Pregenerated sensors for KREMEN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040680Ensembl transcript IDs: ENSMUST00000046525.10
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGACCGAGCTGCTTTTAAAGGGGCACAAGGTCGAGGTAGGGTGCTaGATAATATCTCGGGTGTCCATCTCGCTGGCAGAAGTGGTGATG | + |
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Preference number: 1 (lower is better) Translates to: ETELLLKGHKVEVGC*IISRVSISLAEVVM Trigger: CATCACCACTTCTGCCAGCGAGATGGACACCCGAGATATTATGCAGCACCCTACCTCGACCTTGTGCCCCTTTAAAAGCAGCTCGGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| 3UTR GCA 90 bp | TCAGAGACCGAGCTGCTTTTAAAGGGGCACAAGGTCGAGGTAGGGTaGTGCATAATATCTCGGGTGTCCATCTCGCTGGCAGAAGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: SETELLLKGHKVEVG*CIISRVSISLAEVV Trigger: CACCACTTCTGCCAGCGAGATGGACACCCGAGATATTATGCAGCACCCTACCTCGACCTTGTGCCCCTTTAAAAGCAGCTCGGTCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| 3UTR TCA 90 bp | AATAGCACTGGATGCTTCCTGTCCGATCTTCTGGTCTTCCCGAGATaGTCAGAGACCGAGCTGCTTTTAAAGGGGCACAAGGTCGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: NSTGCFLSDLLVFPR*SETELLLKGHKVEV Trigger: TACCTCGACCTTGTGCCCCTTTAAAAGCAGCTCGGTCTCTGATCATCTCGGGAAGACCAGAAGATCGGACAGGAAGCATCCAGTGCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| 3UTR TCA 90 bp | GCAAAGAACCCTGAAACCAAACACCACCCATCACATCAAGGTCCATaGATTAGGGTGTTGGATTCCCTTTGTCCTTTGGCTTCAGTCATC | + |
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Preference number: 1 (lower is better) Translates to: AKNPETKHHPSHQGP*IRVLDSLCPLASVI Trigger: GATGACTGAAGCCAAAGGACAAAGGGAATCCAACACCCTAATTCATGGACCTTGATGTGATGGGTGGTGTTTGGTTTCAGGGTTCTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| 3UTR-3UTR CCA 90 bp | CCTTTCATCGAGGGCAGCAGTCCAGGACCATCCCCAAAAGAGGCGCAAAGAACCTTGGCTTCAGTCATCTaGACCCCAAGGGTCAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PFIEGSSPGPSPKEAQRTLASVI*TPRVRP Trigger: TGGCCTGACCCTTGGGGTCCAGATGACTGAAGCCAA...GGTTCTTTGCGCCTCTTTTGGGGATGGTCCTGGACTGCTGCCCTCGATGAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| 3UTR-3UTR CCA 90 bp | TTTAGATCACTTTTGTTGGCCCCTAACCTTTCATCGAGGGCAGCAGTCCAGGACCATGAATTAGGGTGTTaGATTCCCTTTGTCCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: FRSLLLAPNLSSRAAVQDHELGC*IPFVLW Trigger: CCAAAGGACAAAGGGAATCCAACACCCTAATTCATG...GTCCTGGACTGCTGCCCTCGATGAAAGGTTAGGGGCCAACAAAAGTGATCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| 3UTR GCA 72 bp | TTTGTAGACCAGGCTGGCCAGAAATCCTCCTGCCTCTaGCTCCCGAGTGCTGGGACTAAAGGCATGCGCCAC | + |
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Preference number: 3 (lower is better) Translates to: FVDQAGQKSSCL*LPSAGTKGMRH Trigger: GTGGCGCATGCCTTTAGTCCCAGCACTCGGGAGGCAGAGGCAGGAGGATTTCTGGCCAGCCTGGTCTACAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| 3UTR CCA 72 bp | CATGCGCCACCACGCCCGGCTTTAGATCACTTTTGTTaGCCCCTAACCTTTCATCGAGGGCAGCAGTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: HAPPRPALDHFC*PLTFHRGQQSR Trigger: CCTGGACTGCTGCCCTCGATGAAAGGTTAGGGGCCAACAAAAGTGATCTAAAGCCGGGCGTGGTGGCGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| 3UTR GCA 72 bp | GAGCTGCTTTTAAAGGGGCACAAGGTCGAGGTAGGGTaGTGCATAATATCTCGGGTGTCCATCTCGCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: ELLLKGHKVEVG*CIISRVSISLA Trigger: TGCCAGCGAGATGGACACCCGAGATATTATGCAGCACCCTACCTCGACCTTGTGCCCCTTTAAAAGCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| 3UTR TCA 72 bp | GTCCAGGACCATCCCCAAAAGAGGCGCAAAGAACCCTaGAACCAAACACCACCCATCACATCAAGGTCCATG | + |
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Preference number: 3 (lower is better) Translates to: VQDHPQKRRKEP*NQTPPITSRSM Trigger: CATGGACCTTGATGTGATGGGTGGTGTTTGGTTTCAGGGTTCTTTGCGCCTCTTTTGGGGATGGTCCTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| 3UTR GCA 72 bp | CTGCTTTTAAAGGGGCACAAGGTCGAGGTAGGGTGCTaGATAATATCTCGGGTGTCCATCTCGCTGGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: LLLKGHKVEVGC*IISRVSISLAE Trigger: TTCTGCCAGCGAGATGGACACCCGAGATATTATGCAGCACCCTACCTCGACCTTGTGCCCCTTTAAAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| 3UTR CCA 72 bp | TCCCAAATAGCACTGGATGCTTCCTGTCCGATCTTCTaGTCTTCCCGAGATGATCAGAGACCGAGCTGCTTT | + |
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Preference number: 3 (lower is better) Translates to: SQIALDASCPIF*SSRDDQRPSCF Trigger: AAAGCAGCTCGGTCTCTGATCATCTCGGGAAGACCAGAAGATCGGACAGGAAGCATCCAGTGCTATTTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| 3UTR CCA 72 bp | GTGTTGGATTCCCTTTGTCCTTTGGCTTCAGTCATCTaGACCCCAAGGGTCAGGCCAAGTTCCCAAATAGCA | + |
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Preference number: 3 (lower is better) Translates to: VLDSLCPLASVI*TPRVRPSSQIA Trigger: TGCTATTTGGGAACTTGGCCTGACCCTTGGGGTCCAGATGACTGAAGCCAAAGGACAAAGGGAATCCAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR TCA 90 bp | CCTTTCATCGAGGGCAGCAGTCCAGGACCATCCCCAAAAGAGGCGCAAAGAACCAACCCCCAGCGGCCCTaGGGGTCGCTGGCGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PFIEGSSPGPSPKEAQRTNPQRP*GSLALL Trigger: CAGCAGCGCCAGCGACCCTCAGGGCCGCTGGGGGTT...GGTTCTTTGCGCCTCTTTTGGGGATGGTCCTGGACTGCTGCCCTCGATGAAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR TCA 90 bp | GCACTGGATGCTTCCTGTCCGATCTTCTGGTCTTCCCGAGATGATCAGAGACCGGTGCAGGCTCCCTGCTaGGGCCCCGTGCAGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: ALDASCPIFWSSRDDQRPVQAPC*GPVQPQ Trigger: CTGCGGCTGCACGGGGCCTCAGCAGGGAGCCTGCAC...CGGTCTCTGATCATCTCGGGAAGACCAGAAGATCGGACAGGAAGCATCCAGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR TCA 90 bp | CAGTCCAGGACCATCCCCAAAAGAGGCGCAAAGAACCCTGAAACCAAACACCACTGCCACTGGGACCACTaGGAGCAGGGGGTGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: QSRTIPKRGAKNPETKHHCHWDH*EQGVPQ Trigger: CTGGGGCACCCCCTGCTCTCAGTGGTCCCAGTGGCA...GTGGTGTTTGGTTTCAGGGTTCTTTGCGCCTCTTTTGGGGATGGTCCTGGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR GCA 90 bp | GGGCACAAGGTCGAGGTAGGGTGCTGCATAATATCTCGGGTGTCCATCTCGCTGGAGGGTCGCTGGCGCTaGTGTAGCTGTGCTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GHKVEVGCCIISRVSISLEGRWR*CSCAAV Trigger: CACAGCAGCACAGCTACAGCAGCGCCAGCGACCCTC...CAGCGAGATGGACACCCGAGATATTATGCAGCACCCTACCTCGACCTTGTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | ATAGCACTGGATGCTTCCTGTCCGATCTTCTGGTCTTCCCGAGATGATCAGAGAGTCGGTGGCAGGGGCTaGACGTCCGCGGGCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: IALDASCPIFWSSRDDQRVGGRG*TSAGQV Trigger: GACCTGGCCCGCGGACGTCCAGCCCCTGCCACCGAC...TCTCTGATCATCTCGGGAAGACCAGAAGATCGGACAGGAAGCATCCAGTGCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | ATCTGGACCCCAAGGGTCAGGCCAAGTTCCCAAATAGCACTGGATGCTTCCTGTAGCCTGAGAGTCCCCTaGGGGACAGGGCAGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: IWTPRVRPSSQIALDASCSLRVP*GTGQGH Trigger: GTGGCCCTGCCCTGTCCCCCAGGGGACTCTCAGGCT...ACAGGAAGCATCCAGTGCTATTTGGGAACTTGGCCTGACCCTTGGGGTCCAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR TCA 90 bp | TGTCCTTTGGCTTCAGTCATCTGGACCCCAAGGGTCAGGCCAAGTTCCCAAATACGTCGCTGCGGAAGGTaGGCAGCAGCGCAGCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: CPLASVIWTPRVRPSSQIRRCGR*AAAQQC Trigger: GCACTGCTGCGCTGCTGCTCACCTTCCGCAGCGACG...TATTTGGGAACTTGGCCTGACCCTTGGGGTCCAGATGACTGAAGCCAAAGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR TCA 90 bp | AGTCCAGGACCATCCCCAAAAGAGGCGCAAAGAACCCTGAAACCAAACACCACCGCAGCCCGCGGTAGGTaGGCGCGAAGCCTTGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SPGPSPKEAQRTLKPNTTAARGR*ARSLEH Trigger: ATGCTCAAGGCTTCGCGCTCACCTACCGCGGGCTGC...GGTGGTGTTTGGTTTCAGGGTTCTTTGCGCCTCTTTTGGGGATGGTCCTGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR GCA 90 bp | GCACAAGGTCGAGGTAGGGTGCTGCATAATATCTCGGGTGTCCATCTCGCTGGCACCTATCGAAGCCTGTaGAGCTCCGGGCTTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AQGRGRVLHNISGVHLAGTYRSL*SSGLGA Trigger: AGCCCCAAGCCCGGAGCTGCACAGGCTTCGATAGGT...GCCAGCGAGATGGACACCCGAGATATTATGCAGCACCCTACCTCGACCTTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | GCACAAGGTCGAGGTAGGGTGCTGCATAATATCTCGGGTGTCCATCTCGCTGGCGCATTCGGACAAGCCTaGACTGTGCAGGCTCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: AQGRGRVLHNISGVHLAGAFGQA*TVQAPC Trigger: GCAGGGAGCCTGCACAGTCCAGGCTTGTCCGAATGC...GCCAGCGAGATGGACACCCGAGATATTATGCAGCACCCTACCTCGACCTTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | CAGTCCAGGACCATCCCCAAAAGAGGCGCAAAGAACCCTGAAACCAAACACCACGGCCCTGAGGGTCGCTaGCGCTGCTGTAGCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: QSRTIPKRGAKNPETKHHGPEGR*RCCSCA Trigger: AGCACAGCTACAGCAGCGCCAGCGACCCTCAGGGCC...GTGGTGTTTGGTTTCAGGGTTCTTTGCGCCTCTTTTGGGGATGGTCCTGGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | GGTAGGGTGCTGCATAATATCTCGGGTGTCCATCTCGCTGGCAGAAGTGGTGATTCTGGTCACAGTCGGTaGCAGGGGCTGGACGTCCGC | + |
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Preference number: 4 (lower is better) Translates to: GRVLHNISGVHLAGRSGDSGHSR*QGLDVR Trigger: GCGGACGTCCAGCCCCTGCCACCGACTGTGACCAGA...ATCACCACTTCTGCCAGCGAGATGGACACCCGAGATATTATGCAGCACCCTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | CCTTTCATCGAGGGCAGCAGTCCAGGACCATCCCCAAAAGAGGCGCAAAGAACCCCCGGGAAGGTCCCATaGCCAGAGACCCTTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: PFIEGSSPGPSPKEAQRTPGKVP*PETLFL Trigger: CAGGAAAAGGGTCTCTGGCCATGGGACCTTCCCGGG...GGTTCTTTGCGCCTCTTTTGGGGATGGTCCTGGACTGCTGCCCTCGATGAAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR TCA 90 bp | CCTTTCATCGAGGGCAGCAGTCCAGGACCATCCCCAAAAGAGGCGCAAAGAACCGGCACACTTGGACAGTaGGCTTTGTGGAGGTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PFIEGSSPGPSPKEAQRTGTLGQ*ALWRCH Trigger: GTGGCACCTCCACAAAGCTCACTGTCCAAGTGTGCC...GGTTCTTTGCGCCTCTTTTGGGGATGGTCCTGGACTGCTGCCCTCGATGAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR GCA 90 bp | ATCTGGACCCCAAGGGTCAGGCCAAGTTCCCAAATAGCACTGGATGCTTCCTGTGACAAGCCTGGACTGTaGAGGCTCCCTGCTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: IWTPRVRPSSQIALDASCDKPGL*RLPAEA Trigger: GGCCTCAGCAGGGAGCCTGCACAGTCCAGGCTTGTC...ACAGGAAGCATCCAGTGCTATTTGGGAACTTGGCCTGACCCTTGGGGTCCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| 3UTR CAA 72 bp | GCATGCGCCACCACGCCCGGCTTTAGATCACTTTTGTaGGCCCCTAACCTTTCATCGAGGGCAGCAGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ACATTPGFRSLL*APNLSSRAAVQ Trigger: CTGGACTGCTGCCCTCGATGAAAGGTTAGGGGCCAACAAAAGTGATCTAAAGCCGGGCGTGGTGGCGCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR GCA 90 bp | ATCTGGACCCCAAGGGTCAGGCCAAGTTCCCAAATAGCACTGGATGCTTCCTGTGCCCTCTTCTGTCTCTaGCACGTAGCACCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: IWTPRVRPSSQIALDASCALFCL*HVAPGL Trigger: CAGCCCTGGTGCTACGTGGCAGAGACAGAAGAGGGC...ACAGGAAGCATCCAGTGCTATTTGGGAACTTGGCCTGACCCTTGGGGTCCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR GCA 90 bp | ATCAAGGTCCATGAATTAGGGTGTTGGATTCCCTTTGTCCTTTGGCTTCAGTCAGCAGCAGCGCAGCAGTaGGCAGGCGCAGCGGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: IKVHELGCWIPFVLWLQSAAAQQ*AGAAVP Trigger: CGGGACCGCTGCGCCTGCGCACTGCTGCGCTGCTGC...TGACTGAAGCCAAAGGACAAAGGGAATCCAACACCCTAATTCATGGACCTTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR GCA 90 bp | GCACAAGGTCGAGGTAGGGTGCTGCATAATATCTCGGGTGTCCATCTCGCTGGCCCTCTGGAGATGCTCTaGCCTCCACTGTATCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: AQGRGRVLHNISGVHLAGPLEML*PPLYPA Trigger: TGCAGGATACAGTGGAGGGCAGAGCATCTCCAGAGG...GCCAGCGAGATGGACACCCGAGATATTATGCAGCACCCTACCTCGACCTTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | CCTTTCATCGAGGGCAGCAGTCCAGGACCATCCCCAAAAGAGGCGCAAAGAACCTGGCCAAAACAGATCTaGTCACAGTCGGTGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PFIEGSSPGPSPKEAQRTWPKQI*SQSVAG Trigger: CCCTGCCACCGACTGTGACCAGATCTGTTTTGGCCA...GGTTCTTTGCGCCTCTTTTGGGGATGGTCCTGGACTGCTGCCCTCGATGAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | ATCTGGACCCCAAGGGTCAGGCCAAGTTCCCAAATAGCACTGGATGCTTCCTGTGCCGACCAGTTTCCCTaGCAGGAGCCCACAGACACT | + |
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Preference number: 4 (lower is better) Translates to: IWTPRVRPSSQIALDASCADQFP*QEPTDT Trigger: AGTGTCTGTGGGCTCCTGCCAGGGAAACTGGTCGGC...ACAGGAAGCATCCAGTGCTATTTGGGAACTTGGCCTGACCCTTGGGGTCCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | CCCAAGGGTCAGGCCAAGTTCCCAAATAGCACTGGATGCTTCCTGTCCGATCTTAGCACAGCGCCCAGTTaGCCCAATACCCAGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PKGQAKFPNSTGCFLSDLSTAPS*PNTQLQ Trigger: CTGCAGCTGGGTATTGGGCCAACTGGGCGCTGTGCT...AAGATCGGACAGGAAGCATCCAGTGCTATTTGGGAACTTGGCCTGACCCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| 3UTR CAA 72 bp | AAGGCATGCGCCACCACGCCCGGCTTTAGATCACTTTaGTTGGCCCCTAACCTTTCATCGAGGGCAGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: KACATTPGFRSL*LAPNLSSRAAV Trigger: GACTGCTGCCCTCGATGAAAGGTTAGGGGCCAACAAAAGTGATCTAAAGCCGGGCGTGGTGGCGCATGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR TCA 90 bp | TGTCCTTTGGCTTCAGTCATCTGGACCCCAAGGGTCAGGCCAAGTTCCCAAATACGAAGAGGCGGAAGGTaGGTTCTAGCACAGCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: CPLASVIWTPRVRPSSQIRRGGR*VLAQRP Trigger: TGGGCGCTGTGCTAGAACTCACCTTCCGCCTCTTCG...TATTTGGGAACTTGGCCTGACCCTTGGGGTCCAGATGACTGAAGCCAAAGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR TCA 90 bp | ATAGCACTGGATGCTTCCTGTCCGATCTTCTGGTCTTCCCGAGATGATCAGAGAGTGAGCGCGAAGCCTTaGGCATGGCCTCTTGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: IALDASCPIFWSSRDDQRVSAKP*AWPLAS Trigger: CGACGCAAGAGGCCATGCTCAAGGCTTCGCGCTCAC...TCTCTGATCATCTCGGGAAGACCAGAAGATCGGACAGGAAGCATCCAGTGCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | CCCAAGGGTCAGGCCAAGTTCCCAAATAGCACTGGATGCTTCCTGTCCGATCTTCAGAGACCCTTTTCCTaGAGCCAGCAGACAGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: PKGQAKFPNSTGCFLSDLQRPFS*SQQTAP Trigger: CGGAGCTGTCTGCTGGCTCCAGGAAAAGGGTCTCTG...AAGATCGGACAGGAAGCATCCAGTGCTATTTGGGAACTTGGCCTGACCCTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR TCA 90 bp | ATCAAGGTCCATGAATTAGGGTGTTGGATTCCCTTTGTCCTTTGGCTTCAGTCAGCAGGACCCTCAGCCTaGGAGTCCCCTGGGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: IKVHELGCWIPFVLWLQSAGPSA*ESPGGQ Trigger: CTGTCCCCCAGGGGACTCTCAGGCTGAGGGTCCTGC...TGACTGAAGCCAAAGGACAAAGGGAATCCAACACCCTAATTCATGGACCTTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | AGTCCAGGACCATCCCCAAAAGAGGCGCAAAGAACCCTGAAACCAAACACCACCTCAGCGCCGTTCACCTaGAAGCATTCGGACAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SPGPSPKEAQRTLKPNTTSAPFT*KHSDKP Trigger: AGGCTTGTCCGAATGCTTCCAGGTGAACGGCGCTGA...GGTGGTGTTTGGTTTCAGGGTTCTTTGCGCCTCTTTTGGGGATGGTCCTGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR GCA 90 bp | CCCAAGGGTCAGGCCAAGTTCCCAAATAGCACTGGATGCTTCCTGTCCGATCTTAGTAGCGCCAGTAGATaGCCTCTTCTGTCTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PKGQAKFPNSTGCFLSDLSSASR*PLLSLP Trigger: TGGCAGAGACAGAAGAGGGCATCTACTGGCGCTACT...AAGATCGGACAGGAAGCATCCAGTGCTATTTGGGAACTTGGCCTGACCCTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | GGTAGGGTGCTGCATAATATCTCGGGTGTCCATCTCGCTGGCAGAAGTGGTGATCTGTGCTGCTGTGTCTaGTCCCAGAAAAGACAAGGG | + |
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Preference number: 4 (lower is better) Translates to: GRVLHNISGVHLAGRSGDLCCCV*SQKRQG Trigger: CCCTTGTCTTTTCTGGGACCAGACACAGCAGCACAG...ATCACCACTTCTGCCAGCGAGATGGACACCCGAGATATTATGCAGCACCCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | CCTTTCATCGAGGGCAGCAGTCCAGGACCATCCCCAAAAGAGGCGCAAAGAACCAATCGAAGGCACACTTaGACAGTGAGCTTTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PFIEGSSPGPSPKEAQRTNRRHT*TVSFVE Trigger: CTCCACAAAGCTCACTGTCCAAGTGTGCCTTCGATT...GGTTCTTTGCGCCTCTTTTGGGGATGGTCCTGGACTGCTGCCCTCGATGAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | CAGGCCAAGTTCCCAAATAGCACTGGATGCTTCCTGTCCGATCTTCTGGTCTTCTCCACAGAGCTGGCCTaGGTGGCCAAAACAGATCTG | + |
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Preference number: 4 (lower is better) Translates to: QAKFPNSTGCFLSDLLVFSTELA*VAKTDL Trigger: CAGATCTGTTTTGGCCACCCAGGCCAGCTCTGTGGA...GAAGACCAGAAGATCGGACAGGAAGCATCCAGTGCTATTTGGGAACTTGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR GCA 90 bp | GGTAGGGTGCTGCATAATATCTCGGGTGTCCATCTCGCTGGCAGAAGTGGTGATCAGACACTTCATAGATaGCTAGTCGTCCATCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: GRVLHNISGVHLAGRSGDQTLHR*LVVHRL Trigger: GAGGCGATGGACGACTAGGCATCTATGAAGTGTCTG...ATCACCACTTCTGCCAGCGAGATGGACACCCGAGATATTATGCAGCACCCTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | ATAGCACTGGATGCTTCCTGTCCGATCTTCTGGTCTTCCCGAGATGATCAGAGACAGAGCTGGCCTGGGTaGCCAAAACAGATCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: IALDASCPIFWSSRDDQRQSWPG*PKQIWS Trigger: TGACCAGATCTGTTTTGGCCACCCAGGCCAGCTCTG...TCTCTGATCATCTCGGGAAGACCAGAAGATCGGACAGGAAGCATCCAGTGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | TGTCCTTTGGCTTCAGTCATCTGGACCCCAAGGGTCAGGCCAAGTTCCCAAATAGCTGCAGTTCCGGTCTaGTCCATACTCATCCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: CPLASVIWTPRVRPSSQIAAVPV*SILIRK Trigger: TTTCCGGATGAGTATGGACCAGACCGGAACTGCAGC...TATTTGGGAACTTGGCCTGACCCTTGGGGTCCAGATGACTGAAGCCAAAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | CAGTCCAGGACCATCCCCAAAAGAGGCGCAAAGAACCCTGAAACCAAACACCACCTGCACATCACCGTCTaGGTTCCTACAGAAGTTATG | + |
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Preference number: 4 (lower is better) Translates to: QSRTIPKRGAKNPETKHHLHITV*VPTEVM Trigger: CATAACTTCTGTAGGAACCCAGACGGTGATGTGCAG...GTGGTGTTTGGTTTCAGGGTTCTTTGCGCCTCTTTTGGGGATGGTCCTGGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CCA 90 bp | ATCAAGGTCCATGAATTAGGGTGTTGGATTCCCTTTGTCCTTTGGCTTCAGTCATCGCCTCCACAGAGCTaGCCTGGGTGGCCAAAACAG | + |
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Preference number: 4 (lower is better) Translates to: IKVHELGCWIPFVLWLQSSPPQS*PGWPKQ Trigger: CTGTTTTGGCCACCCAGGCCAGCTCTGTGGAGGCGA...TGACTGAAGCCAAAGGACAAAGGGAATCCAACACCCTAATTCATGGACCTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS GCA 90 bp | GTCCCGGAGGCGGCGGATGGGCGCCGTCGAAGGCACGGAGTAGGTTaGCGGACGAGACGTCGCGTAGCTCCAGCCGGTCTCGAGAATCAG | + |
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Preference number: 5 (lower is better) Translates to: VPEAADGRRRRHGVG*RTRRRVAPAGLENQ Trigger: CTGATTCTCGAGACCGGCTGGAGCTACGCGACGTCTCGTCCGGCAACCTACTCCGTGCCTTCGACGGCGCCCATCCGCCGCCTCCGGGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS GCA 90 bp | CTGCAGCCCGCGGTAGGTGAGCGCGAAGCCTTGAGCATGGCCTCTTaGGTCGCTGCGGAAGGTGAGCAGCAGCGCAGCAGTGCGCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: LQPAVGEREALSMAS*VAAEGEQQRSSAQA Trigger: CGCCTGCGCACTGCTGCGCTGCTGCTCACCTTCCGCAGCGACGCAAGAGGCCATGCTCAAGGCTTCGCGCTCACCTACCGCGGGCTGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS GCA 90 bp | GAAGGCCGTCACGGTGGAGAAGACTCGGGCACCTATCGAAGCCTGTaGAGCTCCGGGCTTGGGGCTGCAGCTCGCGTTAGCCCCATCGGG | + |
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Preference number: 5 (lower is better) Translates to: EGRHGGEDSGTYRSL*SSGLGAAARVSPIG Trigger: CCCGATGGGGCTAACGCGAGCTGCAGCCCCAAGCCCGGAGCTGCACAGGCTTCGATAGGTGCCCGAGTCTTCTCCACCGTGACGGCCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 90 bp | CGTCCATCGCCTCCACAGAGCTGGCCTGGGTGGCCAAAACAGATCTaGTCACAGTCGGTGGCAGGGGCTGGACGTCCGCGGGCCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: RPSPPQSWPGWPKQI*SQSVAGAGRPRARS Trigger: TGACCTGGCCCGCGGACGTCCAGCCCCTGCCACCGACTGTGACCAGATCTGTTTTGGCCACCCAGGCCAGCTCTGTGGAGGCGATGGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS TCA 90 bp | CTGGAGATGCTCTGCCCTCCACTGTATCCTGCAGCCCGCGGTAGGTaGGCGCGAAGCCTTGAGCATGGCCTCTTGCGTCGCTGCGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: LEMLCPPLYPAARGR*ARSLEHGLLRRCGR Trigger: CCTTCCGCAGCGACGCAAGAGGCCATGCTCAAGGCTTCGCGCTCACCTACCGCGGGCTGCAGGATACAGTGGAGGGCAGAGCATCTCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 90 bp | GCCTGGGTGGCCAAAACAGATCTGGTCACAGTCGGTGGCAGGGGCTaGACGTCCGCGGGCCAGGTCACTTTCAGAGCCACAGAAGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: AWVAKTDLVTVGGRG*TSAGQVTFRATEAG Trigger: GCCTGCTTCTGTGGCTCTGAAAGTGACCTGGCCCGCGGACGTCCAGCCCCTGCCACCGACTGTGACCAGATCTGTTTTGGCCACCCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 90 bp | CACAGAGCTGGCCTGGGTGGCCAAAACAGATCTGGTCACAGTCGGTaGCAGGGGCTGGACGTCCGCGGGCCAGGTCACTTTCAGAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: HRAGLGGQNRSGHSR*QGLDVRGPGHFQSH Trigger: GTGGCTCTGAAAGTGACCTGGCCCGCGGACGTCCAGCCCCTGCCACCGACTGTGACCAGATCTGTTTTGGCCACCCAGGCCAGCTCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS GCA 90 bp | AGTTATGCGCACCCAACCCCCAGCGGCCCTGAGGGTCGCTGGCGCTaGTGTAGCTGTGCTGCTGTGTCTGGTCCCAGAAAAGACAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SYAHPTPSGPEGRWR*CSCAAVSGPRKDKG Trigger: GCCCTTGTCTTTTCTGGGACCAGACACAGCAGCACAGCTACAGCAGCGCCAGCGACCCTCAGGGCCGCTGGGGGTTGGGTGCGCATAACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 90 bp | CTGCTGTGTCTGGTCCCAGAAAAGACAAGGGCGTCCAGCTCCGCGTaGGCCGGTGTAGTTCTGGTGGCCTCGGTAGTCAGCGCCGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: LLCLVPEKTRASSSA*AGVVLVASVVSAVH Trigger: GTGAACGGCGCTGACTACCGAGGCCACCAGAACTACACCGGCCCACGCGGAGCTGGACGCCCTTGTCTTTTCTGGGACCAGACACAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS GCA 90 bp | AGTGAGCTTTGTGGAGGTGCCACTGGGACCACTGAGAGCAGGGGGTaGCCCAGAGTCCACGAAGCAGCCCAGGTACCCAGGCATGTGACA | + |
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Preference number: 5 (lower is better) Translates to: SELCGGATGTTESRG*PRVHEAAQVPRHVT Trigger: TGTCACATGCCTGGGTACCTGGGCTGCTTCGTGGACTCTGGGGCACCCCCTGCTCTCAGTGGTCCCAGTGGCACCTCCACAAAGCTCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 90 bp | GTAGGGACAGGAGCAACAGCAGCAGCACAGAGAAGGCCGTCACGGTaGAGAAGACTCGGGCACCTATCGAAGCCTGTGCAGCTCCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: VGTGATAAAQRRPSR*RRLGHLSKPVQLRA Trigger: AGCCCGGAGCTGCACAGGCTTCGATAGGTGCCCGAGTCTTCTCCACCGTGACGGCCTTCTCTGTGCTGCTGCTGTTGCTCCTGTCCCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS GCA 90 bp | GAGCCGACCAGTTTCCCTGGCAGGAGCCCACAGACACTTCATAGATaGCTAGTCGTCCATCGCCTCCACAGAGCTGGCCTGGGTGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: EPTSFPGRSPQTLHR*LVVHRLHRAGLGGQ Trigger: TTGGCCACCCAGGCCAGCTCTGTGGAGGCGATGGACGACTAGGCATCTATGAAGTGTCTGTGGGCTCCTGCCAGGGAAACTGGTCGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 90 bp | TACAGAAGTTATGCGCACCCAACCCCCAGCGGCCCTGAGGGTCGCTaGCGCTGCTGTAGCTGTGCTGCTGTGTCTGGTCCCAGAAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: YRSYAHPTPSGPEGR*RCCSCAAVSGPRKD Trigger: GTCTTTTCTGGGACCAGACACAGCAGCACAGCTACAGCAGCGCCAGCGACCCTCAGGGCCGCTGGGGGTTGGGTGCGCATAACTTCTGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS TCA 90 bp | GCTCCAGCCGGTCTCGAGAATCAGCCAACTCGAAGAGGCGGAAGGTaGGTTCTAGCACAGCGCCCAGTTGGCCCAATACCCAGCTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: APAGLENQPTRRGGR*VLAQRPVGPIPSCS Trigger: ACTGCAGCTGGGTATTGGGCCAACTGGGCGCTGTGCTAGAACTCACCTTCCGCCTCTTCGAGTTGGCTGATTCTCGAGACCGGCTGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 90 bp | GCCAACTCGAAGAGGCGGAAGGTGAGTTCTAGCACAGCGCCCAGTTaGCCCAATACCCAGCTGCAGTTCCGGTCTGGTCCATACTCATCC | + |
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Preference number: 5 (lower is better) Translates to: ANSKRRKVSSSTAPS*PNTQLQFRSGPYSS Trigger: GGATGAGTATGGACCAGACCGGAACTGCAGCTGGGTATTGGGCCAACTGGGCGCTGTGCTAGAACTCACCTTCCGCCTCTTCGAGTTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS TCA 90 bp | AGTTCCGGTCTGGTCCATACTCATCCGGAAAATCCGGGGAGTAGATaGCTCCTTGAGGAGCCGACCAGTTTCCCTGGCAGGAGCCCACAG | + |
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Preference number: 5 (lower is better) Translates to: SSGLVHTHPENPGSR*LLEEPTSFPGRSPQ Trigger: CTGTGGGCTCCTGCCAGGGAAACTGGTCGGCTCCTCAAGGAGTCATCTACTCCCCGGATTTTCCGGATGAGTATGGACCAGACCGGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 90 bp | CCCCAGAGTCCACGAAGCAGCCCAGGTACCCAGGCATGTGACATGTaGGGATATCACAGTAGCGCCAGTAGATGCCCTCTTCTGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: PQSPRSSPGTQACDM*GYHSSASRCPLLSL Trigger: CAGAGACAGAAGAGGGCATCTACTGGCGCTACTGTGATATCCCCACATGTCACATGCCTGGGTACCTGGGCTGCTTCGTGGACTCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CAA 90 bp | TTTAGATCACTTTTGTTGGCCCCTAACCTTTCATCGAGGGCAGCAGTCCAGGACGGTGAGCGCGAAGCCTaGAGCATGGCCTCTTGCGTC | + |
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Preference number: 5 (lower is better) Translates to: FRSLLLAPNLSSRAAVQDGEREA*SMASCV Trigger: GACGCAAGAGGCCATGCTCAAGGCTTCGCGCTCACC...GTCCTGGACTGCTGCCCTCGATGAAAGGTTAGGGGCCAACAAAAGTGATCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS-3UTR CAA 90 bp | GCACTGGATGCTTCCTGTCCGATCTTCTGGTCTTCCCGAGATGATCAGAGACCGGAATCGAAGGCACACTaGGACAGTGAGCTTTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: ALDASCPIFWSSRDDQRPESKAH*DSELCG Trigger: TCCACAAAGCTCACTGTCCAAGTGTGCCTTCGATTC...CGGTCTCTGATCATCTCGGGAAGACCAGAAGATCGGACAGGAAGCATCCAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS GCA 72 bp | GCGGCGGATGGGCGCCGTCGAAGGCACGGAGTAGGTTaGCGGACGAGACGTCGCGTAGCTCCAGCCGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: AADGRRRRHGVG*RTRRRVAPAGL Trigger: GAGACCGGCTGGAGCTACGCGACGTCTCGTCCGGCAACCTACTCCGTGCCTTCGACGGCGCCCATCCGCCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CAA 72 bp | GGCGGCGGATGGGCGCCGTCGAAGGCACGGAGTAGGTaGCCGGACGAGACGTCGCGTAGCTCCAGCCGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GGGWAPSKARSR*PDETSRSSSRS Trigger: AGACCGGCTGGAGCTACGCGACGTCTCGTCCGGCAACCTACTCCGTGCCTTCGACGGCGCCCATCCGCCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CAA 90 bp | GGTCCCGGAGGCGGCGGATGGGCGCCGTCGAAGGCACGGAGTAGGTaGCCGGACGAGACGTCGCGTAGCTCCAGCCGGTCTCGAGAATCA | + |
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Preference number: 6 (lower is better) Translates to: GPGGGGWAPSKARSR*PDETSRSSSRSRES Trigger: TGATTCTCGAGACCGGCTGGAGCTACGCGACGTCTCGTCCGGCAACCTACTCCGTGCCTTCGACGGCGCCCATCCGCCGCCTCCGGGACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS TCA 72 bp | AGCCTTGAGCATGGCCTCTTGCGTCGCTGCGGAAGGTaGGCAGCAGCGCAGCAGTGCGCAGGCGCAGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: SLEHGLLRRCGR*AAAQQCAGAAV Trigger: GACCGCTGCGCCTGCGCACTGCTGCGCTGCTGCTCACCTTCCGCAGCGACGCAAGAGGCCATGCTCAAGGCT 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 72 bp | TATGCGCACCCAACCCCCAGCGGCCCTGAGGGTCGCTaGCGCTGCTGTAGCTGTGCTGCTGTGTCTGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: YAHPTPSGPEGR*RCCSCAAVSGP Trigger: GGGACCAGACACAGCAGCACAGCTACAGCAGCGCCAGCGACCCTCAGGGCCGCTGGGGGTTGGGTGCGCATA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS GCA 72 bp | TGTGGAGGTGCCACTGGGACCACTGAGAGCAGGGGGTaGCCCAGAGTCCACGAAGCAGCCCAGGTACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: CGGATGTTESRG*PRVHEAAQVPR Trigger: CCTGGGTACCTGGGCTGCTTCGTGGACTCTGGGGCACCCCCTGCTCTCAGTGGTCCCAGTGGCACCTCCACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 72 bp | CCTCCACAGAGCTGGCCTGGGTGGCCAAAACAGATCTaGTCACAGTCGGTGGCAGGGGCTGGACGTCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: PPQSWPGWPKQI*SQSVAGAGRPR Trigger: CCGCGGACGTCCAGCCCCTGCCACCGACTGTGACCAGATCTGTTTTGGCCACCCAGGCCAGCTCTGTGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 72 bp | AGAGAGCAGAGACGAGCGAGCGCAAGGAGCTCTGGCTaGAGGCACTCAGGGGACGGTAGCCCGCAGCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: REQRRASARSSG*RHSGDGSPQQD Trigger: GTCCTGCTGCGGGCTACCGTCCCCTGAGTGCCTCCAGCCAGAGCTCCTTGCGCTCGCTCGTCTCTGCTCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS GCA 72 bp | CACCCAACCCCCAGCGGCCCTGAGGGTCGCTGGCGCTaGTGTAGCTGTGCTGCTGTGTCTGGTCCCAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: HPTPSGPEGRWR*CSCAAVSGPRK Trigger: TTTTCTGGGACCAGACACAGCAGCACAGCTACAGCAGCGCCAGCGACCCTCAGGGCCGCTGGGGGTTGGGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS GCA 72 bp | GCGGTAGGTGAGCGCGAAGCCTTGAGCATGGCCTCTTaGGTCGCTGCGGAAGGTGAGCAGCAGCGCAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: AVGEREALSMAS*VAAEGEQQRSS Trigger: ACTGCTGCGCTGCTGCTCACCTTCCGCAGCGACGCAAGAGGCCATGCTCAAGGCTTCGCGCTCACCTACCGC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS GCA 72 bp | CACGGTGGAGAAGACTCGGGCACCTATCGAAGCCTGTaGAGCTCCGGGCTTGGGGCTGCAGCTCGCGTTAGC | + |
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Preference number: 6 (lower is better) Translates to: HGGEDSGTYRSL*SSGLGAAARVS Trigger: GCTAACGCGAGCTGCAGCCCCAAGCCCGGAGCTGCACAGGCTTCGATAGGTGCCCGAGTCTTCTCCACCGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 72 bp | GGCCTGGGTGGCCAAAACAGATCTGGTCACAGTCGGTaGCAGGGGCTGGACGTCCGCGGGCCAGGTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: GLGGQNRSGHSR*QGLDVRGPGHF Trigger: AAAGTGACCTGGCCCGCGGACGTCCAGCCCCTGCCACCGACTGTGACCAGATCTGTTTTGGCCACCCAGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 72 bp | GCCCCGGGAAGGTCCCATGGCCAGAGACCCTTTTCCTaGAGCCAGCAGACAGCTCCGTCGACGCAGCAAACG | + |
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Preference number: 6 (lower is better) Translates to: APGRSHGQRPFS*SQQTAPSTQQT Trigger: CGTTTGCTGCGTCGACGGAGCTGTCTGCTGGCTCCAGGAAAAGGGTCTCTGGCCATGGGACCTTCCCGGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 72 bp | CTGGTCCCAGAAAAGACAAGGGCGTCCAGCTCCGCGTaGGCCGGTGTAGTTCTGGTGGCCTCGGTAGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LVPEKTRASSSA*AGVVLVASVVS Trigger: GCTGACTACCGAGGCCACCAGAACTACACCGGCCCACGCGGAGCTGGACGCCCTTGTCTTTTCTGGGACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 72 bp | GCCAAAACAGATCTGGTCACAGTCGGTGGCAGGGGCTaGACGTCCGCGGGCCAGGTCACTTTCAGAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: AKTDLVTVGGRG*TSAGQVTFRAT Trigger: TGTGGCTCTGAAAGTGACCTGGCCCGCGGACGTCCAGCCCCTGCCACCGACTGTGACCAGATCTGTTTTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 72 bp | CCTAGTCGTCCATCGCCTCCACAGAGCTGGCCTGGGTaGCCAAAACAGATCTGGTCACAGTCGGTGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PSRPSPPQSWPG*PKQIWSQSVAG Trigger: CCCTGCCACCGACTGTGACCAGATCTGTTTTGGCCACCCAGGCCAGCTCTGTGGAGGCGATGGACGACTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 72 bp | GGAGCAACAGCAGCAGCACAGAGAAGGCCGTCACGGTaGAGAAGACTCGGGCACCTATCGAAGCCTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GATAAAQRRPSR*RRLGHLSKPVQ Trigger: CTGCACAGGCTTCGATAGGTGCCCGAGTCTTCTCCACCGTGACGGCCTTCTCTGTGCTGCTGCTGTTGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CCA 72 bp | AAGAGGCGGAAGGTGAGTTCTAGCACAGCGCCCAGTTaGCCCAATACCCAGCTGCAGTTCCGGTCTGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: KRRKVSSSTAPS*PNTQLQFRSGP Trigger: TGGACCAGACCGGAACTGCAGCTGGGTATTGGGCCAACTGGGCGCTGTGCTAGAACTCACCTTCCGCCTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS CAA 90 bp | ACCAGCCAGCTGGTAGCCCTTCATGCGGCAGAATCGAAGGCACACTaGGACAGTGAGCTTTGTGGAGGTGCCACTGGGACCACTGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSQLVALHAAESKAH*DSELCGGATGTTES Trigger: GCTCTCAGTGGTCCCAGTGGCACCTCCACAAAGCTCACTGTCCAAGTGTGCCTTCGATTCTGCCGCATGAAGGGCTACCAGCTGGCTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS TCA 72 bp | GGTCTCGAGAATCAGCCAACTCGAAGAGGCGGAAGGTaGGTTCTAGCACAGCGCCCAGTTGGCCCAATACCC | + |
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Preference number: 6 (lower is better) Translates to: GLENQPTRRGGR*VLAQRPVGPIP Trigger: GGGTATTGGGCCAACTGGGCGCTGTGCTAGAACTCACCTTCCGCCTCTTCGAGTTGGCTGATTCTCGAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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| CDS GCA 72 bp | AGTTTCCCTGGCAGGAGCCCACAGACACTTCATAGATaGCTAGTCGTCCATCGCCTCCACAGAGCTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SFPGRSPQTLHR*LVVHRLHRAGL Trigger: CAGGCCAGCTCTGTGGAGGCGATGGACGACTAGGCATCTATGAAGTGTCTGTGGGCTCCTGCCAGGGAAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046525.10 |
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