Pregenerated sensors for KRT222 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035849Ensembl transcript IDs: ENSMUST00000038214.7, ENSMUST00000103132.10
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCTGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTaGTTTAAAAGGTTTGTACAGCTGGAGTGTGTGTATGTCCGGGTG | + |
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Preference number: 1 (lower is better) Translates to: SWVTVLVTGFTTISM*FKRFVQLECVYVRV Trigger: CACCCGGACATACACACACTCCAGCTGTACAAACCTTTTAAAGCACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR GCA 90 bp | CTTAGCTCAGATAGCAGTACTATGCTGTTAGCTCACAGAAATGACTaGAAGGACTATTTCTCTGAGTTCATAGACTCTTTCCTCTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: LSSDSSTMLLAHRND*KDYFSEFIDSFLSG Trigger: GCCTGAGAGGAAAGAGTCTATGAACTCAGAGAAATAGTCCTTGCAGTCATTTCTGTGAGCTAACAGCATAGTACTGCTATCTGAGCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR CAA 90 bp | ACTCTTTCCTCTCAGGCCCATAGCACACGCTACTCACACTTCATTTaGCAGATGGTGAGCAGCTGGGTAACTGTCCTGGTAACTGGATTC | + |
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Preference number: 2 (lower is better) Translates to: TLSSQAHSTRYSHFI*QMVSSWVTVLVTGF Trigger: GAATCCAGTTACCAGGACAGTTACCCAGCTGCTCACCATCTGCAAAATGAAGTGTGAGTAGCGTGTGCTATGGGCCTGAGAGGAAAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCTATGTGCTAGGTGAAGTTCTGCCACCTTGCGGTACCCCCAGCCTGAAACAAGGACTATTTCTCTaGGTTCATAGACTCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: ASYVLGEVLPPCGTPSLKQGLFL*VHRLFP Trigger: AGGAAAGAGTCTATGAACTCAGAGAAATAGTCCTTG...TTTCAGGCTGGGGGTACCGCAAGGTGGCAGAACTTCACCTAGCACATAGGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103132.10 |
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| 3UTR-3UTR TCA 90 bp | GTGAGCAGCTGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGCTACTTATGTGTTCTCTaGAGAGAGCCAGAGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: VSSWVTVLVTGFTTISMCYLCVL*REPEPT Trigger: TGTGGGCTCTGGCTCTCTTCAGAGAACACATAAGTA...GCACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCTGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR-3UTR TCA 90 bp | GTGAGCAGCTGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGCTTCCCAGGGTTCAAATaGTTGTCTCAAAAGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: VSSWVTVLVTGFTTISMCFPGFK*LSQKGK Trigger: CTTTCCCTTTTGAGACAATCATTTGAACCCTGGGAA...GCACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCTGCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR-3UTR CCA 90 bp | GGTGAGCAGCTGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGAAAATAACTTACACTTaGGACTGGGGGTCTGTATGG | + |
|
Preference number: 2 (lower is better) Translates to: GEQLGNCPGNWIHHNLNVKITYT*DWGSVW Trigger: CCATACAGACCCCCAGTCCCAAGTGTAAGTTATTTT...CACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCTGCTCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR-3UTR CCA 90 bp | CTGGATTCACCACAATCTCAATGTGCTTTAAAAGGTTTGTACAGCTGGAGTGTGACTTACACTTGGGACTaGGGGTCTGTATGGCCTACA | + |
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Preference number: 2 (lower is better) Translates to: LDSPQSQCALKGLYSWSVTYTWD*GSVWPT Trigger: TGTAGGCCATACAGACCCCCAGTCCCAAGTGTAAGT...CACACTCCAGCTGTACAAACCTTTTAAAGCACATTGAGATTGTGGTGAATCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGCTTTAAAACTTACACTTGGGACTaGGGGTCTGTATGGCCTACA | + |
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Preference number: 2 (lower is better) Translates to: SWVTVLVTGFTTISMCFKTYTWD*GSVWPT Trigger: TGTAGGCCATACAGACCCCCAGTCCCAAGTGTAAGT...TTTAAAGCACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR-3UTR TCA 90 bp | GGTGTGTGTGTGTGTGTGTGTGTACAACCTTTAACTTTCAACAAACTAACTCTCAGGGAAAGTCCTAAGTaGATACTGAGTCTGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: GVCVCVCVQPLTFNKLTLRESPK*ILSLLL Trigger: AAGGAGCAGACTCAGTATTCACTTAGGACTTTCCCT...GAGAGTTAGTTTGTTGAAAGTTAAAGGTTGTACACACACACACACACACACACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR-3UTR TCA 90 bp | TGGATGGAACACTTCGTCATTCCCAGGGTTCAAATGATTGTCTCAAAAGGGAAATCCACACTGGATTTCTaGTTTATTTTTAAGCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: WMEHFVIPRVQMIVSKGKSTLDF*FIFKQP Trigger: GGGCTGCTTAAAAATAAATCAGAAATCCAGTGTGGA...TTTCCCTTTTGAGACAATCATTTGAACCCTGGGAATGACGAAGTGTTCCATCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR-3UTR TCA 90 bp | AATTTAAAATCAAGTTCTGCAGGCACTCTTAGCTCAGATAGCAGTACTATGCTGAGGGAAAGTCCTAAGTaGATACTGAGTCTGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: NLKSSSAGTLSSDSSTMLRESPK*ILSLLL Trigger: AAGGAGCAGACTCAGTATTCACTTAGGACTTTCCCT...CAGCATAGTACTGCTATCTGAGCTAAGAGTGCCTGCAGAACTTGATTTTAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGCTTTAAACAGTTTGTTCCTAACTaGTGCCTTTTTAGAAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: SWVTVLVTGFTTISMCFKQFVPN*CLFRSG Trigger: TCCACTTCTAAAAAGGCAGCAGTTAGGAACAAACTG...TTTAAAGCACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR-3UTR CCA 90 bp | GGTGTGTGTGTGTGTGTGTGTGTACAACCTTTAACTTTCAACAAACTAACTCTCAAAATAACTTACACTTaGGACTGGGGGTCTGTATGG | + |
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Preference number: 2 (lower is better) Translates to: GVCVCVCVQPLTFNKLTLKITYT*DWGSVW Trigger: CCATACAGACCCCCAGTCCCAAGTGTAAGTTATTTT...GAGAGTTAGTTTGTTGAAAGTTAAAGGTTGTACACACACACACACACACACACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR-3UTR GCA 90 bp | ATACTGAGTCTGCTCCTTAAACAGTTTGTTCCTAACTGCTGCCTTTTTAGAAGTCTTTGGAGTCCTAGCTaGAGCATCTCTTACTTATGT | + |
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Preference number: 2 (lower is better) Translates to: ILSLLLKQFVPNCCLFRSLWSPS*SISYLC Trigger: ACATAAGTAAGAGATGCTGCAGCTAGGACTCCAAAG...ACTTCTAAAAAGGCAGCAGTTAGGAACAAACTGTTTAAGGAGCAGACTCAGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCCTTGTGGCTAAAGCATATTTACTAGTCAACATATATACACACATGTGGCTTTGGAGTCCTAGCTaGAGCATCTCTTACTTATGT | + |
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Preference number: 2 (lower is better) Translates to: KFLVAKAYLLVNIYTHMWLWSPS*SISYLC Trigger: ACATAAGTAAGAGATGCTGCAGCTAGGACTCCAAAG...CCACATGTGTGTATATATGTTGACTAGTAAATATGCTTTAGCCACAAGGAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103132.10 |
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| 3UTR TCA 72 bp | CCTGAGGTCCAGACCCAGTGCCTCCTATGTGCTAGGTaGAGTTCTGCCACCTTGCGGTACCCCCAGCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: PEVQTQCLLCAR*SSATLRYPQPE Trigger: TTCAGGCTGGGGGTACCGCAAGGTGGCAGAACTTCACCTAGCACATAGGAGGCACTGGGTCTGGACCTCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103132.10 |
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| 3UTR TCA 72 bp | CCCAGTAACCACATGGTGGCTCACAACCATCTGTCATaGGATCTGATGCCCTCCTTCTGGGGTGCAAGCATA | + |
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Preference number: 3 (lower is better) Translates to: PSNHMVAHNHLS*DLMPSFWGASI Trigger: TATGCTTGCACCCCAGAAGGAGGGCATCAGATCTCATGACAGATGGTTGTGAGCCACCATGTGGTTACTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103132.10 |
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| 3UTR-3UTR CAA 90 bp | GCCTCCTATGTGCTAGGTGAAGTTCTGCCACCTTGCGGTACCCCCAGCCTGAAATATGCTGTTGTAACATaGAAGAACAGCATCGTTCAT | + |
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Preference number: 3 (lower is better) Translates to: ASYVLGEVLPPCGTPSLKYAVVT*KNSIVH Trigger: ATGAACGATGCTGTTCTTCAATGTTACAACAGCATA...TTTCAGGCTGGGGGTACCGCAAGGTGGCAGAACTTCACCTAGCACATAGGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103132.10 |
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| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCTGTCATGAGATCTaGTGCCCTCCTTCTGGGGTGCAAGCATATATGTAT | + |
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Preference number: 3 (lower is better) Translates to: TTWWLTTICHEI*CPPSGVQAYMY Trigger: ATACATATATGCTTGCACCCCAGAAGGAGGGCATCAGATCTCATGACAGATGGTTGTGAGCCACCATGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103132.10 |
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| 3UTR CCA 72 bp | CGCTACTCACACTTCATTTTGCAGATGGTGAGCAGCTaGGTAACTGTCCTGGTAACTGGATTCACCACAATC | + |
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Preference number: 3 (lower is better) Translates to: RYSHFILQMVSS*VTVLVTGFTTI Trigger: GATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCTGCTCACCATCTGCAAAATGAAGTGTGAGTAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR CCA 72 bp | CCACAATCTCAATGTGCTTTAAAAGGTTTGTACAGCTaGAGTGTGTGTATGTCCGGGTGTGTGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: PQSQCALKGLYS*SVCMSGCVCVC Trigger: ACACACACACACACACCCGGACATACACACACTCCAGCTGTACAAACCTTTTAAAGCACATTGAGATTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR-3UTR CAA 90 bp | TGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGCTTTAAAAGGTGCTCCTTAAACAGTTaGTTCCTAACTGCTGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: WVTVLVTGFTTISMCFKRCSLNS*FLTAAF Trigger: AAAGGCAGCAGTTAGGAACAAACTGTTTAAGGAGCA...CCTTTTAAAGCACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR-3UTR CAA 90 bp | CTGGATTCACCACAATCTCAATGTGCTTTAAAAGGTTTGTACAGCTGGAGTGTGTGCTCCTTAAACAGTTaGTTCCTAACTGCTGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: LDSPQSQCALKGLYSWSVCSLNS*FLTAAF Trigger: AAAGGCAGCAGTTAGGAACAAACTGTTTAAGGAGCA...CACACTCCAGCTGTACAAACCTTTTAAAGCACATTGAGATTGTGGTGAATCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR GCA 72 bp | ACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTaGTTTAAAAGGTTTGTACAGCTGGAGTGTGTGTAT | + |
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Preference number: 3 (lower is better) Translates to: TVLVTGFTTISM*FKRFVQLECVY Trigger: ATACACACACTCCAGCTGTACAAACCTTTTAAAGCACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR GCA 72 bp | GATAGCAGTACTATGCTGTTAGCTCACAGAAATGACTaGAAGGACTATTTCTCTGAGTTCATAGACTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: DSSTMLLAHRND*KDYFSEFIDSF Trigger: GAAAGAGTCTATGAACTCAGAGAAATAGTCCTTGCAGTCATTTCTGTGAGCTAACAGCATAGTACTGCTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR GCA 72 bp | CCCAATTTTATTAATAATCAAAATTGCCTTGGAGAGTaGTCTACAGTCCATTCAGAATCGCTCATGGATGGA | + |
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Preference number: 3 (lower is better) Translates to: PNFINNQNCLGE*STVHSESLMDG Trigger: TCCATCCATGAGCGATTCTGAATGGACTGTAGAGCACTCTCCAAGGCAATTTTGATTATTAATAAAATTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR CCA 72 bp | ATGATACTTGAGCTGAGAACAAAGAACAGTGGCCAATaGTTTGTACTCCTTATTTGTTGTTGTTTAGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: MILELRTKNSGQ*FVLLICCCLGK Trigger: TTTTCCTAAACAACAACAAATAAGGAGTACAAACCATTGGCCACTGTTCTTTGTTCTCAGCTCAAGTATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103132.10 |
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| CDS-3UTR CCA 90 bp | GTGAGCAGCTGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGCTCCACTTGCAGGTGGTaGCACTGCCGGCGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VSSWVTVLVTGFTTISMCSTCRW*HCRRAS Trigger: GGAGGCCCGCCGGCAGTGCCACCACCTGCAAGTGGA...GCACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCTGCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| CDS-3UTR TCA 90 bp | TGGATGGAACACTTCGTCATTCCCAGGGTTCAAATGATTGTCTCAAAAGGGAAAGCCGGCGGGCCTCCTTaGGTTCAGCCTGAGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: WMEHFVIPRVQMIVSKGKAGGPP*VQPELP Trigger: AGGCAGCTCAGGCTGAACTCAAGGAGGCCCGCCGGC...TTTCCCTTTTGAGACAATCATTTGAACCCTGGGAATGACGAAGTGTTCCATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| CDS-3UTR TCA 90 bp | GGTGAGCAGCTGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGTCCTTGAGTTCAGCCTaGGCTGCCTTCAGAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GEQLGNCPGNWIHHNLNVSLSSA*AAFRAS Trigger: GGAAGCTCTGAAGGCAGCTCAGGCTGAACTCAAGGA...CACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCTGCTCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| CDS-3UTR GCA 90 bp | AGCTGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGCTTTAAATGCAGGTGGTGGCACTaGCGGCGGGCCTCCTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: SWVTVLVTGFTTISMCFKCRWWH*RRASLS Trigger: ACTCAAGGAGGCCCGCCGGCAGTGCCACCACCTGCA...TTTAAAGCACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| CDS-3UTR CCA 90 bp | CTTACTTATGTGTTCTCTGAAGAGAGCCAGAGCCCACAGCATCTTAACACTATCATTTCCACTTGCAGGTaGTGGCACTGCCGGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LTYVFSEESQSPQHLNTIISTCR*WHCRRA Trigger: GGCCCGCCGGCAGTGCCACCACCTGCAAGTGGAAAT...GATAGTGTTAAGATGCTGTGGGCTCTGGCTCTCTTCAGAGAACACATAAGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| CDS-3UTR TCA 90 bp | ACACTTCATTTTGCAGATGGTGAGCAGCTGGGTAACTGTCCTGGTAACTGGATTTCCACTTTCTCTGTCTaGATGGTGCCGTGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TLHFADGEQLGNCPGNWISTFSV*MVPWAS Trigger: GGAGGCCCACGGCACCATTCAGACAGAGAAAGTGGA...AATCCAGTTACCAGGACAGTTACCCAGCTGCTCACCATCTGCAAAATGAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| CDS-3UTR CCA 90 bp | ATCTATCCATGTAAAATAACTTACACTTGGGACTGGGGGTCTGTATGGCCTACAATTTCCACTTGCAGGTaGTGGCACTGCCGGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: IYPCKITYTWDWGSVWPTISTCR*WHCRRA Trigger: GGCCCGCCGGCAGTGCCACCACCTGCAAGTGGAAAT...TGTAGGCCATACAGACCCCCAGTCCCAAGTGTAAGTTATTTTACATGGATAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| 3UTR CAA 72 bp | TCTCAGGCCCATAGCACACGCTACTCACACTTCATTTaGCAGATGGTGAGCAGCTGGGTAACTGTCCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: SQAHSTRYSHFI*QMVSSWVTVLV Trigger: TACCAGGACAGTTACCCAGCTGCTCACCATCTGCAAAATGAAGTGTGAGTAGCGTGTGCTATGGGCCTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| CDS-3UTR GCA 90 bp | GTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGCTTTAAAAGGTTTTGCAGGTGGTGGCACTaGCGGCGGGCCTCCTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: VTVLVTGFTTISMCFKRFCRWWH*RRASLS Trigger: ACTCAAGGAGGCCCGCCGGCAGTGCCACCACCTGCA...AAACCTTTTAAAGCACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| CDS-3UTR GCA 90 bp | GTGAGCAGCTGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGCTACGTGGCTATTTCCTaGTCCAGCCTCATCTTCGTG | + |
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Preference number: 4 (lower is better) Translates to: VSSWVTVLVTGFTTISMCYVAIS*SSLIFV Trigger: CACGAAGATGAGGCTGGAGCAGGAAATAGCCACGTA...GCACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCTGCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| CDS-3UTR TCA 90 bp | AAGTTCCTTGTGGCTAAAGCATATTTACTAGTCAACATATATACACACATGTGGGCCGGCGGGCCTCCTTaGGTTCAGCCTGAGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: KFLVAKAYLLVNIYTHMWAGGPP*VQPELP Trigger: AGGCAGCTCAGGCTGAACTCAAGGAGGCCCGCCGGC...CCACATGTGTGTATATATGTTGACTAGTAAATATGCTTTAGCCACAAGGAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103132.10 |
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| CDS-3UTR TCA 90 bp | ATCTATCCATGTAAAATAACTTACACTTGGGACTGGGGGTCTGTATGGCCTACATCCACTTTCTCTGTCTaGATGGTGCCGTGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: IYPCKITYTWDWGSVWPTSTFSV*MVPWAS Trigger: GGAGGCCCACGGCACCATTCAGACAGAGAAAGTGGA...TGTAGGCCATACAGACCCCCAGTCCCAAGTGTAAGTTATTTTACATGGATAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| CDS-3UTR GCA 90 bp | TGGATGGAACACTTCGTCATTCCCAGGGTTCAAATGATTGTCTCAAAAGGGAAAGACTCGATTTCCACTTaGAGGTGGTGGCACTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: WMEHFVIPRVQMIVSKGKDSIST*RWWHCR Trigger: CCGGCAGTGCCACCACCTGCAAGTGGAAATCGAGTC...TTTCCCTTTTGAGACAATCATTTGAACCCTGGGAATGACGAAGTGTTCCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| CDS-3UTR GCA 90 bp | CCGGGTGTGTGTGTGTGTGTGTGTGTACAACCTTTAACTTTCAACAAACTAACTGACTCGATTTCCACTTaGAGGTGGTGGCACTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: PGVCVCVCVQPLTFNKLTDSIST*RWWHCR Trigger: CCGGCAGTGCCACCACCTGCAAGTGGAAATCGAGTC...AGTTAGTTTGTTGAAAGTTAAAGGTTGTACACACACACACACACACACACCCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| CDS-3UTR CCA 90 bp | AAGTTCCTTGTGGCTAAAGCATATTTACTAGTCAACATATATACACACATGTGGTCCACTTGCAGGTGGTaGCACTGCCGGCGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: KFLVAKAYLLVNIYTHMWSTCRW*HCRRAS Trigger: GGAGGCCCGCCGGCAGTGCCACCACCTGCAAGTGGA...CCACATGTGTGTATATATGTTGACTAGTAAATATGCTTTAGCCACAAGGAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103132.10 |
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| CDS-3UTR CCA 90 bp | GATGGTGAGCAGCTGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGATAATGCTGCTCACTaGCCTGCAGGGAGTTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: DGEQLGNCPGNWIHHNLNDNAAH*PAGSSQ Trigger: TTGAGAACTCCCTGCAGGCCAGTGAGCAGCATTATC...ATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCTGCTCACCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| CDS-3UTR CCA 90 bp | GGTGAGCAGCTGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGTTAGTTGGTTCCTGGTaGGGGTTTGATGGAGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: GEQLGNCPGNWIHHNLNVLVGSW*GFDGGN Trigger: ATTCCCTCCATCAAACCCCCACCAGGAACCAACTAA...CACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCTGCTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
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| CDS-3UTR TCA 90 bp | CCGGGTGTGTGTGTGTGTGTGTGTGTACAACCTTTAACTTTCAACAAACTAACTTTCCTGGTGGGGGTTTaGTGGAGGGAATACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGVCVCVCVQPLTFNKLTFLVGV*WREYCR Trigger: CCTGCAGTATTCCCTCCATCAAACCCCCACCAGGAA...AGTTAGTTTGTTGAAAGTTAAAGGTTGTACACACACACACACACACACACCCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR TCA 90 bp | GATGGTGAGCAGCTGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATAACACCGTCTCTATCTaGTTTCTGGTGAGGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DGEQLGNCPGNWIHHNLNNTVSI*FLVRSC Trigger: ACAGCTCCTCACCAGAAATCAGATAGAGACGGTGTT...ATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCTGCTCACCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103132.10 |
||
| CDS-3UTR GCA 90 bp | CTTATGTGTTCTCTGAAGAGAGCCAGAGCCCACAGCATCTTAACACTATCTATCTTGAGAAGCATCTCGTaGTCTCGAAGCTGCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LMCSLKRARAHSILTLSILRSIS*SRSCLS Trigger: CGAGAGGCAGCTTCGAGAGCACGAGATGCTTCTCAA...GATAGATAGTGTTAAGATGCTGTGGGCTCTGGCTCTCTTCAGAGAACACATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR GCA 90 bp | ACACTTCATTTTGCAGATGGTGAGCAGCTGGGTAACTGTCCTGGTAACTGGATTTACGTGGCTATTTCCTaGTCCAGCCTCATCTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLHFADGEQLGNCPGNWIYVAIS*SSLIFV Trigger: CACGAAGATGAGGCTGGAGCAGGAAATAGCCACGTA...AATCCAGTTACCAGGACAGTTACCCAGCTGCTCACCATCTGCAAAATGAAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR TCA 90 bp | TGGATGGAACACTTCGTCATTCCCAGGGTTCAAATGATTGTCTCAAAAGGGAAAGCCTCATCTTCGTGTTaGGAAGCATCTCGTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WMEHFVIPRVQMIVSKGKASSSC*EASRAL Trigger: GAGAGCACGAGATGCTTCTCAACACGAAGATGAGGC...TTTCCCTTTTGAGACAATCATTTGAACCCTGGGAATGACGAAGTGTTCCATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR GCA 90 bp | ACACTTCATTTTGCAGATGGTGAGCAGCTGGGTAACTGTCCTGGTAACTGGATTGTCTCTGTTCACTACTaGCTGTTTGGTCACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLHFADGEQLGNCPGNWIVSVHY*LFGHCL Trigger: GAGACAGTGACCAAACAGGCAGTAGTGAACAGAGAC...AATCCAGTTACCAGGACAGTTACCCAGCTGCTCACCATCTGCAAAATGAAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGCTTTAAACCCCTTTCCACAGCGTaGAGAGACTCGATTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SWVTVLVTGFTTISMCFKPLSTA*RDSIST Trigger: AGTGGAAATCGAGTCTCTCCACGCTGTGGAAAGGGG...TTTAAAGCACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR TCA 90 bp | AATTTAAAATCAAGTTCTGCAGGCACTCTTAGCTCAGATAGCAGTACTATGCTGTTCCTGGTGGGGGTTTaGTGGAGGGAATACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLKSSSAGTLSSDSSTMLFLVGV*WREYCR Trigger: CCTGCAGTATTCCCTCCATCAAACCCCCACCAGGAA...CAGCATAGTACTGCTATCTGAGCTAAGAGTGCCTGCAGAACTTGATTTTAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR CCA 90 bp | TGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGCTTTAAAAGGGATAATGCTGCTCACTaGCCTGCAGGGAGTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WVTVLVTGFTTISMCFKRDNAAH*PAGSSQ Trigger: TTGAGAACTCCCTGCAGGCCAGTGAGCAGCATTATC...CCTTTTAAAGCACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR TCA 90 bp | ACACTTCATTTTGCAGATGGTGAGCAGCTGGGTAACTGTCCTGGTAACTGGATTTTCATTTATAATGGCTaGGGGGAGAAGAAAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLHFADGEQLGNCPGNWIFIYNG*GEKKAN Trigger: GTTGGCTTTCTTCTCCCCTCAGCCATTATAAATGAA...AATCCAGTTACCAGGACAGTTACCCAGCTGCTCACCATCTGCAAAATGAAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR TCA 90 bp | AAGTTCCTTGTGGCTAAAGCATATTTACTAGTCAACATATATACACACATGTGGTCCTTGAGTTCAGCCTaGGCTGCCTTCAGAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KFLVAKAYLLVNIYTHMWSLSSA*AAFRAS Trigger: GGAAGCTCTGAAGGCAGCTCAGGCTGAACTCAAGGA...CCACATGTGTGTATATATGTTGACTAGTAAATATGCTTTAGCCACAAGGAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103132.10 |
||
| CDS-3UTR GCA 90 bp | GGTGTGTGTGTGTGTGTGTGTGTACAACCTTTAACTTTCAACAAACTAACTCTCGTCTCTGTTCACTACTaGCTGTTTGGTCACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVCVCVCVQPLTFNKLTLVSVHY*LFGHCL Trigger: GAGACAGTGACCAAACAGGCAGTAGTGAACAGAGAC...GAGAGTTAGTTTGTTGAAAGTTAAAGGTTGTACACACACACACACACACACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR GCA 90 bp | AGCTGGGTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGCTTTAAAGAGCTGTTCATAGTTTaGCCTGATCTCATTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SWVTVLVTGFTTISMCFKELFIV*PDLIEE Trigger: CTCCTCAATGAGATCAGGGCAAACTATGAACAGCTC...TTTAAAGCACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTACCCAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103132.10 |
||
| CDS-3UTR CCA 90 bp | CTGTTAGCTCACAGAAATGACTGCAAGGACTATTTCTCTGAGTTCATAGACTCTTTAGTTGGTTCCTGGTaGGGGTTTGATGGAGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLAHRNDCKDYFSEFIDSLVGSW*GFDGGN Trigger: ATTCCCTCCATCAAACCCCCACCAGGAACCAACTAA...AGAGTCTATGAACTCAGAGAAATAGTCCTTGCAGTCATTTCTGTGAGCTAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR TCA 90 bp | GTAACTGTCCTGGTAACTGGATTCACCACAATCTCAATGTGCTTTAAAAGGTTTTTCATTTATAATGGCTaGGGGGAGAAGAAAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VTVLVTGFTTISMCFKRFFIYNG*GEKKAN Trigger: GTTGGCTTTCTTCTCCCCTCAGCCATTATAAATGAA...AAACCTTTTAAAGCACATTGAGATTGTGGTGAATCCAGTTACCAGGACAGTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR CCA 90 bp | ATCTATCCATGTAAAATAACTTACACTTGGGACTGGGGGTCTGTATGGCCTACATCTGACTTCGATATCTaGCAGATTATCTTGTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: IYPCKITYTWDWGSVWPTSDFDI*QIILST Trigger: AGTAGACAAGATAATCTGCCAGATATCGAAGTCAGA...TGTAGGCCATACAGACCCCCAGTCCCAAGTGTAAGTTATTTTACATGGATAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR CCA 90 bp | AATTTAAAATCAAGTTCTGCAGGCACTCTTAGCTCAGATAGCAGTACTATGCTGTCACTACTGCCTGTTTaGTCACTGTCTCCATATTTT | + |
|
Preference number: 4 (lower is better) Translates to: NLKSSSAGTLSSDSSTMLSLLPV*SLSPYF Trigger: AAAATATGGAGACAGTGACCAAACAGGCAGTAGTGA...CAGCATAGTACTGCTATCTGAGCTAAGAGTGCCTGCAGAACTTGATTTTAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR CCA 90 bp | GGTGTGTGTGTGTGTGTGTGTGTACAACCTTTAACTTTCAACAAACTAACTCTCTCTGACTTCGATATCTaGCAGATTATCTTGTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: GVCVCVCVQPLTFNKLTLSDFDI*QIILST Trigger: AGTAGACAAGATAATCTGCCAGATATCGAAGTCAGA...GAGAGTTAGTTTGTTGAAAGTTAAAGGTTGTACACACACACACACACACACACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS GCA 90 bp | TCCAGCCTCATCTTCGTGTTGAGAAGCATCTCGTGCTCTCGAAGCTaGCTCTCGATGCCACGCCTCACTTCCTGCAGCTCCCTCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSLIFVLRSISCSRS*LSMPRLTSCSSLSS Trigger: ACTGGAGAGGGAGCTGCAGGAAGTGAGGCGTGGCATCGAGAGGCAGCTTCGAGAGCACGAGATGCTTCTCAACACGAAGATGAGGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS GCA 90 bp | GCCTCTCGATGCCACGCCTCACTTCCTGCAGCTCCCTCTCCAGTCTaGCAATCACTGACTCCAGATCTTGCAGCTGCATCTGATAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASRCHASLPAAPSPV*QSLTPDLAAASDNA Trigger: AGCATTATCAGATGCAGCTGCAAGATCTGGAGTCAGTGATTGGCAGACTGGAGAGGGAGCTGCAGGAAGTGAGGCGTGGCATCGAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS CCA 90 bp | TCACTGACTCCAGATCTTGCAGCTGCATCTGATAATGCTGCTCACTaGCCTGCAGGGAGTTCTCAAGGCCCCTTTCCACAGCGTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLTPDLAAASDNAAH*PAGSSQGPFPQRGE Trigger: CTCTCCACGCTGTGGAAAGGGGCCTTGAGAACTCCCTGCAGGCCAGTGAGCAGCATTATCAGATGCAGCTGCAAGATCTGGAGTCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS CCA 90 bp | TTATCTTGTCTACTCTCTAAACAGCCCTCATCCGTGGCTGCTAGATaGAGATCAAACCGGAGAGAGACGGACTTTTTCCTCAGTCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSCLLSKQPSSVAAR*RSNRRETDFFLSRG Trigger: CCCTCGACTGAGGAAAAAGTCCGTCTCTCTCCGGTTTGATCTCCATCTAGCAGCCACGGATGAGGGCTGTTTAGAGAGTAGACAAGATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR CAA 90 bp | ACACGCTACTCACACTTCATTTTGCAGATGGTGAGCAGCTGGGTAACTGTCCTGAGCCTCATCTTCGTGTaGAGAAGCATCTCGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TRYSHFILQMVSSWVTVLSLIFV*RSISCS Trigger: AGAGCACGAGATGCTTCTCAACACGAAGATGAGGCT...CAGGACAGTTACCCAGCTGCTCACCATCTGCAAAATGAAGTGTGAGTAGCGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR CAA 90 bp | AAACCCCTGCTCATCTTTGGAGTCCTAGCTGCAGCATCTCTTACTTATGTGTTCGTTCCTGGTGGGGGTTaGATGGAGGGAATACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KPLLIFGVLAAASLTYVFVPGGG*MEGILQ Trigger: CTGCAGTATTCCCTCCATCAAACCCCCACCAGGAAC...GAACACATAAGTAAGAGATGCTGCAGCTAGGACTCCAAAGATGAGCAGGGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS TCA 90 bp | AATGAACCTTCCCATTCTTTTATAACTTCATCCACTTTCTCTGTCTaGATGGTGCCGTGGGCCTCCGCGCTCTCCTTCACGTCTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NEPSHSFITSSTFSV*MVPWASALSFTSLF Trigger: GAACAGAGACGTGAAGGAGAGCGCGGAGGCCCACGGCACCATTCAGACAGAGAAAGTGGATGAAGTTATAAAAGAATGGGAAGGTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR CAA 90 bp | TGGATGGAACACTTCGTCATTCCCAGGGTTCAAATGATTGTCTCAAAAGGGAAATTTGCCCTGATCTCATaGAGGAGCTGGGACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WMEHFVIPRVQMIVSKGKFALIS*RSWDSS Trigger: GGAGCTGTCCCAGCTCCTCAATGAGATCAGGGCAAA...TTTCCCTTTTGAGACAATCATTTGAACCCTGGGAATGACGAAGTGTTCCATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103132.10 |
||
| CDS-3UTR CAA 90 bp | GGTGTGTGTGTGTGTGTGTGTGTACAACCTTTAACTTTCAACAAACTAACTCTCAGCCTCATCTTCGTGTaGAGAAGCATCTCGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GVCVCVCVQPLTFNKLTLSLIFV*RSISCS Trigger: AGAGCACGAGATGCTTCTCAACACGAAGATGAGGCT...GAGAGTTAGTTTGTTGAAAGTTAAAGGTTGTACACACACACACACACACACACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR CAA 90 bp | AAACCCCTGCTCATCTTTGGAGTCCTAGCTGCAGCATCTCTTACTTATGTGTTCAAGCCAACTTTACTCTaGGTAGGCTTTTCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KPLLIFGVLAAASLTYVFKPTLL*VGFSSF Trigger: AAAAGAAGAAAAGCCTACCAAGAGTAAAGTTGGCTT...GAACACATAAGTAAGAGATGCTGCAGCTAGGACTCCAAAGATGAGCAGGGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS TCA 90 bp | GAGAGAGACGGACTTTTTCCTCAGTCGAGGGTTATCTTTAAAGAATaGACCTTCCCATTCTTTTATAACTTCATCCACTTTCTCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ERDGLFPQSRVIFKE*TFPFFYNFIHFLCL Trigger: CAGACAGAGAAAGTGGATGAAGTTATAAAAGAATGGGAAGGTTCATTCTTTAAAGATAACCCTCGACTGAGGAAAAAGTCCGTCTCTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS-3UTR CAA 90 bp | AATTTAAAATCAAGTTCTGCAGGCACTCTTAGCTCAGATAGCAGTACTATGCTGAAGCCAACTTTACTCTaGGTAGGCTTTTCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NLKSSSAGTLSSDSSTMLKPTLL*VGFSSF Trigger: AAAAGAAGAAAAGCCTACCAAGAGTAAAGTTGGCTT...CAGCATAGTACTGCTATCTGAGCTAAGAGTGCCTGCAGAACTTGATTTTAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS CAA 72 bp | GCCCCTTTCCACAGCGTGGAGAGACTCGATTTCCACTaGCAGGTGGTGGCACTGCCGGCGGGCCTCCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: APFHSVERLDFH*QVVALPAGLLE Trigger: CTCAAGGAGGCCCGCCGGCAGTGCCACCACCTGCAAGTGGAAATCGAGTCTCTCCACGCTGTGGAAAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS GCA 72 bp | CCCCTTTCCACAGCGTGGAGAGACTCGATTTCCACTTaGAGGTGGTGGCACTGCCGGCGGGCCTCCTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PLSTAWRDSIST*RWWHCRRASLS Trigger: ACTCAAGGAGGCCCGCCGGCAGTGCCACCACCTGCAAGTGGAAATCGAGTCTCTCCACGCTGTGGAAAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS CCA 72 bp | TCCACAGCGTGGAGAGACTCGATTTCCACTTGCAGGTaGTGGCACTGCCGGCGGGCCTCCTTGAGTTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: STAWRDSISTCR*WHCRRASLSSA Trigger: GGCTGAACTCAAGGAGGCCCGCCGGCAGTGCCACCACCTGCAAGTGGAAATCGAGTCTCTCCACGCTGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS CAA 90 bp | GTTCTCAAGGCCCCTTTCCACAGCGTGGAGAGACTCGATTTCCACTaGCAGGTGGTGGCACTGCCGGCGGGCCTCCTTGAGTTCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLKAPFHSVERLDFH*QVVALPAGLLEFSL Trigger: CAGGCTGAACTCAAGGAGGCCCGCCGGCAGTGCCACCACCTGCAAGTGGAAATCGAGTCTCTCCACGCTGTGGAAAGGGGCCTTGAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS TCA 72 bp | TGGTGGCACTGCCGGCGGGCCTCCTTGAGTTCAGCCTaGGCTGCCTTCAGAGCTTCCCCATCCTTGTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: WWHCRRASLSSA*AAFRASPSLSI Trigger: AATGGACAAGGATGGGGAAGCTCTGAAGGCAGCTCAGGCTGAACTCAAGGAGGCCCGCCGGCAGTGCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103132.10 |
||
| CDS GCA 72 bp | ATCTTCGTGTTGAGAAGCATCTCGTGCTCTCGAAGCTaGCTCTCGATGCCACGCCTCACTTCCTGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: IFVLRSISCSRS*LSMPRLTSCSS Trigger: GGAGCTGCAGGAAGTGAGGCGTGGCATCGAGAGGCAGCTTCGAGAGCACGAGATGCTTCTCAACACGAAGAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS GCA 72 bp | TGCTCCAGCCTCATCTTCGTGTTGAGAAGCATCTCGTaGTCTCGAAGCTGCCTCTCGATGCCACGCCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: CSSLIFVLRSIS*SRSCLSMPRLT Trigger: AGTGAGGCGTGGCATCGAGAGGCAGCTTCGAGAGCACGAGATGCTTCTCAACACGAAGATGAGGCTGGAGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS CCA 72 bp | CCAGATCTTGCAGCTGCATCTGATAATGCTGCTCACTaGCCTGCAGGGAGTTCTCAAGGCCCCTTTCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: PDLAAASDNAAH*PAGSSQGPFPQ Trigger: CTGTGGAAAGGGGCCTTGAGAACTCCCTGCAGGCCAGTGAGCAGCATTATCAGATGCAGCTGCAAGATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS CCA 72 bp | CTACTCTCTAAACAGCCCTCATCCGTGGCTGCTAGATaGAGATCAAACCGGAGAGAGACGGACTTTTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLSKQPSSVAAR*RSNRRETDFFL Trigger: GAGGAAAAAGTCCGTCTCTCTCCGGTTTGATCTCCATCTAGCAGCCACGGATGAGGGCTGTTTAGAGAGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||
| CDS GCA 72 bp | CTCTATCTGATTTCTGGTGAGGAGCTGTTCATAGTTTaGCCTGATCTCATTGAGGAGCTGGGACAGCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LYLISGEELFIV*PDLIEELGQLH Trigger: ATGGAGCTGTCCCAGCTCCTCAATGAGATCAGGGCAAACTATGAACAGCTCCTCACCAGAAATCAGATAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103132.10 |
||
| CDS TCA 72 bp | GGACTTTTTCCTCAGTCGAGGGTTATCTTTAAAGAATaGACCTTCCCATTCTTTTATAACTTCATCCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: GLFPQSRVIFKE*TFPFFYNFIHF Trigger: AAAGTGGATGAAGTTATAAAAGAATGGGAAGGTTCATTCTTTAAAGATAACCCTCGACTGAGGAAAAAGTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038214.7 ENSMUST00000103132.10 |
||