Pregenerated sensors for KRT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046834Ensembl transcript IDs: ENSMUST00000023790.5
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGCGTGCTaGAGGATATGGGATGCTAAGGGGCAACCCAGTGCTCTGGGCATG | + |
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Preference number: 1 (lower is better) Translates to: NSQTPYVQNQSSSAC*RIWDAKGQPSALGM Trigger: CATGCCCAGAGCACTGGGTTGCCCCTTAGCATCCCATATCCTGCAGCACGCTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| 3UTR GCA 90 bp | ACAAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGCGTaGTGCAGGATATGGGATGCTAAGGGGCAACCCAGTGCTCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: TNSQTPYVQNQSSSA*CRIWDAKGQPSALG Trigger: GCCCAGAGCACTGGGTTGCCCCTTAGCATCCCATATCCTGCAGCACGCTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| 3UTR CCA 90 bp | TGTCATGTTGGTGATGAACTGATGGCAGTTCAGCAGAACATAAAGTaGGATTGTTACCATGGGACTCAGACTGCTACTAATATGAAAACT | + |
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Preference number: 1 (lower is better) Translates to: CHVGDELMAVQQNIK*DCYHGTQTATNMKT Trigger: AGTTTTCATATTAGTAGCAGTCTGAGTCCCATGGTAACAATCCCACTTTATGTTCTGCTGAACTGCCATCAGTTCATCACCAACATGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| 3UTR CAA 90 bp | GCTCTGGGCATGCCAGGCAAGGAAGCCCTAGATCTGAAGTCCTCTTaGAAATGTCATGTTGGTGATGAACTGATGGCAGTTCAGCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: ALGMPGKEALDLKSS*KCHVGDELMAVQQN Trigger: GTTCTGCTGAACTGCCATCAGTTCATCACCAACATGACATTTCAAAGAGGACTTCAGATCTAGGGCTTCCTTGCCTGGCATGCCCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTGGGCATGCCAGGCAAGGAAGCCCTAGATCTGAAGTCCTCTTTGAAATGATGTTGGTGATGAACTaGTGGCAGTTCAGCAGAACA | + |
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Preference number: 2 (lower is better) Translates to: CSGHARQGSPRSEVLFEMMLVMN*WQFSRT Trigger: TGTTCTGCTGAACTGCCATCAGTTCATCACCAACAT...CATTTCAAAGAGGACTTCAGATCTAGGGCTTCCTTGCCTGGCATGCCCAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCATAAAAGACAAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGCAGCAGAACATAAAGTaGGATTGTTACCATGGGACT | + |
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Preference number: 2 (lower is better) Translates to: LHKRQTRKHLMYKTKAAQQQNIK*DCYHGT Trigger: AGTCCCATGGTAACAATCCCACTTTATGTTCTGCTG...CTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTTGTCTTTTATGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| 3UTR-3UTR TCA 90 bp | CGCTCCATAAAAGACAAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGACTGCTACTAATATaGAAACTTCTTTGCAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: RSIKDKLANTLCTKPKQLRLLLI*KLLCKR Trigger: CCTCTTGCAAAGAAGTTTTCATATTAGTAGCAGTCT...GAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTTGTCTTTTATGGAGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| 3UTR TCA 72 bp | GGGATTGATCTTGGTCTTGCCAGCCATGTTTGGCCTTaGTGGAAAGGCAGAGCTAATGGGGCGGTGGTCACC | + |
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Preference number: 3 (lower is better) Translates to: GIDLGLASHVWP*WKGRANGAVVT Trigger: GGTGACCACCGCCCCATTAGCTCTGCCTTTCCATCAAGGCCAAACATGGCTGGCAAGACCAAGATCAATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| 3UTR GCA 72 bp | ACACCTTATGTACAAAACCAAAGCAGCTCAGCGTGCTaGAGGATATGGGATGCTAAGGGGCAACCCAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: TPYVQNQSSSAC*RIWDAKGQPSA Trigger: AGCACTGGGTTGCCCCTTAGCATCCCATATCCTGCAGCACGCTGAGCTGCTTTGGTTTTGTACATAAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| 3UTR GCA 72 bp | CAAACACCTTATGTACAAAACCAAAGCAGCTCAGCGTaGTGCAGGATATGGGATGCTAAGGGGCAACCCAGT | + |
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Preference number: 3 (lower is better) Translates to: QTPYVQNQSSSA*CRIWDAKGQPS Trigger: ACTGGGTTGCCCCTTAGCATCCCATATCCTGCAGCACGCTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| 3UTR CCA 72 bp | GGTGATGAACTGATGGCAGTTCAGCAGAACATAAAGTaGGATTGTTACCATGGGACTCAGACTGCTACTAAT | + |
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Preference number: 3 (lower is better) Translates to: GDELMAVQQNIK*DCYHGTQTATN Trigger: ATTAGTAGCAGTCTGAGTCCCATGGTAACAATCCCACTTTATGTTCTGCTGAACTGCCATCAGTTCATCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| 3UTR TCA 72 bp | GGGATTGTTACCATGGGACTCAGACTGCTACTAATATaGAAACTTCTTTGCAAGAGGAGCAGAAAAGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: GIVTMGLRLLLI*KLLCKRSRKES Trigger: GCTTTCTTTTCTGCTCCTCTTGCAAAGAAGTTTTCATATTAGTAGCAGTCTGAGTCCCATGGTAACAATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR TCA 90 bp | CAAAACCAAAGCAGCTCAGCGTGCTGCAGGATATGGGATGCTAAGGGGCAACCCCAGCAGAGCCTGAGCTaGAGTTCCTGCTGCCACCGC | + |
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Preference number: 4 (lower is better) Translates to: QNQSSSACCRIWDAKGQPQQSLS*SSCCHR Trigger: GCGGTGGCAGCAGGAACTTCAGCTCAGGCTCTGCTG...GGGTTGCCCCTTAGCATCCCATATCCTGCAGCACGCTGAGCTGCTTTGGTTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CCA 90 bp | AAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGCGTGCTGCAGGATCACCGCCACCTGAGCTaGATCCTCCCCGGCCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: KLANTLCTKPKQLSVLQDHRHLS*ILPGLR Trigger: GCGGAGGCCGGGGAGGATCCAGCTCAGGTGGCGGTG...ATCCTGCAGCACGCTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR GCA 90 bp | CCCAGTGCTCTGGGCATGCCAGGCAAGGAAGCCCTAGATCTGAAGTCCTCTTTGCTGGGCATCTTTGAGTaGTTTCTCACCACGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: PSALGMPGKEALDLKSSLLGIFE*FLTTLL Trigger: GAGCAGCGTGGTGAGAAAGCACTCAAAGATGCCCAG...CAAAGAGGACTTCAGATCTAGGGCTTCCTTGCCTGGCATGCCCAGAGCACTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CCA 90 bp | CATGCCAGGCAAGGAAGCCCTAGATCTGAAGTCCTCTTTGAAATGTCATGTTGGCCGCTCATGCTGGTGTaGCTGGTGCTCACCGACACG | + |
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Preference number: 4 (lower is better) Translates to: HARQGSPRSEVLFEMSCWPLMLV*LVLTDT Trigger: CGTGTCGGTGAGCACCAGCCACACCAGCATGAGCGG...CCAACATGACATTTCAAAGAGGACTTCAGATCTAGGGCTTCCTTGCCTGGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR TCA 90 bp | GGGTGGGGTCGTTCAGAGCGCTCCATAAAAGACAAACTCGCAAACACCTTATGTGCAGAAGGCTTTGGTTaGTGGTCACTTCCTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: GWGRSERSIKDKLANTLCAEGFG*WSLPGC Trigger: GCATCCAGGAAGTGACCATCAACCAAAGCCTTCTGC...ACATAAGGTGTTTGCGAGTTTGTCTTTTATGGAGCGCTCTGAACGACCCCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR GCA 90 bp | AAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGCGTGCTGCAGGATTACTGCTTCCGCTCATaGTGGTGTGGCTGGTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: KLANTLCTKPKQLSVLQDYCFRS*WCGWCS Trigger: TGAGCACCAGCCACACCAGCATGAGCGGAAGCAGTA...ATCCTGCAGCACGCTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CCA 90 bp | ATGTACAAAACCAAAGCAGCTCAGCGTGCTGCAGGATATGGGATGCTAAGGGGCTCAGCCTTGCTCCTCTaGCAAATGCTATCATACTGG | + |
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Preference number: 4 (lower is better) Translates to: MYKTKAAQRAAGYGMLRGSALLL*QMLSYW Trigger: CCAGTATGATAGCATTTGCCAGAGGAGCAAGGCTGA...GCCCCTTAGCATCCCATATCCTGCAGCACGCTGAGCTGCTTTGGTTTTGTACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CCA 90 bp | GATGAACTGATGGCAGTTCAGCAGAACATAAAGTGGGATTGTTACCATGGGACTCCGACACGCTCACGTTaGGAGTGCACTCTCCAGACA | + |
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Preference number: 4 (lower is better) Translates to: DELMAVQQNIKWDCYHGTPTRSR*ECTLQT Trigger: TGTCTGGAGAGTGCACTCCCAACGTGAGCGTGTCGG...AGTCCCATGGTAACAATCCCACTTTATGTTCTGCTGAACTGCCATCAGTTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CCA 90 bp | TGCTCTGGGCATGCCAGGCAAGGAAGCCCTAGATCTGAAGTCCTCTTTGAAATGGAAGTTTCTTGTATGTaGCAATCTCCATGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: CSGHARQGSPRSEVLFEMEVSCM*QSPCPG Trigger: CCCTGGACATGGAGATTGCCACATACAAGAAACTTC...CATTTCAAAGAGGACTTCAGATCTAGGGCTTCCTTGCCTGGCATGCCCAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR GCA 90 bp | CATGCCAGGCAAGGAAGCCCTAGATCTGAAGTCCTCTTTGAAATGTCATGTTGGTCAACGTTGAGGGGTTaGAGAAGGCTTTGGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: HARQGSPRSEVLFEMSCWSTLRG*RRLWLM Trigger: CATCAACCAAAGCCTTCTGCAACCCCTCAACGTTGA...CCAACATGACATTTCAAAGAGGACTTCAGATCTAGGGCTTCCTTGCCTGGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR GCA 90 bp | CGCTCCATAAAAGACAAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCTTGCTGGAGGGCATCTaGCTTGGCCTGAAGCTCAAC | + |
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Preference number: 4 (lower is better) Translates to: RSIKDKLANTLCTKPKQLLLEGI*LGLKLN Trigger: GTTGAGCTTCAGGCCAAGGCAGATGCCCTCCAGCAA...GAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTTGTCTTTTATGGAGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR TCA 90 bp | GATGAACTGATGGCAGTTCAGCAGAACATAAAGTGGGATTGTTACCATGGGACTTGTTCTGGGCATCTTTaGGTGCTTTCTCACCACGCT | + |
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Preference number: 4 (lower is better) Translates to: DELMAVQQNIKWDCYHGTCSGHL*VLSHHA Trigger: AGCGTGGTGAGAAAGCACTCAAAGATGCCCAGAACA...AGTCCCATGGTAACAATCCCACTTTATGTTCTGCTGAACTGCCATCAGTTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR TCA 90 bp | GATGAACTGATGGCAGTTCAGCAGAACATAAAGTGGGATTGTTACCATGGGACTACTCTCCAGACATCCTaGTCTCCTCTCCTTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: DELMAVQQNIKWDCYHGTTLQTS*SPLLPE Trigger: TTCTGGAAGGAGAGGAGATCAGGATGTCTGGAGAGT...AGTCCCATGGTAACAATCCCACTTTATGTTCTGCTGAACTGCCATCAGTTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR GCA 90 bp | CGCTCCATAAAAGACAAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCGTTGTGGTGTCTACCTaGTGCAGCAGCTCCCATTTG | + |
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Preference number: 4 (lower is better) Translates to: RSIKDKLANTLCTKPKQLVVVST*CSSSHL Trigger: CAAATGGGAGCTGCTGCAGCAGGTAGACACCACAAC...GAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTTGTCTTTTATGGAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CCA 90 bp | CTCCATAAAAGACAAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGTTGATGGTCACTTCCTaGATGCCACCAGGGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: LHKRQTRKHLMYKTKAAQLMVTS*MPPGGQ Trigger: CTGTCCCCCTGGTGGCATCCAGGAAGTGACCATCAA...CTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTTGTCTTTTATGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CCA 90 bp | GGATTGATCTTGGTCTTGCCAGCCATGTTTGGCCTTGATGGAAAGGCAGAGCTATCAGATCGAAGTCTCTaGATCATTCGATTCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GLILVLPAMFGLDGKAELSDRSL*IIRFSS Trigger: TGAGCTGAATCGAATGATCCAGAGACTTCGATCTGA...TAGCTCTGCCTTTCCATCAAGGCCAAACATGGCTGGCAAGACCAAGATCAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| 3UTR CAA 72 bp | TTTTCTCTAATAAGGCTGGTGGGATTGATCTTGGTCTaGCCAGCCATGTTTGGCCTTGATGGAAAGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: FSLIRLVGLILV*PAMFGLDGKAE Trigger: CTCTGCCTTTCCATCAAGGCCAAACATGGCTGGCAAGACCAAGATCAATCCCACCAGCCTTATTAGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR TCA 90 bp | ATAAAAGACAAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGCGTGGCATCTGCCTTGGCCTaGAGCTCAACTTTGGTCATG | + |
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Preference number: 4 (lower is better) Translates to: IKDKLANTLCTKPKQLSVASALA*SSTLVM Trigger: CATGACCAAAGTTGAGCTTCAGGCCAAGGCAGATGC...CACGCTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTTGTCTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR GCA 90 bp | CTCCATAAAAGACAAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGGTGGTGTCTACCTGCTaGAGCAGCTCCCATTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: LHKRQTRKHLMYKTKAAQVVSTC*SSSHLV Trigger: AACCAAATGGGAGCTGCTGCAGCAGGTAGACACCAC...CTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTTGTCTTTTATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR GCA 90 bp | GAGCGCTCCATAAAAGACAAACTCGCAAACACCTTATGTACAAAACCAAAGCAGTTGCCAGCAGTGATCTaGAGCTCTTCGTACTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: ERSIKDKLANTLCTKPKQLPAVI*SSSYLL Trigger: GAGCAAGTACGAAGAGCTGCAGATCACTGCTGGCAA...CTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTTGTCTTTTATGGAGCGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CCA 90 bp | CATGCCAGGCAAGGAAGCCCTAGATCTGAAGTCCTCTTTGAAATGTCATGTTGGCCTGAAGCTCAACTTTaGTCATGTAAGCTGAATCCA | + |
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Preference number: 4 (lower is better) Translates to: HARQGSPRSEVLFEMSCWPEAQL*SCKLNP Trigger: TGGATTCAGCTTACATGACCAAAGTTGAGCTTCAGG...CCAACATGACATTTCAAAGAGGACTTCAGATCTAGGGCTTCCTTGCCTGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CCA 90 bp | ATAAAAGACAAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGCGTGAAGTCAATGTCTTGCTaGAGGGCATCTGCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: IKDKLANTLCTKPKQLSVKSMSC*RASALA Trigger: GGCCAAGGCAGATGCCCTCCAGCAAGACATTGACTT...CACGCTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTTGTCTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CCA 90 bp | CATGCCAGGCAAGGAAGCCCTAGATCTGAAGTCCTCTTTGAAATGTCATGTTGGTCATTCAGCTTGTTCTaGGCATCTTTGAGTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: HARQGSPRSEVLFEMSCWSFSLF*ASLSAF Trigger: GAAAGCACTCAAAGATGCCCAGAACAAGCTGAATGA...CCAACATGACATTTCAAAGAGGACTTCAGATCTAGGGCTTCCTTGCCTGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR GCA 90 bp | AAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGCGTGCTGCAGGATGGGAGATCTGCTTCTTaGAACCATCAATTTCAGATC | + |
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Preference number: 4 (lower is better) Translates to: KLANTLCTKPKQLSVLQDGRSAS*NHQFQI Trigger: GATCTGAAATTGATGGTTGCAAGAAGCAGATCTCCC...ATCCTGCAGCACGCTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR GCA 90 bp | AAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGCGTGCTGCAGGATGCATCATTGATGTTCTaGTGTATTTGGGAGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: KLANTLCTKPKQLSVLQDASLMF*CIWEIC Trigger: GCAGATCTCCCAAATACAGCAGAACATCAATGATGC...ATCCTGCAGCACGCTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR GCA 90 bp | AAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGCGTGCTGCAGGATTTCCATTTGGTAGAGTaGAGAGAAGAAGTCAATGTC | + |
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Preference number: 4 (lower is better) Translates to: KLANTLCTKPKQLSVLQDFHLVE*REEVNV Trigger: GACATTGACTTCTTCTCTGCACTCTACCAAATGGAA...ATCCTGCAGCACGCTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CCA 90 bp | GGTGATGAACTGATGGCAGTTCAGCAGAACATAAAGTGGGATTGTTACCATGGGCAGAAATCTCCATCTTaGTATTTCTCACACTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GDELMAVQQNIKWDCYHGQKSPS*YFSHCL Trigger: GAGACAGTGTGAGAAATACCAAGATGGAGATTTCTG...CCCATGGTAACAATCCCACTTTATGTTCTGCTGAACTGCCATCAGTTCATCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR TCA 90 bp | CGCTCCATAAAAGACAAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAATCCACATCCTTCTTaGTGGTCACGAACTCATTCT | + |
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Preference number: 4 (lower is better) Translates to: RSIKDKLANTLCTKPKQLNPHPS*WSRTHS Trigger: AGAATGAGTTCGTGACCATCAAGAAGGATGTGGATT...GAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTTGTCTTTTATGGAGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR GCA 90 bp | CTCCATAAAAGACAAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGCACGAACTCATTCTCTaGGTTGGTCCTCTTGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: LHKRQTRKHLMYKTKAAQHELIL*VGPLVD Trigger: ATCAACAAGAGGACCAACGCAGAGAATGAGTTCGTG...CTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTTGTCTTTTATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR GCA 90 bp | CTCCATAAAAGACAAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGCTTGCATTGCGACAATaGATCCTCTATCTCATTCAG | + |
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Preference number: 4 (lower is better) Translates to: LHKRQTRKHLMYKTKAAQLALRQ*ILYLIQ Trigger: CTGAATGAGATAGAGGATGCATTGTCGCAATGCAAG...CTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTTGTCTTTTATGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR TCA 90 bp | AAAGAAAGCGCAGAGAAAATAAGCCTAATCTGTGCAATTAACCATAGCTCTTTTCGTTGGTCCTCTTGTTaGTTTCATCCTCGTACTTGG | + |
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Preference number: 4 (lower is better) Translates to: KESAEKISLICAINHSSFRWSSC*FHPRTW Trigger: CCAAGTACGAGGATGAAATCAACAAGAGGACCAACG...AAAAGAGCTATGGTTAATTGCACAGATTAGGCTTATTTTCTCTGCGCTTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR GCA 90 bp | AAAGAAAGCGCAGAGAAAATAAGCCTAATCTGTGCAATTAACCATAGCTCTTTTAAGAAGTCAATGTCTTaGTGGAGGGCATCTGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: KESAEKISLICAINHSSFKKSMS*WRASAL Trigger: CAAGGCAGATGCCCTCCAGCAAGACATTGACTTCTT...AAAAGAGCTATGGTTAATTGCACAGATTAGGCTTATTTTCTCTGCGCTTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS GCA 90 bp | CGGAGCCGCCGCCGTAGCTGCCGCCTCCGGAGCCGCCGCCGTAGCTaGCACCACTGCCTCCGCCTCCAGAACTGCCGCCGTAGCTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: RSRRRSCRLRSRRRS*HHCLRLQNCRRSCR Trigger: GCGGCAGCTACGGCGGCAGTTCTGGAGGCGGAGGCAGTGGTGGCAGCTACGGCGGCGGCTCCGGAGGCGGCAGCTACGGCGGCGGCTCCG 77% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS GCA 90 bp | CTCTGTGGCTTCCACTGCTGCCGCCTCCGGAGCCGCCGCCGTAGCTaGCGCCTCCGGAGCCGCCGCCGTAGCTGCCACCACTGCCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: LCGFHCCRLRSRRRS*RLRSRRRSCHHCLR Trigger: GCGGAGGCAGTGGTGGCAGCTACGGCGGCGGCTCCGGAGGCGGCAGCTACGGCGGCGGCTCCGGAGGCGGCAGCAGTGGAAGCCACAGAG 76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS GCA 90 bp | CTGAGCTGGATCCTCCCCGGCCTCCGCCAGAGGAGCCACCGTAGCTaGCTCCGGAGCTGCCACCGCCCCCTCCAGAGCCACCTCTGTGGC | + |
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Preference number: 5 (lower is better) Translates to: LSWILPGLRQRSHRS*LRSCHRPLQSHLCG Trigger: GCCACAGAGGTGGCTCTGGAGGGGGCGGTGGCAGCTCCGGAGGCAGCTACGGTGGCTCCTCTGGCGGAGGCCGGGGAGGATCCAGCTCAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS GCA 90 bp | CGTAGCTGCCACCACTGCCTCCGCCTCCAGAACTGCCGCCGTAGCTaGCGCCTCCAGAGCCGCCGCCATAACTGCCACCGCCTCCGTATC | + |
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Preference number: 5 (lower is better) Translates to: RSCHHCLRLQNCRRS*RLQSRRHNCHRLRI Trigger: GATACGGAGGCGGTGGCAGTTATGGCGGCGGCTCTGGAGGCGGCAGCTACGGCGGCAGTTCTGGAGGCGGAGGCAGTGGTGGCAGCTACG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS CCA 90 bp | CCGCCGCTGCCGCCGCCTCGGCTACTGCTTCCGCTCATGCTGGTGTaGCTGGTGCTCACCGACACGCTCACGTTGGGAGTGCACTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: PPLPPPRLLLPLMLV*LVLTDTLTLGVHSP Trigger: TGGAGAGTGCACTCCCAACGTGAGCGTGTCGGTGAGCACCAGCCACACCAGCATGAGCGGAAGCAGTAGCCGAGGCGGCGGCAGCGGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS GCA 90 bp | TGCCGCCGCCTCGGCTACTGCTTCCGCTCATGCTGGTGTGGCTGGTaGTCACCGACACGCTCACGTTGGGAGTGCACTCTCCAGACATCC | + |
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Preference number: 5 (lower is better) Translates to: CRRLGYCFRSCWCGW*SPTRSRWECTLQTS Trigger: GGATGTCTGGAGAGTGCACTCCCAACGTGAGCGTGTCGGTGAGCACCAGCCACACCAGCATGAGCGGAAGCAGTAGCCGAGGCGGCGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS CCA 90 bp | CCACCTCCACCGCTGCGGCGCATAGAGCTGCTGGTGGATCTGCGCTaGAAGCTGACTAGGCCAGCAGAGCCTGAGCTGAAGTTCCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: PPPPLRRIELLVDLR*KLTRPAEPELKFLL Trigger: CAGCAGGAACTTCAGCTCAGGCTCTGCTGGCCTAGTCAGCTTCCAGCGCAGATCCACCAGCAGCTCTATGCGCCGCAGCGGTGGAGGTGG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CAA 90 bp | ATGTACAAAACCAAAGCAGCTCAGCGTGCTGCAGGATATGGGATGCTAAGGGGCCCTCCAGCCACACTCTaGGAGATGCTCCTACCGCCT | + |
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Preference number: 5 (lower is better) Translates to: MYKTKAAQRAAGYGMLRGPPATL*EMLLPP Trigger: AGGCGGTAGGAGCATCTCCAAGAGTGTGGCTGGAGG...GCCCCTTAGCATCCCATATCCTGCAGCACGCTGAGCTGCTTTGGTTTTGTACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CAA 90 bp | CCCAGTGCTCTGGGCATGCCAGGCAAGGAAGCCCTAGATCTGAAGTCCTCTTTGAGATCCAAACTGCGGTaGTTGTCCATGGACAGGACA | + |
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Preference number: 5 (lower is better) Translates to: PSALGMPGKEALDLKSSLRSKLR*LSMDRT Trigger: TGTCCTGTCCATGGACAACAACCGCAGTTTGGATCT...CAAAGAGGACTTCAGATCTAGGGCTTCCTTGCCTGGCATGCCCAGAGCACTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CAA 90 bp | TGCTCTGGGCATGCCAGGCAAGGAAGCCCTAGATCTGAAGTCCTCTTTGAAATGCTGAGACTTCACTTTTaGAATCTGAGGGTCAACCTC | + |
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Preference number: 5 (lower is better) Translates to: CSGHARQGSPRSEVLFEMLRLHF*NLRVNL Trigger: GAGGTTGACCCTCAGATTCAAAAAGTGAAGTCTCAG...CATTTCAAAGAGGACTTCAGATCTAGGGCTTCCTTGCCTGGCATGCCCAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CAA 90 bp | CAAAACCAAAGCAGCTCAGCGTGCTGCAGGATATGGGATGCTAAGGGGCAACCCATTGGTTTCGCTGATTaGAGTTTGCATCTGAGACAT | + |
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Preference number: 5 (lower is better) Translates to: QNQSSSACCRIWDAKGQPIGFAD*SLHLRH Trigger: ATGTCTCAGATGCAAACTCAAATCAGCGAAACCAAT...GGGTTGCCCCTTAGCATCCCATATCCTGCAGCACGCTGAGCTGCTTTGGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CAA 90 bp | GGTGATGAACTGATGGCAGTTCAGCAGAACATAAAGTGGGATTGTTACCATGGGACACTGTCTCCATGTTaGCCAGCAGTGATCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GDELMAVQQNIKWDCYHGTLSPC*PAVICS Trigger: GCTGCAGATCACTGCTGGCAAACATGGAGACAGTGT...CCCATGGTAACAATCCCACTTTATGTTCTGCTGAACTGCCATCAGTTCATCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CAA 90 bp | GGTGATGAACTGATGGCAGTTCAGCAGAACATAAAGTGGGATTGTTACCATGGGGAAGAAGTCAATGTCTaGCTGGAGGGCATCTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: GDELMAVQQNIKWDCYHGEEVNV*LEGICL Trigger: AAGGCAGATGCCCTCCAGCAAGACATTGACTTCTTC...CCCATGGTAACAATCCCACTTTATGTTCTGCTGAACTGCCATCAGTTCATCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CAA 90 bp | GGATTGATCTTGGTCTTGCCAGCCATGTTTGGCCTTGATGGAAAGGCAGAGCTACTGAGACATTTCCATTaGGTAGAGTGCAGAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: GLILVLPAMFGLDGKAELLRHFH*VECREE Trigger: TTCTTCTCTGCACTCTACCAAATGGAAATGTCTCAG...TAGCTCTGCCTTTCCATCAAGGCCAAACATGGCTGGCAAGACCAAGATCAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CAA 90 bp | GATGAACTGATGGCAGTTCAGCAGAACATAAAGTGGGATTGTTACCATGGGACTTTGTTCTGGGCATCTTaGAGTGCTTTCTCACCACGC | + |
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Preference number: 5 (lower is better) Translates to: DELMAVQQNIKWDCYHGTLFWAS*SAFSPR Trigger: GCGTGGTGAGAAAGCACTCAAAGATGCCCAGAACAA...AGTCCCATGGTAACAATCCCACTTTATGTTCTGCTGAACTGCCATCAGTTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CAA 90 bp | CATGCCAGGCAAGGAAGCCCTAGATCTGAAGTCCTCTTTGAAATGTCATGTTGGTCAGAAATCTCCATCTaGGTATTTCTCACACTGTCT | + |
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Preference number: 5 (lower is better) Translates to: HARQGSPRSEVLFEMSCWSEISI*VFLTLS Trigger: AGACAGTGTGAGAAATACCAAGATGGAGATTTCTGA...CCAACATGACATTTCAAAGAGGACTTCAGATCTAGGGCTTCCTTGCCTGGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CAA 90 bp | ACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGCGTGCTGCAGGATATTGGGAGATCTGCTTCTaGCAACCATCAATTTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: TRKHLMYKTKAAQRAAGYWEICF*QPSISD Trigger: ATCTGAAATTGATGGTTGCAAGAAGCAGATCTCCCA...ATATCCTGCAGCACGCTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CAA 90 bp | ATAAAAGACAAACTCGCAAACACCTTATGTACAAAACCAAAGCAGCTCAGCGTGGATGTTCTGCTGTATTaGGGAGATCTGCTTCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: IKDKLANTLCTKPKQLSVDVLLY*GDLLLA Trigger: TGCAAGAAGCAGATCTCCCAAATACAGCAGAACATC...CACGCTGAGCTGCTTTGGTTTTGTACATAAGGTGTTTGCGAGTTTGTCTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CAA 90 bp | AAAGAAAGCGCAGAGAAAATAAGCCTAATCTGTGCAATTAACCATAGCTCTTTTCGCTGCTCAGCATCATaGATGTTCTGCTGTATTTGG | + |
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Preference number: 5 (lower is better) Translates to: KESAEKISLICAINHSSFRCSAS*MFCCIW Trigger: CCAAATACAGCAGAACATCAATGATGCTGAGCAGCG...AAAAGAGCTATGGTTAATTGCACAGATTAGGCTTATTTTCTCTGCGCTTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS-3UTR CAA 90 bp | GAAAGCGCAGAGAAAATAAGCCTAATCTGTGCAATTAACCATAGCTCTTTTCTCTTCGCTGATTTGAGTTaGCATCTGAGACATTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: ESAEKISLICAINHSSFLFADLS*HLRHFH Trigger: ATGGAAATGTCTCAGATGCAAACTCAAATCAGCGAA...GAGAAAAGAGCTATGGTTAATTGCACAGATTAGGCTTATTTTCTCTGCGCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS GCA 72 bp | ATCCTCCCCGGCCTCCGCCAGAGGAGCCACCGTAGCTaGCTCCGGAGCTGCCACCGCCCCCTCCAGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: ILPGLRQRSHRS*LRSCHRPLQSH Trigger: GTGGCTCTGGAGGGGGCGGTGGCAGCTCCGGAGGCAGCTACGGTGGCTCCTCTGGCGGAGGCCGGGGAGGAT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS CCA 72 bp | CGCTGCCGCCGCCTCGGCTACTGCTTCCGCTCATGCTaGTGTGGCTGGTGCTCACCGACACGCTCACGTTGG | + |
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Preference number: 6 (lower is better) Translates to: RCRRLGYCFRSC*CGWCSPTRSRW Trigger: CCAACGTGAGCGTGTCGGTGAGCACCAGCCACACCAGCATGAGCGGAAGCAGTAGCCGAGGCGGCGGCAGCG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS CCA 72 bp | CCGCTGCGGCGCATAGAGCTGCTGGTGGATCTGCGCTaGAAGCTGACTAGGCCAGCAGAGCCTGAGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PLRRIELLVDLR*KLTRPAEPELK Trigger: CTTCAGCTCAGGCTCTGCTGGCCTAGTCAGCTTCCAGCGCAGATCCACCAGCAGCTCTATGCGCCGCAGCGG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS GCA 72 bp | CTCGGCTACTGCTTCCGCTCATGCTGGTGTGGCTGGTaGTCACCGACACGCTCACGTTGGGAGTGCACTCTC | + |
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Preference number: 6 (lower is better) Translates to: LGYCFRSCWCGW*SPTRSRWECTL Trigger: GAGAGTGCACTCCCAACGTGAGCGTGTCGGTGAGCACCAGCCACACCAGCATGAGCGGAAGCAGTAGCCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS CAA 72 bp | ATGCTGGTGTGGCTGGTGCTCACCGACACGCTCACGTaGGGAGTGCACTCTCCAGACATCCTGATCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: MLVWLVLTDTLT*GVHSPDILISS Trigger: AGAGGAGATCAGGATGTCTGGAGAGTGCACTCCCAACGTGAGCGTGTCGGTGAGCACCAGCCACACCAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS CCA 72 bp | TCTTGCATGTTCTTCAGCTCAGAATCCATCCGTGACTaGTCACTCTTCAGCGAGTCCACCTTCCTTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SCMFFSSESIRD*SLFSESTFLLR Trigger: CCTCAGAAGGAAGGTGGACTCGCTGAAGAGTGACCAGTCACGGATGGATTCTGAGCTGAAGAACATGCAAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS GCA 72 bp | AAGTCACGCAGCAATCTGGCAAGATCCTCCTTGCATTaGGACAATGCATCCTCTATCTCATTCAGCTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: KSRSNLARSSLH*DNASSISFSLF Trigger: GAACAAGCTGAATGAGATAGAGGATGCATTGTCGCAATGCAAGGAGGATCTTGCCAGATTGCTGCGTGACTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS CCA 72 bp | AGAAGAAGTCAATGTCTTGCTGGAGGGCATCTGCCTTaGCCTGAAGCTCAACTTTGGTCATGTAAGCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: RRSQCLAGGHLP*PEAQLWSCKLN Trigger: ATTCAGCTTACATGACCAAAGTTGAGCTTCAGGCCAAGGCAGATGCCCTCCAGCAAGACATTGACTTCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS CCA 72 bp | CCACGCTGCTCAGCATCATTGATGTTCTGCTGTATTTaGGAGATCTGCTTCTTGCAACCATCAATTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: PRCSASLMFCCI*EICFLQPSISD Trigger: ATCTGAAATTGATGGTTGCAAGAAGCAGATCTCCCAAATACAGCAGAACATCAATGATGCTGAGCAGCGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS GCA 72 bp | TCAGCATCATTGATGTTCTGCTGTATTTGGGAGATCTaGTTCTTGCAACCATCAATTTCAGATCGAAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SASLMFCCIWEI*FLQPSISDRSL Trigger: GAGACTTCGATCTGAAATTGATGGTTGCAAGAAGCAGATCTCCCAAATACAGCAGAACATCAATGATGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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| CDS CCA 72 bp | TGCTTCTTGCAACCATCAATTTCAGATCGAAGTCTCTaGATCATTCGATTCAGCTCAGAAATCTCCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: CFLQPSISDRSL*IIRFSSEISIL Trigger: CAAGATGGAGATTTCTGAGCTGAATCGAATGATCCAGAGACTTCGATCTGAAATTGATGGTTGCAAGAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023790.5 |
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