Pregenerated sensors for KRT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064201Ensembl transcript IDs: ENSMUST00000023712.8
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GGGATGCCAGGTAAACAATGCGAGAGGCGGGAGTGGGACAACGGCTaGAAGACACACTTGGACAATGCAGATTCTTTCCCAGAACACAGT | + |
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Preference number: 2 (lower is better) Translates to: GMPGKQCERREWDNG*KTHLDNADSFPEHS Trigger: ACTGTGTTCTGGGAAAGAATCTGCATTGTCCAAGTGTGTCTTCAAGCCGTTGTCCCACTCCCGCCTCTCGCATTGTTTACCTGGCATCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| 3UTR-3UTR GCA 90 bp | TTATTATGCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGATGCCAGGTAAACAATaGGAGAGGCGGGAGTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: LLCRDPDPNTQKAESIQEMPGKQ*ERREWD Trigger: GTCCCACTCCCGCCTCTCGCATTGTTTACCTGGCAT...CTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCATAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCTATTACAGAGATAACAGCTaGCATTCTGGAATCCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: MQRPRPQHSESRVHSRGYYRDNS*HSGIQE Trigger: CTCTTGGATTCCAGAATGTCAGCTGTTATCTCTGTA...ATAGCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| 3UTR GCA 72 bp | GCACATCGCCATCTGGGAGGGATGCCAGGTAAACAATaGGAGAGGCGGGAGTGGGACAACGGCTTGAAGACA | + |
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Preference number: 3 (lower is better) Translates to: AHRHLGGMPGKQ*ERREWDNGLKT Trigger: TGTCTTCAAGCCGTTGTCCCACTCCCGCCTCTCGCATTGTTTACCTGGCATCCCTCCCAGATGGCGATGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| 3UTR CCA 72 bp | GGAGGGATGCCAGGTAAACAATGCGAGAGGCGGGAGTaGGACAACGGCTTGAAGACACACTTGGACAATGCA | + |
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Preference number: 3 (lower is better) Translates to: GGMPGKQCERRE*DNGLKTHLDNA Trigger: TGCATTGTCCAAGTGTGTCTTCAAGCCGTTGTCCCACTCCCGCCTCTCGCATTGTTTACCTGGCATCCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR TCA 90 bp | ATCGCCATCTGGGAGGGATGCCAGGTAAACAATGCGAGAGGCGGGAGTGGGACACCTCCTCCAGGTCAGTaGGCTTGCCCCTGGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: IAIWEGCQVNNARGGSGTPPPGQ*ACPWHL Trigger: AAGATGCCAGGGGCAAGCTCACTGACCTGGAGGAGG...TGTCCCACTCCCGCCTCTCGCATTGTTTACCTGGCATCCCTCCCAGATGGCGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR TCA 90 bp | GCACATCGCCATCTGGGAGGGATGCCAGGTAAACAATGCGAGAGGCGGGAGTGGGCCACAACCTTCCCCTaGCCCAGAACCTCCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: AHRHLGGMPGKQCERREWATTFP*PRTSLF Trigger: GAAAAGGGAGGTTCTGGGTCAGGGGAAGGTTGTGGC...CCACTCCCGCCTCTCGCATTGTTTACCTGGCATCCCTCCCAGATGGCGATGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CCA 90 bp | AGGCTACCCTGGGGTCCTCAGCACATCGCCATCTGGGAGGGATGCCAGGTAAACCGGATCCAGATCCTCTaGAGCCAGAGCTTCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RLPWGPQHIAIWEGCQVNRIQIL*SQSFCL Trigger: GAGGCAGAAGCTCTGGCTCCAGAGGATCTGGATCCG...GTTTACCTGGCATCCCTCCCAGATGGCGATGTGCTGAGGACCCCAGGGTAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR GCA 90 bp | ATCGCCATCTGGGAGGGATGCCAGGTAAACAATGCGAGAGGCGGGAGTGGGACACACCTCCAAAGCGGCTaGCACCTCCAAATCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: IAIWEGCQVNNARGGSGTHLQSG*HLQILG Trigger: GCCAAGGATTTGGAGGTGGCAGCCGCTTTGGAGGTG...TGTCCCACTCCCGCCTCTCGCATTGTTTACCTGGCATCCCTCCCAGATGGCGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR TCA 90 bp | AGGCTACCCTGGGGTCCTCAGCACATCGCCATCTGGGAGGGATGCCAGGTAAACGTGGTACAGCTCCTCTaGCTCAGCCTTGCTCTTATG | + |
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Preference number: 4 (lower is better) Translates to: RLPWGPQHIAIWEGCQVNVVQLL*LSLALM Trigger: CATAAGAGCAAGGCTGAGTCAGAGGAGCTGTACCAC...GTTTACCTGGCATCCCTCCCAGATGGCGATGTGCTGAGGACCCCAGGGTAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR TCA 90 bp | ATCGCCATCTGGGAGGGATGCCAGGTAAACAATGCGAGAGGCGGGAGTGGGACACAGACACGTTGTCGCTaGAGTCTCCAGACATCCTGC | + |
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Preference number: 4 (lower is better) Translates to: IAIWEGCQVNNARGGSGTQTRCR*SLQTSC Trigger: GCAGGATGTCTGGAGACTTCAGCGACAACGTGTCTG...TGTCCCACTCCCGCCTCTCGCATTGTTTACCTGGCATCCCTCCCAGATGGCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CCA 90 bp | AGGCTACCCTGGGGTCCTCAGCACATCGCCATCTGGGAGGGATGCCAGGTAAACCTAGTATGTCCAGCCTaGCCTGCAGCTCTGTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: RLPWGPQHIAIWEGCQVNLVCPA*PAALSC Trigger: ACAAGACAGAGCTGCAGGCCAGGCTGGACATACTAG...GTTTACCTGGCATCCCTCCCAGATGGCGATGTGCTGAGGACCCCAGGGTAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR TCA 90 bp | ATCGCCATCTGGGAGGGATGCCAGGTAAACAATGCGAGAGGCGGGAGTGGGACAAGGCCAACAAGACTCTaGCTACCAAAGCCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IAIWEGCQVNNARGGSGTRPTRL*LPKPPP Trigger: TGGAGGTGGCTTTGGTAGTCAGAGTCTTGTTGGCCT...TGTCCCACTCCCGCCTCTCGCATTGTTTACCTGGCATCCCTCCCAGATGGCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR TCA 90 bp | AGGCTACCCTGGGGTCCTCAGCACATCGCCATCTGGGAGGGATGCCAGGTAAACAGATGGTGCTGCTTGTaGTGGACACAGACACGTTGT | + |
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Preference number: 4 (lower is better) Translates to: RLPWGPQHIAIWEGCQVNRWCCL*WTQTRC Trigger: ACAACGTGTCTGTGTCCATCACAAGCAGCACCATCT...GTTTACCTGGCATCCCTCCCAGATGGCGATGTGCTGAGGACCCCAGGGTAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CCA 90 bp | GCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCTATGTCTGCTCCTCCTGAGCTaGAGCCACCTCTGGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: AETQTPTLRKQSPFKRLCLLLLS*SHLWSL Trigger: GAGGCTCCAGAGGTGGCTCCAGCTCAGGAGGAGCAG...ACATAGCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR TCA 90 bp | GCACATCGCCATCTGGGAGGGATGCCAGGTAAACAATGCGAGAGGCGGGAGTGGCGTGTTTCACAGCAGTaGCCTGGAGTTCTTCATACT | + |
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Preference number: 4 (lower is better) Translates to: AHRHLGGMPGKQCERREWRVSQQ*PGVLHT Trigger: AGTATGAAGAACTCCAGGTCACTGCTGTGAAACACG...CCACTCCCGCCTCTCGCATTGTTTACCTGGCATCCCTCCCAGATGGCGATGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR TCA 90 bp | GCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCTATGTCTTCCTCCAGAACTTTaGCCCCCAGAGCCGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: AETQTPTLRKQSPFKRLCLPPEL*PPEPKP Trigger: TGGCTTCGGCTCTGGGGGTCAAAGTTCTGGAGGAAG...ACATAGCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR GCA 90 bp | TTATTATGCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGCACCTCCGAAGCCGCTaGCACCTCCAAAGCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLCRDPDPNTQKAESIQEHLRSR*HLQSGC Trigger: GCAGCCGCTTTGGAGGTGGCAGCGGCTTCGGAGGTG...CTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCATAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CCA 90 bp | AGGCTACCCTGGGGTCCTCAGCACATCGCCATCTGGGAGGGATGCCAGGTAAACTTGACAGACACTTCATaGATACCTCCACCAGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: RLPWGPQHIAIWEGCQVNLTDTS*IPPPGN Trigger: ATTCCCTGGTGGAGGTATCCATGAAGTGTCTGTCAA...GTTTACCTGGCATCCCTCCCAGATGGCGATGTGCTGAGGACCCCAGGGTAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR GCA 90 bp | ATGCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCTATATGTCCAGCCTGGCCTaGAGCTCTGTCTTGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: MQRPRPQHSESRVHSRGYMSSLA*SSVLSM Trigger: CATGGACAAGACAGAGCTGCAGGCCAGGCTGGACAT...ATAGCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR GCA 90 bp | TGCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCTATGTGTGATATCTCCCCTTaGAGCCTCTGGATTGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: CRDPDPNTQKAESIQEAMCDISP*SLWIVR Trigger: CCGCACAATCCAGAGGCTGCAAGGGGAGATATCACA...CATAGCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CCA 90 bp | TTATTATGCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGCTCCAGATCCTCCCCTaGAGCCTCCTCCAGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LLCRDPDPNTQKAESIQELQILP*SLLQSC Trigger: ACAGCTCTGGAGGAGGCTCCAGGGGAGGATCTGGAG...CTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCATAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR GCA 90 bp | GCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCTATGTACGCTGCTCTGCATCTaGAATGGAGTCTTGTACACC | + |
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Preference number: 4 (lower is better) Translates to: AETQTPTLRKQSPFKRLCTLLCI*NGVLYT Trigger: GGTGTACAAGACTCCATTGCAGATGCAGAGCAGCGT...ACATAGCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR GCA 90 bp | ACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCTATGTACAAAATGGAGCCAGAGCTTCTaGCTCCAGAGCCATAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: TQTPTLRKQSPFKRLCTKWSQSF*LQSHRC Trigger: GCACCTATGGCTCTGGAGGCAGAAGCTCTGGCTCCA...TTTTGTACATAGCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CCA 90 bp | TTATTATGCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGCTCCAGATCCTCCCCTaGAACCTCCTCCAGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LLCRDPDPNTQKAESIQELQILP*NLLQSC Trigger: ACAGCTCTGGAGGAGGTTCCAGGGGAGGATCTGGAG...CTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCATAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| 3UTR CAA 72 bp | GAGAGGCGGGAGTGGGACAACGGCTTGAAGACACACTaGGACAATGCAGATTCTTTCCCAGAACACAGTATC | + |
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Preference number: 4 (lower is better) Translates to: ERREWDNGLKTH*DNADSFPEHSI Trigger: GATACTGTGTTCTGGGAAAGAATCTGCATTGTCCAAGTGTGTCTTCAAGCCGTTGTCCCACTCCCGCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR GCA 90 bp | AGAGTTAGAGATACAGAGATAACAGCTGACATTCTGGAATCCAAGAGTAGAGAGCACCAGAGCCTCCTCTaGCACCACCGTGGCGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: RVRDTEITADILESKSREHQSLL*HHRGGL Trigger: TAAGCCGCCACGGTGGTGGCAGAGGAGGCTCTGGTG...CTCTCTACTCTTGGATTCCAGAATGTCAGCTGTTATCTCTGTATCTCTAACTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CCA 90 bp | ACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCTATGTACAAAATCCCCTTGCAGCCTCTaGATTGTGCGGTTCAACTCG | + |
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Preference number: 4 (lower is better) Translates to: TQTPTLRKQSPFKRLCTKSPCSL*IVRFNS Trigger: CGAGTTGAACCGCACAATCCAGAGGCTGCAAGGGGA...TTTTGTACATAGCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CCA 90 bp | AGAGTTAGAGATACAGAGATAACAGCTGACATTCTGGAATCCAAGAGTAGAGAGCTCCAGATCCTCCCCTaGAGCCTCCTCCAGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RVRDTEITADILESKSRELQILP*SLLQSH Trigger: ATGGCTCTGGAGGAGGCTCCAGGGGAGGATCTGGAG...CTCTCTACTCTTGGATTCCAGAATGTCAGCTGTTATCTCTGTATCTCTAACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CCA 90 bp | ATCACATCAGGTGGATTACAAATATTGGGGTTAATCAGAGTTAGAGATACAGAGCTCCCCCACCAGAGCTaGAGCCACCTCTGGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: ITSGGLQILGLIRVRDTELPHQS*SHLWSL Trigger: GAGGCTCCAGAGGTGGCTCCAGCTCTGGTGGGGGAG...CTCTGTATCTCTAACTCTGATTAACCCCAATATTTGTAATCCACCTGATGTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR TCA 90 bp | CAATTGCAAATGAAGTTTATTATGCAGAGACCCAGACCCCAACACTCAGAAAGCGGAGAAGCTGGTATTTaGTCTCCGGCTCCCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: QLQMKFIMQRPRPQHSESGEAGI*SPAPSR Trigger: TCTGGAGGGAGCCGGAGATCAAATACCAGCTTCTCC...GCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCATAATAAACTTCATTTGCAATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR TCA 90 bp | AGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCTATGTACAAGCAAGAGGCTCTGATTaGCAGACACTTCATGGATAC | + |
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Preference number: 4 (lower is better) Translates to: RPRPQHSESRVHSRGYVQARGSD*QTLHGY Trigger: GTATCCATGAAGTGTCTGTCAATCAGAGCCTCTTGC...TTGTACATAGCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR GCA 90 bp | TTGCAAATGAAGTTTATTATGCAGAGACCCAGACCCCAACACTCAGAAAGCAGACTCCTCTTCGGGACCTaGAGGAGATCTGGCAACTCA | + |
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Preference number: 4 (lower is better) Translates to: LQMKFIMQRPRPQHSESRLLFGT*RRSGNS Trigger: TGAGTTGCCAGATCTCCTGCAGGTCCCGAAGAGGAG...TCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCATAATAAACTTCATTTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR TCA 90 bp | CAATTGCAAATGAAGTTTATTATGCAGAGACCCAGACCCCAACACTCAGAAAGCCTGCTTCTTCACATGTaGTATCTCCCCTTGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: QLQMKFIMQRPRPQHSESLLLHM*YLPLQP Trigger: AGGCTGCAAGGGGAGATATCACATGTGAAGAAGCAG...GCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCATAATAAACTTCATTTGCAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR GCA 90 bp | TCAGGTGGATTACAAATATTGGGGTTAATCAGAGTTAGAGATACAGAGATAACATGCCTCCAAAGCTGCTaGCACCGTAGCCACCACTGT | + |
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Preference number: 4 (lower is better) Translates to: SGGLQILGLIRVRDTEITCLQSC*HRSHHC Trigger: ACAGTGGTGGCTACGGTGGCAGCAGCTTTGGAGGCA...TGTTATCTCTGTATCTCTAACTCTGATTAACCCCAATATTTGTAATCCACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR GCA 90 bp | TCAGGTGGATTACAAATATTGGGGTTAATCAGAGTTAGAGATACAGAGATAACACTCCAAAGCCACTGCTaGCTCCAAAGCTGCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SGGLQILGLIRVRDTEITLQSHC*LQSCCH Trigger: GTGGCAGCAGCTTTGGAGGCAGCAGTGGCTTTGGAG...TGTTATCTCTGTATCTCTAACTCTGATTAACCCCAATATTTGTAATCCACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CCA 90 bp | CAATTGCAAATGAAGTTTATTATGCAGAGACCCAGACCCCAACACTCAGAAAGCTTATGCAGGAGAAGCTaGTATTTGATCTCCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QLQMKFIMQRPRPQHSESLCRRS*YLISGS Trigger: GGAGCCGGAGATCAAATACCAGCTTCTCCTGCATAA...GCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCATAATAAACTTCATTTGCAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CCA 90 bp | AGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCTATGTACAACACGTTCTGAATCTCTaGGTCTACTTTAACATCAAG | + |
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Preference number: 4 (lower is better) Translates to: RPRPQHSESRVHSRGYVQHVLNL*VYFNIK Trigger: CTTGATGTTAAAGTAGACCCAGAGATTCAGAACGTG...TTGTACATAGCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CCA 90 bp | TCAGGTGGATTACAAATATTGGGGTTAATCAGAGTTAGAGATACAGAGATAACACCACCTCCAAATCCTTaGCCTCCTCCAAAGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SGGLQILGLIRVRDTEITPPPNP*PPPKPE Trigger: CTCTGGCTTTGGAGGAGGCCAAGGATTTGGAGGTGG...TGTTATCTCTGTATCTCTAACTCTGATTAACCCCAATATTTGTAATCCACCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR GCA 90 bp | TCAGGTGGATTACAAATATTGGGGTTAATCAGAGTTAGAGATACAGAGATAACAGGAGTTCTTCATACTTaGTGTGGTACAGCTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SGGLQILGLIRVRDTEITGVLHT*CGTAPL Trigger: CAGAGGAGCTGTACCACAGCAAGTATGAAGAACTCC...TGTTATCTCTGTATCTCTAACTCTGATTAACCCCAATATTTGTAATCCACCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS GCA 90 bp | ATCCTTGGCCACCTCCAAATCCTCGGCCTCCTCCAAAGCCACTGCTaGCTCCAAAGCTGCTGCCACCGTAGCCACCACTGTTGCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: ILGHLQILGLLQSHC*LQSCCHRSHHCCQP Trigger: TGGCTGGCAACAGTGGTGGCTACGGTGGCAGCAGCTTTGGAGGCAGCAGTGGCTTTGGAGGAGGCCGAGGATTTGGAGGTGGCCAAGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS CCA 90 bp | CAGAGCCTCCTCTGCCACCACCGTGGCGGCTTATGCAGGAGAAGCTaGTATTTGATCTCCGGCTCCCTCCAGAGACCACAGCTGAACCGC | + |
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Preference number: 5 (lower is better) Translates to: QSLLCHHRGGLCRRS*YLISGSLQRPQLNR Trigger: GCGGTTCAGCTGTGGTCTCTGGAGGGAGCCGGAGATCAAATACCAGCTTCTCCTGCATAAGCCGCCACGGTGGTGGCAGAGGAGGCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CAA 90 bp | ATCGCCATCTGGGAGGGATGCCAGGTAAACAATGCGAGAGGCGGGAGTGGGACAAGATGGGGTCCAGGTTaGTGGTGCGGCTGCCTACAT | + |
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Preference number: 5 (lower is better) Translates to: IAIWEGCQVNNARGGSGTRWGPG*WCGCLH Trigger: ATGTAGGCAGCCGCACCACAAACCTGGACCCCATCT...TGTCCCACTCCCGCCTCTCGCATTGTTTACCTGGCATCCCTCCCAGATGGCGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS GCA 90 bp | TGCCTATGTAGGCCTGGAAGATGGGGTCCAGGTTTGTGGTGCGGCTaGCTACATCCAACTGCTGCAGGAGTTCCCATTTGGTCCGCAACA | + |
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Preference number: 5 (lower is better) Translates to: CLCRPGRWGPGLWCG*LHPTAAGVPIWSAT Trigger: TGTTGCGGACCAAATGGGAACTCCTGCAGCAGTTGGATGTAGGCAGCCGCACCACAAACCTGGACCCCATCTTCCAGGCCTACATAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS TCA 90 bp | GCTGTAGCTGGGACAGTTCCGCATCGTAGAGTGTTCTCAGGAAGTTaGCTTCCTGTGCTAGTATGTCCAGCCTGGCCTGCAGCTCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: AVAGTVPHRRVFSGS*LPVLVCPAWPAALS Trigger: AGACAGAGCTGCAGGCCAGGCTGGACATACTAGCACAGGAAGTCAACTTCCTGAGAACACTCTACGATGCGGAACTGTCCCAGCTACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CAA 90 bp | GCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCTATGTGCCACCTCCAAATCCTaGGCCTCCTCCAAAGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: AETQTPTLRKQSPFKRLCATSKS*ASSKAR Trigger: TCTGGCTTTGGAGGAGGCCAAGGATTTGGAGGTGGC...ACATAGCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CAA 90 bp | AGGCTACCCTGGGGTCCTCAGCACATCGCCATCTGGGAGGGATGCCAGGTAAACAGTGTTCTCAGGAAGTaGACTTCCTGTGCTAGTATG | + |
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Preference number: 5 (lower is better) Translates to: RLPWGPQHIAIWEGCQVNSVLRK*TSCASM Trigger: CATACTAGCACAGGAAGTCAACTTCCTGAGAACACT...GTTTACCTGGCATCCCTCCCAGATGGCGATGTGCTGAGGACCCCAGGGTAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS TCA 90 bp | AGAACTTTGACCCCCAGAGCCGAAGCCAGTCTTAGATGCCACAGATaGGGAGATGGTGCTGCTTGTGATGGACACAGACACGTTGTCGCT | + |
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Preference number: 5 (lower is better) Translates to: RTLTPRAEASLRCHR*GDGAACDGHRHVVA Trigger: AGCGACAACGTGTCTGTGTCCATCACAAGCAGCACCATCTCCTCATCTGTGGCATCTAAGACTGGCTTCGGCTCTGGGGGTCAAAGTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CAA 90 bp | TGCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCTATGTCCGCAGACGTGCGCTaGTTGATCTCATCCTCGTAC | + |
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Preference number: 5 (lower is better) Translates to: CRDPDPNTQKAESIQEAMSADVR*LISSSY Trigger: GTACGAGGATGAGATCAACAAGCGCACGTCTGCGGA...CATAGCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CAA 90 bp | ATTATGCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCCTACTAGAGATGCTCTaGTACCCGCCGAGGCCAACA | + |
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Preference number: 5 (lower is better) Translates to: IMQRPRPQHSESRVHSRGLLEML*YPPRPT Trigger: TGTTGGCCTCGGCGGGTACAAGAGCATCTCTAGTAG...GCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCATAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CAA 90 bp | TGCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCTATGACGAGATCCTGCATGTaGTTCAGCTCTGACTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: CRDPDPNTQKAESIQEAMTRSCM*FSSDSC Trigger: ACAGGAGTCAGAGCTGAACAACATGCAGGATCTCGT...CATAGCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS CCA 90 bp | ATCTTGATCTCTTTCAAGCTGTCCCCGTGTTTCACAGCAGTGACCTaGAGTTCTTCATACTTGCTGTGGTACAGCTCCTCTGACTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: ILISFKLSPCFTAVT*SSSYLLWYSSSDSA Trigger: GGCTGAGTCAGAGGAGCTGTACCACAGCAAGTATGAAGAACTCCAGGTCACTGCTGTGAAACACGGGGACAGCTTGAAAGAGATCAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CAA 90 bp | TTATTATGCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGAGGAGAAGCTGGTATTaGATCTCCGGCTCCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LLCRDPDPNTQKAESIQERRSWY*ISGSLQ Trigger: CTGGAGGGAGCCGGAGATCAAATACCAGCTTCTCCT...CTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCATAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CAA 90 bp | AGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCTATGTACAAATGGACACAGACACGTaGTCGCTGAAGTCTCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: RPRPQHSESRVHSRGYVQMDTDT*SLKSPD Trigger: GTCTGGAGACTTCAGCGACAACGTGTCTGTGTCCAT...TTGTACATAGCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CAA 90 bp | CAATTGCAAATGAAGTTTATTATGCAGAGACCCAGACCCCAACACTCAGAAAGCTCTTCCTCCAGAACTTaGACCCCCAGAGCCGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: QLQMKFIMQRPRPQHSESSSSRT*TPRAEA Trigger: GGCTTCGGCTCTGGGGGTCAAAGTTCTGGAGGAAGA...GCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCATAATAAACTTCATTTGCAATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS GCA 90 bp | GGAGTTCTTCATACTTGCTGTGGTACAGCTCCTCTGACTCAGCCTTaGTCTTATGGGCGATCATCTCGTATTGATTCTGAACCTCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: GVLHTCCGTAPLTQP*SYGRSSRIDSEPQQ Trigger: TTGCTGAGGTTCAGAATCAATACGAGATGATCGCCCATAAGAGCAAGGCTGAGTCAGAGGAGCTGTACCACAGCAAGTATGAAGAACTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CAA 90 bp | ATGCAGAGACCCAGACCCCAACACTCAGAAAGCAGAGTCCATTCAAGAGGCTATTCGCTGATTTCCATCTaGATCTCTTTCAAGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: MQRPRPQHSESRVHSRGYSLISI*ISFKLS Trigger: GGACAGCTTGAAAGAGATCAAGATGGAAATCAGCGA...ATAGCCTCTTGAATGGACTCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS-3UTR CAA 90 bp | TTGCAAATGAAGTTTATTATGCAGAGACCCAGACCCCAACACTCAGAAAGCAGAAGAAAGCCTGTCCACTaGCTTCTTGAGCATGCCTAT | + |
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Preference number: 5 (lower is better) Translates to: LQMKFIMQRPRPQHSESRRKPVH*LLEHAY Trigger: ATAGGCATGCTCAAGAAGCAAGTGGACAGGCTTTCT...TCTGCTTTCTGAGTGTTGGGGTCTGGGTCTCTGCATAATAAACTTCATTTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS GCA 72 bp | CACCACCTCCGAAGCCGCTGCCACCTCCAAAGCGGCTaGCACCTCCAAATCCTTGGCCTCCTCCAAAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: HHLRSRCHLQSG*HLQILGLLQSQ Trigger: CTGGCTTTGGAGGAGGCCAAGGATTTGGAGGTGGCAGCCGCTTTGGAGGTGGCAGCGGCTTCGGAGGTGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS CAA 72 bp | AGAGCCACCTCCGAAGCCACCGCTGCCTCCAAATCCTaGGCCACCTCCAAATCCTCGGCCTCCTCCAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: RATSEATAASKS*ATSKSSASSKA Trigger: GGCTTTGGAGGAGGCCGAGGATTTGGAGGTGGCCAAGGATTTGGAGGCAGCGGTGGCTTCGGAGGTGGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS GCA 72 bp | CACCAGAGCCTCCTCTGCCACCACCGTGGCGGCTTATaGAGGAGAAGCTGGTATTTGATCTCCGGCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: HQSLLCHHRGGL*RRSWYLISGSL Trigger: GAGGGAGCCGGAGATCAAATACCAGCTTCTCCTGCATAAGCCGCCACGGTGGTGGCAGAGGAGGCTCTGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS GCA 72 bp | GGGTCCAGGTTTGTGGTGCGGCTGCCTACATCCAACTaGTGCAGGAGTTCCCATTTGGTCCGCAACACCTGG | + |
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Preference number: 6 (lower is better) Translates to: GSRFVVRLPTSN*CRSSHLVRNTW Trigger: CCAGGTGTTGCGGACCAAATGGGAACTCCTGCAGCAGTTGGATGTAGGCAGCCGCACCACAAACCTGGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS GCA 72 bp | CAGATCCGGATCCAGATCCTCTGGAGCCAGAGCTTCTaGCTCCAGAGCCATAGGTGCTTCCTCCTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: QIRIQILWSQSF*LQSHRCFLLLL Trigger: GAGGAGGAGGAGGAAGCACCTATGGCTCTGGAGGCAGAAGCTCTGGCTCCAGAGGATCTGGATCCGGATCTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS CCA 72 bp | CTCTGCCACCACCGTGGCGGCTTATGCAGGAGAAGCTaGTATTTGATCTCCGGCTCCCTCCAGAGACCACAG | + |
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Preference number: 6 (lower is better) Translates to: LCHHRGGLCRRS*YLISGSLQRPQ Trigger: CTGTGGTCTCTGGAGGGAGCCGGAGATCAAATACCAGCTTCTCCTGCATAAGCCGCCACGGTGGTGGCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS GCA 72 bp | AGGCCTGGAAGATGGGGTCCAGGTTTGTGGTGCGGCTaGCTACATCCAACTGCTGCAGGAGTTCCCATTTGG | + |
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Preference number: 6 (lower is better) Translates to: RPGRWGPGLWCG*LHPTAAGVPIW Trigger: CCAAATGGGAACTCCTGCAGCAGTTGGATGTAGGCAGCCGCACCACAAACCTGGACCCCATCTTCCAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS GCA 72 bp | CTATGTAGGCCTGGAAGATGGGGTCCAGGTTTGTGGTaGGGCTGCCTACATCCAACTGCTGCAGGAGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LCRPGRWGPGLW*GCLHPTAAGVP Trigger: GGGAACTCCTGCAGCAGTTGGATGTAGGCAGCCGCACCACAAACCTGGACCCCATCTTCCAGGCCTACATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS CAA 72 bp | CACCACCGTGGCGGCTTATGCAGGAGAAGCTGGTATTaGATCTCCGGCTCCCTCCAGAGACCACAGCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: HHRGGLCRRSWY*ISGSLQRPQLN Trigger: GTTCAGCTGTGGTCTCTGGAGGGAGCCGGAGATCAAATACCAGCTTCTCCTGCATAAGCCGCCACGGTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS CAA 72 bp | GCATGCCTATGTAGGCCTGGAAGATGGGGTCCAGGTTaGTGGTGCGGCTGCCTACATCCAACTGCTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: ACLCRPGRWGPG*WCGCLHPTAAG Trigger: TCCTGCAGCAGTTGGATGTAGGCAGCCGCACCACAAACCTGGACCCCATCTTCCAGGCCTACATAGGCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS CAA 90 bp | GCCACAGATGAGGAGATGGTGCTGCTTGTGATGGACACAGACACGTaGTCGCTGAAGTCTCCAGACATCCTGCACTCTTCCCCCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ATDEEMVLLVMDTDT*SLKSPDILHSSPSS Trigger: GCTGGAGGGGGAAGAGTGCAGGATGTCTGGAGACTTCAGCGACAACGTGTCTGTGTCCATCACAAGCAGCACCATCTCCTCATCTGTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS CCA 72 bp | TGCCTATGTAGGCCTGGAAGATGGGGTCCAGGTTTGTaGTGCGGCTGCCTACATCCAACTGCTGCAGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: CLCRPGRWGPGL*CGCLHPTAAGV Trigger: AACTCCTGCAGCAGTTGGATGTAGGCAGCCGCACCACAAACCTGGACCCCATCTTCCAGGCCTACATAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS TCA 72 bp | ACCCCCAGAGCCGAAGCCAGTCTTAGATGCCACAGATaGGGAGATGGTGCTGCTTGTGATGGACACAGACAC | + |
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Preference number: 6 (lower is better) Translates to: TPRAEASLRCHR*GDGAACDGHRH Trigger: GTGTCTGTGTCCATCACAAGCAGCACCATCTCCTCATCTGTGGCATCTAAGACTGGCTTCGGCTCTGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS CAA 72 bp | GAGGAGATGGTGCTGCTTGTGATGGACACAGACACGTaGTCGCTGAAGTCTCCAGACATCCTGCACTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: EEMVLLVMDTDT*SLKSPDILHSS Trigger: GGAAGAGTGCAGGATGTCTGGAGACTTCAGCGACAACGTGTCTGTGTCCATCACAAGCAGCACCATCTCCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS TCA 72 bp | AGGTCCTTTCTGCAGAAAGCCTGTCCACTTGCTTCTTaGGCATGCCTATGTAGGCCTGGAAGATGGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RSFLQKACPLAS*ACLCRPGRWGP Trigger: TGGACCCCATCTTCCAGGCCTACATAGGCATGCTCAAGAAGCAAGTGGACAGGCTTTCTGCAGAAAGGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS CAA 72 bp | CCGTGTTTCACAGCAGTGACCTGGAGTTCTTCATACTaGCTGTGGTACAGCTCCTCTGACTCAGCCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: PCFTAVTWSSSY*LWYSSSDSALL Trigger: GAGCAAGGCTGAGTCAGAGGAGCTGTACCACAGCAAGTATGAAGAACTCCAGGTCACTGCTGTGAAACACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS CCA 72 bp | CTGCTCCCGCTCCTGAGACTTCACGTTCTGAATCTCTaGGTCTACTTTAACATCAAGAGGCTGCAAGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LLPLLRLHVLNL*VYFNIKRLQEA Trigger: AGCCTCTTGCAGCCTCTTGATGTTAAAGTAGACCCAGAGATTCAGAACGTGAAGTCTCAGGAGCGGGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS CCA 72 bp | TTCACAGCAGTGACCTGGAGTTCTTCATACTTGCTGTaGTACAGCTCCTCTGACTCAGCCTTGCTCTTATGG | + |
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Preference number: 6 (lower is better) Translates to: FTAVTWSSSYLL*YSSSDSALLLW Trigger: CCATAAGAGCAAGGCTGAGTCAGAGGAGCTGTACCACAGCAAGTATGAAGAACTCCAGGTCACTGCTGTGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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| CDS GCA 72 bp | CATACTTGCTGTGGTACAGCTCCTCTGACTCAGCCTTaGTCTTATGGGCGATCATCTCGTATTGATTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: HTCCGTAPLTQP*SYGRSSRIDSE Trigger: TTCAGAATCAATACGAGATGATCGCCCATAAGAGCAAGGCTGAGTCAGAGGAGCTGTACCACAGCAAGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023712.8 |
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