Pregenerated sensors for KRIT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000600Ensembl transcript IDs: ENSMUST00000080085.9, ENSMUST00000171023.8, ENSMUST00000198079.2, ENSMUST00000200386.5, ENSMUST00000200577.5
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCCGTACGTAGGGATCTCCCAGCAGTTCTGTAGGAACATGCGCTaGAGGTGGTGCATTTCCTTACTGACGCCCTCACTCAGACTCAGA | + |
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Preference number: 1 (lower is better) Translates to: APYVGISQQFCRNMR*RWCISLLTPSLRLR Trigger: TCTGAGTCTGAGTGAGGGCGTCAGTAAGGAAATGCACCACCTGCAGCGCATGTTCCTACAGAACTGCTGGGAGATCCCTACGTACGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR TCA 90 bp | AGGAGGATCTGCACTATTTCAGCATGGCCGCCTCCAGCAGCAAAGTaGAGCGGTGAGCTGAGCTGCCCATTTAAAAGGTTTGGATTGCAC | + |
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Preference number: 1 (lower is better) Translates to: RRICTISAWPPPAAK*SGELSCPFKRFGLH Trigger: GTGCAATCCAAACCTTTTAAATGGGCAGCTCAGCTCACCGCTTCACTTTGCTGCTGGAGGCGGCCATGCTGAAATAGTGCAGATCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR GCA 90 bp | GTAGGGATCTCCCAGCAGTTCTGTAGGAACATGCGCTGCAGGTGGTaGATTTCCTTACTGACGCCCTCACTCAGACTCAGATTCTTGTAC | + |
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Preference number: 1 (lower is better) Translates to: VGISQQFCRNMRCRW*ISLLTPSLRLRFLY Trigger: GTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAAATGCACCACCTGCAGCGCATGTTCCTACAGAACTGCTGGGAGATCCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR CCA 90 bp | TACGTAGGGATCTCCCAGCAGTTCTGTAGGAACATGCGCTGCAGGTaGTGCATTTCCTTACTGACGCCCTCACTCAGACTCAGATTCTTG | + |
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Preference number: 1 (lower is better) Translates to: YVGISQQFCRNMRCR*CISLLTPSLRLRFL Trigger: CAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAAATGCACCACCTGCAGCGCATGTTCCTACAGAACTGCTGGGAGATCCCTACGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR CCA 90 bp | CTCCTGGGCATTTACCCCACAGGGCTCTCAAGCCTCATAGAGATGTaGGACCATTCCTGTTCATTGCTGCTCTTGACAATATGCAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: LLGIYPTGLSSLIEM*DHSCSLLLLTICRK Trigger: TTTCCTGCATATTGTCAAGAGCAGCAATGAACAGGAATGGTCCCACATCTCTATGAGGCTTGAGAGCCCTGTGGGGTAAATGCCCAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR TCA 90 bp | AGCAGTTCTGTAGGAACATGCGCTGCAGGTGGTGCATTTCCTTACTaGCGCCCTCACTCAGACTCAGATTCTTGTACTCATGGAGTATTC | + |
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Preference number: 1 (lower is better) Translates to: SSSVGTCAAGGAFPY*RPHSDSDSCTHGVF Trigger: GAATACTCCATGAGTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAAATGCACCACCTGCAGCGCATGTTCCTACAGAACTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR CCA 90 bp | GAGTTTCCTGAGAGAGCCGCATTCCCTCCATTATCTGCTGTGCTGTaGTATTATTGCCATGCTTTAGTTCAACAGAACGGTATGATCCAT | + |
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Preference number: 1 (lower is better) Translates to: EFPERAAFPPLSAVL*YYCHALVQQNGMIH Trigger: ATGGATCATACCGTTCTGTTGAACTAAAGCATGGCAATAATACCACAGCACAGCAGATAATGGAGGGAATGCGGCTCTCTCAGGAAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR CCA 90 bp | CTTTCTCTAATAATATGCGAGTGGCCTCAACTTTTCCATACCTATTaGCTATCTCTCTGTACGGCTTGTAAAGAAGACTGCGAGTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: LSLIICEWPQLFHTY*LSLCTACKEDCECS Trigger: AGAGCACTCGCAGTCTTCTTTACAAGCCGTACAGAGAGATAGCCAATAGGTATGGAAAAGTTGAGGCCACTCGCATATTATTAGAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR TCA 90 bp | CTCAGACTCAGATTCTTGTACTCATGGAGTATTCGGTTTATCCAGTaGGGCGCCTTACTTTTCAGTTTAGTAATAGGTACGATGGATTTC | + |
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Preference number: 1 (lower is better) Translates to: LRLRFLYSWSIRFIQ*GALLFSLVIGTMDF Trigger: GAAATCCATCGTACCTATTACTAAACTGAAAAGTAAGGCGCCTCACTGGATAAACCGAATACTCCATGAGTACAAGAATCTGAGTCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR CCA 90 bp | TTAGATCTGAGATTTAAAATTAAGAAATTATTCCCAAACCATCCTTaGTACACCCAGAGGATGGAAAACTGTGCAGGGAGTGAGCGTCTG | + |
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Preference number: 1 (lower is better) Translates to: LDLRFKIKKLFPNHP*YTQRMENCAGSERL Trigger: CAGACGCTCACTCCCTGCACAGTTTTCCATCCTCTGGGTGTACCAAGGATGGTTTGGGAATAATTTCTTAATTTTAAATCTCAGATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR TCA 90 bp | TATTGTTCTACTACAGTGAAGAGATACCATGATCAAGGCAACTTATaGAAGAAAGCATTAACTGGGGGCTTGCTAACAGTTACAGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: YCSTTVKRYHDQGNL*KKALTGGLLTVTGC Trigger: ACACCCTGTAACTGTTAGCAAGCCCCCAGTTAATGCTTTCTTTCATAAGTTGCCTTGATCATGGTATCTCTTCACTGTAGTAGAACAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR CCA 90 bp | TTAAAAGGTTTGGATTGCACTTTCCTTTCTCTAATAATATGCGAGTaGCCTCAACTTTTCCATACCTATTGGCTATCTCTCTGTACGGCT | + |
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Preference number: 1 (lower is better) Translates to: LKGLDCTFLSLIICE*PQLFHTYWLSLCTA Trigger: AGCCGTACAGAGAGATAGCCAATAGGTATGGAAAAGTTGAGGCCACTCGCATATTATTAGAGAAAGGAAAGTGCAATCCAAACCTTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR TCA 90 bp | TACTTGAGACTGATGAGTAATGCCTTAGTTTCCATGTTCAGGAGATaGAGTCCTTTTATATTCACTCCTACATACACAGGGATGACTTTA | + |
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Preference number: 1 (lower is better) Translates to: YLRLMSNALVSMFRR*SPFIFTPTYTGMTL Trigger: TAAAGTCATCCCTGTGTATGTAGGAGTGAATATAAAAGGACTTCATCTCCTGAACATGGAAACTAAGGCATTACTCATCAGTCTCAAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR-3UTR TCA 90 bp | CGCATTCCCTCCATTATCTGCTGTGCTGTGGTATTATTGCCATGCTTTAGTTCACCTCCAGCAGCAAAGTaGAGCGGTGAGCTGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: RIPSIICCAVVLLPCFSSPPAAK*SGELSC Trigger: GCAGCTCAGCTCACCGCTTCACTTTGCTGCTGGAGG...TGAACTAAAGCATGGCAATAATACCACAGCACAGCAGATAATGGAGGGAATGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR-3UTR GCA 90 bp | CGCATTCCCTCCATTATCTGCTGTGCTGTGGTATTATTGCCATGCTTTAGTTCAGCTTGTAAAGAAGACTaGGAGTGCTCTCCTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: RIPSIICCAVVLLPCFSSACKED*ECSPQG Trigger: GCCCTGAGGAGAGCACTCGCAGTCTTCTTTACAAGC...TGAACTAAAGCATGGCAATAATACCACAGCACAGCAGATAATGGAGGGAATGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR-3UTR GCA 90 bp | CTTGTTGATCTGTTATGTGCCTGTCAATGTCTGGGTGAGTCAGGAGGATCTGCAAGCGGTGAGCTGAGCTaGCCATTTAAAAGGTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: LVDLLCACQCLGESGGSASGELS*PFKRFG Trigger: TCCAAACCTTTTAAATGGGCAGCTCAGCTCACCGCT...TGCAGATCCTCCTGACTCACCCAGACATTGACAGGCACATAACAGATCAACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR-3UTR CCA 90 bp | CGCATTCCCTCCATTATCTGCTGTGCTGTGGTATTATTGCCATGCTTTAGTTCATGCACTATTTCAGCATaGCCGCCTCCAGCAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: RIPSIICCAVVLLPCFSSCTISA*PPPAAK Trigger: CTTTGCTGCTGGAGGCGGCCATGCTGAAATAGTGCA...TGAACTAAAGCATGGCAATAATACCACAGCACAGCAGATAATGGAGGGAATGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR CAA 90 bp | ACAGGGCTCTCAAGCCTCATAGAGATGTGGGACCATTCCTGTTCATaGCTGCTCTTGACAATATGCAGGAAATGGGACCAGTTCATCAAA | + |
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Preference number: 2 (lower is better) Translates to: TGLSSLIEMWDHSCS*LLLTICRKWDQFIK Trigger: TTTGATGAACTGGTCCCATTTCCTGCATATTGTCAAGAGCAGCAATGAACAGGAATGGTCCCACATCTCTATGAGGCTTGAGAGCCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTCCTTACTGACGCCCTCACTCAGACTCAGATTCTTGTACTCATGGAGTATTCTGTCAATGTCTGGGTaGGTCAGGAGGATCTGCACT | + |
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Preference number: 2 (lower is better) Translates to: ISLLTPSLRLRFLYSWSILSMSG*VRRICT Trigger: AGTGCAGATCCTCCTGACTCACCCAGACATTGACAG...AATACTCCATGAGTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR-3UTR TCA 90 bp | TTTGTAAATATCTGTCCTGTGAAGAAGGCGGCTCCGTACGTAGGGATCTCCCAGATTTCTGGCCAGTCATaGACTTGTTGCAAGGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: FVNICPVKKAAPYVGISQISGQS*TCCKGL Trigger: TAAACCCTTGCAACAAGTTCATGACTGGCCAGAAAT...CTGGGAGATCCCTACGTACGGAGCCGCCTTCTTCACAGGACAGATATTTACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR-3UTR TCA 90 bp | ATTTCCTTACTGACGCCCTCACTCAGACTCAGATTCTTGTACTCATGGAGTATTAGTGAAGCGGTGAGCTaGGCTGCCCATTTAAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: ISLLTPSLRLRFLYSWSISEAVS*AAHLKG Trigger: ACCTTTTAAATGGGCAGCTCAGCTCACCGCTTCACT...AATACTCCATGAGTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR-3UTR GCA 90 bp | ACCAACTGGGAATCAAACATTCAAACTTGTGAGTCAAAGGGGCTATTTTCATTCCAGTGGGGCTCTGGTTaGTCAGGGTATATGGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: TNWESNIQTCESKGLFSFQWGSG*SGYMAN Trigger: GTTGGCCATATACCCTGAGCAACCAGAGCCCCACTG...GAATGAAAATAGCCCCTTTGACTCACAAGTTTGAATGTTTGATTCCCAGTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGTAAATATCTGTCCTGTGAAGAAGGCGGCTCCGTACGTAGGGATCTCCCAGTTCAGCAAGTATTTCTaGCCAGTCATGAACTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: FVNICPVKKAAPYVGISQFSKYF*PVMNLL Trigger: CAACAAGTTCATGACTGGCCAGAAATACTTGCTGAA...CTGGGAGATCCCTACGTACGGAGCCGCCTTCTTCACAGGACAGATATTTACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR-3UTR CCA 90 bp | AATAGACAGGACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAATCCTCAGTGGGGCTCTaGTTGCTCAGGGTATATGGC | + |
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Preference number: 2 (lower is better) Translates to: NRQDQCYSNQNSHAILTESSVGL*LLRVYG Trigger: GCCATATACCCTGAGCAACCAGAGCCCCACTGAGGA...TTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTCCTGTCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR CAA 90 bp | GCAAATGAAAATGAAAACTTTGGTAAGAGGAAGAGGAACATCTCATaGATGGTGAGAGTGTCGACTGGTGCATCCTCTGGAGAGATCAGT | + |
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Preference number: 2 (lower is better) Translates to: ANENENFGKRKRNIS*MVRVSTGASSGEIS Trigger: ACTGATCTCTCCAGAGGATGCACCAGTCGACACTCTCACCATCAATGAGATGTTCCTCTTCCTCTTACCAAAGTTTTCATTTTCATTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTACTGACGCCCTCACTCAGACTCAGATTCTTGTACTCATGGAGTATTCGATTCCCTCCATTATCTaGTGTGCTGTGGTATTATTG | + |
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Preference number: 2 (lower is better) Translates to: FLTDALTQTQILVLMEYSIPSII*CAVVLL Trigger: CAATAATACCACAGCACAGCAGATAATGGAGGGAAT...CGAATACTCCATGAGTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR-3UTR CCA 90 bp | GACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAAACTGAAAAAAAGGACTTTCCTCAGTaGGGCTCTGGTTGCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: DQCYSNQNSHAILTETEKKDFPQ*GSGCSG Trigger: CCCTGAGCAACCAGAGCCCCACTGAGGAAAGTCCTT...TTTTTCAGTTTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTC 43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAAACATAATACAGAAGGCATTACCATACCCAGTGTCTTAGTTATTGTTCTAGGAAACAGCAACAGGTaGTCAGACATGGCCACTAGC | + |
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Preference number: 2 (lower is better) Translates to: GKHNTEGITIPSVLVIVLGNSNR*SDMATS Trigger: GCTAGTGGCCATGTCTGACCACCTGTTGCTGTTTCC...TAGAACAATAACTAAGACACTGGGTATGGTAATGCCTTCTGTATTATGTTTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR TCA 90 bp | AATAGACAGGACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAACTCCAGGCTAGGAGATaGGAGCAAGTCTTTGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: NRQDQCYSNQNSHAILTELQARR*EQVFAR Trigger: TCTAGCAAAGACTTGCTCTCATCTCCTAGCCTGGAG...TTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTCCTGTCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTACTGACGCCCTCACTCAGACTCAGATTCTTGTACTCATGGAGTATTCGTTCAACAGAACGGTATaGTCCATCCATTCTATAGAT | + |
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Preference number: 2 (lower is better) Translates to: FLTDALTQTQILVLMEYSFNRTV*SIHSID Trigger: ATCTATAGAATGGATGGATCATACCGTTCTGTTGAA...CGAATACTCCATGAGTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTACTGACGCCCTCACTCAGACTCAGATTCTTGTACTCATGGAGTATTCGCTTTCTCTAATAATATaGGAGTGGCCTCAACTTTTC | + |
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Preference number: 2 (lower is better) Translates to: FLTDALTQTQILVLMEYSLSLII*EWPQLF Trigger: GAAAAGTTGAGGCCACTCGCATATTATTAGAGAAAG...CGAATACTCCATGAGTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR-3UTR TCA 90 bp | ACCAACTGGGAATCAAACATTCAAACTTGTGAGTCAAAGGGGCTATTTTCATTCAACCCAGCTTCATATTaGCTGAAGAATGCCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: TNWESNIQTCESKGLFSFNPASY*LKNATD Trigger: GTCTGTGGCATTCTTCAGTCAATATGAAGCTGGGTT...GAATGAAAATAGCCCCTTTGACTCACAAGTTTGAATGTTTGATTCCCAGTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR TCA 90 bp | GACAACAGTAAACAAACAATCCCAAAACCCATAGGTTCAAAGAAAACAAAGACTAAAAAGGAAGCTCTCTaGGTTCGAGGCCAGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: DNSKQTIPKPIGSKKTKTKKEAL*VRGQSE Trigger: CTCAGACTGGCCTCGAACTCAGAGAGCTTCCTTTTT...AGTCTTTGTTTTCTTTGAACCTATGGGTTTTGGGATTGTTTGTTTACTGTTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR CCA 90 bp | GACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAAACTGAAAAACAGGGAGTGAGCGTCTaGACTCATCAGTGTGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: DQCYSNQNSHAILTETEKQGVSV*THQCVK Trigger: CTTTACACACTGATGAGTCCAGACGCTCACTCCCTG...TTTTTCAGTTTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTCCTTACTGACGCCCTCACTCAGACTCAGATTCTTGTACTCATGGAGTATTCTAATAATATGCGAGTaGCCTCAACTTTTCCATACC | + |
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Preference number: 2 (lower is better) Translates to: ISLLTPSLRLRFLYSWSILIICE*PQLFHT Trigger: GGTATGGAAAAGTTGAGGCCACTCGCATATTATTAG...AATACTCCATGAGTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR-3UTR TCA 90 bp | CATTACCATACCCAGTGTCTTAGTTATTGTTCTACTACAGTGAAGAGATACCATGTTCATTGCTGCTCTTaGCAATATGCAGGAAATGGG | + |
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Preference number: 2 (lower is better) Translates to: HYHTQCLSYCSTTVKRYHVHCCS*QYAGNG Trigger: CCCATTTCCTGCATATTGTCAAGAGCAGCAATGAAC...ATGGTATCTCTTCACTGTAGTAGAACAATAACTAAGACACTGGGTATGGTAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAATGAAAATGAAAACTTTGGTAAGAGGAAGAGGAACATCTCATTGATGGTGCTGCTCTTGACAATATaGAGGAAATGGGACCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: ANENENFGKRKRNISLMVLLLTI*RKWDQF Trigger: GAACTGGTCCCATTTCCTGCATATTGTCAAGAGCAG...CACCATCAATGAGATGTTCCTCTTCCTCTTACCAAAGTTTTCATTTTCATTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR CCA 90 bp | GACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAAACTGAAAAATTCCCAAACCATCCTTaGTACACCCAGAGGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: DQCYSNQNSHAILTETEKFPNHP*YTQRME Trigger: TTCCATCCTCTGGGTGTACCAAGGATGGTTTGGGAA...TTTTTCAGTTTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR TCA 90 bp | GACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAAACTGAAAAATGGCGTTGGGAAAACTaGTGTCTACATGCATTAGAC | + |
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Preference number: 2 (lower is better) Translates to: DQCYSNQNSHAILTETEKWRWEN*CLHALD Trigger: GTCTAATGCATGTAGACATCAGTTTTCCCAACGCCA...TTTTTCAGTTTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAATGAAAATGAAAACTTTGGTAAGAGGAAGAGGAACATCTCATTGATGGTGATCTGCTTGTGTGTGTaGTTTGATATGACAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: ANENENFGKRKRNISLMVICLCV*FDMTAS Trigger: ACTGGCTGTCATATCAAAGCACACACACAAGCAGAT...CACCATCAATGAGATGTTCCTCTTCCTCTTACCAAAGTTTTCATTTTCATTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR CCA 90 bp | GACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAAACTGAAAAAGAACTGTGTTTAACTTaGAGTGCCTGTACAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: DQCYSNQNSHAILTETEKELCLT*SACTSQ Trigger: CTGGCTTGTACAGGCACTCCAAGTTAAACACAGTTC...TTTTTCAGTTTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR CCA 90 bp | CATTACCATACCCAGTGTCTTAGTTATTGTTCTACTACAGTGAAGAGATACCATTTTTCCCTTCCCATCTaGGCAATCATGTCAAATGTG | + |
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Preference number: 2 (lower is better) Translates to: HYHTQCLSYCSTTVKRYHFSLPI*AIMSNV Trigger: CACATTTGACATGATTGCCCAGATGGGAAGGGAAAA...ATGGTATCTCTTCACTGTAGTAGAACAATAACTAAGACACTGGGTATGGTAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR-3UTR TCA 90 bp | GACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAAACTGAAAAACAGCTTCATATTGACTaGAGAATGCCACAGACAATC | + |
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Preference number: 2 (lower is better) Translates to: DQCYSNQNSHAILTETEKQLHID*RMPQTI Trigger: GATTGTCTGTGGCATTCTTCAGTCAATATGAAGCTG...TTTTTCAGTTTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| 3UTR CAA 90 bp | CAAATTAGTCAATTCAGCAAGTATTTCTGGCCAGTCATGAACTTGTaGCAAGGGTTTATGATAAGGCTTGAACTGAAGACTAAGATTTTC | + |
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Preference number: 2 (lower is better) Translates to: QISQFSKYFWPVMNL*QGFMIRLELKTKIF Trigger: GAAAATCTTAGTCTTCAGTTCAAGCCTTATCATAAACCCTTGCAACAAGTTCATGACTGGCCAGAAATACTTGCTGAATTGACTAATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR CAA 90 bp | ATCCAAATTAGTCAATTCAGCAAGTATTTCTGGCCAGTCATGAACTaGTTGCAAGGGTTTATGATAAGGCTTGAACTGAAGACTAAGATT | + |
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Preference number: 2 (lower is better) Translates to: IQISQFSKYFWPVMN*LQGFMIRLELKTKI Trigger: AATCTTAGTCTTCAGTTCAAGCCTTATCATAAACCCTTGCAACAAGTTCATGACTGGCCAGAAATACTTGCTGAATTGACTAATTTGGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| 3UTR-3UTR TCA 90 bp | AATAGACAGGACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAAAGTGAAGAGATACCATaGTCAAGGCAACTTATGAAA | + |
|
Preference number: 2 (lower is better) Translates to: NRQDQCYSNQNSHAILTESEEIP*SRQLMK Trigger: TTTCATAAGTTGCCTTGATCATGGTATCTCTTCACT...TTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTCCTGTCTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCAAACATAATACAGAAGGCATTACCATACCCAGTGTCTTAGTTATTGTTCTAAACAGCCTTACCAACTaGGAATCAAACATTCAAACT | + |
|
Preference number: 2 (lower is better) Translates to: GKHNTEGITIPSVLVIVLNSLTN*ESNIQT Trigger: AGTTTGAATGTTTGATTCCCAGTTGGTAAGGCTGTT...TAGAACAATAACTAAGACACTGGGTATGGTAATGCCTTCTGTATTATGTTTGCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR-3UTR TCA 90 bp | GACAACAGTAAACAAACAATCCCAAAACCCATAGGTTCAAAGAAAACAAAGACTGAAAATTATACTGCATaGAGTAACCCACATCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: DNSKQTIPKPIGSKKTKTENYTA*SNPHPE Trigger: TTCTGGATGTGGGTTACTTCATGCAGTATAATTTTC...AGTCTTTGTTTTCTTTGAACCTATGGGTTTTGGGATTGTTTGTTTACTGTTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR-3UTR GCA 90 bp | GACAACAGTAAACAAACAATCCCAAAACCCATAGGTTCAAAGAAAACAAAGACTCAATCATGTCAAATGTaGTATGTAGCTAGGTTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: DNSKQTIPKPIGSKKTKTQSCQM*YVARLA Trigger: TGCTAACCTAGCTACATAGCACATTTGACATGATTG...AGTCTTTGTTTTCTTTGAACCTATGGGTTTTGGGATTGTTTGTTTACTGTTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR-3UTR GCA 90 bp | GACAACAGTAAACAAACAATCCCAAAACCCATAGGTTCAAAGAAAACAAAGACTATATTGACTGAAGAATaGCACAGACAATCTGAAACT | + |
|
Preference number: 2 (lower is better) Translates to: DNSKQTIPKPIGSKKTKTILTEE*HRQSET Trigger: AGTTTCAGATTGTCTGTGGCATTCTTCAGTCAATAT...AGTCTTTGTTTTCTTTGAACCTATGGGTTTTGGGATTGTTTGTTTACTGTTGTC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR GCA 72 bp | GTAGGGATCTCCCAGCAGTTCTGTAGGAACATGCGCTaGAGGTGGTGCATTTCCTTACTGACGCCCTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: VGISQQFCRNMR*RWCISLLTPSL Trigger: GAGTGAGGGCGTCAGTAAGGAAATGCACCACCTGCAGCGCATGTTCCTACAGAACTGCTGGGAGATCCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR GCA 72 bp | TCCCAGCAGTTCTGTAGGAACATGCGCTGCAGGTGGTaGATTTCCTTACTGACGCCCTCACTCAGACTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SQQFCRNMRCRW*ISLLTPSLRLR Trigger: TCTGAGTCTGAGTGAGGGCGTCAGTAAGGAAATGCACCACCTGCAGCGCATGTTCCTACAGAACTGCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR CCA 72 bp | ATCTCCCAGCAGTTCTGTAGGAACATGCGCTGCAGGTaGTGCATTTCCTTACTGACGCCCTCACTCAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: ISQQFCRNMRCR*CISLLTPSLRL Trigger: GAGTCTGAGTGAGGGCGTCAGTAAGGAAATGCACCACCTGCAGCGCATGTTCCTACAGAACTGCTGGGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR TCA 72 bp | CATGGCCGCCTCCAGCAGCAAAGTGAAGCGGTGAGCTaGGCTGCCCATTTAAAAGGTTTGGATTGCACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: HGRLQQQSEAVS*AAHLKGLDCTF Trigger: GAAAGTGCAATCCAAACCTTTTAAATGGGCAGCTCAGCTCACCGCTTCACTTTGCTGCTGGAGGCGGCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR GCA 72 bp | CTATCTCTCTGTACGGCTTGTAAAGAAGACTGCGAGTaGTCTCCTCAGGGCAGATCTGGCAGTTCCGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: LSLCTACKEDCE*SPQGRSGSSEQ Trigger: CTGTTCGGAACTGCCAGATCTGCCCTGAGGAGAGCACTCGCAGTCTTCTTTACAAGCCGTACAGAGAGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR CCA 72 bp | CCCAGAGGATGGAAAACTGTGCAGGGAGTGAGCGTCTaGACTCATCAGTGTGTAAAGACACTAGGACCGATG | + |
|
Preference number: 3 (lower is better) Translates to: PRGWKTVQGVSV*THQCVKTLGPM Trigger: CATCGGTCCTAGTGTCTTTACACACTGATGAGTCCAGACGCTCACTCCCTGCACAGTTTTCCATCCTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR TCA 72 bp | TGCACTATTTCAGCATGGCCGCCTCCAGCAGCAAAGTaGAGCGGTGAGCTGAGCTGCCCATTTAAAAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: CTISAWPPPAAK*SGELSCPFKRF Trigger: AAACCTTTTAAATGGGCAGCTCAGCTCACCGCTTCACTTTGCTGCTGGAGGCGGCCATGCTGAAATAGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR GCA 72 bp | GAGGAACATCTCATTGATGGTGAGAGTGTCGACTGGTaGATCCTCTGGAGAGATCAGTGTGGAGGCTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: EEHLIDGESVDW*ILWRDQCGGSL Trigger: CAAAGAGCCTCCACACTGATCTCTCCAGAGGATGCACCAGTCGACACTCTCACCATCAATGAGATGTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR GCA 72 bp | TATTGGCTATCTCTCTGTACGGCTTGTAAAGAAGACTaGGAGTGCTCTCCTCAGGGCAGATCTGGCAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: YWLSLCTACKED*ECSPQGRSGSS Trigger: GGAACTGCCAGATCTGCCCTGAGGAGAGCACTCGCAGTCTTCTTTACAAGCCGTACAGAGAGATAGCCAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR CCA 72 bp | GAAGAGGAACATCTCATTGATGGTGAGAGTGTCGACTaGTGCATCCTCTGGAGAGATCAGTGTGGAGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EEEHLIDGESVD*CILWRDQCGGS Trigger: AGAGCCTCCACACTGATCTCTCCAGAGGATGCACCAGTCGACACTCTCACCATCAATGAGATGTTCCTCTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR TCA 72 bp | GTAGGAACATGCGCTGCAGGTGGTGCATTTCCTTACTaGCGCCCTCACTCAGACTCAGATTCTTGTACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VGTCAAGGAFPY*RPHSDSDSCTH Trigger: ATGAGTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAAATGCACCACCTGCAGCGCATGTTCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR CCA 72 bp | GAGTGTCGACTGGTGCATCCTCTGGAGAGATCAGTGTaGAGGCTCTTTGCAAAGCTCAAAGTAGAATCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ECRLVHPLERSV*RLFAKLKVESP Trigger: TGGAGATTCTACTTTGAGCTTTGCAAAGAGCCTCCACACTGATCTCTCCAGAGGATGCACCAGTCGACACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR CCA 72 bp | GTACACGATAGAGCTATAGATAAGGACTTTCCTCAGTaGGGCTCTGGTTGCTCAGGGTATATGGCCAACGAC | + |
|
Preference number: 3 (lower is better) Translates to: VHDRAIDKDFPQ*GSGCSGYMAND Trigger: GTCGTTGGCCATATACCCTGAGCAACCAGAGCCCCACTGAGGAAAGTCCTTATCTATAGCTCTATCGTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGTAAATATCTGTCCTGTGAAGAAGGCGGCTCCGTACGTAGGGATCTCCCAGTGGGGATCTTCCTTGTaGATCTGTTATGTGCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: FVNICPVKKAAPYVGISQWGSSL*ICYVPV Trigger: GACAGGCACATAACAGATCAACAAGGAAGATCCCCA...CTGGGAGATCCCTACGTACGGAGCCGCCTTCTTCACAGGACAGATATTTACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR CCA 72 bp | AATTATTCCCAAACCATCCTTGGTACACCCAGAGGATaGAAAACTGTGCAGGGAGTGAGCGTCTGGACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: NYSQTILGTPRG*KTVQGVSVWTH Trigger: ATGAGTCCAGACGCTCACTCCCTGCACAGTTTTCCATCCTCTGGGTGTACCAAGGATGGTTTGGGAATAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR CCA 72 bp | ATTTACCCCACAGGGCTCTCAAGCCTCATAGAGATGTaGGACCATTCCTGTTCATTGCTGCTCTTGACAATA | + |
|
Preference number: 3 (lower is better) Translates to: IYPTGLSSLIEM*DHSCSLLLLTI Trigger: TATTGTCAAGAGCAGCAATGAACAGGAATGGTCCCACATCTCTATGAGGCTTGAGAGCCCTGTGGGGTAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR CCA 72 bp | GAGAGAGCCGCATTCCCTCCATTATCTGCTGTGCTGTaGTATTATTGCCATGCTTTAGTTCAACAGAACGGT | + |
|
Preference number: 3 (lower is better) Translates to: ERAAFPPLSAVL*YYCHALVQQNG Trigger: ACCGTTCTGTTGAACTAAAGCATGGCAATAATACCACAGCACAGCAGATAATGGAGGGAATGCGGCTCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGCCGCATTCCCTCCATTATCTGCTGTGCTGTGGTATTATTGCCATGCTTGCCCATTTAAAAGGTTaGGATTGCACTTTCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: REPHSLHYLLCCGIIAMLAHLKG*DCTFLS Trigger: AGAAAGGAAAGTGCAATCCAAACCTTTTAAATGGGC...AAGCATGGCAATAATACCACAGCACAGCAGATAATGGAGGGAATGCGGCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCAACTGGGAATCAAACATTCAAACTTGTGAGTCAAAGGGGCTATTTTCATTCATTCCCAAACCATCCTaGGTACACCCAGAGGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: TNWESNIQTCESKGLFSFIPKPS*VHPEDG Trigger: TCCATCCTCTGGGTGTACCAAGGATGGTTTGGGAAT...GAATGAAAATAGCCCCTTTGACTCACAAGTTTGAATGTTTGATTCCCAGTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR TCA 72 bp | ATGCCAAATGTTCTCTCTGATTTGTGGATCATAGACTaGACTGTGTTTAACTTGGAGTGCCTGTACAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: MPNVLSDLWIID*TVFNLECLYKP Trigger: TGGCTTGTACAGGCACTCCAAGTTAAACACAGTTCAGTCTATGATCCACAAATCAGAGAGAACATTTGGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR TCA 72 bp | CAGCCTTACCAACTGGGAATCAAACATTCAAACTTGTaGGTCAAAGGGGCTATTTTCATTCAAACCACCACA | + |
|
Preference number: 3 (lower is better) Translates to: QPYQLGIKHSNL*VKGAIFIQTTT Trigger: TGTGGTGGTTTGAATGAAAATAGCCCCTTTGACTCACAAGTTTGAATGTTTGATTCCCAGTTGGTAAGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCCTTACTGACGCCCTCACTCAGACTCAGATTCTTGTACTCATGGAGTATTCGTCTTTCAACAATTTaGCAGCTTCTTCCCAGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: ISLLTPSLRLRFLYSWSIRLSTI*QLLPSY Trigger: ATAACTGGGAAGAAGCTGCAAAATTGTTGAAAGACG...AATACTCCATGAGTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR-3UTR CAA 90 bp | CGCATTCCCTCCATTATCTGCTGTGCTGTGGTATTATTGCCATGCTTTAGTTCAACTTTTTCATATGGCTaGTTAATGGCGTCTTTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: RIPSIICCAVVLLPCFSSTFSYG*LMASFN Trigger: GTTGAAAGACGCCATTAACAAGCCATATGAAAAAGT...TGAACTAAAGCATGGCAATAATACCACAGCACAGCAGATAATGGAGGGAATGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR TCA 72 bp | AGATTCTTGTACTCATGGAGTATTCGGTTTATCCAGTaGGGCGCCTTACTTTTCAGTTTAGTAATAGGTACG | + |
|
Preference number: 3 (lower is better) Translates to: RFLYSWSIRFIQ*GALLFSLVIGT Trigger: CGTACCTATTACTAAACTGAAAAGTAAGGCGCCTCACTGGATAAACCGAATACTCCATGAGTACAAGAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR-3UTR CAA 90 bp | GACAACAGTAAACAAACAATCCCAAAACCCATAGGTTCAAAGAAAACAAAGACTAAACCCAGCTTCATATaGACTGAAGAATGCCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: DNSKQTIPKPIGSKKTKTKPSFI*TEECHR Trigger: TCTGTGGCATTCTTCAGTCAATATGAAGCTGGGTTT...AGTCTTTGTTTTCTTTGAACCTATGGGTTTTGGGATTGTTTGTTTACTGTTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR TCA 72 bp | ACCATACCCAGTGTCTTAGTTATTGTTCTACTACAGTaGAGAGATACCATGATCAAGGCAACTTATGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TIPSVLVIVLLQ*RDTMIKATYER Trigger: TCTTTCATAAGTTGCCTTGATCATGGTATCTCTTCACTGTAGTAGAACAATAACTAAGACACTGGGTATGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR TCA 72 bp | TTTATATTCACTCCTACATACACAGGGATGACTTTATaGTTGCTTGGGCTTGCCTTTGTAAATATCTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FIFTPTYTGMTL*LLGLAFVNICP Trigger: AGGACAGATATTTACAAAGGCAAGCCCAAGCAATCATAAAGTCATCCCTGTGTATGTAGGAGTGAATATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR-3UTR CAA 90 bp | GACAACAGTAAACAAACAATCCCAAAACCCATAGGTTCAAAGAAAACAAAGACTGGTTCAGTTAGTCACTaGGCAAATGAAAATGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: DNSKQTIPKPIGSKKTKTGSVSH*ANENEN Trigger: GTTTTCATTTTCATTTGCCAAGTGACTAACTGAACC...AGTCTTTGTTTTCTTTGAACCTATGGGTTTTGGGATTGTTTGTTTACTGTTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR GCA 72 bp | AAAGCAGCAGTATACAAGATTAACATAAAAATCCACTaGATACCAATGGCACACTTAGAGAAATCAGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KAAVYKINIKIH*IPMAHLEKSGN Trigger: ATTCCCTGATTTCTCTAAGTGTGCCATTGGTATGCAGTGGATTTTTATGTTAATCTTGTATACTGCTGCTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGGGTGAGTCAGGAGGATCTGCACTATTTCAGCATGGCCGCCTCCAGCAGCTTCCCTTTAATCCCCTaGTTTGCAGGAGAAATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VWVSQEDLHYFSMAASSSFPLIP*FAGEIG Trigger: ACCAATTTCTCCTGCAAACCAGGGGATTAAAGGGAA...GCTGCTGGAGGCGGCCATGCTGAAATAGTGCAGATCCTCCTGACTCACCCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| CDS-3UTR CCA 90 bp | ATTTACCCCACAGGGCTCTCAAGCCTCATAGAGATGTGGGACCATTCCTGTTCATGCACTATTTCAGCATaGCCGCCTCCAGCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IYPTGLSSLIEMWDHSCSCTISA*PPPAAK Trigger: CTTTGCTGCTGGAGGCGGCCATGCTGAAATAGTGCA...TGAACAGGAATGGTCCCACATCTCTATGAGGCTTGAGAGCCCTGTGGGGTAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR TCA 90 bp | ATTTACCCCACAGGGCTCTCAAGCCTCATAGAGATGTGGGACCATTCCTGTTCAAGTGAAGCGGTGAGCTaGGCTGCCCATTTAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IYPTGLSSLIEMWDHSCSSEAVS*AAHLKG Trigger: ACCTTTTAAATGGGCAGCTCAGCTCACCGCTTCACT...TGAACAGGAATGGTCCCACATCTCTATGAGGCTTGAGAGCCCTGTGGGGTAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGCCGCATTCCCTCCATTATCTGCTGTGCTGTGGTATTATTGCCATGCTTCCACAACGCTGCTCATaGTTCGCTGCCATTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: REPHSLHYLLCCGIIAMLPQRCS*FAAIFP Trigger: AGGAAAAATGGCAGCGAAGCATGAGCAGCGTTGTGG...AAGCATGGCAATAATACCACAGCACAGCAGATAATGGAGGGAATGCGGCTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| CDS-3UTR GCA 90 bp | ATTTACCCCACAGGGCTCTCAAGCCTCATAGAGATGTGGGACCATTCCTGTTCAAGCGGTGAGCTGAGCTaGCCATTTAAAAGGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IYPTGLSSLIEMWDHSCSSGELS*PFKRFG Trigger: TCCAAACCTTTTAAATGGGCAGCTCAGCTCACCGCT...TGAACAGGAATGGTCCCACATCTCTATGAGGCTTGAGAGCCCTGTGGGGTAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR CAA 72 bp | AGTGCCTGTACAAGCCAGGACACTAGAAAGGGACTATaGAAGGGGTGTCAGGTGTTATATCACAGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SACTSQDTRKGL*KGCQVLYHRCC Trigger: ACAGCACCTGTGATATAACACCTGACACCCCTTCAATAGTCCCTTTCTAGTGTCCTGGCTTGTACAGGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR TCA 90 bp | CATTACCATACCCAGTGTCTTAGTTATTGTTCTACTACAGTGAAGAGATACCATCCTCCAGCAGCAAAGTaGAGCGGTGAGCTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HYHTQCLSYCSTTVKRYHPPAAK*SGELSC Trigger: GCAGCTCAGCTCACCGCTTCACTTTGCTGCTGGAGG...ATGGTATCTCTTCACTGTAGTAGAACAATAACTAAGACACTGGGTATGGTAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTACTGACGCCCTCACTCAGACTCAGATTCTTGTACTCATGGAGTATTCGTGGCACGATAAACAGTaGTGCTTCTCTGCCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLTDALTQTQILVLMEYSWHDKQ*CFSACL Trigger: AAGACAGGCAGAGAAGCAGCACTGTTTATCGTGCCA...CGAATACTCCATGAGTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR CAA 72 bp | TCAAGCCTCATAGAGATGTGGGACCATTCCTGTTCATaGCTGCTCTTGACAATATGCAGGAAATGGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSLIEMWDHSCS*LLLTICRKWDQ Trigger: CTGGTCCCATTTCCTGCATATTGTCAAGAGCAGCAATGAACAGGAATGGTCCCACATCTCTATGAGGCTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGCCGCATTCCCTCCATTATCTGCTGTGCTGTGGTATTATTGCCATGCTTCCTTGCTGTAAGTGTTaGAAAGTGAGTACTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: REPHSLHYLLCCGIIAMLPCCKC*KVSTGF Trigger: GAATCCAGTACTCACTTTGCAACACTTACAGCAAGG...AAGCATGGCAATAATACCACAGCACAGCAGATAATGGAGGGAATGCGGCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| CDS-3UTR GCA 90 bp | ATTTACCCCACAGGGCTCTCAAGCCTCATAGAGATGTGGGACCATTCCTGTTCAACAAAGGGTTGTAAATaGAGGTGTCTGCTTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IYPTGLSSLIEMWDHSCSTKGCK*RCLLSL Trigger: TAGAGAAAGCAGACACCTGCATTTACAACCCTTTGT...TGAACAGGAATGGTCCCACATCTCTATGAGGCTTGAGAGCCCTGTGGGGTAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | ATTTACCCCACAGGGCTCTCAAGCCTCATAGAGATGTGGGACCATTCCTGTTCAATGATTGCTTGGGCTTaGCTTTGTAAATATCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IYPTGLSSLIEMWDHSCSMIAWA*LCKYLS Trigger: GGACAGATATTTACAAAGGCAAGCCCAAGCAATCAT...TGAACAGGAATGGTCCCACATCTCTATGAGGCTTGAGAGCCCTGTGGGGTAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR CCA 90 bp | ATTTACCCCACAGGGCTCTCAAGCCTCATAGAGATGTGGGACCATTCCTGTTCACTAATAATATGCGAGTaGCCTCAACTTTTCCATACC | + |
|
Preference number: 4 (lower is better) Translates to: IYPTGLSSLIEMWDHSCSLIICE*PQLFHT Trigger: GGTATGGAAAAGTTGAGGCCACTCGCATATTATTAG...TGAACAGGAATGGTCCCACATCTCTATGAGGCTTGAGAGCCCTGTGGGGTAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTTGATCTGTTATGTGCCTGTCAATGTCTGGGTGAGTCAGGAGGATCTGCAGTAAGTGTTGCAAAGTaGGTACTGGATTCACTACAA | + |
|
Preference number: 4 (lower is better) Translates to: LVDLLCACQCLGESGGSAVSVAK*VLDSLQ Trigger: TTGTAGTGAATCCAGTACTCACTTTGCAACACTTAC...TGCAGATCCTCCTGACTCACCCAGACATTGACAGGCACATAACAGATCAACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| CDS-3UTR TCA 90 bp | ACCAACTGGGAATCAAACATTCAAACTTGTGAGTCAAAGGGGCTATTTTCATTCCTGTCAATGTCTGGGTaGGTCAGGAGGATCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TNWESNIQTCESKGLFSFLSMSG*VRRICT Trigger: AGTGCAGATCCTCCTGACTCACCCAGACATTGACAG...GAATGAAAATAGCCCCTTTGACTCACAAGTTTGAATGTTTGATTCCCAGTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCCTTACTGACGCCCTCACTCAGACTCAGATTCTTGTACTCATGGAGTATTCACGATAAACAGTGCTaGTTCTCTGCCTGTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISLLTPSLRLRFLYSWSIHDKQC*FSACLL Trigger: GAGAAGACAGGCAGAGAAGCAGCACTGTTTATCGTG...AATACTCCATGAGTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| CDS-3UTR TCA 90 bp | TATGCGAGTGGCCTCAACTTTTCCATACCTATTGGCTATCTCTCTGTACGGCTTATTATCTTTGACAACTaGTGGCACGATAAACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YASGLNFSIPIGYLSVRLIIFDN*WHDKQC Trigger: GCACTGTTTATCGTGCCATCAGTTGTCAAAGATAAT...AAGCCGTACAGAGAGATAGCCAATAGGTATGGAAAAGTTGAGGCCACTCGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| CDS-3UTR GCA 90 bp | TATGCGAGTGGCCTCAACTTTTCCATACCTATTGGCTATCTCTCTGTACGGCTTCTTTGGACGAATAACTaGAACGTAAGCATCTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: YASGLNFSIPIGYLSVRLLWTNN*NVSIFD Trigger: ATCGAAGATGCTTACGTTGCAGTTATTCGTCCAAAG...AAGCCGTACAGAGAGATAGCCAATAGGTATGGAAAAGTTGAGGCCACTCGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| CDS-3UTR GCA 90 bp | CATTACCATACCCAGTGTCTTAGTTATTGTTCTACTACAGTGAAGAGATACCATACAGTGCTGCTTCTCTaGCTGTCTTCTCTCCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HYHTQCLSYCSTTVKRYHTVLLL*LSSLRP Trigger: TGGACGGAGAGAAGACAGGCAGAGAAGCAGCACTGT...ATGGTATCTCTTCACTGTAGTAGAACAATAACTAAGACACTGGGTATGGTAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | ACCAACTGGGAATCAAACATTCAAACTTGTGAGTCAAAGGGGCTATTTTCATTCCCACAACGCTGCTCATaGTTCGCTGCCATTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TNWESNIQTCESKGLFSFPQRCS*FAAIFP Trigger: AGGAAAAATGGCAGCGAAGCATGAGCAGCGTTGTGG...GAATGAAAATAGCCCCTTTGACTCACAAGTTTGAATGTTTGATTCCCAGTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTAAATATCTGTCCTGTGAAGAAGGCGGCTCCGTACGTAGGGATCTCCCAGTGGTCATTATCTAGTTaGTTGACTGAAAGTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FVNICPVKKAAPYVGISQWSLSS*LTESPL Trigger: TAAAGGACTTTCAGTCAACCAACTAGATAATGACCA...CTGGGAGATCCCTACGTACGGAGCCGCCTTCTTCACAGGACAGATATTTACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| 3UTR CAA 72 bp | ATAGAGATGTGGGACCATTCCTGTTCATTGCTGCTCTaGACAATATGCAGGAAATGGGACCAGTTCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IEMWDHSCSLLL*TICRKWDQFIK Trigger: TTTGATGAACTGGTCCCATTTCCTGCATATTGTCAAGAGCAGCAATGAACAGGAATGGTCCCACATCTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | ACCAACTGGGAATCAAACATTCAAACTTGTGAGTCAAAGGGGCTATTTTCATTCCACGATAAACAGTGCTaGTTCTCTGCCTGTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TNWESNIQTCESKGLFSFHDKQC*FSACLL Trigger: GAGAAGACAGGCAGAGAAGCAGCACTGTTTATCGTG...GAATGAAAATAGCCCCTTTGACTCACAAGTTTGAATGTTTGATTCCCAGTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | ACCAACTGGGAATCAAACATTCAAACTTGTGAGTCAAAGGGGCTATTTTCATTCTGGCACGATAAACAGTaGTGCTTCTCTGCCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TNWESNIQTCESKGLFSFWHDKQ*CFSACL Trigger: AAGACAGGCAGAGAAGCAGCACTGTTTATCGTGCCA...GAATGAAAATAGCCCCTTTGACTCACAAGTTTGAATGTTTGATTCCCAGTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | CGCATTCCCTCCATTATCTGCTGTGCTGTGGTATTATTGCCATGCTTTAGTTCAACAAAGGGTTGTAAATaGAGGTGTCTGCTTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RIPSIICCAVVLLPCFSSTKGCK*RCLLSL Trigger: TAGAGAAAGCAGACACCTGCATTTACAACCCTTTGT...TGAACTAAAGCATGGCAATAATACCACAGCACAGCAGATAATGGAGGGAATGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| CDS-3UTR TCA 90 bp | CGCATTCCCTCCATTATCTGCTGTGCTGTGGTATTATTGCCATGCTTTAGTTCATGTATACTGAAGATCTaGTCCAAACAAAGGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RIPSIICCAVVLLPCFSSCILKI*SKQRVV Trigger: TACAACCCTTTGTTTGGATCAGATCTTCAGTATACA...TGAACTAAAGCATGGCAATAATACCACAGCACAGCAGATAATGGAGGGAATGCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| CDS-3UTR CCA 90 bp | GACAACAGTAAACAAACAATCCCAAAACCCATAGGTTCAAAGAAAACAAAGACTAACATGCGCTGCAGGTaGTGCATTTCCTTACTGACG | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQTIPKPIGSKKTKTNMRCR*CISLLT Trigger: CGTCAGTAAGGAAATGCACCACCTGCAGCGCATGTT...AGTCTTTGTTTTCTTTGAACCTATGGGTTTTGGGATTGTTTGTTTACTGTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTTACTGACGCCCTCACTCAGACTCAGATTCTTGTACTCATGGAGTATTACCCGATTTGTATACTaGAGATCTGATCCAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISLLTPSLRLRFLYSWSITRFVY*RSDPNK Trigger: TTTGTTTGGATCAGATCTTCAGTATACAAATCGGGT...AATACTCCATGAGTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| CDS-3UTR TCA 90 bp | ACCAACTGGGAATCAAACATTCAAACTTGTGAGTCAAAGGGGCTATTTTCATTCATTTCTGGCCAGTCATaGACTTGTTGCAAGGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TNWESNIQTCESKGLFSFISGQS*TCCKGL Trigger: TAAACCCTTGCAACAAGTTCATGACTGGCCAGAAAT...GAATGAAAATAGCCCCTTTGACTCACAAGTTTGAATGTTTGATTCCCAGTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR TCA 90 bp | GCAAATGAAAATGAAAACTTTGGTAAGAGGAAGAGGAACATCTCATTGATGGTGATTCGGTTTATCCAGTaGGGCGCCTTACTTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ANENENFGKRKRNISLMVIRFIQ*GALLFS Trigger: ACTGAAAAGTAAGGCGCCTCACTGGATAAACCGAAT...CACCATCAATGAGATGTTCCTCTTCCTCTTACCAAAGTTTTCATTTTCATTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCCTTACTGACGCCCTCACTCAGACTCAGATTCTTGTACTCATGGAGTATTCTACATAGTCCAATATaGCTTGTGCTATTTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISLLTPSLRLRFLYSWSILHSPI*LVLFHC Trigger: ACAGTGAAATAGCACAAGGCATATTGGACTATGTAG...AATACTCCATGAGTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| CDS-3UTR GCA 90 bp | ACCAACTGGGAATCAAACATTCAAACTTGTGAGTCAAAGGGGCTATTTTCATTCCTCCATTATCTGCTGTaGTGTGGTATTATTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TNWESNIQTCESKGLFSFLHYLL*CGIIAM Trigger: CATGGCAATAATACCACAGCACAGCAGATAATGGAG...GAATGAAAATAGCCCCTTTGACTCACAAGTTTGAATGTTTGATTCCCAGTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | GACAACAGTAAACAAACAATCCCAAAACCCATAGGTTCAAAGAAAACAAAGACTTGTAGGAACATGCGCTaGAGGTGGTGCATTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQTIPKPIGSKKTKTCRNMR*RWCISL Trigger: TAAGGAAATGCACCACCTGCAGCGCATGTTCCTACA...AGTCTTTGTTTTCTTTGAACCTATGGGTTTTGGGATTGTTTGTTTACTGTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | GACAACAGTAAACAAACAATCCCAAAACCCATAGGTTCAAAGAAAACAAAGACTAGTTCTGTAGGAACATaGGCTGCAGGTGGTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQTIPKPIGSKKTKTSSVGT*AAGGAF Trigger: AAATGCACCACCTGCAGCGCATGTTCCTACAGAACT...AGTCTTTGTTTTCTTTGAACCTATGGGTTTTGGGATTGTTTGTTTACTGTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR CCA 90 bp | ACCAACTGGGAATCAAACATTCAAACTTGTGAGTCAAAGGGGCTATTTTCATTCTTCCCTTTAATCCCCTaGTTTGCAGGAGAAATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TNWESNIQTCESKGLFSFFPLIP*FAGEIG Trigger: ACCAATTTCTCCTGCAAACCAGGGGATTAAAGGGAA...GAATGAAAATAGCCCCTTTGACTCACAAGTTTGAATGTTTGATTCCCAGTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| 3UTR CAA 72 bp | AGTCAATTCAGCAAGTATTTCTGGCCAGTCATGAACTaGTTGCAAGGGTTTATGATAAGGCTTGAACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQFSKYFWPVMN*LQGFMIRLELK Trigger: CTTCAGTTCAAGCCTTATCATAAACCCTTGCAACAAGTTCATGACTGGCCAGAAATACTTGCTGAATTGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| CDS-3UTR TCA 90 bp | GACAACAGTAAACAAACAATCCCAAAACCCATAGGTTCAAAGAAAACAAAGACTACAGGGATGACTTTATaGTTGCTTGGGCTTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQTIPKPIGSKKTKTTGMTL*LLGLAF Trigger: AAAGGCAAGCCCAAGCAATCATAAAGTCATCCCTGT...AGTCTTTGTTTTCTTTGAACCTATGGGTTTTGGGATTGTTTGTTTACTGTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR TCA 90 bp | GACAACAGTAAACAAACAATCCCAAAACCCATAGGTTCAAAGAAAACAAAGACTCTACATACACAGGGATaGCTTTATGATTGCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQTIPKPIGSKKTKTLHTQG*LYDCLG Trigger: GCCCAAGCAATCATAAAGTCATCCCTGTGTATGTAG...AGTCTTTGTTTTCTTTGAACCTATGGGTTTTGGGATTGTTTGTTTACTGTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | GCAAATGAAAATGAAAACTTTGGTAAGAGGAAGAGGAACATCTCATTGATGGTGCCTTGCTGTAAGTGTTaGAAAGTGAGTACTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: ANENENFGKRKRNISLMVPCCKC*KVSTGF Trigger: GAATCCAGTACTCACTTTGCAACACTTACAGCAAGG...CACCATCAATGAGATGTTCCTCTTCCTCTTACCAAAGTTTTCATTTTCATTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAACATAATACAGAAGGCATTACCATACCCAGTGTCTTAGTTATTGTTCTAAGCATGCATAATGAATaGGTGCCCAGTGGTCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: GKHNTEGITIPSVLVIVLSMHNE*VPSGHY Trigger: ATAATGACCACTGGGCACCCATTCATTATGCATGCT...TAGAACAATAACTAAGACACTGGGTATGGTAATGCCTTCTGTATTATGTTTGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR TCA 90 bp | GCAAATGAAAATGAAAACTTTGGTAAGAGGAAGAGGAACATCTCATTGATGGTGATTATCTTTGACAACTaGTGGCACGATAAACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ANENENFGKRKRNISLMVIIFDN*WHDKQC Trigger: GCACTGTTTATCGTGCCATCAGTTGTCAAAGATAAT...CACCATCAATGAGATGTTCCTCTTCCTCTTACCAAAGTTTTCATTTTCATTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR TCA 90 bp | CATTACCATACCCAGTGTCTTAGTTATTGTTCTACTACAGTGAAGAGATACCATGTAAGTGTTGCAAAGTaGGTACTGGATTCACTACAA | + |
|
Preference number: 4 (lower is better) Translates to: HYHTQCLSYCSTTVKRYHVSVAK*VLDSLQ Trigger: TTGTAGTGAATCCAGTACTCACTTTGCAACACTTAC...ATGGTATCTCTTCACTGTAGTAGAACAATAACTAAGACACTGGGTATGGTAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | GACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAAACTGAAAAATTTTCCATACCAGCATaGATAATGAATGGGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DQCYSNQNSHAILTETEKFSIPA*IMNGCP Trigger: TGGGCACCCATTCATTATGCATGCTGGTATGGAAAA...TTTTTCAGTTTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | AATAGACAGGACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAAATTCCCTCCATTATCTaGTGTGCTGTGGTATTATTG | + |
|
Preference number: 4 (lower is better) Translates to: NRQDQCYSNQNSHAILTEIPSII*CAVVLL Trigger: CAATAATACCACAGCACAGCAGATAATGGAGGGAAT...TTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTCCTGTCTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAACATAATACAGAAGGCATTACCATACCCAGTGTCTTAGTTATTGTTCTATTCAGCAAGTATTTCTaGCCAGTCATGAACTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKHNTEGITIPSVLVIVLFSKYF*PVMNLL Trigger: CAACAAGTTCATGACTGGCCAGAAATACTTGCTGAA...TAGAACAATAACTAAGACACTGGGTATGGTAATGCCTTCTGTATTATGTTTGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR TCA 90 bp | GACAACAGTAAACAAACAATCCCAAAACCCATAGGTTCAAAGAAAACAAAGACTCATACGCAGGGTTTATaGCATTTGTCTTTATCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQTIPKPIGSKKTKTHTQGL*HLSLSV Trigger: AACGGATAAAGACAAATGTCATAAACCCTGCGTATG...AGTCTTTGTTTTCTTTGAACCTATGGGTTTTGGGATTGTTTGTTTACTGTTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR TCA 90 bp | GGCAAACATAATACAGAAGGCATTACCATACCCAGTGTCTTAGTTATTGTTCTATGTATACTGAAGATCTaGTCCAAACAAAGGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GKHNTEGITIPSVLVIVLCILKI*SKQRVV Trigger: TACAACCCTTTGTTTGGATCAGATCTTCAGTATACA...TAGAACAATAACTAAGACACTGGGTATGGTAATGCCTTCTGTATTATGTTTGCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR TCA 90 bp | CATTACCATACCCAGTGTCTTAGTTATTGTTCTACTACAGTGAAGAGATACCATACCCGATTTGTATACTaGAGATCTGATCCAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: HYHTQCLSYCSTTVKRYHTRFVY*RSDPNK Trigger: TTTGTTTGGATCAGATCTTCAGTATACAAATCGGGT...ATGGTATCTCTTCACTGTAGTAGAACAATAACTAAGACACTGGGTATGGTAATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | GACAACAGTAAACAAACAATCCCAAAACCCATAGGTTCAAAGAAAACAAAGACTCTTTGGACGAATAACTaGAACGTAAGCATCTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQTIPKPIGSKKTKTLWTNN*NVSIFD Trigger: ATCGAAGATGCTTACGTTGCAGTTATTCGTCCAAAG...AGTCTTTGTTTTCTTTGAACCTATGGGTTTTGGGATTGTTTGTTTACTGTTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | AATAGACAGGACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAACTACATAGTCCAATATaGCTTGTGCTATTTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NRQDQCYSNQNSHAILTELHSPI*LVLFHC Trigger: ACAGTGAAATAGCACAAGGCATATTGGACTATGTAG...TTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTCCTGTCTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR CCA 90 bp | GCAAATGAAAATGAAAACTTTGGTAAGAGGAAGAGGAACATCTCATTGATGGTGTTATCTGCTGTGCTGTaGTATTATTGCCATGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ANENENFGKRKRNISLMVLSAVL*YYCHAL Trigger: TAAAGCATGGCAATAATACCACAGCACAGCAGATAA...CACCATCAATGAGATGTTCCTCTTCCTCTTACCAAAGTTTTCATTTTCATTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR CCA 90 bp | ACCAACTGGGAATCAAACATTCAAACTTGTGAGTCAAAGGGGCTATTTTCATTCGACTTTATGATTGCTTaGGCTTGCCTTTGTAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: TNWESNIQTCESKGLFSFDFMIA*ACLCKY Trigger: ATATTTACAAAGGCAAGCCCAAGCAATCATAAAGTC...GAATGAAAATAGCCCCTTTGACTCACAAGTTTGAATGTTTGATTCCCAGTTGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR TCA 90 bp | GACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAAACTGAAAAATTCAACAGAACGGTATaGTCCATCCATTCTATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DQCYSNQNSHAILTETEKFNRTV*SIHSID Trigger: ATCTATAGAATGGATGGATCATACCGTTCTGTTGAA...TTTTTCAGTTTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR TCA 90 bp | GACAACAGTAAACAAACAATCCCAAAACCCATAGGTTCAAAGAAAACAAAGACTTCCATGTTCAGGAGATaGAGTCCTTTTATATTCACT | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQTIPKPIGSKKTKTSMFRR*SPFIFT Trigger: AGTGAATATAAAAGGACTTCATCTCCTGAACATGGA...AGTCTTTGTTTTCTTTGAACCTATGGGTTTTGGGATTGTTTGTTTACTGTTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR GCA 90 bp | GACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAAACTGAAAAACTTTCTCTAATAATATaGGAGTGGCCTCAACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DQCYSNQNSHAILTETEKLSLII*EWPQLF Trigger: GAAAAGTTGAGGCCACTCGCATATTATTAGAGAAAG...TTTTTCAGTTTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR CCA 90 bp | GACAACAGTAAACAAACAATCCCAAAACCCATAGGTTCAAAGAAAACAAAGACTTGGTCATTATCTAGTTaGTTGACTGAAAGTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQTIPKPIGSKKTKTWSLSS*LTESPL Trigger: TAAAGGACTTTCAGTCAACCAACTAGATAATGACCA...AGTCTTTGTTTTCTTTGAACCTATGGGTTTTGGGATTGTTTGTTTACTGTTGTC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
||
| CDS-3UTR CAA 90 bp | TATGCGAGTGGCCTCAACTTTTCCATACCTATTGGCTATCTCTCTGTACGGCTTCTATACTCCCGGGAGTaGAGACTAGCAGTGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YASGLNFSIPIGYLSVRLLYSRE*RLAVFF Trigger: AAAGAACACTGCTAGTCTCAACTCCCGGGAGTATAG...AAGCCGTACAGAGAGATAGCCAATAGGTATGGAAAAGTTGAGGCCACTCGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
||
| CDS TCA 90 bp | GTGAATTGTCTACCTGGCCTAATTCAGCAGCATACGCAGGGTTTATaGCATTTGTCTTTATCCGTTCAAGGGGAGAAGGTCGGAATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VNCLPGLIQQHTQGL*HLSLSVQGEKVGIK Trigger: CTTTATTCCGACCTTCTCCCCTTGAACGGATAAAGACAAATGTCATAAACCCTGCGTATGCTGCTGAATTAGGCCAGGTAGACAATTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000200386.5 ENSMUST00000200577.5 |
||
| CDS GCA 90 bp | AGTCATCAACCCACTGTCGTTCTTTGTCTTCCACAACGCTGCTCATaGTTCGCTGCCATTTTTCCTGTTTGGGAATTTGGATTTTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SHQPTVVLCLPQRCS*FAAIFPVWEFGFLS Trigger: ACTCAAAAATCCAAATTCCCAAACAGGAAAAATGGCAGCGAAGCATGAGCAGCGTTGTGGAAGACAAAGAACGACAGTGGGTTGATGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000200577.5 |
||
| CDS CCA 90 bp | GGACTTAGCTCTATACTCCCGGGAGTTGAGACTAGCAGTGTTCTTTaGACGAATAACTGCAACGTAAGCATCTTCGATGTTTTCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: GLSSILPGVETSSVL*TNNCNVSIFDVFWI Trigger: AATCCAGAAAACATCGAAGATGCTTACGTTGCAGTTATTCGTCCAAAGAACACTGCTAGTCTCAACTCCCGGGAGTATAGAGCTAAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000198079.2 ENSMUST00000200386.5 ENSMUST00000200577.5 |
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| CDS GCA 90 bp | ATACTCCCGGGAGTTGAGACTAGCAGTGTTCTTTGGACGAATAACTaGAACGTAAGCATCTTCGATGTTTTCTGGATTTCCCATTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: ILPGVETSSVLWTNN*NVSIFDVFWISHCF Trigger: AAAGCAATGGGAAATCCAGAAAACATCGAAGATGCTTACGTTGCAGTTATTCGTCCAAAGAACACTGCTAGTCTCAACTCCCGGGAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198079.2 |
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| CDS CCA 90 bp | CAGCACCACTCGTTTCCCTTTAATCCCCTGGTTTGCAGGAGAAATTaGTTTGGTAGTTTCTACTACATAGTCCAATATGCCTTGTGCTAT | + |
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Preference number: 5 (lower is better) Translates to: QHHSFPFNPLVCRRN*FGSFYYIVQYALCY Trigger: ATAGCACAAGGCATATTGGACTATGTAGTAGAAACTACCAAACCAATTTCTCCTGCAAACCAGGGGATTAAAGGGAAACGAGTGGTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000198079.2 ENSMUST00000200386.5 ENSMUST00000200577.5 |
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| CDS-3UTR CAA 90 bp | AGAGAGCCGCATTCCCTCCATTATCTGCTGTGCTGTGGTATTATTGCCATGCTTCTTTATCTACCCGATTaGTATACTGAAGATCTGATC | + |
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Preference number: 5 (lower is better) Translates to: REPHSLHYLLCCGIIAMLLYLPD*YTEDLI Trigger: GATCAGATCTTCAGTATACAAATCGGGTAGATAAAG...AAGCATGGCAATAATACCACAGCACAGCAGATAATGGAGGGAATGCGGCTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| CDS-3UTR CAA 90 bp | ATTTCCTTACTGACGCCCTCACTCAGACTCAGATTCTTGTACTCATGGAGTATTTGGGAATTTGGATTTTaGAGTAGTCTGGAGCTCCGA | + |
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Preference number: 5 (lower is better) Translates to: ISLLTPSLRLRFLYSWSIWEFGF*SSLELR Trigger: TCGGAGCTCCAGACTACTCAAAAATCCAAATTCCCA...AATACTCCATGAGTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| CDS TCA 90 bp | AGCAGCTTTACCACAAGGCCAGCCTTAGTTTCCATGTTCAGGAGATaGAGTCCTTTTATATTCACTCCTACATACACAGGGATGACTTTA | + |
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Preference number: 5 (lower is better) Translates to: SSFTTRPALVSMFRR*SPFIFTPTYTGMTL Trigger: TAAAGTCATCCCTGTGTATGTAGGAGTGAATATAAAAGGACTTCATCTCCTGAACATGGAAACTAAGGCTGGCCTTGTGGTAAAGCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| CDS TCA 90 bp | AGCATGCATAATGAATGGGTGCCCAGTGGTCATTATCTAGTTGGTTaGCTGAAAGTCCTTTATCGAGAAGATGGCTCAGTAATTCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: SMHNEWVPSGHYLVG*LKVLYREDGSVILN Trigger: ATTCAGAATTACTGAGCCATCTTCTCGATAAAGGACTTTCAGTCAACCAACTAGATAATGACCACTGGGCACCCATTCATTATGCATGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000200577.5 |
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| CDS CCA 90 bp | TTAAAAGGTTTGGATTGCACTTTCCTTTCTCTAATAATATGCGAGTaGCCTCAACTTTTCCATACTTGTCTTCCACAACGCTGCTCATGC | + |
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Preference number: 5 (lower is better) Translates to: LKGLDCTFLSLIICE*PQLFHTCLPQRCSC Trigger: GCATGAGCAGCGTTGTGGAAGACAAGTATGGAAAAGTTGAGGCCACTCGCATATTATTAGAGAAAGGAAAGTGCAATCCAAACCTTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200386.5 |
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| CDS-3UTR CAA 90 bp | GGCAAACATAATACAGAAGGCATTACCATACCCAGTGTCTTAGTTATTGTTCTACTATACTCCCGGGAGTaGAGACTAGCAGTGTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: GKHNTEGITIPSVLVIVLLYSRE*RLAVFF Trigger: AAAGAACACTGCTAGTCTCAACTCCCGGGAGTATAG...TAGAACAATAACTAAGACACTGGGTATGGTAATGCCTTCTGTATTATGTTTGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| CDS-3UTR CAA 90 bp | ATTTCCTTACTGACGCCCTCACTCAGACTCAGATTCTTGTACTCATGGAGTATTATAGTCCAATATGCCTaGTGCTATTTCACTGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: ISLLTPSLRLRFLYSWSIIVQYA*CYFTVA Trigger: AGCAACAGTGAAATAGCACAAGGCATATTGGACTAT...AATACTCCATGAGTACAAGAATCTGAGTCTGAGTGAGGGCGTCAGTAAGGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200577.5 |
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| CDS-3UTR CAA 90 bp | AATAGACAGGACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAATGGGAATTTGGATTTTaGAGTAGTCTGGAGCTCCGA | + |
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Preference number: 5 (lower is better) Translates to: NRQDQCYSNQNSHAILTEWEFGF*SSLELR Trigger: TCGGAGCTCCAGACTACTCAAAAATCCAAATTCCCA...TTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTCCTGTCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| CDS-3UTR CAA 90 bp | GACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAAACTGAAAAATGGGGATCTTCCTTGTaGATCTGTTATGTGCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: DQCYSNQNSHAILTETEKWGSSL*ICYVPV Trigger: GACAGGCACATAACAGATCAACAAGGAAGATCCCCA...TTTTTCAGTTTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| CDS GCA 90 bp | CCCGATTTGTATACTGAAGATCTGATCCAAACAAAGGGTTGTAAATaGAGGTGTCTGCTTTCTCTAGGGCTAGCATTTTACTCTTTATTT | + |
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Preference number: 5 (lower is better) Translates to: PDLYTEDLIQTKGCK*RCLLSLGLAFYSLF Trigger: AAATAAAGAGTAAAATGCTAGCCCTAGAGAAAGCAGACACCTGCATTTACAACCCTTTGTTTGGATCAGATCTTCAGTATACAAATCGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000200386.5 ENSMUST00000200577.5 |
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| CDS-3UTR CAA 90 bp | GGCAAACATAATACAGAAGGCATTACCATACCCAGTGTCTTAGTTATTGTTCTACCCATATGTAGTGAATaGTCTACCTGGCCTAATTCA | + |
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Preference number: 5 (lower is better) Translates to: GKHNTEGITIPSVLVIVLPICSE*STWPNS Trigger: TGAATTAGGCCAGGTAGACAATTCACTACATATGGG...TAGAACAATAACTAAGACACTGGGTATGGTAATGCCTTCTGTATTATGTTTGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| CDS-3UTR CAA 90 bp | ACCAACTGGGAATCAAACATTCAAACTTGTGAGTCAAAGGGGCTATTTTCATTCGCCCATTTAAAAGGTTaGGATTGCACTTTCCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: TNWESNIQTCESKGLFSFAHLKG*DCTFLS Trigger: AGAAAGGAAAGTGCAATCCAAACCTTTTAAATGGGC...GAATGAAAATAGCCCCTTTGACTCACAAGTTTGAATGTTTGATTCCCAGTTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| CDS-3UTR CAA 90 bp | AATAGACAGGACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAATGGCCAGTCATGAACTaGTTGCAAGGGTTTATGATA | + |
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Preference number: 5 (lower is better) Translates to: NRQDQCYSNQNSHAILTEWPVMN*LQGFMI Trigger: TATCATAAACCCTTGCAACAAGTTCATGACTGGCCA...TTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTCCTGTCTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| CDS TCA 90 bp | CACTTATCCAAGGCTATTAACATCCTTGCTGTAAGTGTTGCAAAGTaGGTACTGGATTCACTACAAACTCTCATAATATCTTGTAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: HLSKAINILAVSVAK*VLDSLQTLIISCKQ Trigger: CTGCTTACAAGATATTATGAGAGTTTGTAGTGAATCCAGTACTCACTTTGCAACACTTACAGCAAGGATGTTAATAGCCTTGGATAAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000200386.5 ENSMUST00000200577.5 |
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| CDS-3UTR CAA 90 bp | GGCAAACATAATACAGAAGGCATTACCATACCCAGTGTCTTAGTTATTGTTCTACGTCTTTCAACAATTTaGCAGCTTCTTCCCAGTTAT | + |
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Preference number: 5 (lower is better) Translates to: GKHNTEGITIPSVLVIVLRLSTI*QLLPSY Trigger: ATAACTGGGAAGAAGCTGCAAAATTGTTGAAAGACG...TAGAACAATAACTAAGACACTGGGTATGGTAATGCCTTCTGTATTATGTTTGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| CDS-3UTR CAA 90 bp | GACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAAACTGAAAAACCAGTCATGAACTTGTaGCAAGGGTTTATGATAAGG | + |
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Preference number: 5 (lower is better) Translates to: DQCYSNQNSHAILTETEKPVMNL*QGFMIR Trigger: CCTTATCATAAACCCTTGCAACAAGTTCATGACTGG...TTTTTCAGTTTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| CDS-3UTR CAA 90 bp | GACCAATGCTATTCCAATCAAAATTCTCATGCCATACTCACAGAAACTGAAAAAATAGTCCAATATGCCTaGTGCTATTTCACTGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: DQCYSNQNSHAILTETEKIVQYA*CYFTVA Trigger: AGCAACAGTGAAATAGCACAAGGCATATTGGACTAT...TTTTTCAGTTTCTGTGAGTATGGCATGAGAATTTTGATTGGAATAGCATTGGTC 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| CDS-3UTR CAA 90 bp | GCAAATGAAAATGAAAACTTTGGTAAGAGGAAGAGGAACATCTCATTGATGGTGCTTTATCTACCCGATTaGTATACTGAAGATCTGATC | + |
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Preference number: 5 (lower is better) Translates to: ANENENFGKRKRNISLMVLYLPD*YTEDLI Trigger: GATCAGATCTTCAGTATACAAATCGGGTAGATAAAG...CACCATCAATGAGATGTTCCTCTTCCTCTTACCAAAGTTTTCATTTTCATTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| CDS-3UTR CAA 90 bp | CATTACCATACCCAGTGTCTTAGTTATTGTTCTACTACAGTGAAGAGATACCATACTTTTTCATATGGCTaGTTAATGGCGTCTTTCAAC | + |
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Preference number: 5 (lower is better) Translates to: HYHTQCLSYCSTTVKRYHTFSYG*LMASFN Trigger: GTTGAAAGACGCCATTAACAAGCCATATGAAAAAGT...ATGGTATCTCTTCACTGTAGTAGAACAATAACTAAGACACTGGGTATGGTAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171023.8 |
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| CDS GCA 72 bp | CCCACTGTCGTTCTTTGTCTTCCACAACGCTGCTCATaGTTCGCTGCCATTTTTCCTGTTTGGGAATTTGGA | + |
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Preference number: 6 (lower is better) Translates to: PTVVLCLPQRCS*FAAIFPVWEFG Trigger: TCCAAATTCCCAAACAGGAAAAATGGCAGCGAAGCATGAGCAGCGTTGTGGAAGACAAAGAACGACAGTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000200577.5 |
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| CDS GCA 72 bp | CATCAACCCACTGTCGTTCTTTGTCTTCCACAACGCTaGTCATGCTTCGCTGCCATTTTTCCTGTTTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: HQPTVVLCLPQR*SCFAAIFPVWE Trigger: TTCCCAAACAGGAAAAATGGCAGCGAAGCATGAGCAGCGTTGTGGAAGACAAAGAACGACAGTGGGTTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000200577.5 |
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| CDS CAA 72 bp | CGATGTAAAGGAAAGTCATCAACCCACTGTCGTTCTTaGTCTTCCACAACGCTGCTCATGCTTCGCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: RCKGKSSTHCRS*SSTTLLMLRCH Trigger: ATGGCAGCGAAGCATGAGCAGCGTTGTGGAAGACAAAGAACGACAGTGGGTTGATGACTTTCCTTTACATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000200577.5 |
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| CDS GCA 72 bp | CAACTTTTCCATACTTGTCTTCCACAACGCTGCTCATaGTTCGCTGCCATTTTTCCTGTTTGGGAATTTGGA | + |
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Preference number: 6 (lower is better) Translates to: QLFHTCLPQRCS*FAAIFPVWEFG Trigger: TCCAAATTCCCAAACAGGAAAAATGGCAGCGAAGCATGAGCAGCGTTGTGGAAGACAAGTATGGAAAAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200386.5 |
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| CDS TCA 72 bp | AATGAATGGGTGCCCAGTGGTCATTATCTAGTTGGTTaGCTGAAAGTCCTTTATCGAGAAGATGGCTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: NEWVPSGHYLVG*LKVLYREDGSV Trigger: TACTGAGCCATCTTCTCGATAAAGGACTTTCAGTCAACCAACTAGATAATGACCACTGGGCACCCATTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000200577.5 |
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| CDS GCA 72 bp | GGAGTTGAGACTAGCAGTGTTCTTTGGACGAATAACTaGAACGTAAGCATCTTCGATGTTTTCTGGATTTCC | + |
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Preference number: 6 (lower is better) Translates to: GVETSSVLWTNN*NVSIFDVFWIS Trigger: GGAAATCCAGAAAACATCGAAGATGCTTACGTTGCAGTTATTCGTCCAAAGAACACTGCTAGTCTCAACTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000198079.2 ENSMUST00000200386.5 ENSMUST00000200577.5 |
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| CDS CCA 72 bp | TCGTTTCCCTTTAATCCCCTGGTTTGCAGGAGAAATTaGTTTGGTAGTTTCTACTACATAGTCCAATATGCC | + |
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Preference number: 6 (lower is better) Translates to: SFPFNPLVCRRN*FGSFYYIVQYA Trigger: GGCATATTGGACTATGTAGTAGAAACTACCAAACCAATTTCTCCTGCAAACCAGGGGATTAAAGGGAAACGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000198079.2 ENSMUST00000200386.5 ENSMUST00000200577.5 |
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| CDS TCA 72 bp | TACCACTTTATCTACCCGATTTGTATACTGAAGATCTaGTCCAAACAAAGGGTTGTAAATGCAGGTGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: YHFIYPICILKI*SKQRVVNAGVC Trigger: GCAGACACCTGCATTTACAACCCTTTGTTTGGATCAGATCTTCAGTATACAAATCGGGTAGATAAAGTGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000200386.5 ENSMUST00000200577.5 |
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| CDS GCA 72 bp | TATACTGAAGATCTGATCCAAACAAAGGGTTGTAAATaGAGGTGTCTGCTTTCTCTAGGGCTAGCATTTTAC | + |
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Preference number: 6 (lower is better) Translates to: YTEDLIQTKGCK*RCLLSLGLAFY Trigger: GTAAAATGCTAGCCCTAGAGAAAGCAGACACCTGCATTTACAACCCTTTGTTTGGATCAGATCTTCAGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000200386.5 ENSMUST00000200577.5 |
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| CDS CAA 90 bp | AGGAGAAATTGGTTTGGTAGTTTCTACTACATAGTCCAATATGCCTaGTGCTATTTCACTGTTGCTTTGAAGTTTAGTTTCCAGCAAAAC | + |
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Preference number: 6 (lower is better) Translates to: RRNWFGSFYYIVQYA*CYFTVALKFSFQQN Trigger: GTTTTGCTGGAAACTAAACTTCAAAGCAACAGTGAAATAGCACAAGGCATATTGGACTATGTAGTAGAAACTACCAAACCAATTTCTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000198079.2 ENSMUST00000200386.5 ENSMUST00000200577.5 |
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| CDS CAA 72 bp | TGGTTTGGTAGTTTCTACTACATAGTCCAATATGCCTaGTGCTATTTCACTGTTGCTTTGAAGTTTAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: WFGSFYYIVQYA*CYFTVALKFSF Trigger: GAAACTAAACTTCAAAGCAACAGTGAAATAGCACAAGGCATATTGGACTATGTAGTAGAAACTACCAAACCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080085.9 ENSMUST00000171023.8 ENSMUST00000198079.2 ENSMUST00000200386.5 ENSMUST00000200577.5 |
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