Pregenerated sensors for KRR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063334Ensembl transcript IDs: ENSMUST00000163048.8, ENSMUST00000174653.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGGGAGCAAAAGCGACTGCAGCTCTGCCAATCCCATGGTTCTTTaGTGCCACCTCTGTAGCAGCCTGGCTCACAGAAGCCAGGCTGGG | + |
|
Preference number: 1 (lower is better) Translates to: EGSKSDCSSANPMVL*CHLCSSLAHRSQAG Trigger: CCCAGCCTGGCTTCTGTGAGCCAGGCTGCTACAGAGGTGGCAGCAAAGAACCATGGGATTGGCAGAGCTGCAGTCGCTTTTGCTCCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR GCA 90 bp | GGAGTCTATGCCCTCCTCTGGCCTCAGTGGGAGAAGGGACCCACATaGTTACTGCAGGGTAAGATACCCATATACATTTTCCTGGTACCA | + |
|
Preference number: 1 (lower is better) Translates to: GVYALLWPQWEKGPT*LLQGKIPIYIFLVP Trigger: TGGTACCAGGAAAATGTATATGGGTATCTTACCCTGCAGTAAGCATGTGGGTCCCTTCTCCCACTGAGGCCAGAGGAGGGCATAGACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR GCA 90 bp | ATGCCCTCCTCTGGCCTCAGTGGGAGAAGGGACCCACATGCTTACTaGAGGGTAAGATACCCATATACATTTTCCTGGTACCATTTCCTC | + |
|
Preference number: 1 (lower is better) Translates to: MPSSGLSGRRDPHAY*RVRYPYTFSWYHFL Trigger: GAGGAAATGGTACCAGGAAAATGTATATGGGTATCTTACCCTGCAGTAAGCATGTGGGTCCCTTCTCCCACTGAGGCCAGAGGAGGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR GCA 90 bp | TCCAGAGGAAATTACCCAACGTGGCCATATAAGCAAGGAGCCACGTaGAGTGATTGCCCAAAAGATGACAAGTGTCTCAACAGTCTCTGC | + |
|
Preference number: 1 (lower is better) Translates to: SRGNYPTWPYKQGAT*SDCPKDDKCLNSLC Trigger: GCAGAGACTGTTGAGACACTTGTCATCTTTTGGGCAATCACTGCACGTGGCTCCTTGCTTATATGGCCACGTTGGGTAATTTCCTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CCA 90 bp | CCCTGTACTAACGGTCTTCTGCTTTCCAGAGGAAATTACCCAACGTaGCCATATAAGCAAGGAGCCACGTGCAGTGATTGCCCAAAAGAT | + |
|
Preference number: 1 (lower is better) Translates to: PCTNGLLLSRGNYPT*PYKQGATCSDCPKD Trigger: ATCTTTTGGGCAATCACTGCACGTGGCTCCTTGCTTATATGGCCACGTTGGGTAATTTCCTCTGGAAAGCAGAAGACCGTTAGTACAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR GCA 90 bp | CTCATGTTGATAATTCTAAATCCAATTGCCCTCAAGAATTCTTGCTaGTCTTGCAAAGCCCAGTGTCTGATATCCAGTCCCCACACTGTC | + |
|
Preference number: 1 (lower is better) Translates to: LMLIILNPIALKNSC*SCKAQCLISSPHTV Trigger: GACAGTGTGGGGACTGGATATCAGACACTGGGCTTTGCAAGAGCAGCAAGAATTCTTGAGGGCAATTGGATTTAGAATTATCAACATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR GCA 90 bp | ATACTCATGTTGATAATTCTAAATCCAATTGCCCTCAAGAATTCTTaGTGCTCTTGCAAAGCCCAGTGTCTGATATCCAGTCCCCACACT | + |
|
Preference number: 1 (lower is better) Translates to: ILMLIILNPIALKNS*CSCKAQCLISSPHT Trigger: AGTGTGGGGACTGGATATCAGACACTGGGCTTTGCAAGAGCAGCAAGAATTCTTGAGGGCAATTGGATTTAGAATTATCAACATGAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CCA 90 bp | ACAGATATTCCTAAAACAGCTAGGCAAAACTTGCCTGGAACCAGTTaGGCACAATGTACACGTAGGCATCTACCTCCTACGTATTTATAT | + |
|
Preference number: 1 (lower is better) Translates to: TDIPKTARQNLPGTS*AQCTRRHLPPTYLY Trigger: ATATAAATACGTAGGAGGTAGATGCCTACGTGTACATTGTGCCCAACTGGTTCCAGGCAAGTTTTGCCTAGCTGTTTTAGGAATATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CCA 90 bp | ACTCTTCTTCGTTTCACAGGTTACTACTCTGTCGATTATCCAGACTaGCCTATATACCTGCGTAACAGATACACATCTCTCTTTCTCATT | + |
|
Preference number: 1 (lower is better) Translates to: TLLRFTGYYSVDYPD*PIYLRNRYTSLFLI Trigger: AATGAGAAAGAGAGATGTGTATCTGTTACGCAGGTATATAGGCCAGTCTGGATAATCGACAGAGTAGTAACCTGTGAAACGAAGAAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR TCA 90 bp | TTATATTTACAGAGCATACGGCCACAAACAGAAGGAAACTGGTCATaGTTTCCTGAGTCTGACTCAGCTAAAACCTTCGCATCTCAAAAT | + |
|
Preference number: 1 (lower is better) Translates to: LYLQSIRPQTEGNWS*FPESDSAKTFASQN Trigger: ATTTTGAGATGCGAAGGTTTTAGCTGAGTCAGACTCAGGAAATCATGACCAGTTTCCTTCTGTTTGTGGCCGTATGCTCTGTAAATATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCCTCCTCTGGCCTCAGTGGGAGAAGGGACCCACATGCTTACTGCAGGGTATTGCCTGGAACCAGTTaGGCACAATGTACACGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: MPSSGLSGRRDPHAYCRVLPGTS*AQCTRR Trigger: CCTACGTGTACATTGTGCCCAACTGGTTCCAGGCAA...TACCCTGCAGTAAGCATGTGGGTCCCTTCTCCCACTGAGGCCAGAGGAGGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCAAGAATTCTTGCTGCTCTTGCAAAGCCCAGTGTCTGATATCCAGTCCCCACCTCCTCTGGCCTCAGTaGGAGAAGGGACCCACATGC | + |
|
Preference number: 2 (lower is better) Translates to: LKNSCCSCKAQCLISSPHLLWPQ*EKGPTC Trigger: GCATGTGGGTCCCTTCTCCCACTGAGGCCAGAGGAG...GTGGGGACTGGATATCAGACACTGGGCTTTGCAAGAGCAGCAAGAATTCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR-3UTR TCA 90 bp | TCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCGATTTTTCCACAGTGTaGAGGGAGCAAAAGCGACTG | + |
|
Preference number: 2 (lower is better) Translates to: SLCRPGWPRTQKSTCLCLDFSTV*REQKRL Trigger: CAGTCGCTTTTGCTCCCTTCACACTGTGGAAAAATC...GAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR-3UTR TCA 90 bp | TCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCATTACGAATACAGACTaGCCAGGTTGCCATAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SLCRPGWPRTQKSTCLCLITNTD*PGCHSK Trigger: CTTGCTATGGCAACCTGGTCAGTCTGTATTCGTAAT...GAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTTGAGCTGGCCGTGGTAAGACCCAGAAGCCAGCTCAACATACTAGGCACAGGTGTCCTGCTGGGTTaGATGAGAAACTGCTACCTC | + |
|
Preference number: 2 (lower is better) Translates to: CFELAVVRPRSQLNILGTGVLLG*MRNCYL Trigger: GAGGTAGCAGTTTCTCATCCAACCCAGCAGGACACC...TGTGCCTAGTATGTTGAGCTGGCTTCTGGGTCTTACCACGGCCAGCTCAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTCTGCTTTCCAGAGGAAATTACCCAACGTGGCCATATAAGCAAGGAGCCATCACAGAAGCCAGGCTaGGTAGGGCTGCTTAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VFCFPEEITQRGHISKEPSQKPG*VGLLRR Trigger: CCTTCTAAGCAGCCCTACCCAGCCTGGCTTCTGTGA...TGGCTCCTTGCTTATATGGCCACGTTGGGTAATTTCCTCTGGAAAGCAGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR-3UTR GCA 90 bp | CACCTTAGGCCATCCCCTTGGGGACCTTTGCTCATATTCTGTGTCTTCCCTCTTCTCAAGAATTCTTGCTaGTCTTGCAAAGCCCAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: HLRPSPWGPLLIFCVFPLLKNSC*SCKAQC Trigger: ACACTGGGCTTTGCAAGAGCAGCAAGAATTCTTGAG...AAGAGGGAAGACACAGAATATGAGCAAAGGTCCCCAAGGGGATGGCCTAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGTTTTACAGTTAACCCACGACGAGACCAGGTCTCACGTATGTATGCAAACGAAGGAAACTGGTCATaGTTTCCTGAGTCTGACTCA | + |
|
Preference number: 2 (lower is better) Translates to: SGFTVNPRRDQVSRMYANEGNWS*FPESDS Trigger: TGAGTCAGACTCAGGAAATCATGACCAGTTTCCTTC...GTTTGCATACATACGTGAGACCTGGTCTCGTCGTGGGTTAACTGTAAAACCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCTTAGGCCATCCCCTTGGGGACCTTTGCTCATATTCTGTGTCTTCCCTCTTATGAAGACCAACCAATaGCAACAAACATTGGATTTG | + |
|
Preference number: 2 (lower is better) Translates to: HLRPSPWGPLLIFCVFPLMKTNQ*QQTLDL Trigger: CAAATCCAATGTTTGTTGCCATTGGTTGGTCTTCAT...AAGAGGGAAGACACAGAATATGAGCAAAGGTCCCCAAGGGGATGGCCTAAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTCTGCTTTCCAGAGGAAATTACCCAACGTGGCCATATAAGCAAGGAGCCACCATATACATTTTCCTaGTACCATTTCCTCACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: VFCFPEEITQRGHISKEPPYTFS*YHFLTQ Trigger: CTGAGTGAGGAAATGGTACCAGGAAAATGTATATGG...TGGCTCCTTGCTTATATGGCCACGTTGGGTAATTTCCTCTGGAAAGCAGAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CAA 90 bp | CCGCCCCCTCACAGGGTTTCTAGAACAAATTCAAAACTATTCTGCTaGATTCGGCAGAGCACAGTAAAGTCTCTCTGTCTTAAGGAAATT | + |
|
Preference number: 2 (lower is better) Translates to: PPPHRVSRTNSKLFC*IRQSTVKSLCLKEI Trigger: AATTTCCTTAAGACAGAGAGACTTTACTGTGCTCTGCCGAATCAAGCAGAATAGTTTTGAATTTGTTCTAGAAACCCTGTGAGGGGGCGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CAA 90 bp | AATACTCATGTTGATAATTCTAAATCCAATTGCCCTCAAGAATTCTaGCTGCTCTTGCAAAGCCCAGTGTCTGATATCCAGTCCCCACAC | + |
|
Preference number: 2 (lower is better) Translates to: NTHVDNSKSNCPQEF*LLLQSPVSDIQSPH Trigger: GTGTGGGGACTGGATATCAGACACTGGGCTTTGCAAGAGCAGCAAGAATTCTTGAGGGCAATTGGATTTAGAATTATCAACATGAGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CAA 90 bp | CGCACGCCCAGGAAATCTCAGATTTCCAGATCTGTAATACTCATGTaGATAATTCTAAATCCAATTGCCCTCAAGAATTCTTGCTGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: RTPRKSQISRSVILM*IILNPIALKNSCCS Trigger: AGAGCAGCAAGAATTCTTGAGGGCAATTGGATTTAGAATTATCAACATGAGTATTACAGATCTGGAAATCTGAGATTTCCTGGGCGTGCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CAA 90 bp | ATTCCTTTCGTACAGGGTGAATGTTATTTCAGTTTTTCCTGTTTCTaGAGAGTTGTTTGTGTCCTAATATGTGGTCAGTTTCAGTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: IPFVQGECYFSFSCF*RVVCVLICGQFQCV Trigger: CACACACTGAAACTGACCACATATTAGGACACAAACAACTCTCAAGAAACAGGAAAAACTGAAATAACATTCACCCTGTACGAAAGGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CAA 90 bp | TTCCGTGTGGGAATACTCTACATGTTTCACGTGTTGGCTTATTTTTaGTTGCTATTGTTATTCCTTTCGTACAGGGTGAATGTTATTTCA | + |
|
Preference number: 2 (lower is better) Translates to: FRVGILYMFHVLAYF*LLLLFLSYRVNVIS Trigger: TGAAATAACATTCACCCTGTACGAAAGGAATAACAATAGCAACAAAAAATAAGCCAACACGTGAAACATGTAGAGTATTCCCACACGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR TCA 72 bp | CAGGGCTCTCAGAACAGGGGAGTTAAGCTTCGGCCCTaGGTGTGCCCAGTGTTCTTTGGGCACTGCCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: QGSQNRGVKLRP*VCPVFFGHCHL Trigger: AAGGTGGCAGTGCCCAAAGAACACTGGGCACACTCAGGGCCGAAGCTTAACTCCCCTGTTCTGAGAGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR GCA 72 bp | GGCACTGCCACCTTAGGCCATCCCCTTGGGGACCTTTaGTCATATTCTGTGTCTTCCCTCTTTCCCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GTATLGHPLGDL*SYSVSSLFPRL Trigger: GAGCCTGGGAAAGAGGGAAGACACAGAATATGAGCAAAGGTCCCCAAGGGGATGGCCTAAGGTGGCAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CCA 72 bp | AAGGGAGCAAAAGCGACTGCAGCTCTGCCAATCCCATaGTTCTTTGCTGCCACCTCTGTAGCAGCCTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KGAKATAALPIP*FFAATSVAAWL Trigger: GAGCCAGGCTGCTACAGAGGTGGCAGCAAAGAACCATGGGATTGGCAGAGCTGCAGTCGCTTTTGCTCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR GCA 72 bp | AAAAGCGACTGCAGCTCTGCCAATCCCATGGTTCTTTaGTGCCACCTCTGTAGCAGCCTGGCTCACAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: KSDCSSANPMVL*CHLCSSLAHRS Trigger: GCTTCTGTGAGCCAGGCTGCTACAGAGGTGGCAGCAAAGAACCATGGGATTGGCAGAGCTGCAGTCGCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CCA 72 bp | TTCCCGGGGCACTATGCAGGCTGGGTTAGCACAGCATaGGAAACTGAGTCCACTCTTCTTCGTTTCACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: FPGHYAGWVSTA*ETESTLLRFTG Trigger: ACCTGTGAAACGAAGAAGAGTGGACTCAGTTTCCCATGCTGTGCTAACCCAGCCTGCATAGTGCCCCGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR TCA 72 bp | AGGGGGAGACATCATCTGATAAGCCAGATACCCGGCTaGGACTTTGGTGTCCTGCTGGGTTGGATGAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RGRHHLISQIPG*DFGVLLGWMRN Trigger: GTTTCTCATCCAACCCAGCAGGACACCAAAGTCTCAGCCGGGTATCTGGCTTATCAGATGATGTCTCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTCTGCTTTCCAGAGGAAATTACCCAACGTGGCCATATAAGCAAGGAGCCATACCCGGCTGAGACTTaGGTGTCCTGCTGGGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VFCFPEEITQRGHISKEPYPAET*VSCWVG Trigger: TCCAACCCAGCAGGACACCAAAGTCTCAGCCGGGTA...TGGCTCCTTGCTTATATGGCCACGTTGGGTAATTTCCTCTGGAAAGCAGAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCATCTCTCTTTCTCATaGCTAAGTCGGTTCTCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: SLCRPGWPRTQKSTCLCLHLSFS*LSRFSY Trigger: ATAGGAGAACCGACTTAGCAATGAGAAAGAGAGATG...GAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTAGGCCATCCCCTTGGGGACCTTTGCTCATATTCTGTGTCTTCCCTCTTCAGCCCAGGTCTTCCTaGTTTCATGTTTGCCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: HLRPSPWGPLLIFCVFPLQPRSS*FHVCPK Trigger: TTTGGGGCAAACATGAAACAAGGAAGACCTGGGCTG...AAGAGGGAAGACACAGAATATGAGCAAAGGTCCCCAAGGGGATGGCCTAAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR GCA 72 bp | CTGATTTTTCCACAGTGTGAAGGGAGCAAAAGCGACTaGAGCTCTGCCAATCCCATGGTTCTTTGCTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LIFPQCEGSKSD*SSANPMVLCCH Trigger: GTGGCAGCAAAGAACCATGGGATTGGCAGAGCTGCAGTCGCTTTTGCTCCCTTCACACTGTGGAAAAATCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR TCA 72 bp | CAGACTGCCCTTAAGAAGTCTGATTTTTCCACAGTGTaGAGGGAGCAAAAGCGACTGCAGCTCTGCCAATCC | + |
|
Preference number: 3 (lower is better) Translates to: QTALKKSDFSTV*REQKRLQLCQS Trigger: GGATTGGCAGAGCTGCAGTCGCTTTTGCTCCCTTCACACTGTGGAAAAATCAGACTTCTTAAGGGCAGTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR GCA 72 bp | ACGTGGCCATATAAGCAAGGAGCCACGTGCAGTGATTaGCCAAAAGATGACAAGTGTCTCAACAGTCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TWPYKQGATCSD*PKDDKCLNSLC Trigger: GCAGAGACTGTTGAGACACTTGTCATCTTTTGGGCAATCACTGCACGTGGCTCCTTGCTTATATGGCCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CCA 72 bp | CCTAAAACAGCTAGGCAAAACTTGCCTGGAACCAGTTaGGCACAATGTACACGTAGGCATCTACCTCCTACG | + |
|
Preference number: 3 (lower is better) Translates to: PKTARQNLPGTS*AQCTRRHLPPT Trigger: CGTAGGAGGTAGATGCCTACGTGTACATTGTGCCCAACTGGTTCCAGGCAAGTTTTGCCTAGCTGTTTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CCA 72 bp | ACATCATCTGATAAGCCAGATACCCGGCTGAGACTTTaGTGTCCTGCTGGGTTGGATGAGAAACTGCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: TSSDKPDTRLRL*CPAGLDEKLLP Trigger: AGGTAGCAGTTTCTCATCCAACCCAGCAGGACACCAAAGTCTCAGCCGGGTATCTGGCTTATCAGATGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CCA 72 bp | AACGGTCTTCTGCTTTCCAGAGGAAATTACCCAACGTaGCCATATAAGCAAGGAGCCACGTGCAGTGATTGC | + |
|
Preference number: 3 (lower is better) Translates to: NGLLLSRGNYPT*PYKQGATCSDC Trigger: GCAATCACTGCACGTGGCTCCTTGCTTATATGGCCACGTTGGGTAATTTCCTCTGGAAAGCAGAAGACCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCGCTGCTTATGGAGTGTaGTGCTTTTTAACAATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLCRPGWPRTQKSTCLCLAAYGV*CFLTMK Trigger: TTTCATTGTTAAAAAGCACAACACTCCATAAGCAGC...GAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR TCA 72 bp | TCAAGAATTCTTGCTGCTCTTGCAAAGCCCAGTGTCTaGTATCCAGTCCCCACACTGTCTCACTACCACCTA | + |
|
Preference number: 3 (lower is better) Translates to: SRILAALAKPSV*YPVPTLSHYHL Trigger: TAGGTGGTAGTGAGACAGTGTGGGGACTGGATATCAGACACTGGGCTTTGCAAGAGCAGCAAGAATTCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR GCA 72 bp | AGAAGCCAGCTCAACATACTAGGCACAAAGAAAGGATaGATGGGCAGAAGTTTGGAGCTAATGCTCCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: RSQLNILGTKKG*MGRSLELMLQT Trigger: GGTCTGGAGCATTAGCTCCAAACTTCTGCCCATGCATCCTTTCTTTGTGCCTAGTATGTTGAGCTGGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR TCA 72 bp | CAGAGCATACGGCCACAAACAGAAGGAAACTGGTCATaGTTTCCTGAGTCTGACTCAGCTAAAACCTTCGCA | + |
|
Preference number: 3 (lower is better) Translates to: QSIRPQTEGNWS*FPESDSAKTFA Trigger: TGCGAAGGTTTTAGCTGAGTCAGACTCAGGAAATCATGACCAGTTTCCTTCTGTTTGTGGCCGTATGCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR GCA 72 bp | CTAAATCCAATTGCCCTCAAGAATTCTTGCTGCTCTTaGAAAGCCCAGTGTCTGATATCCAGTCCCCACACT | + |
|
Preference number: 3 (lower is better) Translates to: LNPIALKNSCCS*KAQCLISSPHT Trigger: AGTGTGGGGACTGGATATCAGACACTGGGCTTTGCAAGAGCAGCAAGAATTCTTGAGGGCAATTGGATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR GCA 72 bp | AATTACCCAACGTGGCCATATAAGCAAGGAGCCACGTaGAGTGATTGCCCAAAAGATGACAAGTGTCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: NYPTWPYKQGAT*SDCPKDDKCLN Trigger: GTTGAGACACTTGTCATCTTTTGGGCAATCACTGCACGTGGCTCCTTGCTTATATGGCCACGTTGGGTAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CCA 72 bp | CGTTTCACAGGTTACTACTCTGTCGATTATCCAGACTaGCCTATATACCTGCGTAACAGATACACATCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RFTGYYSVDYPD*PIYLRNRYTSL Trigger: GAGAGATGTGTATCTGTTACGCAGGTATATAGGCCAGTCTGGATAATCGACAGAGTAGTAACCTGTGAAACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR GCA 72 bp | ATAATTCTAAATCCAATTGCCCTCAAGAATTCTTGCTaGTCTTGCAAAGCCCAGTGTCTGATATCCAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: IILNPIALKNSC*SCKAQCLISSP Trigger: GGGACTGGATATCAGACACTGGGCTTTGCAAGAGCAGCAAGAATTCTTGAGGGCAATTGGATTTAGAATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAGTCCACTCTTCTTCGTTTCACAGGTTACTACTCTGTCGATTATCCAGACCAATGGCAACAAACATaGGATTTGATGACTCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: TESTLLRFTGYYSVDYPDQWQQT*DLMTHS Trigger: GGAATGAGTCATCAAATCCAATGTTTGTTGCCATTG...GTCTGGATAATCGACAGAGTAGTAACCTGTGAAACGAAGAAGAGTGGACTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR GCA 72 bp | CCTCACAGGGTTTCTAGAACAAATTCAAAACTATTCTaGTTGATTCGGCAGAGCACAGTAAAGTCTCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PHRVSRTNSKLF*LIRQSTVKSLC Trigger: ACAGAGAGACTTTACTGTGCTCTGCCGAATCAAGCAGAATAGTTTTGAATTTGTTCTAGAAACCCTGTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CCA 72 bp | AAACCAAATGTTCTGAGTATTATGAAGACCAACCAATaGCAACAAACATTGGATTTGATGACTCATTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: KPNVLSIMKTNQ*QQTLDLMTHSK Trigger: TTTGGAATGAGTCATCAAATCCAATGTTTGTTGCCATTGGTTGGTCTTCATAATACTCAGAACATTTGGTTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CAA 72 bp | GAGTTAAGCTTCGGCCCTGAGTGTGCCCAGTGTTCTTaGGGCACTGCCACCTTAGGCCATCCCCTTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ELSFGPECAQCS*GTATLGHPLGD Trigger: GTCCCCAAGGGGATGGCCTAAGGTGGCAGTGCCCAAAGAACACTGGGCACACTCAGGGCCGAAGCTTAACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR CCA 90 bp | TCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCATCAATCTGACTCTCTaGCTGTGGGGGCGGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLCRPGWPRTQKSTCLCLINLTL*LWGREG Trigger: CCCTTCCCGCCCCCACAGCCAGAGAGTCAGATTGAT...GAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CAA 72 bp | GGGCACTGCCACCTTAGGCCATCCCCTTGGGGACCTTaGCTCATATTCTGTGTCTTCCCTCTTTCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHCHLRPSPWGP*LIFCVFPLSQA Trigger: AGCCTGGGAAAGAGGGAAGACACAGAATATGAGCAAAGGTCCCCAAGGGGATGGCCTAAGGTGGCAGTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGTCTATGCCCTCCTCTGGCCTCAGTGGGAGAAGGGACCCACATGCTTACTCACGCAACATCATCCTaGAGTATCCGTACTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WSLCPPLASVGEGTHMLTHATSS*SIRTAC Trigger: ACAGGCAGTACGGATACTTCAGGATGATGTTGCGTG...AGTAAGCATGTGGGTCCCTTCTCCCACTGAGGCCAGAGGAGGGCATAGACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCCTCCTCTGGCCTCAGTGGGAGAAGGGACCCACATGCTTACTGCAGGGTACTTTGGCTTCACAGCTaGCTTTTCCTTAGGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: MPSSGLSGRRDPHAYCRVLWLHS*LFLRWN Trigger: ATTCCACCTAAGGAAAAGCCAGCTGTGAAGCCAAAG...TACCCTGCAGTAAGCATGTGGGTCCCTTCTCCCACTGAGGCCAGAGGAGGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGTCTATGCCCTCCTCTGGCCTCAGTGGGAGAAGGGACCCACATGCTTACTCAAAGGAAACGCTCCTaGCCAAGAGCTTTATTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WSLCPPLASVGEGTHMLTQRKRS*PRALLG Trigger: ACCTAATAAAGCTCTTGGCCAGGAGCGTTTCCTTTG...AGTAAGCATGTGGGTCCCTTCTCCCACTGAGGCCAGAGGAGGGCATAGACTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CAA 72 bp | ATACTAGGCACAAAGAAAGGATGCATGGGCAGAAGTTaGGAGCTAATGCTCCAGACCTGGGGGTCTTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILGTKKGCMGRS*ELMLQTWGSCV Trigger: GACACAAGACCCCCAGGTCTGGAGCATTAGCTCCAAACTTCTGCCCATGCATCCTTTCTTTGTGCCTAGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGTTTTACAGTTAACCCACGACGAGACCAGGTCTCACGTATGTATGCAAACGCGTGTACTCCTTCTTaGCACTCTTCTTCTTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGFTVNPRRDQVSRMYANACTPS*HSSSSV Trigger: AACCGAAGAAGAAGAGTGTCAAGAAGGAGTACACGC...GTTTGCATACATACGTGAGACCTGGTCTCGTCGTGGGTTAACTGTAAAACCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGTTTTACAGTTAACCCACGACGAGACCAGGTCTCACGTATGTATGCAAACAATTCTTTATCAATCTaGCTCTCTGGCTGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGFTVNPRRDQVSRMYANNSLSI*LSGCGG Trigger: GCCCCCACAGCCAGAGAGTCAGATTGATAAAGAATT...GTTTGCATACATACGTGAGACCTGGTCTCGTCGTGGGTTAACTGTAAAACCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR CCA 90 bp | CACCTTAGGCCATCCCCTTGGGGACCTTTGCTCATATTCTGTGTCTTCCCTCTTTGGCTTTTCCTTAGGTaGAATAAACGCTTTGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HLRPSPWGPLLIFCVFPLWLFLR*NKRFVS Trigger: CGAAACAAAGCGTTTATTCCACCTAAGGAAAAGCCA...AAGAGGGAAGACACAGAATATGAGCAAAGGTCCCCAAGGGGATGGCCTAAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CAA 72 bp | TCTAAATCCAATTGCCCTCAAGAATTCTTGCTGCTCTaGCAAAGCCCAGTGTCTGATATCCAGTCCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SKSNCPQEFLLL*QSPVSDIQSPH Trigger: GTGTGGGGACTGGATATCAGACACTGGGCTTTGCAAGAGCAGCAAGAATTCTTGAGGGCAATTGGATTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGTTTTACAGTTAACCCACGACGAGACCAGGTCTCACGTATGTATGCAAACAGCGTTGCTTTAACATaGTGCTCATTCAAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGFTVNPRRDQVSRMYANSVALT*CSFKAF Trigger: GAAGGCCTTGAATGAGCATCATGTTAAAGCAACGCT...GTTTGCATACATACGTGAGACCTGGTCTCGTCGTGGGTTAACTGTAAAACCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR GCA 90 bp | AACGGTGTATCTAGTAAAATCCACGATGGCCTGGTACACAGAAAACACCTACAATTTCGGGAACAAGGTTaGGAAGCTGCTCTCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NGVSSKIHDGLVHRKHLQFREQG*EAALLQ Trigger: TTGGAGGAGAGCAGCTTCGCAACCTTGTTCCCGAAA...TTGTAGGTGTTTTCTGTGTACCAGGCCATCGTGGATTTTACTAGATACACCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTCTGCTTTCCAGAGGAAATTACCCAACGTGGCCATATAAGCAAGGAGCCATTGTACAAACAGTCATaGTACCCTCGATCAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFCFPEEITQRGHISKEPLYKQS*YPRSSP Trigger: TGGACTTGATCGAGGGTAGCATGACTGTTTGTACAA...TGGCTCCTTGCTTATATGGCCACGTTGGGTAATTTCCTCTGGAAAGCAGAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTCTGCTTTCCAGAGGAAATTACCCAACGTGGCCATATAAGCAAGGAGCCAGTAAGAGCTTCTGCTTaGTTAGCCTTTATTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFCFPEEITQRGHISKEPVRASA*LAFIAS Trigger: GGAAGCAATAAAGGCTAAGCAAGCAGAAGCTCTTAC...TGGCTCCTTGCTTATATGGCCACGTTGGGTAATTTCCTCTGGAAAGCAGAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR GCA 90 bp | CTCAAGAATTCTTGCTGCTCTTGCAAAGCCCAGTGTCTGATATCCAGTCCCCACCTTTGTAAGAGCTTCTaGTTGCTTAGCCTTTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKNSCCSCKAQCLISSPHLCKSF*LLSLYC Trigger: GCAATAAAGGCTAAGCAAGCAGAAGCTCTTACAAAG...GTGGGGACTGGATATCAGACACTGGGCTTTGCAAGAGCAGCAAGAATTCTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR TCA 90 bp | AACGGTGTATCTAGTAAAATCCACGATGGCCTGGTACACAGAAAACACCTACAATTCTGCCGCTTCTTCTaGCTCGCCTTCAAAAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NGVSSKIHDGLVHRKHLQFCRFF*LAFKKY Trigger: ATACTTTTTGAAGGCGAGTCAGAAGAAGCGGCAGAA...TTGTAGGTGTTTTCTGTGTACCAGGCCATCGTGGATTTTACTAGATACACCGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTCTGCTTTCCAGAGGAAATTACCCAACGTGGCCATATAAGCAAGGAGCCATTTGTGCTTGAACTGTaGCAAAAATCTTTCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: VFCFPEEITQRGHISKEPFVLEL*QKSFPT Trigger: AGTTGGGAAAGATTTTTGCCACAGTTCAAGCACAAA...TGGCTCCTTGCTTATATGGCCACGTTGGGTAATTTCCTCTGGAAAGCAGAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CAA 72 bp | CTTAAGGAAATTCACCCAAACCAGCCCAGGTCTTCCTaGTTTCATGTTTGCCCCAAAACAAATCTACCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LKEIHPNQPRSS*FHVCPKTNLPI Trigger: AATTGGTAGATTTGTTTTGGGGCAAACATGAAACAAGGAAGACCTGGGCTGGTTTGGGTGAATTTCCTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| 3UTR CAA 72 bp | CACAGGGTTTCTAGAACAAATTCAAAACTATTCTGCTaGATTCGGCAGAGCACAGTAAAGTCTCTCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HRVSRTNSKLFC*IRQSTVKSLCL Trigger: AAGACAGAGAGACTTTACTGTGCTCTGCCGAATCAAGCAGAATAGTTTTGAATTTGTTCTAGAAACCCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR CAA 90 bp | ATGCCCTCCTCTGGCCTCAGTGGGAGAAGGGACCCACATGCTTACTGCAGGGTATTCAAGGTGGATCCTTaGGGACCAATAAGCCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: MPSSGLSGRRDPHAYCRVFKVDP*GPISRC Trigger: ACAGCGGCTTATTGGTCCCAAAGGATCCACCTTGAA...TACCCTGCAGTAAGCATGTGGGTCCCTTCTCCCACTGAGGCCAGAGGAGGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS TCA 90 bp | GACTACTTTTCGAACCTCTTTGAGGCCACTGAAAGGTCCGATGGCTaGGACCGTGTTCCCCTGAACCATGACGTAGCAGTTTGTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DYFSNLFEATERSDG*DRVPLNHDVAVCQE Trigger: CTCCTGACAAACTGCTACGTCATGGTTCAGGGGAACACGGTCTCAGCCATCGGACCTTTCAGTGGCCTCAAAGAGGTTCGAAAAGTAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163048.8 ENSMUST00000174653.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGTCTATGCCCTCCTCTGGCCTCAGTGGGAGAAGGGACCCACATGCTTACTTGTAAGAGCTTCTGCTaGCTTAGCCTTTATTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WSLCPPLASVGEGTHMLTCKSFC*LSLYCF Trigger: GAAGCAATAAAGGCTAAGCAAGCAGAAGCTCTTACA...AGTAAGCATGTGGGTCCCTTCTCCCACTGAGGCCAGAGGAGGGCATAGACTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGTTTTACAGTTAACCCACGACGAGACCAGGTCTCACGTATGTATGCAAACATTTCGGGAACAAGGTaGCGAAGCTGCTCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGFTVNPRRDQVSRMYANISGTR*RSCSPP Trigger: TGGAGGAGAGCAGCTTCGCAACCTTGTTCCCGAAAT...GTTTGCATACATACGTGAGACCTGGTCTCGTCGTGGGTTAACTGTAAAACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTTGAGCTGGCCGTGGTAAGACCCAGAAGCCAGCTCAACATACTAGGCACACAAACGTCTTCTTTGTaGTACAAACAGTCATGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: CFELAVVRPRSQLNILGTQTSSL*YKQSCY Trigger: GTAGCATGACTGTTTGTACAACAAAGAAGACGTTTG...TGTGCCTAGTATGTTGAGCTGGCTTCTGGGTCTTACCACGGCCAGCTCAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTTGAGCTGGCCGTGGTAAGACCCAGAAGCCAGCTCAACATACTAGGCACATTCTTAACCTTTTCCTaGATAGCAGCCACATCAATC | + |
|
Preference number: 5 (lower is better) Translates to: CFELAVVRPRSQLNILGTFLTFS*IAATSI Trigger: GATTGATGTGGCTGCTATCAAGGAAAAGGTTAAGAA...TGTGCCTAGTATGTTGAGCTGGCTTCTGGGTCTTACCACGGCCAGCTCAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS TCA 72 bp | AAGGTCCGATGGCTGAGACCGTGTTCCCCTGAACCATaGCGTAGCAGTTTGTCAGGAGCTCCAGTGCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KVRWLRPCSPEP*RSSLSGAPVPS Trigger: TGAAGGCACTGGAGCTCCTGACAAACTGCTACGTCATGGTTCAGGGGAACACGGTCTCAGCCATCGGACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163048.8 ENSMUST00000174653.2 |
||
| CDS CAA 72 bp | CTCACGCTTCTGTTTCTGCGGCTGAGAGTCACGTTTTaGAGCTTCTTTGGCAGGCGCCTCCGCAGAAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LTLLFLRLRVTF*SFFGRRLRRSC Trigger: GCAACTTCTGCGGAGGCGCCTGCCAAAGAAGCTCAAAAACGTGACTCTCAGCCGCAGAAACAGAAGCGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163048.8 ENSMUST00000174653.2 |
||
| CDS TCA 72 bp | TCGAACCTCTTTGAGGCCACTGAAAGGTCCGATGGCTaGGACCGTGTTCCCCTGAACCATGACGTAGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SNLFEATERSDG*DRVPLNHDVAV Trigger: AACTGCTACGTCATGGTTCAGGGGAACACGGTCTCAGCCATCGGACCTTTCAGTGGCCTCAAAGAGGTTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163048.8 ENSMUST00000174653.2 |
||
| CDS TCA 72 bp | ATGCTACCCTCGATCAAGTCCAGCGTTGCTTTAACATaGTGCTCATTCAAGGCCTTCTGCACCAGCGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: MLPSIKSSVALT*CSFKAFCTSGQ Trigger: CTGGCCGCTGGTGCAGAAGGCCTTGAATGAGCATCATGTTAAAGCAACGCTGGACTTGATCGAGGGTAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163048.8 ENSMUST00000174653.2 |
||
| CDS CCA 72 bp | ACTGGCCAATTCTTTATCAATCTGACTCTCTGGCTGTaGGGGCGGGAAGGGCGTGTACTCCTTCTTGACACT | + |
|
Preference number: 6 (lower is better) Translates to: TGQFFINLTLWL*GREGRVLLLDT Trigger: AGTGTCAAGAAGGAGTACACGCCCTTCCCGCCCCCACAGCCAGAGAGTCAGATTGATAAAGAATTGGCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163048.8 |
||
| CDS CAA 90 bp | TCCTTTGGCTTCACAGCTGGCTTTTCCTTAGGTGGAATAAACGCTTaGTTTCGTTCTTCCTGCCTCTTTGTAAGAGCTTCTGCTTGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SFGFTAGFSLGGINA*FRSSCLFVRASACL Trigger: TAAGCAAGCAGAAGCTCTTACAAAGAGGCAGGAAGAACGAAACAAAGCGTTTATTCCACCTAAGGAAAAGCCAGCTGTGAAGCCAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163048.8 ENSMUST00000174653.2 |
||
| CDS CAA 72 bp | TTCACAGCTGGCTTTTCCTTAGGTGGAATAAACGCTTaGTTTCGTTCTTCCTGCCTCTTTGTAAGAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FTAGFSLGGINA*FRSSCLFVRAS Trigger: AGAAGCTCTTACAAAGAGGCAGGAAGAACGAAACAAAGCGTTTATTCCACCTAAGGAAAAGCCAGCTGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163048.8 ENSMUST00000174653.2 |
||