATTTCTCCTTACTACTTTAAAGAGAACGTTCTTGTCACCCTTGTCTTaGTGGGATCTTTTCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: SYRNSQSQFLLTTLKRTFLSPLS*WDLFLG Trigger: GCCAAGGAAAAGATCCCAGCAAGACAAGGGTGACAA...GAACGTTCTCTTTAAAGTAGTAAGGAGAAATTGGCTCTGACTGTTTCTGTAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR TCA 90 bp | TTGAGCTACAGAAACAGTCAGAGCCAATTTCTCCTTACTACTTTAAAGAGAACGGAAATGTTGCTGACTTaGGACGAGACAACTCTACCA | + |
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Preference number: 4 (lower is better) Translates to: LSYRNSQSQFLLTTLKRTEMLLT*DETTLP Trigger: TGGTAGAGTTGTCTCGTCTCAAGTCAGCAACATTTC...CGTTCTCTTTAAAGTAGTAAGGAGAAATTGGCTCTGACTGTTTCTGTAGCTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR TCA 90 bp | TTGAGCTACAGAAACAGTCAGAGCCAATTTCTCCTTACTACTTTAAAGAGAACGTCTTCAGATCTTCGATaGTTGAGTAGTATTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LSYRNSQSQFLLTTLKRTSSDLR*LSSIGC Trigger: ACAGCCAATACTACTCAATCATCGAAGATCTGAAGA...CGTTCTCTTTAAAGTAGTAAGGAGAAATTGGCTCTGACTGTTTCTGTAGCTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS TCA 90 bp | CGACCCTCCACCGTAGCTAGAGGCTGCTCCGAATCCACCCCTTACTaGGCAGCTGCCGAAGCCCCCTCCCATGCTACCCTTAGATCCCCC | + |
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Preference number: 5 (lower is better) Translates to: RPSTVARGCSESTPY*AAAEAPSHATLRSP Trigger: GGGGGATCTAAGGGTAGCATGGGAGGGGGCTTCGGCAGCTGCTCAGTAAGGGGTGGATTCGGAGCAGCCTCTAGCTACGGTGGAGGGTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR CAA 90 bp | GCAGGTTTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTCAGGCTCCAGCTGTaGCTGCTCCCCTGGAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: AGFPRVSRHNGQSGVGVSLRLQL*LLPWKP Trigger: GGGCTTCCAGGGGAGCAGCAACAGCTGGAGCCTGAG...TGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAAACCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR CAA 90 bp | CCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCACTGGCTCGTGCTCCAGGCGGGTCTaGATGTTCAGCAGGCATTCG | + |
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Preference number: 5 (lower is better) Translates to: PESEPAQWSVWCGCFTGSCSRRV*MFSRHS Trigger: CGAATGCCTGCTGAACATCAAGACCCGCCTGGAGCA...CGAGCCAGTGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR CAA 90 bp | GCAGGTTTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCAGCAGCCAGCCTAGCGTaGTCAATCTGCAGAGTCATT | + |
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Preference number: 5 (lower is better) Translates to: AGFPRVSRHNGQSGVGVSAASLA*SICRVI Trigger: AATGACTCTGCAGATTGACAACGCTAGGCTGGCTGC...TGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAAACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR CAA 90 bp | AGCAGGTTTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCATGTCATTCAGTAGTTaGGTCAGGTCGACTCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SRFPESEPAQWSVWCGCFMSFSS*VRSTPG Trigger: CCCAGGAGTCGACCTGACCAAACTACTGAATGACAT...GAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAAACCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS CCA 90 bp | TCTGCACTGTGCGCTTCAATTCCATTACTTCACTCCTGGCGCAATTaGCTTCCCCTGCATCTGAAGAGATTTGGGCTTGCAGGGATGCAC | + |
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Preference number: 5 (lower is better) Translates to: SALCASIPLLHSWRN*LPLHLKRFGLAGMH Trigger: GTGCATCCCTGCAAGCCCAAATCTCTTCAGATGCAGGGGAAGCCAATTGCGCCAGGAGTGAAGTAATGGAATTGAAGCGCACAGTGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS-3UTR CAA 90 bp | GCAGGTTTCCCGAGAGTGAGCCGGCACAATGGTCAGTCTGGTGTGGGTGTTTCAAGAAATGTTGCTGACTaGAGACGAGACAACTCTACC | + |
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Preference number: 5 (lower is better) Translates to: AGFPRVSRHNGQSGVGVSRNVAD*RRDNST Trigger: GGTAGAGTTGTCTCGTCTCAAGTCAGCAACATTTCT...TGAAACACCCACACCAGACTGACCATTGTGCCGGCTCACTCTCGGGAAACCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS TCA 90 bp | CGTTTTCACAAGTGGCTGAAAGGATCTGCTTCTTCAGATCTTCGATaGTTGAGTAGTATTGGCTGTAGTCTCTTCCAGACCCACCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: RFHKWLKGSASSDLR*LSSIGCSLFQTHLL Trigger: TAAAAGGTGGGTCTGGAAGAGACTACAGCCAATACTACTCAATCATCGAAGATCTGAAGAAGCAGATCCTTTCAGCCACTTGTGAAAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS TCA 72 bp | ACCGTAGCTAGAGGCTGCTCCGAATCCACCCCTTACTaGGCAGCTGCCGAAGCCCCCTCCCATGCTACCCTT | + |
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Preference number: 6 (lower is better) Translates to: TVARGCSESTPY*AAAEAPSHATL Trigger: AAGGGTAGCATGGGAGGGGGCTTCGGCAGCTGCTCAGTAAGGGGTGGATTCGGAGCAGCCTCTAGCTACGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS GCA 72 bp | CTCTGGCACTGGGTCTCAGCCCGGATCTGGCTAAGCTaGTCCTCCAGGCTGCTAATCTGTGCCTGGATTCCA | + |
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Preference number: 6 (lower is better) Translates to: LWHWVSARIWLS*SSRLLICAWIP Trigger: TGGAATCCAGGCACAGATTAGCAGCCTGGAGGAGCAGCTTAGCCAGATCCGGGCTGAGACCCAGTGCCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS TCA 72 bp | AAGAGATTTGGGCTTGCAGGGATGCACTCCGCTCGTTaGACTGTCTCTCAGCTTCCTGGCGGTTCTGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: KRFGLAGMHSAR*TVSQLPGGSAR Trigger: CCGAGCAGAACCGCCAGGAAGCTGAGAGACAGTTCAACGAGCGGAGTGCATCCCTGCAAGCCCAAATCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS CAA 72 bp | GAAGAGATTTGGGCTTGCAGGGATGCACTCCGCTCGTaGAACTGTCTCTCAGCTTCCTGGCGGTTCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: EEIWACRDALRS*NCLSASWRFCS Trigger: CGAGCAGAACCGCCAGGAAGCTGAGAGACAGTTCAACGAGCGGAGTGCATCCCTGCAAGCCCAAATCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS CAA 90 bp | GTCTGCACTGTGCGCTTCAATTCCATTACTTCACTCCTGGCGCAATaGGCTTCCCCTGCATCTGAAGAGATTTGGGCTTGCAGGGATGCA | + |
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Preference number: 6 (lower is better) Translates to: VCTVRFNSITSLLAQ*ASPASEEIWACRDA Trigger: TGCATCCCTGCAAGCCCAAATCTCTTCAGATGCAGGGGAAGCCAATTGCGCCAGGAGTGAAGTAATGGAATTGAAGCGCACAGTGCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS CAA 72 bp | ACCACCTCCTCTATGATGGTCTTTGTCACCCTTGTCTaGCTGGGATCTTTTCCTTGGCCAGCACAGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: TTSSMMVFVTLV*LGSFPWPAQLP Trigger: AGGAAGCTGTGCTGGCCAAGGAAAAGATCCCAGCAAGACAAGGGTGACAAAGACCATCATAGAGGAGGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS CCA 72 bp | TGCGCTTCAATTCCATTACTTCACTCCTGGCGCAATTaGCTTCCCCTGCATCTGAAGAGATTTGGGCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: CASIPLLHSWRN*LPLHLKRFGLA Trigger: TGCAAGCCCAAATCTCTTCAGATGCAGGGGAAGCCAATTGCGCCAGGAGTGAAGTAATGGAATTGAAGCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS CCA 72 bp | GTCTTTGTCACCCTTGTCTTGCTGGGATCTTTTCCTTaGCCAGCACAGCTTCCTGAGTCACTCAATACCACA | + |
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Preference number: 6 (lower is better) Translates to: VFVTLVLLGSFP*PAQLPESLNTT Trigger: TGTGGTATTGAGTGACTCAGGAAGCTGTGCTGGCCAAGGAAAAGATCCCAGCAAGACAAGGGTGACAAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS CAA 72 bp | CCACCTTTTACAGACCCATGCTTGCCATACCAGTCCTaGATTTTACACTCCAGATCCGTGTTGGCTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PPFTDPCLPYQS*ILHSRSVLASS Trigger: GGAGGAAGCCAACACGGATCTGGAGTGTAAAATCAAGGACTGGTATGGCAAGCATGGGTCTGTAAAAGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS TCA 72 bp | CACCTTTTACAGACCCATGCTTGCCATACCAGTCCTTaGTTTTACACTCCAGATCCGTGTTGGCTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: HLLQTHACHTSP*FYTPDPCWLPP Trigger: TGGAGGAAGCCAACACGGATCTGGAGTGTAAAATCAAGGACTGGTATGGCAAGCATGGGTCTGTAAAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS CCA 72 bp | CAGCACAGCTTCCTGAGTCACTCAATACCACATTCTTaGATACTAAGTTTCTATAGTCACATCCACCCCCGT | + |
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Preference number: 6 (lower is better) Translates to: QHSFLSHSIPHS*ILSFYSHIHPR Trigger: ACGGGGGTGGATGTGACTATAGAAACTTAGTATCCAAGAATGTGGTATTGAGTGACTCAGGAAGCTGTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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| CDS TCA 72 bp | AAGTGGCTGAAAGGATCTGCTTCTTCAGATCTTCGATaGTTGAGTAGTATTGGCTGTAGTCTCTTCCAGACC | + |
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Preference number: 6 (lower is better) Translates to: KWLKGSASSDLR*LSSIGCSLFQT Trigger: GGTCTGGAAGAGACTACAGCCAATACTACTCAATCATCGAAGATCTGAAGAAGCAGATCCTTTCAGCCACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017255.4 |
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