Pregenerated sensors for KRT23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006777Ensembl transcript IDs: ENSMUST00000006969.8
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCGCGGTCCATGGACACTCGGTaGCCGATGGCAGCTCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: FLNLKTPRISVETHPLARSMDTR*PMAAPL Trigger: CAGGGGAGCTGCCATCGGGCACCGAGTGTCCATGGA...CCGCGCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR GCA 90 bp | AAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCGATGCGGACACCCCCTaGGCCTCCATGGACACTCGG | + |
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Preference number: 4 (lower is better) Translates to: KVSESENSKDFRRDSPISDADTP*ASMDTR Trigger: CCGAGTGTCCATGGAGGCGCAGGGGGTGTCCGCATC...GCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR TCA 90 bp | TTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCGCGGCTTCGTAGTGGGAGATaGTCTGCTGCATGTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: FLNLKTPRISVETHPLARLRSGR*SAACPG Trigger: TCCAGGACATGCAGCAGATCATCTCCCACTACGAAG...CCGCGCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR TCA 90 bp | TATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACGGCAGCCTGGCGTGGTaGAGGAAAGGGAGATGCGGA | + |
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Preference number: 4 (lower is better) Translates to: YREKFLNLKTPRISVETHGSLAW*RKGRCG Trigger: TCCGCATCTCCCTTTCCTTCACCACGCCAGGCTGCC...GTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR GCA 90 bp | AAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCTGGGAGATGATCTGCTaGATGTCCTGGAGACGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KVSESENSKDFRRDSPISWEMIC*MSWRRQ Trigger: CTGCCGTCTCCAGGACATGCAGCAGATCATCTCCCA...GCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CCA 90 bp | TTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCGCGGTCAATCTCTAGGGCCTaGAATGTTCTCCTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLNLKTPRISVETHPLARSISRA*NVLLSS Trigger: TGAGCTGAGGAGAACATTCCAGGCCCTAGAGATTGA...CCGCGCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR TCA 90 bp | CATTATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTTCTTCCAGACCCCCATaGTCCTCCAGGAGGCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: HYREKFLNLKTPRISVETSSRPP*SSRRQA Trigger: TGCCTGCCTCCTGGAGGATCATGGGGGTCTGGAAGA...AGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR TCA 90 bp | TATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACGCTCCTGCAGGCGGCTaGTGTTTTCCTCATACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YREKFLNLKTPRISVETHAPAGG*CFPHTG Trigger: CCCAGTATGAGGAAAACATCAGCCGCCTGCAGGAGC...GTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR TCA 90 bp | TTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCGCGGTTTCAAACTTCAGGTTaGAGTCATCCACTGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: FLNLKTPRISVETHPLARFQTSG*SHPLPS Trigger: GGATGGCAGTGGATGACTTCAACCTGAAGTTTGAAA...CCGCGCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR GCA 90 bp | CATTATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTTGGTGGCCTTGCCATTaGCACCTAGCAGGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: HYREKFLNLKTPRISVETWWPCH*HLAGDC Trigger: GCAGTCCCCTGCTAGGTGGCAATGGCAAGGCCACCA...AGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CCA 90 bp | TTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCGCGGTCCATTTCCTGCTCATaGCGTTTCTTCATGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: FLNLKTPRISVETHPLARSISCS*RFFMRI Trigger: GATCCTCATGAAGAAACGCCATGAGCAGGAAATGGA...CCGCGCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CCA 90 bp | AAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCGTTTTCCTGCTGTGCTaGGCCTGCAGGTCAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVSESENSKDFRRDSPISVFLLC*ACRSIS Trigger: AGAGATTGACCTGCAGGCCCAGCACAGCAGGAAAAC...GCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR GCA 90 bp | CATTATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTTCTGCATGGTGGCCTTaGCATTGCCACCTAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: HYREKFLNLKTPRISVETSAWWP*HCHLAG Trigger: CCCTGCTAGGTGGCAATGGCAAGGCCACCATGCAGA...AGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR GCA 90 bp | CATTATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCCAAAGCGGTTTTCCTaGTGTGCTGGGCCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HYREKFLNLKTPRISVETPKRFS*CAGPAG Trigger: ACCTGCAGGCCCAGCACAGCAGGAAAACCGCTTTGG...AGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR TCA 90 bp | TATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCTGGGTTCTCTCTCCTaGTGCCACCTTAGTATACGG | + |
|
Preference number: 4 (lower is better) Translates to: YREKFLNLKTPRISVETHLGSLS*CHLSIR Trigger: CCGTATACTAAGGTGGCATCAGGAGAGAGAACCCAG...GTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR TCA 90 bp | AAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCGTTCCAGGTCTGTTGTaGCAATGGTCAGATCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KVSESENSKDFRRDSPISVPGLL*QWSDHP Trigger: TGGATGATCTGACCATTGTCACAACAGACCTGGAAC...GCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR TCA 90 bp | TATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACTTGTGTTCATTGTTCTaGCGCTCCAGGTCTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YREKFLNLKTPRISVETHLCSLF*RSRSWR Trigger: CCGCCAAGACCTGGAGCGTCAGAACAATGAACACAA...GTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR GCA 90 bp | TTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCGCGGATTAACTCGTATTCCTaGCTCATATCTTCCAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: FLNLKTPRISVETHPLARINSYS*LISSKT Trigger: GGTCTTGGAAGATATGAGGCAGGAATACGAGTTAAT...CCGCGCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR GCA 90 bp | TATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCGATCGTTGAGATTCTaGATGGTGGCCTTGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: YREKFLNLKTPRISVETHRSLRF*MVALPL Trigger: CAATGGCAAGGCCACCATGCAGAATCTCAACGATCG...GTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CCA 90 bp | TATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACAATCCTTTCTGTGGCTaGGTTCTCTCTCCTGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: YREKFLNLKTPRISVETHNPFCG*VLSPDA Trigger: GGCATCAGGAGAGAGAACCCAGCCACAGAAAGGATT...GTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR GCA 90 bp | TATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACGTTGAAGTCATCCACTaGCATCCTGGCGTTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YREKFLNLKTPRISVETHVEVIH*HPGVVN Trigger: ATTGACAACGCCAGGATGGCAGTGGATGACTTCAAC...GTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CCA 90 bp | TATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACGTTCTCCTCAGCTCATaGATATCACTTTGGTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: YREKFLNLKTPRISVETHVLLSS*ISLWLP Trigger: GGGCAACCAAAGTGATATCCATGAGCTGAGGAGAAC...GTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CCA 90 bp | CATTATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTATTTCCTTCTCCAGGTaGGTTTTGATGCCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HYREKFLNLKTPRISVETISFSR*VLMPSS Trigger: GCTGCTGGGCATCAAAACCCACCTGGAGAAGGAAAT...AGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR TCA 90 bp | CATTATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTAGATCCTTTCAGCCTTaGCTCAGATCCATCCATCGT | + |
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Preference number: 4 (lower is better) Translates to: HYREKFLNLKTPRISVETRSFQP*LRSIHR Trigger: ACGATGGATGGATCTGAGTCAAGGCTGAAAGGATCT...AGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR TCA 90 bp | AAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCTGGATCTCATTCACTTaGGAAAGAACGATTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: KVSESENSKDFRRDSPISWISFT*ERTILP Trigger: TGGAAGAATCGTTCTTTCTCAAGTGAATGAGATCCA...GCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS TCA 90 bp | CCAGGTCTTGGCGGAGCTGAATCAGCTCTTCTTCGTAGTGGGAGATaGTCTGCTGCATGTCCTGGAGACGGCAGGAGTATCGAGCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: PGLGGAESALLRSGR*SAACPGDGRSIEPG Trigger: CCCGGGCTCGATACTCCTGCCGTCTCCAGGACATGCAGCAGATCATCTCCCACTACGAAGAAGAGCTGATTCAGCTCCGCCAAGACCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS GCA 90 bp | CTAGGGCCTGGAATGTTCTCCTCAGCTCATGGATATCACTTTGGTTaGCCTGTACAGGCGCTGGACTGGCCACTTCCTGGGCCATGGCGG | + |
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Preference number: 5 (lower is better) Translates to: LGPGMFSSAHGYHFG*PVQALDWPLPGPWR Trigger: CCGCCATGGCCCAGGAAGTGGCCAGTCCAGCGCCTGTACAGGGCAACCAAAGTGATATCCATGAGCTGAGGAGAACATTCCAGGCCCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS TCA 90 bp | GCCCTGTACAGGCGCTGGACTGGCCACTTCCTGGGCCATGGCGGCTaGCTGCTCTCTGAACCAGGTGTCCAACTCTTGATGTTTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: ALYRRWTGHFLGHGG*LLSEPGVQLLMFLL Trigger: AAGAAGAAACATCAAGAGTTGGACACCTGGTTCAGAGAGCAGTCAGCCGCCATGGCCCAGGAAGTGGCCAGTCCAGCGCCTGTACAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS CCA 90 bp | ATATCACTTTGGTTGCCCTGTACAGGCGCTGGACTGGCCACTTCCTaGGCCATGGCGGCTGACTGCTCTCTGAACCAGGTGTCCAACTCT | + |
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Preference number: 5 (lower is better) Translates to: ISLWLPCTGAGLATS*AMAADCSLNQVSNS Trigger: AGAGTTGGACACCTGGTTCAGAGAGCAGTCAGCCGCCATGGCCCAGGAAGTGGCCAGTCCAGCGCCTGTACAGGGCAACCAAAGTGATAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS CCA 90 bp | AAGTCATCCACTGCCATCCTGGCGTTGTCAATGAGCACGACAATGTaGGCATTGGCCATCTTACCGTCCACTATCTGCTCCTGCAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: KSSTAILALSMSTTM*ALAILPSTICSCRR Trigger: CCGCCTGCAGGAGCAGATAGTGGACGGTAAGATGGCCAATGCCCACATTGTCGTGCTCATTGACAACGCCAGGATGGCAGTGGATGACTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS CCA 90 bp | ATCTCTAGGGCCTGGAATGTTCTCCTCAGCTCATGGATATCACTTTaGTTGCCCTGTACAGGCGCTGGACTGGCCACTTCCTGGGCCATG | + |
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Preference number: 5 (lower is better) Translates to: ISRAWNVLLSSWISL*LPCTGAGLATSWAM Trigger: CATGGCCCAGGAAGTGGCCAGTCCAGCGCCTGTACAGGGCAACCAAAGTGATATCCATGAGCTGAGGAGAACATTCCAGGCCCTAGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS TCA 90 bp | GGAGTAGTGTCCACCTTCACACTGACCTTGAAGTCACTCGGCAAGTaGTTCTCCTCCATTTCCTGCTCATGGCGTTTCTTCATGAGGATC | + |
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Preference number: 5 (lower is better) Translates to: GVVSTFTLTLKSLGK*FSSISCSWRFFMRI Trigger: GATCCTCATGAAGAAACGCCATGAGCAGGAAATGGAGGAGAATCACTTGCCGAGTGACTTCAAGGTCAGTGTGAAGGTGGACACTACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CAA 90 bp | AAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCATGGTGGCCTTGCCATaGCCACCTAGCAGGGGACTG | + |
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Preference number: 5 (lower is better) Translates to: KVSESENSKDFRRDSPISMVALP*PPSRGL Trigger: CAGTCCCCTGCTAGGTGGCAATGGCAAGGCCACCAT...GCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CAA 90 bp | TTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCGCGGACTGCCATCCTGGCGTaGTCAATGAGCACGACAATG | + |
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Preference number: 5 (lower is better) Translates to: FLNLKTPRISVETHPLARTAILA*SMSTTM Trigger: CATTGTCGTGCTCATTGACAACGCCAGGATGGCAGT...CCGCGCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CAA 90 bp | AAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCTTCTGCATGGTGGCCTaGCCATTGCCACCTAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: KVSESENSKDFRRDSPISFCMVA*PLPPSR Trigger: CCTGCTAGGTGGCAATGGCAAGGCCACCATGCAGAA...GCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CAA 90 bp | AAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCACGACAATGTGGGCATaGGCCATCTTACCGTCCACT | + |
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Preference number: 5 (lower is better) Translates to: KVSESENSKDFRRDSPISTTMWA*AILPST Trigger: AGTGGACGGTAAGATGGCCAATGCCCACATTGTCGT...GCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CAA 90 bp | CATTATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCTCATGGATATCACTTaGGTTGCCCTGTACAGGCGC | + |
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Preference number: 5 (lower is better) Translates to: HYREKFLNLKTPRISVETLMDIT*VALYRR Trigger: GCGCCTGTACAGGGCAACCAAAGTGATATCCATGAG...AGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CAA 90 bp | TATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCAGATCCTTTCAGCCTaGACTCAGATCCATCCATCG | + |
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Preference number: 5 (lower is better) Translates to: YREKFLNLKTPRISVETHQILSA*TQIHPS Trigger: CGATGGATGGATCTGAGTCAAGGCTGAAAGGATCTG...GTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CAA 90 bp | AAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCATTAGCTTTTCAAACTTCAGGTaGAAGTCATCCACTGCCATC | + |
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Preference number: 5 (lower is better) Translates to: KVSESENSKDFRRDSPISFSNFR*KSSTAI Trigger: GATGGCAGTGGATGACTTCAACCTGAAGTTTGAAAA...GCTAATGGGTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CAA 90 bp | CATTATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTTCCATTGACACTCTCTaGAGTGATGGCCTTGATCGT | + |
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Preference number: 5 (lower is better) Translates to: HYREKFLNLKTPRISVETSIDTL*SDGLDR Trigger: ACGATCAAGGCCATCACTCAAGAGAGTGTCAATGGA...AGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CAA 90 bp | TATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACTTGGATCTCATTCACTaGAGAAAGAACGATTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: YREKFLNLKTPRISVETHLDLIH*RKNDSS Trigger: GGAAGAATCGTTCTTTCTCAAGTGAATGAGATCCAA...GTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS-3UTR CAA 90 bp | TATAGAGAAAAGTTTCTGAATCTGAAAACTCCAAGGATTTCCGTCGAGACTCACCCAGGTGTCCAACTCTaGATGTTTCTTCTTTATTAT | + |
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Preference number: 5 (lower is better) Translates to: YREKFLNLKTPRISVETHPGVQL*MFLLYY Trigger: ATAATAAAGAAGAAACATCAAGAGTTGGACACCTGG...GTGAGTCTCGACGGAAATCCTTGGAGTTTTCAGATTCAGAAACTTTTCTCTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS CCA 72 bp | AAGGAAAGGGAGATGCGGACACCCCCTGCGCCTCCATaGACACTCGGTGCCCGATGGCAGCTCCCCTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: KEREMRTPPAPP*TLGARWQLPCR Trigger: GCGGCAGGGGAGCTGCCATCGGGCACCGAGTGTCCATGGAGGCGCAGGGGGTGTCCGCATCTCCCTTTCCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS CCA 72 bp | TGGTTGCCCTGTACAGGCGCTGGACTGGCCACTTCCTaGGCCATGGCGGCTGACTGCTCTCTGAACCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: WLPCTGAGLATS*AMAADCSLNQV Trigger: CACCTGGTTCAGAGAGCAGTCAGCCGCCATGGCCCAGGAAGTGGCCAGTCCAGCGCCTGTACAGGGCAACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS TCA 72 bp | AGGCGCTGGACTGGCCACTTCCTGGGCCATGGCGGCTaGCTGCTCTCTGAACCAGGTGTCCAACTCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: RRWTGHFLGHGG*LLSEPGVQLLM Trigger: CATCAAGAGTTGGACACCTGGTTCAGAGAGCAGTCAGCCGCCATGGCCCAGGAAGTGGCCAGTCCAGCGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS CAA 90 bp | TCTAGGGCCTGGAATGTTCTCCTCAGCTCATGGATATCACTTTGGTaGCCCTGTACAGGCGCTGGACTGGCCACTTCCTGGGCCATGGCG | + |
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Preference number: 6 (lower is better) Translates to: SRAWNVLLSSWISLW*PCTGAGLATSWAMA Trigger: CGCCATGGCCCAGGAAGTGGCCAGTCCAGCGCCTGTACAGGGCAACCAAAGTGATATCCATGAGCTGAGGAGAACATTCCAGGCCCTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS CAA 90 bp | TCCACTGCCATCCTGGCGTTGTCAATGAGCACGACAATGTGGGCATaGGCCATCTTACCGTCCACTATCTGCTCCTGCAGGCGGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: STAILALSMSTTMWA*AILPSTICSCRRLM Trigger: CATCAGCCGCCTGCAGGAGCAGATAGTGGACGGTAAGATGGCCAATGCCCACATTGTCGTGCTCATTGACAACGCCAGGATGGCAGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS TCA 72 bp | GGCGGAGCTGAATCAGCTCTTCTTCGTAGTGGGAGATaGTCTGCTGCATGTCCTGGAGACGGCAGGAGTATC | + |
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Preference number: 6 (lower is better) Translates to: GGAESALLRSGR*SAACPGDGRSI Trigger: GATACTCCTGCCGTCTCCAGGACATGCAGCAGATCATCTCCCACTACGAAGAAGAGCTGATTCAGCTCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS GCA 72 bp | GGAATGTTCTCCTCAGCTCATGGATATCACTTTGGTTaGCCTGTACAGGCGCTGGACTGGCCACTTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GMFSSAHGYHFG*PVQALDWPLPG Trigger: CCCAGGAAGTGGCCAGTCCAGCGCCTGTACAGGGCAACCAAAGTGATATCCATGAGCTGAGGAGAACATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS CCA 72 bp | GCCTGGAATGTTCTCCTCAGCTCATGGATATCACTTTaGTTGCCCTGTACAGGCGCTGGACTGGCCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: AWNVLLSSWISL*LPCTGAGLATS Trigger: GGAAGTGGCCAGTCCAGCGCCTGTACAGGGCAACCAAAGTGATATCCATGAGCTGAGGAGAACATTCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS CAA 72 bp | GGCCTGGAATGTTCTCCTCAGCTCATGGATATCACTTaGGTTGCCCTGTACAGGCGCTGGACTGGCCACTTC | + |
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Preference number: 6 (lower is better) Translates to: GLECSPQLMDIT*VALYRRWTGHF Trigger: GAAGTGGCCAGTCCAGCGCCTGTACAGGGCAACCAAAGTGATATCCATGAGCTGAGGAGAACATTCCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS CCA 72 bp | ACTGCCATCCTGGCGTTGTCAATGAGCACGACAATGTaGGCATTGGCCATCTTACCGTCCACTATCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: TAILALSMSTTM*ALAILPSTICS Trigger: GGAGCAGATAGTGGACGGTAAGATGGCCAATGCCCACATTGTCGTGCTCATTGACAACGCCAGGATGGCAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS CAA 72 bp | ATCCTGGCGTTGTCAATGAGCACGACAATGTGGGCATaGGCCATCTTACCGTCCACTATCTGCTCCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ILALSMSTTMWA*AILPSTICSCR Trigger: CCTGCAGGAGCAGATAGTGGACGGTAAGATGGCCAATGCCCACATTGTCGTGCTCATTGACAACGCCAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS CAA 72 bp | TGGAATGTTCTCCTCAGCTCATGGATATCACTTTGGTaGCCCTGTACAGGCGCTGGACTGGCCACTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: WNVLLSSWISLW*PCTGAGLATSW Trigger: CCAGGAAGTGGCCAGTCCAGCGCCTGTACAGGGCAACCAAAGTGATATCCATGAGCTGAGGAGAACATTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS GCA 72 bp | ACAATGTGGGCATTGGCCATCTTACCGTCCACTATCTaGTCCTGCAGGCGGCTGATGTTTTCCTCATACTGG | + |
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Preference number: 6 (lower is better) Translates to: TMWALAILPSTI*SCRRLMFSSYW Trigger: CCAGTATGAGGAAAACATCAGCCGCCTGCAGGAGCAGATAGTGGACGGTAAGATGGCCAATGCCCACATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS CAA 72 bp | AACTTCAGGTTGAAGTCATCCACTGCCATCCTGGCGTaGTCAATGAGCACGACAATGTGGGCATTGGCCATC | + |
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Preference number: 6 (lower is better) Translates to: NFRLKSSTAILA*SMSTTMWALAI Trigger: GATGGCCAATGCCCACATTGTCGTGCTCATTGACAACGCCAGGATGGCAGTGGATGACTTCAACCTGAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS CAA 90 bp | TCGTTTTCAAACTTCAGGTTGAAGTCATCCACTGCCATCCTGGCGTaGTCAATGAGCACGACAATGTGGGCATTGGCCATCTTACCGTCC | + |
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Preference number: 6 (lower is better) Translates to: SFSNFRLKSSTAILA*SMSTTMWALAILPS Trigger: GGACGGTAAGATGGCCAATGCCCACATTGTCGTGCTCATTGACAACGCCAGGATGGCAGTGGATGACTTCAACCTGAAGTTTGAAAACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS TCA 72 bp | CCATCTTACCGTCCACTATCTGCTCCTGCAGGCGGCTaGTGTTTTCCTCATACTGGGAATAATCCTTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: PSYRPLSAPAGG*CFPHTGNNPFC Trigger: ACAGAAAGGATTATTCCCAGTATGAGGAAAACATCAGCCGCCTGCAGGAGCAGATAGTGGACGGTAAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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| CDS CCA 72 bp | TGTTTTCCTCATACTGGGAATAATCCTTTCTGTGGCTaGGTTCTCTCTCCTGATGCCACCTTAGTATACGGG | + |
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Preference number: 6 (lower is better) Translates to: CFPHTGNNPFCG*VLSPDATLVYG Trigger: CCCGTATACTAAGGTGGCATCAGGAGAGAGAACCCAGCCACAGAAAGGATTATTCCCAGTATGAGGAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006969.8 |
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