Pregenerated sensors for KRT10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019761Ensembl transcript IDs: ENSMUST00000103131.5, ENSMUST00000211768.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGTGGCCCGTATaGAGAGACTCTTCTATGCAGCTTAATAGAAGTGTTTCTTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: FLDIYVFHTSVQWPV*RDSSMQLNRSVSWF Trigger: AAACCAAGAAACACTTCTATTAAGCTGCATAGAAGAGTCTCTTCATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTCCAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR TCA 90 bp | TTTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGTGGCCCGTATGAAGAGACCGGAACTGCCGCCGTaGCCACCAGCACCACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: FLGHLCFPHVCPVARMKRPELPP*PPAPPL Trigger: CAGCGGTGGTGCTGGTGGTCACGGCGGCAGTTCCGG...TCTCTTCATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTCCAAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103131.5 ENSMUST00000211768.2 |
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| CDS-3UTR CCA 90 bp | AAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGTGGCCCGTATCGCCCTGGCCTCCGCTaGAACTTCCGCCGCCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: KSVSWTFMFSTRLSSGPYRPGLR*NFRRRS Trigger: GCTACGGCGGCGGAAGTTCCAGCGGAGGCCAGGGCG...ATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103131.5 ENSMUST00000211768.2 |
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| CDS-3UTR GCA 90 bp | TTTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGTGGCCCGTATGAAGAGAAACTTCCGCCGTAGCTaGCGCCGCCGCCGGAACTTC | + |
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Preference number: 4 (lower is better) Translates to: FLGHLCFPHVCPVARMKRNFRRS*RRRRNF Trigger: GAAGTTCCGGCGGCGGCGGCAGCTACGGCGGAAGTT...TCTCTTCATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTCCAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR TCA 90 bp | ACCATTAAGACAAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCCACCGGAACTGCCGCCGTaGCCACCAGCACCACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: TIKTKVFLGHLCFPHVCPPELPP*PPAPPL Trigger: CAGCGGTGGTGCTGGTGGTCACGGCGGCAGTTCCGG...TGGACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTTGTCTTAATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103131.5 ENSMUST00000211768.2 |
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| CDS-3UTR GCA 90 bp | GATTCAATCATAGACGAAAGGACTCTACCCTCAGGTGTCACCTCCTCAATAATCTACCGCCACCAAAGCTaGCTCCACCGAAGCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: DSIIDERTLPSGVTSSIIYRHQS*LHRSCH Trigger: GTGGCAGCTTCGGTGGAGGCAGCTTTGGTGGCGGTA...GATTATTGAGGAGGTGACACCTGAGGGTAGAGTCCTTTCGTCTATGATTGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR CCA 90 bp | TTCCACAGACCATTAAGACAAAAGTGTTTCTTGGACATTTATGTTTTCCACACGCGCCCTGGCCTCCGCTaGAACTTCCGCCGCCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FHRPLRQKCFLDIYVFHTRPGLR*NFRRRS Trigger: GCTACGGCGGCGGAAGTTCCAGCGGAGGCCAGGGCG...CGTGTGGAAAACATAAATGTCCAAGAAACACTTTTGTCTTAATGGTCTGTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103131.5 ENSMUST00000211768.2 |
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| CDS-3UTR TCA 90 bp | TTTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGTGGCCCGTATGAAGAGAGGGCTCTCGCTGGCTTaGGTTGCCATGCTTCTCGTA | + |
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Preference number: 4 (lower is better) Translates to: FLGHLCFPHVCPVARMKRGLSLA*VAMLLV Trigger: TACGAGAAGCATGGCAACTCAAGCCAGCGAGAGCCC...TCTCTTCATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTCCAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR GCA 90 bp | GATTCAATCATAGACGAAAGGACTCTACCCTCAGGTGTCACCTCCTCAATAATCAGCCTCCCCCAAAGCTaGCTCCTCCTCCAAAACCTC | + |
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Preference number: 4 (lower is better) Translates to: DSIIDERTLPSGVTSSIISLPQS*LLLQNL Trigger: GAGGTTTTGGAGGAGGAGGCAGCTTTGGGGGAGGCT...GATTATTGAGGAGGTGACACCTGAGGGTAGAGTCCTTTCGTCTATGATTGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR GCA 90 bp | AAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGTGGCCCGTATTCAGCCCGAATCTGTTaGAGCTGTTCCTCCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: KSVSWTFMFSTRLSSGPYSARIC*SCSSRA Trigger: CGCCCTGGAGGAACAGCTGCAACAGATTCGGGCTGA...ATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR CCA 90 bp | TTTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGTGGCCCGTATGAAGAGAAGTCAGGTCAACCCCTaGGGCAGCGTTCATTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: FLGHLCFPHVCPVARMKRSQVNP*GSVHFH Trigger: GTGGAAATGAACGCTGCCCCAGGGGTTGACCTGACT...TCTCTTCATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTCCAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR CCA 90 bp | CATAGACGAAAGGACTCTACCCTCAGGTGTCACCTCCTCAATAATCGTCCTGATATGTCTAGGAGTTGTTaGTACTCGGCGTTCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: HRRKDSTLRCHLLNNRPDMSRSC*YSAFWH Trigger: GTGCCAGAACGCCGAGTACCAACAACTCCTAGACAT...ATCAGGACGATTATTGAGGAGGTGACACCTGAGGGTAGAGTCCTTTCGTCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR TCA 90 bp | TTTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGTGGCCCGTATGAAGAGATCTCGTATTTCAGCCTaGAGTCATCAGCTGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: FLGHLCFPHVCPVARMKRSRISA*SHQLPG Trigger: GCCTGGCAGCTGATGACTTCAGGCTGAAATACGAGA...TCTCTTCATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTCCAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR GCA 90 bp | CAAGGAGTGAACCTATTTCCACAGACCATTAAGACAAAAGTGTTTCTTGGACATCGCCTCCTCCTCCACTaGGGGAGGAAGAGAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: QGVNLFPQTIKTKVFLGHRLLLH*GRKRTA Trigger: AGCAGTTCTCTTCCTCCCGCAGTGGAGGAGGAGGCG...ATGTCCAAGAAACACTTTTGTCTTAATGGTCTGTGGAAATAGGTTCACTCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR GCA 90 bp | GACTCTACCCTCAGGTGTCACCTCCTCAATAATCGTCCTGATCACTTTGGTTTTTGGCTTGAGTTGCCATaGTTCTCGTACCACTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: DSTLRCHLLNNRPDHFGFWLELP*FSYHSL Trigger: CAAGGAGTGGTACGAGAAGCATGGCAACTCAAGCCA...AAAACCAAAGTGATCAGGACGATTATTGAGGAGGTGACACCTGAGGGTAGAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR TCA 90 bp | CAAGGAGTGAACCTATTTCCACAGACCATTAAGACAAAAGTGTTTCTTGGACATCTCCAGCTCGTAGTTTaGCTCTTCCAGAGCCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: QGVNLFPQTIKTKVFLGHLQLVV*LFQSPD Trigger: GTCCGGGCTCTGGAAGAGTCAAACTACGAGCTGGAG...ATGTCCAAGAAACACTTTTGTCTTAATGGTCTGTGGAAATAGGTTCACTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR TCA 90 bp | TTTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGTGGCCCGTATGAAGAGATCTCCAGTCGGGTCTTaGTGTCTAGGAGTTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLGHLCFPHVCPVARMKRSPVGS*CLGVVG Trigger: ACCAACAACTCCTAGACATCAAGACCCGACTGGAGA...TCTCTTCATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTCCAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR GCA 90 bp | AAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGTGGCCCGTATCTCGCTGGCTTGAGTTaGCATGCTTCTCGTACCACT | + |
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Preference number: 4 (lower is better) Translates to: KSVSWTFMFSTRLSSGPYLAGLS*HASRTT Trigger: AGTGGTACGAGAAGCATGGCAACTCAAGCCAGCGAG...ATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR TCA 90 bp | TTTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGTGGCCCGTATGAAGAGACCAGTGGACACATTTTaGAGGTCTCTCATTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: FLGHLCFPHVCPVARMKRPVDTF*RSLISS Trigger: AGAGGAAATGAGAGACCTTCAAAATGTGTCCACTGG...TCTCTTCATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTCCAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR TCA 90 bp | TTTCCACAGACCATTAAGACAAAAGTGTTTCTTGGACATTTATGTTTTCCACACGCGGAGATCTGGCTTTaGATCTGGGAGAGCTGCACG | + |
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Preference number: 4 (lower is better) Translates to: FPQTIKTKVFLGHLCFPHAEIWL*IWESCT Trigger: CGTGCAGCTCTCCCAGATTCAAAGCCAGATCTCCGC...GTGTGGAAAACATAAATGTCCAAGAAACACTTTTGTCTTAATGGTCTGTGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR GCA 90 bp | AGACCATTAAGACAAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCGCGACCTTCTGTTTCTaGCAAGGAGGCTTCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RPLRQKCFLDIYVFHTSVATFCF*QGGFQR Trigger: TCGCTGGAAGCCTCCTTGGCAGAAACAGAAGGTCGC...GACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTTGTCTTAATGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR TCA 90 bp | AAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGTGGCCCGTATTCAATCTCCAGACCCTaGACAGTACGTCTCAATTCA | + |
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Preference number: 4 (lower is better) Translates to: KSVSWTFMFSTRLSSGPYSISRP*TVRLNS Trigger: TGAATTGAGACGTACTGTTCAGGGTCTGGAGATTGA...ATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR GCA 90 bp | AGACCATTAAGACAAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCCTCCTTCTAGCAGGCTaGGGTAGGTCTGAATCTCGT | + |
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Preference number: 4 (lower is better) Translates to: RPLRQKCFLDIYVFHTSVLLLAG*GRSESR Trigger: ACGAGATTCAGACCTACCGCAGCCTGCTAGAAGGAG...GACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTTGTCTTAATGGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR TCA 90 bp | AGACCATTAAGACAAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCTCTCGTACCACTCCTTaGTTTTACCCTCCAGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: RPLRQKCFLDIYVFHTSVSRTTP*FYPPAR Trigger: ACGAGCTGGAGGGTAAAATCAAGGAGTGGTACGAGA...GACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTTGTCTTAATGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR GCA 90 bp | CAAGGAGTGAACCTATTTCCACAGACCATTAAGACAAAAGTGTTTCTTGGACATTGGTTTTGTAGTATTTaGTGTAGTCCCGGGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: QGVNLFPQTIKTKVFLGHWFCSI*CSPGAL Trigger: GAGAGCCCCGGGACTACAGCAAATACTACAAAACCA...ATGTCCAAGAAACACTTTTGTCTTAATGGTCTGTGGAAATAGGTTCACTCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR CCA 90 bp | AGACCATTAAGACAAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCTGTTTCAGGGCCAGCTaGGACTGTAGTTCAATCTCC | + |
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Preference number: 4 (lower is better) Translates to: RPLRQKCFLDIYVFHTSVCFRAS*DCSSIS Trigger: GGAGATTGAACTACAGTCCCAGCTGGCCCTGAAACA...GACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTTGTCTTAATGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR TCA 90 bp | ACCATTAAGACAAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCCACCTTGCTCTTCTGATTaGACCACTCTTCAGCATCCT | + |
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Preference number: 4 (lower is better) Translates to: TIKTKVFLGHLCFPHVCPPCSSD*TTLQHP Trigger: AGGATGCTGAAGAGTGGTTCAATCAGAAGAGCAAGG...TGGACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTTGTCTTAATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR GCA 90 bp | GATTCAATCATAGACGAAAGGACTCTACCCTCAGGTGTCACCTCCTCAATAATCCTTGCGATTCTTTTCTaGAAGTTGTTCGTATTGGTT | + |
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Preference number: 4 (lower is better) Translates to: DSIIDERTLPSGVTSSIILAILF*KLFVLV Trigger: AACCAATACGAACAACTTGCAGAAAAGAATCGCAAG...GATTATTGAGGAGGTGACACCTGAGGGTAGAGTCCTTTCGTCTATGATTGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR TCA 90 bp | ACCATTAAGACAAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCCATGTCGATTTCTGTGGTaGGTTCCTTGCTCTTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: TIKTKVFLGHLCFPHVCPCRFLW*VPCSSD Trigger: ATCAGAAGAGCAAGGAACTCACCACAGAAATCGACA...TGGACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTTGTCTTAATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR TCA 90 bp | AAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGTGGCCCGTATGTGTTTCTTGGTTTCTaGTTCAATCATAGACGAAAG | + |
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Preference number: 4 (lower is better) Translates to: KSVSWTFMFSTRLSSGPYVFLGF*FNHRRK Trigger: CTTTCGTCTATGATTGAATCAGAAACCAAGAAACAC...ATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211768.2 |
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| CDS-3UTR CCA 90 bp | AAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGTGGCCCGTATTTTCAGACTTATGGCTaGACATTTGTTCAATGTTGC | + |
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Preference number: 4 (lower is better) Translates to: KSVSWTFMFSTRLSSGPYFQTYG*TFVQCC Trigger: GCAACATTGAACAAATGTCCAGCCATAAGTCTGAAA...ATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR CCA 90 bp | TTTCCACAGACCATTAAGACAAAAGTGTTTCTTGGACATTTATGTTTTCCACACAGAACTGCTTGCTGCTaGAGCTGTATAGAACAGACA | + |
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Preference number: 4 (lower is better) Translates to: FPQTIKTKVFLGHLCFPHRTACC*SCIEQT Trigger: TGTCTGTTCTATACAGCTCCAGCAGCAAGCAGTTCT...GTGTGGAAAACATAAATGTCCAAGAAACACTTTTGTCTTAATGGTCTGTGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR TCA 90 bp | TTTCCACAGACCATTAAGACAAAAGTGTTTCTTGGACATTTATGTTTTCCACACTACGTCTCAATTCAGTaGTTTCAGACTTATGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FPQTIKTKVFLGHLCFPHYVSIQ*FQTYGW Trigger: CCAGCCATAAGTCTGAAATCACTGAATTGAGACGTA...GTGTGGAAAACATAAATGTCCAAGAAACACTTTTGTCTTAATGGTCTGTGGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR CCA 90 bp | ACCATTAAGACAAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGCAAGTTGTTCGTATTaGTTTCTCATGTTGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: TIKTKVFLGHLCFPHVCPASCSY*FLMLFS Trigger: GCTGAACAACATGAGAAACCAATACGAACAACTTGC...TGGACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTTGTCTTAATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS TCA 90 bp | GGGGCTCTCGCTGGCTTGAGTTGCCATGCTTCTCGTACCACTCCTTaGTTTTACCCTCCAGCTCGTAGTTTGACTCTTCCAGAGCCCGGA | + |
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Preference number: 5 (lower is better) Translates to: GALAGLSCHASRTTP*FYPPARSLTLPEPG Trigger: TCCGGGCTCTGGAAGAGTCAAACTACGAGCTGGAGGGTAAAATCAAGGAGTGGTACGAGAAGCATGGCAACTCAAGCCAGCGAGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS CCA 90 bp | TTAGTATCCCAGCTAGTTTCAGCTGACCTTGGTCCTTTAGATGATTaGTCGCCGCCACCGGAAGACTTGAAACCTCCGCTTCCGCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: LVSQLVSADLGPLDD*SPPPEDLKPPLPPW Trigger: CCAGGGCGGAAGCGGAGGTTTCAAGTCTTCCGGTGGCGGCGACCAATCATCTAAAGGACCAAGGTCAGCTGAAACTAGCTGGGATACTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211768.2 |
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| CDS-3UTR CAA 90 bp | TTTCTTGGACATTTATGTTTTCCACACGTCTGTCCAGTGGCCCGTATGAAGAGACTCAGCCCGAATCTGTaGCAGCTGTTCCTCCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: FLGHLCFPHVCPVARMKRLSPNL*QLFLQG Trigger: GCCCTGGAGGAACAGCTGCAACAGATTCGGGCTGAG...TCTCTTCATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTCCAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR CAA 90 bp | CAAGGAGTGAACCTATTTCCACAGACCATTAAGACAAAAGTGTTTCTTGGACATGGGGCTCTCGCTGGCTaGAGTTGCCATGCTTCTCGT | + |
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Preference number: 5 (lower is better) Translates to: QGVNLFPQTIKTKVFLGHGALAG*SCHASR Trigger: ACGAGAAGCATGGCAACTCAAGCCAGCGAGAGCCCC...ATGTCCAAGAAACACTTTTGTCTTAATGGTCTGTGGAAATAGGTTCACTCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR CAA 90 bp | AGACCATTAAGACAAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCCCTCCAGCTCGTAGTTaGACTCTTCCAGAGCCCGGA | + |
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Preference number: 5 (lower is better) Translates to: RPLRQKCFLDIYVFHTSVPPARS*TLPEPG Trigger: TCCGGGCTCTGGAAGAGTCAAACTACGAGCTGGAGG...GACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTTGTCTTAATGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR CAA 90 bp | CATAGACGAAAGGACTCTACCCTCAGGTGTCACCTCCTCAATAATCGTCCTGATTGCAAGTTGTTCGTATaGGTTTCTCATGTTGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: HRRKDSTLRCHLLNNRPDCKLFV*VSHVVQ Trigger: CTGAACAACATGAGAAACCAATACGAACAACTTGCA...ATCAGGACGATTATTGAGGAGGTGACACCTGAGGGTAGAGTCCTTTCGTCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR CAA 90 bp | CAAGGAGTGAACCTATTTCCACAGACCATTAAGACAAAAGTGTTTCTTGGACATGAGGAAGAGAACTGCTaGCTGCTGGAGCTGTATAGA | + |
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Preference number: 5 (lower is better) Translates to: QGVNLFPQTIKTKVFLGHEEENC*LLELYR Trigger: TCTATACAGCTCCAGCAGCAAGCAGTTCTCTTCCTC...ATGTCCAAGAAACACTTTTGTCTTAATGGTCTGTGGAAATAGGTTCACTCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR CAA 90 bp | ACCATTAAGACAAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCCATTCTCGTACCACTCCTaGATTTTACCCTCCAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: TIKTKVFLGHLCFPHVCPFSYHS*ILPSSS Trigger: CGAGCTGGAGGGTAAAATCAAGGAGTGGTACGAGAA...TGGACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTTGTCTTAATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR CAA 90 bp | AGACCATTAAGACAAAAGTGTTTCTTGGACATTTATGTTTTCCACACGTCTGTCTTCTCCAGTCGGGTCTaGATGTCTAGGAGTTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: RPLRQKCFLDIYVFHTSVFSSRV*MSRSCW Trigger: CCAACAACTCCTAGACATCAAGACCCGACTGGAGAA...GACAGACGTGTGGAAAACATAAATGTCCAAGAAACACTTTTGTCTTAATGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS-3UTR CAA 90 bp | CAAGGAGTGAACCTATTTCCACAGACCATTAAGACAAAAGTGTTTCTTGGACATATCGTCCTGATCACTTaGGTTTTGTTAGTATCCCAG | + |
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Preference number: 5 (lower is better) Translates to: QGVNLFPQTIKTKVFLGHIVLIT*VLLVSQ Trigger: CTGGGATACTAACAAAACCAAAGTGATCAGGACGAT...ATGTCCAAGAAACACTTTTGTCTTAATGGTCTGTGGAAATAGGTTCACTCCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211768.2 |
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| CDS-3UTR CAA 90 bp | CAAGGAGTGAACCTATTTCCACAGACCATTAAGACAAAAGTGTTTCTTGGACATCTGATCACTTTGGTTTaGTTAGTATCCCAGCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: QGVNLFPQTIKTKVFLGHLITLV*LVSQLV Trigger: AACTAGCTGGGATACTAACAAAACCAAAGTGATCAG...ATGTCCAAGAAACACTTTTGTCTTAATGGTCTGTGGAAATAGGTTCACTCCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211768.2 |
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| CDS CCA 72 bp | CGTGGCTGCCGCCGCCGCGTCCGCCGCCGCCACCGCTaGAGCTTCCCTCTCCTTCTAGCAGGCTGCGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: RGCRRRVRRRHR*SFPLLLAGCGR Trigger: CCTACCGCAGCCTGCTAGAAGGAGAGGGAAGCTCCAGCGGTGGCGGCGGCGGACGCGGCGGCGGCAGCCACG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS TCA 72 bp | ACCCTCCACCAAGAGAGCCCCTGGTGCTGGAAACCCTaGCGGATCCACCACCGCCTCCTCCTCCACTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: TLHQESPWCWKP*RIHHRLLLHCG Trigger: CCCGCAGTGGAGGAGGAGGCGGTGGTGGATCCGTCAGGGTTTCCAGCACCAGGGGCTCTCTTGGTGGAGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS TCA 72 bp | GCTCCCACGGCTAAAAGAGCCACCGCTGAAGCCTCCTaGGCTATACCCTCCACCAAGAGAGCCCCTGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: APTAKRATAEAS*AIPSTKRAPGA Trigger: AGCACCAGGGGCTCTCTTGGTGGAGGGTATAGCTCAGGAGGCTTCAGCGGTGGCTCTTTTAGCCGTGGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS GCA 72 bp | CGCCACCGCTGGAGCTTCCCTCTCCTTCTAGCAGGCTaGGGTAGGTCTGAATCTCGTTCTCCAGTCGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: RHRWSFPLLLAG*GRSESRSPVGS Trigger: AGACCCGACTGGAGAACGAGATTCAGACCTACCGCAGCCTGCTAGAAGGAGAGGGAAGCTCCAGCGGTGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS CCA 72 bp | CAGCTAGTTTCAGCTGACCTTGGTCCTTTAGATGATTaGTCGCCGCCACCGGAAGACTTGAAACCTCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: QLVSADLGPLDD*SPPPEDLKPPL Trigger: AAGCGGAGGTTTCAAGTCTTCCGGTGGCGGCGACCAATCATCTAAAGGACCAAGGTCAGCTGAAACTAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211768.2 |
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| CDS TCA 72 bp | GTAGTATTTGCTGTAGTCCCGGGGCTCTCGCTGGCTTaGGTTGCCATGCTTCTCGTACCACTCCTTGATTTT | + |
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Preference number: 6 (lower is better) Translates to: VVFAVVPGLSLA*VAMLLVPLLDF Trigger: AAAATCAAGGAGTGGTACGAGAAGCATGGCAACTCAAGCCAGCGAGAGCCCCGGGACTACAGCAAATACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS CAA 90 bp | CCCTCAGGTGTCACCTCCTCAATAATCGTCCTGATCACTTTGGTTTaGTTAGTATCCCAGCTAGTTTCAGCTGACCTTGGTCCTTTAGAT | + |
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Preference number: 6 (lower is better) Translates to: PSGVTSSIIVLITLV*LVSQLVSADLGPLD Trigger: ATCTAAAGGACCAAGGTCAGCTGAAACTAGCTGGGATACTAACAAAACCAAAGTGATCAGGACGATTATTGAGGAGGTGACACCTGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211768.2 |
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| CDS CAA 72 bp | GTCACCTCCTCAATAATCGTCCTGATCACTTTGGTTTaGTTAGTATCCCAGCTAGTTTCAGCTGACCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: VTSSIIVLITLV*LVSQLVSADLG Trigger: ACCAAGGTCAGCTGAAACTAGCTGGGATACTAACAAAACCAAAGTGATCAGGACGATTATTGAGGAGGTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211768.2 |
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| CDS CAA 72 bp | GTGATTTCAGACTTATGGCTGGACATTTGTTCAATGTaGCTGTCGATTTCTGTGGTGAGTTCCTTGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VISDLWLDICSM*LSISVVSSLLF Trigger: GAAGAGCAAGGAACTCACCACAGAAATCGACAGCAACATTGAACAAATGTCCAGCCATAAGTCTGAAATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS TCA 72 bp | CAATCTCCAGACCCTGAACAGTACGTCTCAATTCAGTaGTTTCAGACTTATGGCTGGACATTTGTTCAATGT | + |
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Preference number: 6 (lower is better) Translates to: QSPDPEQYVSIQ*FQTYGWTFVQC Trigger: ACATTGAACAAATGTCCAGCCATAAGTCTGAAATCACTGAATTGAGACGTACTGTTCAGGGTCTGGAGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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| CDS CAA 72 bp | TCTCAATTCAGTGATTTCAGACTTATGGCTGGACATTaGTTCAATGTTGCTGTCGATTTCTGTGGTGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: SQFSDFRLMAGH*FNVAVDFCGEF Trigger: GAACTCACCACAGAAATCGACAGCAACATTGAACAAATGTCCAGCCATAAGTCTGAAATCACTGAATTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103131.5 |
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