RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KRT15 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000054146

Ensembl transcript IDs: ENSMUST00000107411.3

Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTAAGGCACGGACTGGAGCCTGTTTTCCCAGCCTCTATGTCCAGTaGCTCTCTCAGCCCAGGGAGAGCAGGGGAAGGCAAGGTTGTTCT +
Preference number: 1 (lower is better)
Translates to: SKARTGACFPSLYVQ*LSQPRESRGRQGCS
Trigger: AGAACAACCTTGCCTTCCCCTGCTCTCCCTGGGCTGAGAGAGGCACTGGACATAGAGGCTGGGAAAACAGGCTCCAGTCCGTGCCTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
3UTR CAA 90 bp AAACATGATTCTTTATTGAAGGAACAGCCGCCATACAAAGATCTATaGCTTCCTACACCGCTACACTCAGAAGGAAGCCGAGAAAGCTAC +
Preference number: 2 (lower is better)
Translates to: KHDSLLKEQPPYKDL*LPTPLHSEGSRESY
Trigger: GTAGCTTTCTCGGCTTCCTTCTGAGTGTAGCGGTGTAGGAAGCAATAGATCTTTGTATGGCGGCTGTTCCTTCAATAAAGAATCATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR GCA 90 bp GGCACGGACTGGAGCCTGTTTTCCCAGCCTCTATGTCCAGTGCCTCTCTCAGCCCAAAGCCACAACTCATaGCACCCCCAAAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GTDWSLFSQPLCPVPLSAQSHNS*HPQSPL
Trigger: GAGGGGGCTTTGGGGGTGGCATGAGTTGTGGCTTTG...GGCTGAGAGAGGCACTGGACATAGAGGCTGGGAAAACAGGCTCCAGTCCGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR CCA 90 bp GGCACGGACTGGAGCCTGTTTTCCCAGCCTCTATGTCCAGTGCCTCTCTCAGCCGCTGTAGTCCCGATCTaGACTGGCTGGGCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: GTDWSLFSQPLCPVPLSAAVVPI*TGWALL
Trigger: AAGCAGAGCCCAGCCAGTCCAGATCGGGACTACAGC...GGCTGAGAGAGGCACTGGACATAGAGGCTGGGAAAACAGGCTCCAGTCCGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR CCA 90 bp CTAAGGCACGGACTGGAGCCTGTTTTCCCAGCCTCTATGTCCAGTGCCTCTCTCGCCATCTTAGCATCCTaGCCCTCGAGCAGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: LRHGLEPVFPASMSSASLAILAS*PSSRFR
Trigger: CCGGAACCTGCTCGAGGGCCAGGATGCTAAGATGGC...GAGAGAGGCACTGGACATAGAGGCTGGGAAAACAGGCTCCAGTCCGTGCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR TCA 90 bp GCATGCAGAACCACAAACTGGAAAGCAGAGAGATCCTCTAAGGCACGGACTGGATCGGCCTCCACGCCCTaGCGCAGGGTCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: ACRTTNWKAERSSKARTGSASTP*RRVSSF
Trigger: GAATGAGCTGACCCTGCGTCAGGGCGTGGAGGCCGA...TCCAGTCCGTGCCTTAGAGGATCTCTCTGCTTTCCAGTTTGTGGTTCTGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR GCA 90 bp CATGCAGAACCACAAACTGGAAAGCAGAGAGATCCTCTAAGGCACGGACTGGAGTCCCTCCACCAAAGCTaGCTCCCCCAGCACGGAGGG +
Preference number: 4 (lower is better)
Translates to: HAEPQTGKQRDPLRHGLESLHQS*LPQHGG
Trigger: CCCTCCGTGCTGGGGGAGGCAGCTTTGGTGGAGGGA...CTCCAGTCCGTGCCTTAGAGGATCTCTCTGCTTTCCAGTTTGTGGTTCTGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR CCA 90 bp CTAAGGCACGGACTGGAGCCTGTTTTCCCAGCCTCTATGTCCAGTGCCTCTCTCCCGATCTGGACTGGCTaGGCTCTGCTTCTGGTACCA +
Preference number: 4 (lower is better)
Translates to: LRHGLEPVFPASMSSASLPIWTG*ALLLVP
Trigger: TGGTACCAGAAGCAGAGCCCAGCCAGTCCAGATCGG...GAGAGAGGCACTGGACATAGAGGCTGGGAAAACAGGCTCCAGTCCGTGCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR CCA 90 bp AAGGCACGGACTGGAGCCTGTTTTCCCAGCCTCTATGTCCAGTGCCTCTCTCAGAGTCCCGATCTGGACTaGCTGGGCTCTGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: KARTGACFPSLYVQCLSQSPDLD*LGSASG
Trigger: ACCAGAAGCAGAGCCCAGCCAGTCCAGATCGGGACT...CTGAGAGAGGCACTGGACATAGAGGCTGGGAAAACAGGCTCCAGTCCGTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR CCA 90 bp CCTCTAAGGCACGGACTGGAGCCTGTTTTCCCAGCCTCTATGTCCAGTGCCTCTCCGGTAATGACCCCCTaGATCTGCTGCAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PLRHGLEPVFPASMSSASPVMTP*ICCSCV
Trigger: CACACAGCTGCAGCAGATCCAGGGGGTCATTACCGG...AGAGGCACTGGACATAGAGGCTGGGAAAACAGGCTCCAGTCCGTGCCTTAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR TCA 90 bp CTAAGGCACGGACTGGAGCCTGTTTTCCCAGCCTCTATGTCCAGTGCCTCTCTCACCTGGCCAGCCAGTTaGCTGCTGAATTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LRHGLEPVFPASMSSASLTWPAS*LLNSFI
Trigger: GATGAAGGAATTCAGCAGTCAACTGGCTGGCCAGGT...GAGAGAGGCACTGGACATAGAGGCTGGGAAAACAGGCTCCAGTCCGTGCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR TCA 90 bp CATGCAGAACCACAAACTGGAAAGCAGAGAGATCCTCTAAGGCACGGACTGGAGCGGAGCTCACTCAGCTaGGTCTCCAGACCGGTAATG +
Preference number: 4 (lower is better)
Translates to: HAEPQTGKQRDPLRHGLERSSLS*VSRPVM
Trigger: CATTACCGGTCTGGAGACTCAGCTGAGTGAGCTCCG...CTCCAGTCCGTGCCTTAGAGGATCTCTCTGCTTTCCAGTTTGTGGTTCTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR GCA 90 bp GCATGCAGAACCACAAACTGGAAAGCAGAGAGATCCTCTAAGGCACGGACTGGACAGGTCCACCCCGGGTaGTGCGTCCATTTCCACATT +
Preference number: 4 (lower is better)
Translates to: ACRTTNWKAERSSKARTGQVHPG*CVHFHI
Trigger: AATGTGGAAATGGACGCAGCACCCGGGGTGGACCTG...TCCAGTCCGTGCCTTAGAGGATCTCTCTGCTTTCCAGTTTGTGGTTCTGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR CCA 90 bp TCTAAGGCACGGACTGGAGCCTGTTTTCCCAGCCTCTATGTCCAGTGCCTCTCTGCTGGGCTCTGCTTCTaGTACCAATCTCGGATCTTC +
Preference number: 4 (lower is better)
Translates to: SKARTGACFPSLYVQCLSAGLCF*YQSRIF
Trigger: GAAGATCCGAGATTGGTACCAGAAGCAGAGCCCAGC...AGAGAGGCACTGGACATAGAGGCTGGGAAAACAGGCTCCAGTCCGTGCCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR TCA 90 bp GCATGCAGAACCACAAACTGGAAAGCAGAGAGATCCTCTAAGGCACGGACTGGATCCGTCTCAGGTCTGTaGTCTCCGTCTTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ACRTTNWKAERSSKARTGSVSGL*SPSCWS
Trigger: AGACCAGCAAGACGGAGATCACAGACCTGAGACGGA...TCCAGTCCGTGCCTTAGAGGATCTCTCTGCTTTCCAGTTTGTGGTTCTGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR TCA 90 bp GCATGCAGAACCACAAACTGGAAAGCAGAGAGATCCTCTAAGGCACGGACTGGAGTTCCAGCCGAGTCTTaGTGTCCAGCAGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: ACRTTNWKAERSSKARTGVPAES*CPAACC
Trigger: ACAACATGCTGCTGGACATCAAGACTCGGCTGGAAC...TCCAGTCCGTGCCTTAGAGGATCTCTCTGCTTTCCAGTTTGTGGTTCTGCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR TCA 90 bp CATGCAGAACCACAAACTGGAAAGCAGAGAGATCCTCTAAGGCACGGACTGGAGCAGCCAGTTGACTGCTaGATTCCTTCATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HAEPQTGKQRDPLRHGLEQPVDC*IPSSPP
Trigger: AGGAGGAGATGAAGGAATTCAGCAGTCAACTGGCTG...CTCCAGTCCGTGCCTTAGAGGATCTCTCTGCTTTCCAGTTTGTGGTTCTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR GCA 90 bp AAAGCTACAATAGGAAGAGCATGCAGAACCACAAACTGGAAAGCAGAGAGATCCGGACTGGCTGGGCTCTaGTTCTGGTACCAATCTCGG +
Preference number: 4 (lower is better)
Translates to: KATIGRACRTTNWKAERSGLAGL*FWYQSR
Trigger: CCGAGATTGGTACCAGAAGCAGAGCCCAGCCAGTCC...GGATCTCTCTGCTTTCCAGTTTGTGGTTCTGCATGCTCTTCCTATTGTAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR TCA 90 bp CATGCAGAACCACAAACTGGAAAGCAGAGAGATCCTCTAAGGCACGGACTGGAGCACTTTTCCATCCACTaGTTCCTCCACACTGATATG +
Preference number: 4 (lower is better)
Translates to: HAEPQTGKQRDPLRHGLEHFSIH*FLHTDM
Trigger: CATATCAGTGTGGAGGAATCAGTGGATGGAAAAGTG...CTCCAGTCCGTGCCTTAGAGGATCTCTCTGCTTTCCAGTTTGTGGTTCTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR GCA 90 bp CATGCAGAACCACAAACTGGAAAGCAGAGAGATCCTCTAAGGCACGGACTGGAGCCGACGGTTTTTCTCTaGAATAGCTTCATACTGCTC +
Preference number: 4 (lower is better)
Translates to: HAEPQTGKQRDPLRHGLEPTVFL*NSFILL
Trigger: GAGCAGTATGAAGCTATTGCAGAGAAAAACCGTCGG...CTCCAGTCCGTGCCTTAGAGGATCTCTCTGCTTTCCAGTTTGTGGTTCTGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
3UTR CAA 72 bp TCTTTATTGAAGGAACAGCCGCCATACAAAGATCTATaGCTTCCTACACCGCTACACTCAGAAGGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: SLLKEQPPYKDL*LPTPLHSEGSR
Trigger: TCGGCTTCCTTCTGAGTGTAGCGGTGTAGGAAGCAATAGATCTTTGTATGGCGGCTGTTCCTTCAATAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR TCA 90 bp AAACATGATTCTTTATTGAAGGAACAGCCGCCATACAAAGATCTATTGCTTCCTCGTCCATTTCCACATTaGCCTGGCCAGCCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: KHDSLLKEQPPYKDLLLPRPFPH*PGQPVD
Trigger: GTCAACTGGCTGGCCAGGTCAATGTGGAAATGGACG...AGGAAGCAATAGATCTTTGTATGGCGGCTGTTCCTTCAATAAAGAATCATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR CCA 90 bp ACAATAGGAAGAGCATGCAGAACCACAAACTGGAAAGCAGAGAGATCCTCTAAGAGCTGCCTCCAAAAGTaGAAGACGTTTGCAAGAATG +
Preference number: 4 (lower is better)
Translates to: TIGRACRTTNWKAERSSKSCLQK*KTFARM
Trigger: CATTCTTGCAAACGTCTTCCACTTTTGGAGGCAGCT...CTTAGAGGATCTCTCTGCTTTCCAGTTTGTGGTTCTGCATGCTCTTCCTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR CCA 90 bp ACAATAGGAAGAGCATGCAGAACCACAAACTGGAAAGCAGAGAGATCCTCTAAGTCCGTCTTGCTGGTCTaGATCATTTCTGTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: TIGRACRTTNWKAERSSKSVLLV*IISVLD
Trigger: GTCTAACACAGAAATGATCCAGACCAGCAAGACGGA...CTTAGAGGATCTCTCTGCTTTCCAGTTTGTGGTTCTGCATGCTCTTCCTATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR GCA 90 bp AAACATGATTCTTTATTGAAGGAACAGCCGCCATACAAAGATCTATTGCTTCCTTATGGAAATTGCTGCTaGTGCTACTGCTGCCACCGC +
Preference number: 4 (lower is better)
Translates to: KHDSLLKEQPPYKDLLLPYGNCC*CYCCHR
Trigger: GCGGTGGCAGCAGTAGCAGCAGCAGCAATTTCCATA...AGGAAGCAATAGATCTTTGTATGGCGGCTGTTCCTTCAATAAAGAATCATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR CCA 90 bp AAACATGATTCTTTATTGAAGGAACAGCCGCCATACAAAGATCTATTGCTTCCTGCGAGTTGTCAATGGTaGCAGCCAGAATTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: KHDSLLKEQPPYKDLLLPASCQW*QPEFCP
Trigger: GGGACAAAATTCTGGCTGCCACCATTGACAACTCGC...AGGAAGCAATAGATCTTTGTATGGCGGCTGTTCCTTCAATAAAGAATCATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR TCA 90 bp AAGAAACATGATTCTTTATTGAAGGAACAGCCGCCATACAAAGATCTATTGCTTCCAGGGATACTTCTCTaGCACCAATACCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: KKHDSLLKEQPPYKDLLLPGILL*HQYQPS
Trigger: AGATGGCTGGTATTGGTGTCAGAGAAGTATCCCTGG...AAGCAATAGATCTTTGTATGGCGGCTGTTCCTTCAATAAAGAATCATGTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR CAA 90 bp AGGCACGGACTGGAGCCTGTTTTCCCAGCCTCTATGTCCAGTGCCTCTCTCAGCAGCTCATTCTCATACTaGAGCCTGAAGTCGTCCGCC +
Preference number: 5 (lower is better)
Translates to: RHGLEPVFPASMSSASLSSSFSY*SLKSSA
Trigger: GGCGGACGACTTCAGGCTCAAGTATGAGAATGAGCT...GCTGAGAGAGGCACTGGACATAGAGGCTGGGAAAACAGGCTCCAGTCCGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR CAA 90 bp GGCACGGACTGGAGCCTGTTTTCCCAGCCTCTATGTCCAGTGCCTCTCTCAGCCACACTGATATGGAAATaGCTGCTGCTGCTACTGCTG +
Preference number: 5 (lower is better)
Translates to: GTDWSLFSQPLCPVPLSATLIWK*LLLLLL
Trigger: CAGCAGTAGCAGCAGCAGCAATTTCCATATCAGTGT...GGCTGAGAGAGGCACTGGACATAGAGGCTGGGAAAACAGGCTCCAGTCCGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR CAA 90 bp TCTAAGGCACGGACTGGAGCCTGTTTTCCCAGCCTCTATGTCCAGTGCCTCTCTGTGGCAGCCAGAATTTaGTCCCGGATCTCTTCCATG +
Preference number: 5 (lower is better)
Translates to: SKARTGACFPSLYVQCLSVAARI*SRISSM
Trigger: CATGGAAGAGATCCGGGACAAAATTCTGGCTGCCAC...AGAGAGGCACTGGACATAGAGGCTGGGAAAACAGGCTCCAGTCCGTGCCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR CAA 90 bp AAACATGATTCTTTATTGAAGGAACAGCCGCCATACAAAGATCTATTGCTTCCTTGTTCCAGCCGAGTCTaGATGTCCAGCAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: KHDSLLKEQPPYKDLLLPCSSRV*MSSSML
Trigger: CAACATGCTGCTGGACATCAAGACTCGGCTGGAACA...AGGAAGCAATAGATCTTTGTATGGCGGCTGTTCCTTCAATAAAGAATCATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR CAA 90 bp AAGAAACATGATTCTTTATTGAAGGAACAGCCGCCATACAAAGATCTATTGCTTTTAGACGCCACCTCCTaGTTCAGCTCTTCAGTCTTA +
Preference number: 5 (lower is better)
Translates to: KKHDSLLKEQPPYKDLLLLDATS*FSSSVL
Trigger: TAAGACTGAAGAGCTGAACAAGGAGGTGGCGTCTAA...AAGCAATAGATCTTTGTATGGCGGCTGTTCCTTCAATAAAGAATCATGTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS-3UTR CAA 90 bp AAGAAACATGATTCTTTATTGAAGGAACAGCCGCCATACAAAGATCTATTGCTTTCTGTGATCTCCGTCTaGCTGGTCTGGATCATTTCT +
Preference number: 5 (lower is better)
Translates to: KKHDSLLKEQPPYKDLLLSVISV*LVWIIS
Trigger: AGAAATGATCCAGACCAGCAAGACGGAGATCACAGA...AAGCAATAGATCTTTGTATGGCGGCTGTTCCTTCAATAAAGAATCATGTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3
CDS CAA 72 bp CCCTGCAGGGTCCGTCTCAGGTCTGTGATCTCCGTCTaGCTGGTCTGGATCATTTCTGTGTTAGACGCCACC +
Preference number: 6 (lower is better)
Translates to: PCRVRLRSVISV*LVWIISVLDAT
Trigger: GGTGGCGTCTAACACAGAAATGATCCAGACCAGCAAGACGGAGATCACAGACCTGAGACGGACCCTGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107411.3