Pregenerated sensors for KRT20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035775Ensembl transcript IDs: ENSMUST00000017743.3
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCAATGCTTTACTCTACCTGAACTGGTCTGTGATGGATGTGCCTTaGAATGAGGACGATTGTGCTGGGTTTAATCTTGCCCTTTACAGC | + |
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Preference number: 1 (lower is better) Translates to: SNALLYLNWSVMDVP*NEDDCAGFNLALYS Trigger: GCTGTAAAGGGCAAGATTAAACCCAGCACAATCGTCCTCATTGCAAGGCACATCCATCACAGACCAGTTCAGGTAGAGTAAAGCATTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR GCA 90 bp | CCCAAAGGAGAGCGGTTTATTTGCTCTTTGCTTGAACTCCTCCAATaGTTTACTCTACCTGAACTGGTCTGTGATGGATGTGCCTTGCAA | + |
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Preference number: 1 (lower is better) Translates to: PKGERFICSLLELLQ*FTLPELVCDGCALQ Trigger: TTGCAAGGCACATCCATCACAGACCAGTTCAGGTAGAGTAAAGCATTGGAGGAGTTCAAGCAAAGAGCAAATAAACCGCTCTCCTTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR CCA 90 bp | AAAGGCAGCAAGGAGACAATGAGATTAACTGGGAAGTTGCCTCCCTaGAGAACCCGTTCACTAACGGGGCTTTTAGCAATTCAGAAACAA | + |
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Preference number: 1 (lower is better) Translates to: KGSKETMRLTGKLPP*RTRSLTGLLAIQKQ Trigger: TTGTTTCTGAATTGCTAAAAGCCCCGTTAGTGAACGGGTTCTCCAGGGAGGCAACTTCCCAGTTAATCTCATTGTCTCCTTGCTGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR GCA 90 bp | AACAAGAAAAACAAGACCCCAAAGGAGAGCGGTTTATTTGCTCTTTaGTTGAACTCCTCCAATGCTTTACTCTACCTGAACTGGTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: NKKNKTPKESGLFAL*LNSSNALLYLNWSV Trigger: CACAGACCAGTTCAGGTAGAGTAAAGCATTGGAGGAGTTCAAGCAAAGAGCAAATAAACCGCTCTCCTTTGGGGTCTTGTTTTTCTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGGAGACAATGAGATTAACTGGGAAGTTGCCTCCCTGGAGAACCCGTTCATCAGCGGGCCACAGCTaGAGCAGCCTCCCTTTGACA | + |
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Preference number: 2 (lower is better) Translates to: SKETMRLTGKLPPWRTRSSAGHS*SSLPLT Trigger: TGTCAAAGGGAGGCTGCTCCAGCTGTGGCCCGCTGA...TGAACGGGTTCTCCAGGGAGGCAACTTCCCAGTTAATCTCATTGTCTCCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR-3UTR GCA 90 bp | TTCCCATCCAGGCTAGTTTTGCTCTTAACTGAACCCCATGTCAATCACCTTGTGGGAGAGCGGTTTATTTaGTCTTTGCTTGAACTCCTC | + |
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Preference number: 2 (lower is better) Translates to: FPSRLVLLLTEPHVNHLVGERFI*SLLELL Trigger: GAGGAGTTCAAGCAAAGAGCAAATAAACCGCTCTCC...CACAAGGTGATTGACATGGGGTTCAGTTAAGAGCAAAACTAGCCTGGATGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR CAA 90 bp | AAGAAAAACAAGACCCCAAAGGAGAGCGGTTTATTTGCTCTTTGCTaGAACTCCTCCAATGCTTTACTCTACCTGAACTGGTCTGTGATG | + |
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Preference number: 2 (lower is better) Translates to: KKNKTPKESGLFALC*NSSNALLYLNWSVM Trigger: CATCACAGACCAGTTCAGGTAGAGTAAAGCATTGGAGGAGTTCAAGCAAAGAGCAAATAAACCGCTCTCCTTTGGGGTCTTGTTTTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR CAA 90 bp | AAACAAGAAAAACAAGACCCCAAAGGAGAGCGGTTTATTTGCTCTTaGCTTGAACTCCTCCAATGCTTTACTCTACCTGAACTGGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: KQEKQDPKGERFICS*LELLQCFTLPELVC Trigger: ACAGACCAGTTCAGGTAGAGTAAAGCATTGGAGGAGTTCAAGCAAAGAGCAAATAAACCGCTCTCCTTTGGGGTCTTGTTTTTCTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR-3UTR GCA 90 bp | CTAGTTTTGCTCTTAACTGAACCCCATGTCAATCACCTTGTGCTGTGTTCTTATCTTGAACTCCTCCAATaGTTTACTCTACCTGAACTG | + |
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Preference number: 2 (lower is better) Translates to: LVLLLTEPHVNHLVLCSYLELLQ*FTLPEL Trigger: CAGTTCAGGTAGAGTAAAGCATTGGAGGAGTTCAAG...ATAAGAACACAGCACAAGGTGATTGACATGGGGTTCAGTTAAGAGCAAAACTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR-3UTR CAA 90 bp | AGCAAGGAGACAATGAGATTAACTGGGAAGTTGCCTCCCTGGAGAACCCGTTCACGGTTTATTTGCTCTTaGCTTGAACTCCTCCAATGC | + |
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Preference number: 3 (lower is better) Translates to: SKETMRLTGKLPPWRTRSRFICS*LELLQC Trigger: GCATTGGAGGAGTTCAAGCAAAGAGCAAATAAACCG...TGAACGGGTTCTCCAGGGAGGCAACTTCCCAGTTAATCTCATTGTCTCCTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR GCA 72 bp | TTACTCTACCTGAACTGGTCTGTGATGGATGTGCCTTaGAATGAGGACGATTGTGCTGGGTTTAATCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: LLYLNWSVMDVP*NEDDCAGFNLA Trigger: GGCAAGATTAAACCCAGCACAATCGTCCTCATTGCAAGGCACATCCATCACAGACCAGTTCAGGTAGAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR CCA 72 bp | TGCTTGAACTCCTCCAATGCTTTACTCTACCTGAACTaGTCTGTGATGGATGTGCCTTGCAATGAGGACGAT | + |
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Preference number: 3 (lower is better) Translates to: CLNSSNALLYLN*SVMDVPCNEDD Trigger: ATCGTCCTCATTGCAAGGCACATCCATCACAGACCAGTTCAGGTAGAGTAAAGCATTGGAGGAGTTCAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR CCA 72 bp | AAGGAGACAATGAGATTAACTGGGAAGTTGCCTCCCTaGAGAACCCGTTCACTAACGGGGCTTTTAGCAATT | + |
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Preference number: 3 (lower is better) Translates to: KETMRLTGKLPP*RTRSLTGLLAI Trigger: AATTGCTAAAAGCCCCGTTAGTGAACGGGTTCTCCAGGGAGGCAACTTCCCAGTTAATCTCATTGTCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR TCA 72 bp | AGACACATTCCCATCCAGGCTAGTTTTGCTCTTAACTaGACCCCATGTCAATCACCTTGTGCTGTGTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: RHIPIQASFALN*TPCQSPCAVFL Trigger: TAAGAACACAGCACAAGGTGATTGACATGGGGTTCAGTTAAGAGCAAAACTAGCCTGGATGGGAATGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR GCA 72 bp | AACAAGACCCCAAAGGAGAGCGGTTTATTTGCTCTTTaGTTGAACTCCTCCAATGCTTTACTCTACCTGAAC | + |
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Preference number: 3 (lower is better) Translates to: NKTPKESGLFAL*LNSSNALLYLN Trigger: GTTCAGGTAGAGTAAAGCATTGGAGGAGTTCAAGCAAAGAGCAAATAAACCGCTCTCCTTTGGGGTCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR-3UTR CAA 90 bp | GTTTTAAATTATTCAAAGACTAAGTTGAGTTTTGAGAGGCAGTGGGAGACATCAGTGCTGGGTTTAATCTaGCCCTTTACAGCTCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: VLNYSKTKLSFERQWETSVLGLI*PFTAPW Trigger: CCAGGGAGCTGTAAAGGGCAAGATTAAACCCAGCAC...TGATGTCTCCCACTGCCTCTCAAAACTCAACTTAGTCTTTGAATAATTTAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR CCA 90 bp | TCCCTGGAGAACCCGTTCACTAACGGGGCTTTTAGCAATTCAGAAACAAGAAAATCCCAGGTTCAGGCCTaGAGCAGCATCCACCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SLENPFTNGAFSNSETRKSQVQA*SSIHLH Trigger: GTGGAGGTGGATGCTGCTCCAGGCCTGAACCTGGGA...TTTTCTTGTTTCTGAATTGCTAAAAGCCCCGTTAGTGAACGGGTTCTCCAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR CAA 72 bp | AAAGGCAGCAAGGAGACAATGAGATTAACTGGGAAGTaGCCTCCCTGGAGAACCCGTTCACTAACGGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: KGSKETMRLTGK*PPWRTRSLTGL Trigger: AAGCCCCGTTAGTGAACGGGTTCTCCAGGGAGGCAACTTCCCAGTTAATCTCATTGTCTCCTTGCTGCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR GCA 90 bp | ACATTCCCATCCAGGCTAGTTTTGCTCTTAACTGAACCCCATGTCAATCACCTTCTTTGGAGACAGAGATaGGAGTGCCATGGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TFPSRLVLLLTEPHVNHLLWRQR*ECHGLQ Trigger: CTGGAGGCCATGGCACTCGCATCTCTGTCTCCAAAG...AAGGTGATTGACATGGGGTTCAGTTAAGAGCAAAACTAGCCTGGATGGGAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR GCA 90 bp | TGGATGTGCCTTGCAATGAGGACGATTGTGCTGGGTTTAATCTTGCCCTTTACAGTTCAGGTTCTGCATTaGCAGTTTCCCATTGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: WMCLAMRTIVLGLILPFTVQVLH*QFPIAP Trigger: GGGGGCAATGGGAAACTGGCAATGCAGAACCTGAAC...TGTAAAGGGCAAGATTAAACCCAGCACAATCGTCCTCATTGCAAGGCACATCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR GCA 90 bp | CCTTGCAATGAGGACGATTGTGCTGGGTTTAATCTTGCCCTTTACAGCTCCCTGAGTCTGGAATTGGATTaGTCCAGGGAGCGCACTTTT | + |
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Preference number: 4 (lower is better) Translates to: PCNEDDCAGFNLALYSSLSLELD*SRERTF Trigger: AAAAGTGCGCTCCCTGGAGCAATCCAATTCCAGACT...CAGGGAGCTGTAAAGGGCAAGATTAAACCCAGCACAATCGTCCTCATTGCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR TCA 90 bp | GCCTCCCTGGAGAACCCGTTCACTAACGGGGCTTTTAGCAATTCAGAAACAAGAACCTCAACTTCCTCTTaGTGTTCCTTTTTGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ASLENPFTNGAFSNSETRTSTSS*CSFLRR Trigger: CCTCCTCAAAAAGGAACATCAAGAGGAAGTTGAGGT...TCTTGTTTCTGAATTGCTAAAAGCCCCGTTAGTGAACGGGTTCTCCAGGGAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR TCA 90 bp | ACATTCCCATCCAGGCTAGTTTTGCTCTTAACTGAACCCCATGTCAATCACCTTTGCGTCTCAGCTCCGTaGCTTGAACCTCGAATCCTT | + |
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Preference number: 4 (lower is better) Translates to: TFPSRLVLLLTEPHVNHLCVSAP*LEPRIL Trigger: AAGGATTCGAGGTTCAAGTCACGGAGCTGAGACGCA...AAGGTGATTGACATGGGGTTCAGTTAAGAGCAAAACTAGCCTGGATGGGAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR GCA 90 bp | CCTTGCAATGAGGACGATTGTGCTGGGTTTAATCTTGCCCTTTACAGCTCCCTGTTGGTTTCGTACCACTaGTTGATCTGGGCTTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: PCNEDDCAGFNLALYSSLLVSYH*LIWASS Trigger: ACTTGAAGCCCAGATCAAGCAGTGGTACGAAACCAA...CAGGGAGCTGTAAAGGGCAAGATTAAACCCAGCACAATCGTCCTCATTGCAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR CCA 90 bp | CCTTGCAATGAGGACGATTGTGCTGGGTTTAATCTTGCCCTTTACAGCTCCCTGTACCACTGCTTGATCTaGGCTTCAAGTCTGGAATTG | + |
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Preference number: 4 (lower is better) Translates to: PCNEDDCAGFNLALYSSLYHCLI*ASSLEL Trigger: CAATTCCAGACTTGAAGCCCAGATCAAGCAGTGGTA...CAGGGAGCTGTAAAGGGCAAGATTAAACCCAGCACAATCGTCCTCATTGCAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR TCA 90 bp | TCCCTGGAGAACCCGTTCACTAACGGGGCTTTTAGCAATTCAGAAACAAGAAAATTTCGTACCACTGCTTaGTCTGGGCTTCAAGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SLENPFTNGAFSNSETRKFRTTA*SGLQVW Trigger: CCAGACTTGAAGCCCAGATCAAGCAGTGGTACGAAA...TTTTCTTGTTTCTGAATTGCTAAAAGCCCCGTTAGTGAACGGGTTCTCCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR TCA 90 bp | ACATTCCCATCCAGGCTAGTTTTGCTCTTAACTGAACCCCATGTCAATCACCTTGAGACTCTTTCATGCTaGGGTGGGACTGCAACTCTA | + |
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Preference number: 4 (lower is better) Translates to: TFPSRLVLLLTEPHVNHLETLSC*GGTATL Trigger: TAGAGTTGCAGTCCCACCTCAGCATGAAAGAGTCTC...AAGGTGATTGACATGGGGTTCAGTTAAGAGCAAAACTAGCCTGGATGGGAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR GCA 90 bp | TGGATGTGCCTTGCAATGAGGACGATTGTGCTGGGTTTAATCTTGCCCTTTACACTGTCGTTCAGGTTCTaGATTGCCAGTTTCCCATTG | + |
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Preference number: 4 (lower is better) Translates to: WMCLAMRTIVLGLILPFTLSFRF*IASFPL Trigger: CAATGGGAAACTGGCAATGCAGAACCTGAACGACAG...TGTAAAGGGCAAGATTAAACCCAGCACAATCGTCCTCATTGCAAGGCACATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR CCA 90 bp | TGGATGTGCCTTGCAATGAGGACGATTGTGCTGGGTTTAATCTTGCCCTTTACATCTTTCATGCTGAGGTaGGACTGCAACTCTATCTCC | + |
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Preference number: 4 (lower is better) Translates to: WMCLAMRTIVLGLILPFTSFMLR*DCNSIS Trigger: GGAGATAGAGTTGCAGTCCCACCTCAGCATGAAAGA...TGTAAAGGGCAAGATTAAACCCAGCACAATCGTCCTCATTGCAAGGCACATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR TCA 90 bp | CTAGTTTTGCTCTTAACTGAACCCCATGTCAATCACCTTGTGCTGTGTTCTTATGTTCTGTGTCACTCCTaGTCTGCATCAGTTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LVLLLTEPHVNHLVLCSYVLCHS*SASVGP Trigger: AGGCCCAACTGATGCAGATCAGGAGTGACACAGAAC...ATAAGAACACAGCACAAGGTGATTGACATGGGGTTCAGTTAAGAGCAAAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR TCA 90 bp | ACCCCAAAGGAGAGCGGTTTATTTGCTCTTTGCTTGAACTCCTCCAATGCTTTATCTCTTCTATCTCCTTaGCTTCAGAGGACACGACCT | + |
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Preference number: 4 (lower is better) Translates to: TPKESGLFALCLNSSNALSLLSP*LQRTRP Trigger: AGGTCGTGTCCTCTGAAGTCAAGGAGATAGAAGAGA...TAAAGCATTGGAGGAGTTCAAGCAAAGAGCAAATAAACCGCTCTCCTTTGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR GCA 90 bp | ACCCCAAAGGAGAGCGGTTTATTTGCTCTTTGCTTGAACTCCTCCAATGCTTTACAATCTGAAGTCCTCTaGAGCCAGCTTAGCATTGTC | + |
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Preference number: 4 (lower is better) Translates to: TPKESGLFALCLNSSNALQSEVL*SQLSIV Trigger: GACAATGCTAAGCTGGCTGCAGAGGACTTCAGATTG...TAAAGCATTGGAGGAGTTCAAGCAAAGAGCAAATAAACCGCTCTCCTTTGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR CAA 72 bp | TGCCTTGCAATGAGGACGATTGTGCTGGGTTTAATCTaGCCCTTTACAGCTCCCTGGAGTGAACCATTTATA | + |
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Preference number: 4 (lower is better) Translates to: CLAMRTIVLGLI*PFTAPWSEPFI Trigger: TATAAATGGTTCACTCCAGGGAGCTGTAAAGGGCAAGATTAAACCCAGCACAATCGTCCTCATTGCAAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR CAA 72 bp | AAGACCCCAAAGGAGAGCGGTTTATTTGCTCTTTGCTaGAACTCCTCCAATGCTTTACTCTACCTGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: KTPKESGLFALC*NSSNALLYLNW Trigger: CCAGTTCAGGTAGAGTAAAGCATTGGAGGAGTTCAAGCAAAGAGCAAATAAACCGCTCTCCTTTGGGGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR TCA 90 bp | AAACAAGAAAAACAAGACCCCAAAGGAGAGCGGTTTATTTGCTCTTTGCTTGAACCTCCGTGTTCACTGTaGCTTGTTGCTGCAGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: KQEKQDPKGERFICSLLEPPCSL*LVAAEF Trigger: AAACTCTGCAGCAACAAGTCACAGTGAACACGGAGG...TTCAAGCAAAGAGCAAATAAACCGCTCTCCTTTGGGGTCTTGTTTTTCTTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| 3UTR CAA 72 bp | AAACAAGACCCCAAAGGAGAGCGGTTTATTTGCTCTTaGCTTGAACTCCTCCAATGCTTTACTCTACCTGAA | + |
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Preference number: 4 (lower is better) Translates to: KQDPKGERFICS*LELLQCFTLPE Trigger: TTCAGGTAGAGTAAAGCATTGGAGGAGTTCAAGCAAAGAGCAAATAAACCGCTCTCCTTTGGGGTCTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR TCA 90 bp | AAACAAGAAAAACAAGACCCCAAAGGAGAGCGGTTTATTTGCTCTTTGCTTGAATGTTGCTGCAGAGTTTaGCTCTGTCTCTCGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: KQEKQDPKGERFICSLLECCCRV*LCLSNC Trigger: ACAGTTCGAGAGACAGAGTCAAACTCTGCAGCAACA...TTCAAGCAAAGAGCAAATAAACCGCTCTCCTTTGGGGTCTTGTTTTTCTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR CCA 90 bp | TTTAGCAATTCAGAAACAAGAAAAACAAGACCCCAAAGGAGAGCGGTTTATTTGACTTTGCTCAGGCCTTaGAGATCAGCTTCCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: FSNSETRKTRPQRRAVYLTLLRP*RSASTA Trigger: AGCTGTGGAAGCTGATCTCCAAGGCCTGAGCAAAGT...CAAATAAACCGCTCTCCTTTGGGGTCTTGTTTTTCTTGTTTCTGAATTGCTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR CCA 90 bp | TTCCCATCCAGGCTAGTTTTGCTCTTAACTGAACCCCATGTCAATCACCTTGTGTCCAAAGTGCTCAGCTaGTATTCTGTAGTTTTTATA | + |
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Preference number: 4 (lower is better) Translates to: FPSRLVLLLTEPHVNHLVSKVLS*YSVVFI Trigger: TATAAAAACTACAGAATACCAGCTGAGCACTTTGGA...CACAAGGTGATTGACATGGGGTTCAGTTAAGAGCAAAACTAGCCTGGATGGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR CCA 90 bp | GTTTTAAATTATTCAAAGACTAAGTTGAGTTTTGAGAGGCAGTGGGAGACATCATCTCGAACTGTTCTTTaGCCTCTTGCAGGTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VLNYSKTKLSFERQWETSSRTVL*PLAGSS Trigger: AGAAGAACCTGCAAGAGGCCAAAGAACAGTTCGAGA...TGATGTCTCCCACTGCCTCTCAAAACTCAACTTAGTCTTTGAATAATTTAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS-3UTR TCA 90 bp | GTTTTAAATTATTCAAAGACTAAGTTGAGTTTTGAGAGGCAGTGGGAGACATCATCTTCCTGGTTTTCTTaGTATCCTTCATTTCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: VLNYSKTKLSFERQWETSSSWFS*YPSFPK Trigger: CTTTGGAAATGAAGGATATCAAGAAAACCAGGAAGA...TGATGTCTCCCACTGCCTCTCAAAACTCAACTTAGTCTTTGAATAATTTAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS TCA 90 bp | CCAGACGCTGCACAGTCCCCTTCCTATACAGCGAGCCACTCATGCTaGGTGCTGGGCCTTGTGAGGAGGAACTCAGACTTCGGTGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: PDAAQSPSYTASHSC*VLGLVRRNSDFGEN Trigger: GTTTTCACCGAAGTCTGAGTTCCTCCTCACAAGGCCCAGCACTCAGCATGAGTGGCTCGCTGTATAGGAAGGGGACTGTGCAGCGTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS TCA 90 bp | TATAGTCTCGGATGGTGCTCGGCGCGTTGGTTTCGTACCACTGCTTaGTCTGGGCTTCAAGTCTGGAATTGGATTGCTCCAGGGAGCGCA | + |
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Preference number: 5 (lower is better) Translates to: YSLGWCSARWFRTTA*SGLQVWNWIAPGSA Trigger: TGCGCTCCCTGGAGCAATCCAATTCCAGACTTGAAGCCCAGATCAAGCAGTGGTACGAAACCAACGCGCCGAGCACCATCCGAGACTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS TCA 90 bp | CGAGAAGGATGTTGTGTTCTTGGTTCTGGCGTTCTGTGTCACTCCTaGTCTGCATCAGTTGGGCCTCCAGGGAGCTCAGCATCTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: REGCCVLGSGVLCHS*SASVGPPGSSASPG Trigger: TCCAGGAGATGCTGAGCTCCCTGGAGGCCCAACTGATGCAGATCAGGAGTGACACAGAACGCCAGAACCAAGAACACAACATCCTTCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS CCA 90 bp | TCTGCATTGCCAGTTTCCCATTGCCCCCAAACAGGTCCGATCCGTTaGAGAGATCACCCCCGTAGCTCATTACGGCTTTGGAGACAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SALPVSHCPQTGPIR*RDHPRSSLRLWRQR Trigger: TCTCTGTCTCCAAAGCCGTAATGAGCTACGGGGGTGATCTCTCCAACGGATCGGACCTGTTTGGGGGCAATGGGAAACTGGCAATGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS CCA 90 bp | TCTCGGATGGTGCTCGGCGCGTTGGTTTCGTACCACTGCTTGATCTaGGCTTCAAGTCTGGAATTGGATTGCTCCAGGGAGCGCACTTTT | + |
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Preference number: 5 (lower is better) Translates to: SRMVLGALVSYHCLI*ASSLELDCSRERTF Trigger: AAAAGTGCGCTCCCTGGAGCAATCCAATTCCAGACTTGAAGCCCAGATCAAGCAGTGGTACGAAACCAACGCGCCGAGCACCATCCGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS TCA 90 bp | CCCCTTCCTATACAGCGAGCCACTCATGCTGAGTGCTGGGCCTTGTaGGGAGGAACTCAGACTTCGGTGAAAACTTTGACGACTGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: PLPIQRATHAECWAL*GGTQTSVKTLTTEI Trigger: GATTTCAGTCGTCAAAGTTTTCACCGAAGTCTGAGTTCCTCCTCACAAGGCCCAGCACTCAGCATGAGTGGCTCGCTGTATAGGAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | TGGATGTGCCTTGCAATGAGGACGATTGTGCTGGGTTTAATCTTGCCCTTTACAATGGTGCTCGGCGCGTaGGTTTCGTACCACTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WMCLAMRTIVLGLILPFTMVLGA*VSYHCL Trigger: CAAGCAGTGGTACGAAACCAACGCGCCGAGCACCAT...TGTAAAGGGCAAGATTAAACCCAGCACAATCGTCCTCATTGCAAGGCACATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGAGACAATGAGATTAACTGGGAAGTTGCCTCCCTGGAGAACCCGTTCATTGACGTCCTCTAGGTaGCGCTCCAGAGACTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKETMRLTGKLPPWRTRSLTSSR*RSRDSF Trigger: GAAAGAGTCTCTGGAGCGCAACCTAGAGGACGTCAA...TGAACGGGTTCTCCAGGGAGGCAACTTCCCAGTTAATCTCATTGTCTCCTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS TCA 90 bp | TTGACATTGTTGCCCAGCTGCCGGCGAAGAACCTCAACTTCCTCTTaGTGTTCCTTTTTGAGGAGGGCCAGGTCCTTGTTCAGTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTLLPSCRRRTSTSS*CSFLRRARSLFSSS Trigger: TGAAGAACTGAACAAGGACCTGGCCCTCCTCAAAAAGGAACATCAAGAGGAAGTTGAGGTTCTTCGCCGGCAGCTGGGCAACAATGTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS TCA 90 bp | CCAGCTGCCGGCGAAGAACCTCAACTTCCTCTTGATGTTCCTTTTTaGGGAGGGCCAGGTCCTTGTTCAGTTCTTCAATCTGAATTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAAGEEPQLPLDVPF*GGPGPCSVLQSEFP Trigger: TGGAAATTCAGATTGAAGAACTGAACAAGGACCTGGCCCTCCTCAAAAAGGAACATCAAGAGGAAGTTGAGGTTCTTCGCCGGCAGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | CCTTGCAATGAGGACGATTGTGCTGGGTTTAATCTTGCCCTTTACAGCTCCCTGCGTGTTCACTGTGACTaGTTGCTGCAGAGTTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PCNEDDCAGFNLALYSSLRVHCD*LLQSLT Trigger: AGTCAAACTCTGCAGCAACAAGTCACAGTGAACACG...CAGGGAGCTGTAAAGGGCAAGATTAAACCCAGCACAATCGTCCTCATTGCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | ACCCCAAAGGAGAGCGGTTTATTTGCTCTTTGCTTGAACTCCTCCAATGCTTTAATTGCCAGTTTCCCATaGCCCCCAAACAGGTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: TPKESGLFALCLNSSNALIASFP*PPNRSD Trigger: ATCGGACCTGTTTGGGGGCAATGGGAAACTGGCAAT...TAAAGCATTGGAGGAGTTCAAGCAAAGAGCAAATAAACCGCTCTCCTTTGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | TGGATGTGCCTTGCAATGAGGACGATTGTGCTGGGTTTAATCTTGCCCTTTACACTCTCTTCTATCTCCTaGACTTCAGAGGACACGACC | + |
|
Preference number: 5 (lower is better) Translates to: WMCLAMRTIVLGLILPFTLSSIS*TSEDTT Trigger: GGTCGTGTCCTCTGAAGTCAAGGAGATAGAAGAGAG...TGTAAAGGGCAAGATTAAACCCAGCACAATCGTCCTCATTGCAAGGCACATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | GCCTCCCTGGAGAACCCGTTCACTAACGGGGCTTTTAGCAATTCAGAAACAAGACTGGGCATTTTGTACTaGAGCATCCTTAACCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: ASLENPFTNGAFSNSETRLGILY*SILNLI Trigger: AATCAGGTTAAGGATGCTCAAGTACAAAATGCCCAG...TCTTGTTTCTGAATTGCTAAAAGCCCCGTTAGTGAACGGGTTCTCCAGGGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | TGGATGTGCCTTGCAATGAGGACGATTGTGCTGGGTTTAATCTTGCCCTTTACAGTTCACTGTGACTTGTaGCTGCAGAGTTTGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WMCLAMRTIVLGLILPFTVHCDL*LQSLTL Trigger: CAGAGTCAAACTCTGCAGCAACAAGTCACAGTGAAC...TGTAAAGGGCAAGATTAAACCCAGCACAATCGTCCTCATTGCAAGGCACATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | TGGATGTGCCTTGCAATGAGGACGATTGTGCTGGGTTTAATCTTGCCCTTTACAATGTCGAGAAGGATGTaGTGTTCTTGGTTCTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: WMCLAMRTIVLGLILPFTMSRRM*CSWFWR Trigger: ACGCCAGAACCAAGAACACAACATCCTTCTCGACAT...TGTAAAGGGCAAGATTAAACCCAGCACAATCGTCCTCATTGCAAGGCACATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | ACATTCCCATCCAGGCTAGTTTTGCTCTTAACTGAACCCCATGTCAATCACCTTTTGTTGCTGCAGAGTTaGACTCTGTCTCTCGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: TFPSRLVLLLTEPHVNHLLLLQS*TLSLEL Trigger: CAGTTCGAGAGACAGAGTCAAACTCTGCAGCAACAA...AAGGTGATTGACATGGGGTTCAGTTAAGAGCAAAACTAGCCTGGATGGGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | TTCCCATCCAGGCTAGTTTTGCTCTTAACTGAACCCCATGTCAATCACCTTGTGCTTTTTCTAGGTAGTTaGCCAATCTGTCGTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FPSRLVLLLTEPHVNHLVLFLGS*PICRSG Trigger: ACCTGAACGACAGATTGGCAAACTACCTAGAAAAAG...CACAAGGTGATTGACATGGGGTTCAGTTAAGAGCAAAACTAGCCTGGATGGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | TTTAGCAATTCAGAAACAAGAAAAACAAGACCCCAAAGGAGAGCGGTTTATTTGGCTTCAAGTCTGGAATaGGATTGCTCCAGGGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: FSNSETRKTRPQRRAVYLASSLE*DCSRER Trigger: GCGCTCCCTGGAGCAATCCAATTCCAGACTTGAAGC...CAAATAAACCGCTCTCCTTTGGGGTCTTGTTTTTCTTGTTTCTGAATTGCTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | CTAGTTTTGCTCTTAACTGAACCCCATGTCAATCACCTTGTGCTGTGTTCTTATGTTTCGTACCACTGCTaGATCTGGGCTTCAAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVLLLTEPHVNHLVLCSYVSYHC*IWASSL Trigger: CAGACTTGAAGCCCAGATCAAGCAGTGGTACGAAAC...ATAAGAACACAGCACAAGGTGATTGACATGGGGTTCAGTTAAGAGCAAAACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | TTTAGCAATTCAGAAACAAGAAAAACAAGACCCCAAAGGAGAGCGGTTTATTTGGCAGCCAGCTTAGCATaGTCAATTCGCAGGACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FSNSETRKTRPQRRAVYLAASLA*SIRRTH Trigger: GTGCGTCCTGCGAATTGACAATGCTAAGCTGGCTGC...CAAATAAACCGCTCTCCTTTGGGGTCTTGTTTTTCTTGTTTCTGAATTGCTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CCA 90 bp | ATCTTCCTGGTTTTCTTGATATCCTTCATTTCCAAAGTGCTCAGCTaGTATTCTGTAGTTTTTATATCTTCTCCCTCCAGAAGGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: IFLVFLISFISKVLS*YSVVFISSPSRRRR Trigger: CCGCCGCCTTCTGGAGGGAGAAGATATAAAAACTACAGAATACCAGCTGAGCACTTTGGAAATGAAGGATATCAAGAAAACCAGGAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | TCCCTGGAGAACCCGTTCACTAACGGGGCTTTTAGCAATTCAGAAACAAGAAAAAACCTCAACTTCCTCTaGATGTTCCTTTTTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLENPFTNGAFSNSETRKNLNFL*MFLFEE Trigger: CTCCTCAAAAAGGAACATCAAGAGGAAGTTGAGGTT...TTTTCTTGTTTCTGAATTGCTAAAAGCCCCGTTAGTGAACGGGTTCTCCAGGGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | ACCCCAAAGGAGAGCGGTTTATTTGCTCTTTGCTTGAACTCCTCCAATGCTTTAATCCTTAACCTGATTTaGCAGCTCTTTAATCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TPKESGLFALCLNSSNALILNLI*QLFNLC Trigger: GCACAGATTAAAGAGCTGCAAAATCAGGTTAAGGAT...TAAAGCATTGGAGGAGTTCAAGCAAAGAGCAAATAAACCGCTCTCCTTTGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | GTTTTAAATTATTCAAAGACTAAGTTGAGTTTTGAGAGGCAGTGGGAGACATCAAACTTTGCTCAGGCCTaGGAGATCAGCTTCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLNYSKTKLSFERQWETSNFAQA*EISFHS Trigger: GCTGTGGAAGCTGATCTCCAAGGCCTGAGCAAAGTT...TGATGTCTCCCACTGCCTCTCAAAACTCAACTTAGTCTTTGAATAATTTAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | AAACAAGAAAAACAAGACCCCAAAGGAGAGCGGTTTATTTGCTCTTTGCTTGAAAAGGATGTTGTGTTCTaGGTTCTGGCGTTCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KQEKQDPKGERFICSLLEKDVVF*VLAFCV Trigger: GACACAGAACGCCAGAACCAAGAACACAACATCCTT...TTCAAGCAAAGAGCAAATAAACCGCTCTCCTTTGGGGTCTTGTTTTTCTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS-3UTR CAA 90 bp | TTTAGCAATTCAGAAACAAGAAAAACAAGACCCCAAAGGAGAGCGGTTTATTTGGACGCACTGGGCATTTaGTACTTGAGCATCCTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: FSNSETRKTRPQRRAVYLDALGI*YLSILN Trigger: GTTAAGGATGCTCAAGTACAAAATGCCCAGTGCGTC...CAAATAAACCGCTCTCCTTTGGGGTCTTGTTTTTCTTGTTTCTGAATTGCTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS GCA 72 bp | CACCCCCGTAGCTCATTACGGCTTTGGAGACAGAGATaGGAGTGCCATGGCCTCCAGCCCCACCATAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: HPRSSLRLWRQR*ECHGLQPHHRR Trigger: GCGTCTATGGTGGGGCTGGAGGCCATGGCACTCGCATCTCTGTCTCCAAAGCCGTAATGAGCTACGGGGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CAA 90 bp | GTGTTCTTGGTTCTGGCGTTCTGTGTCACTCCTGATCTGCATCAGTaGGGCCTCCAGGGAGCTCAGCATCTCCTGGATGGCTGCCAACTG | + |
|
Preference number: 6 (lower is better) Translates to: VFLVLAFCVTPDLHQ*GLQGAQHLLDGCQL Trigger: CAGTTGGCAGCCATCCAGGAGATGCTGAGCTCCCTGGAGGCCCAACTGATGCAGATCAGGAGTGACACAGAACGCCAGAACCAAGAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS TCA 72 bp | GCACAGTCCCCTTCCTATACAGCGAGCCACTCATGCTaGGTGCTGGGCCTTGTGAGGAGGAACTCAGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: AQSPSYTASHSC*VLGLVRRNSDF Trigger: GAAGTCTGAGTTCCTCCTCACAAGGCCCAGCACTCAGCATGAGTGGCTCGCTGTATAGGAAGGGGACTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CCA 72 bp | CCAGTTTCCCATTGCCCCCAAACAGGTCCGATCCGTTaGAGAGATCACCCCCGTAGCTCATTACGGCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PVSHCPQTGPIR*RDHPRSSLRLW Trigger: CCAAAGCCGTAATGAGCTACGGGGGTGATCTCTCCAACGGATCGGACCTGTTTGGGGGCAATGGGAAACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CCA 72 bp | GTGCTCGGCGCGTTGGTTTCGTACCACTGCTTGATCTaGGCTTCAAGTCTGGAATTGGATTGCTCCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VLGALVSYHCLI*ASSLELDCSRE Trigger: CTCCCTGGAGCAATCCAATTCCAGACTTGAAGCCCAGATCAAGCAGTGGTACGAAACCAACGCGCCGAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CAA 72 bp | CGGATGGTGCTCGGCGCGTTGGTTTCGTACCACTGCTaGATCTGGGCTTCAAGTCTGGAATTGGATTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RMVLGALVSYHC*IWASSLELDCS Trigger: GGAGCAATCCAATTCCAGACTTGAAGCCCAGATCAAGCAGTGGTACGAAACCAACGCGCCGAGCACCATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CAA 72 bp | CTCCAGGTTCTGGTAGGTGCGTCTCAGCTCCGTGACTaGAACCTCGAATCCTTTCAGCTCCTCCGTGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LQVLVGASQLRD*NLESFQLLRVH Trigger: GTGAACACGGAGGAGCTGAAAGGATTCGAGGTTCAAGTCACGGAGCTGAGACGCACCTACCAGAACCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS TCA 72 bp | GGATGGTGCTCGGCGCGTTGGTTTCGTACCACTGCTTaGTCTGGGCTTCAAGTCTGGAATTGGATTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GWCSARWFRTTA*SGLQVWNWIAP Trigger: TGGAGCAATCCAATTCCAGACTTGAAGCCCAGATCAAGCAGTGGTACGAAACCAACGCGCCGAGCACCATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS TCA 72 bp | TTGCCCAGCTGCCGGCGAAGAACCTCAACTTCCTCTTaGTGTTCCTTTTTGAGGAGGGCCAGGTCCTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LPSCRRRTSTSS*CSFLRRARSLF Trigger: GAACAAGGACCTGGCCCTCCTCAAAAAGGAACATCAAGAGGAAGTTGAGGTTCTTCGCCGGCAGCTGGGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS TCA 72 bp | CTATCTCCAGGTTCTGGTAGGTGCGTCTCAGCTCCGTaGCTTGAACCTCGAATCCTTTCAGCTCCTCCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSPGSGRCVSAP*LEPRILSAPPC Trigger: ACACGGAGGAGCTGAAAGGATTCGAGGTTCAAGTCACGGAGCTGAGACGCACCTACCAGAACCTGGAGATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS GCA 72 bp | TCTCGGATGGTGCTCGGCGCGTTGGTTTCGTACCACTaGTTGATCTGGGCTTCAAGTCTGGAATTGGATTGC | + |
|
Preference number: 6 (lower is better) Translates to: SRMVLGALVSYH*LIWASSLELDC Trigger: GCAATCCAATTCCAGACTTGAAGCCCAGATCAAGCAGTGGTACGAAACCAACGCGCCGAGCACCATCCGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS TCA 72 bp | ATACAGCGAGCCACTCATGCTGAGTGCTGGGCCTTGTaGGGAGGAACTCAGACTTCGGTGAAAACTTTGACG | + |
|
Preference number: 6 (lower is better) Translates to: IQRATHAECWAL*GGTQTSVKTLT Trigger: CGTCAAAGTTTTCACCGAAGTCTGAGTTCCTCCTCACAAGGCCCAGCACTCAGCATGAGTGGCTCGCTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS GCA 72 bp | ATCTGTCGTTCAGGTTCTGCATTGCCAGTTTCCCATTaGCCCCAAACAGGTCCGATCCGTTGGAGAGATCAC | + |
|
Preference number: 6 (lower is better) Translates to: ICRSGSALPVSH*PQTGPIRWRDH Trigger: GTGATCTCTCCAACGGATCGGACCTGTTTGGGGGCAATGGGAAACTGGCAATGCAGAACCTGAACGACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CAA 90 bp | GTTGACATTGTTGCCCAGCTGCCGGCGAAGAACCTCAACTTCCTCTaGATGTTCCTTTTTGAGGAGGGCCAGGTCCTTGTTCAGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VDIVAQLPAKNLNFL*MFLFEEGQVLVQFF Trigger: GAAGAACTGAACAAGGACCTGGCCCTCCTCAAAAAGGAACATCAAGAGGAAGTTGAGGTTCTTCGCCGGCAGCTGGGCAACAATGTCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS TCA 72 bp | GAACCTCGAATCCTTTCAGCTCCTCCGTGTTCACTGTaGCTTGTTGCTGCAGAGTTTGACTCTGTCTCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: EPRILSAPPCSL*LVAAEFDSVSR Trigger: TCGAGAGACAGAGTCAAACTCTGCAGCAACAAGTCACAGTGAACACGGAGGAGCTGAAAGGATTCGAGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CAA 72 bp | CTCTCTTCTATCTCCTTGACTTCAGAGGACACGACCTaGCCGTCTACCACTTCTTCCACGACCGTCTTAATC | + |
|
Preference number: 6 (lower is better) Translates to: LSSISLTSEDTT*PSTTSSTTVLI Trigger: GATTAAGACGGTCGTGGAAGAAGTGGTAGACGGCAAGGTCGTGTCCTCTGAAGTCAAGGAGATAGAAGAGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CAA 90 bp | TTGCTGCAGAGTTTGACTCTGTCTCTCGAACTGTTCTTTGGCCTCTaGCAGGTTCTTCTGGGCCAGGACTTCATATCTCTGTCTCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLQSLTLSLELFFGL*QVLLGQDFISLSHL Trigger: GAGATGAGACAGAGATATGAAGTCCTGGCCCAGAAGAACCTGCAAGAGGCCAAAGAACAGTTCGAGAGACAGAGTCAAACTCTGCAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CAA 90 bp | GACTTGAACCTCGAATCCTTTCAGCTCCTCCGTGTTCACTGTGACTaGTTGCTGCAGAGTTTGACTCTGTCTCTCGAACTGTTCTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: DLNLESFQLLRVHCD*LLQSLTLSLELFFG Trigger: GCCAAAGAACAGTTCGAGAGACAGAGTCAAACTCTGCAGCAACAAGTCACAGTGAACACGGAGGAGCTGAAAGGATTCGAGGTTCAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CCA 72 bp | CTCTCGAACTGTTCTTTGGCCTCTTGCAGGTTCTTCTaGGCCAGGACTTCATATCTCTGTCTCATCTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: LSNCSLASCRFF*ARTSYLCLISF Trigger: GAATGAGATGAGACAGAGATATGAAGTCCTGGCCCAGAAGAACCTGCAAGAGGCCAAAGAACAGTTCGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CAA 72 bp | AGTTTGACTCTGTCTCTCGAACTGTTCTTTGGCCTCTaGCAGGTTCTTCTGGGCCAGGACTTCATATCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLTLSLELFFGL*QVLLGQDFISL Trigger: CAGAGATATGAAGTCCTGGCCCAGAAGAACCTGCAAGAGGCCAAAGAACAGTTCGAGAGACAGAGTCAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS TCA 72 bp | GGCGAAGAACCTCAACTTCCTCTTGATGTTCCTTTTTaGGGAGGGCCAGGTCCTTGTTCAGTTCTTCAATCT | + |
|
Preference number: 6 (lower is better) Translates to: GEEPQLPLDVPF*GGPGPCSVLQS Trigger: AGATTGAAGAACTGAACAAGGACCTGGCCCTCCTCAAAAAGGAACATCAAGAGGAAGTTGAGGTTCTTCGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CCA 72 bp | GTCTTTATGTCGAGAAGGATGTTGTGTTCTTGGTTCTaGCGTTCTGTGTCACTCCTGATCTGCATCAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VFMSRRMLCSWF*RSVSLLICISW Trigger: CCAACTGATGCAGATCAGGAGTGACACAGAACGCCAGAACCAAGAACACAACATCCTTCTCGACATAAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CAA 90 bp | GTCTGTCTTTTGAAGAGTCAGATTATCATAAACTTTGCTCAGGCCTaGGAGATCAGCTTCCACAGCTATACGCATTCCCCTCTCAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VCLLKSQIIINFAQA*EISFHSYTHSPLSL Trigger: GAGACTGAGAGGGGAATGCGTATAGCTGTGGAAGCTGATCTCCAAGGCCTGAGCAAAGTTTATGATAATCTGACTCTTCAAAAGACAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CAA 72 bp | CTTAGCATTGTCAATTCGCAGGACGCACTGGGCATTTaGTACTTGAGCATCCTTAACCTGATTTTGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSIVNSQDALGI*YLSILNLILQL Trigger: GAGCTGCAAAATCAGGTTAAGGATGCTCAAGTACAAAATGCCCAGTGCGTCCTGCGAATTGACAATGCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CAA 90 bp | CAGCTTAGCATTGTCAATTCGCAGGACGCACTGGGCATTTTGTACTaGAGCATCCTTAACCTGATTTTGCAGCTCTTTAATCTGTGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: QLSIVNSQDALGILY*SILNLILQLFNLCV Trigger: TACGCACAGATTAAAGAGCTGCAAAATCAGGTTAAGGATGCTCAAGTACAAAATGCCCAGTGCGTCCTGCGAATTGACAATGCTAAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CAA 72 bp | TTGAAGAGTCAGATTATCATAAACTTTGCTCAGGCCTaGGAGATCAGCTTCCACAGCTATACGCATTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LKSQIIINFAQA*EISFHSYTHSP Trigger: AGGGGAATGCGTATAGCTGTGGAAGCTGATCTCCAAGGCCTGAGCAAAGTTTATGATAATCTGACTCTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
||
| CDS CAA 72 bp | CTGGGCATTTTGTACTTGAGCATCCTTAACCTGATTTaGCAGCTCTTTAATCTGTGCGTAGTAGGAGCTATA | + |
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Preference number: 6 (lower is better) Translates to: LGILYLSILNLI*QLFNLCVVGAI Trigger: TATAGCTCCTACTACGCACAGATTAAAGAGCTGCAAAATCAGGTTAAGGATGCTCAAGTACAAAATGCCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS CAA 72 bp | ATTGTCAATTCGCAGGACGCACTGGGCATTTTGTACTaGAGCATCCTTAACCTGATTTTGCAGCTCTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: IVNSQDALGILY*SILNLILQLFN Trigger: ATTAAAGAGCTGCAAAATCAGGTTAAGGATGCTCAAGTACAAAATGCCCAGTGCGTCCTGCGAATTGACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS CAA 90 bp | CAGGTCCTTGTTCAGTTCTTCAATCTGAATTTCCAAGTCTGTCTTTaGAAGAGTCAGATTATCATAAACTTTGCTCAGGCCTTGGAGATC | + |
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Preference number: 6 (lower is better) Translates to: QVLVQFFNLNFQVCL*KSQIIINFAQALEI Trigger: GATCTCCAAGGCCTGAGCAAAGTTTATGATAATCTGACTCTTCAAAAGACAGACTTGGAAATTCAGATTGAAGAACTGAACAAGGACCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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| CDS CCA 72 bp | GTTTTCTTGATATCCTTCATTTCCAAAGTGCTCAGCTaGTATTCTGTAGTTTTTATATCTTCTCCCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: VFLISFISKVLS*YSVVFISSPSR Trigger: TCTGGAGGGAGAAGATATAAAAACTACAGAATACCAGCTGAGCACTTTGGAAATGAAGGATATCAAGAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017743.3 |
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