Pregenerated sensors for KREMEN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020393Ensembl transcript IDs: ENSMUST00000020662.15, ENSMUST00000151978.2
Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TGGGCCAGTGTGCTCAGCTCCAGCTTGGCAAGACAGGAGCCCGTGTaGGGCCCCCAGGTTCTGTTGGCAGACCAGGGTGGGGGTGCAGCC | + |
Preference number: 1 (lower is better) Translates to: WASVLSSSLARQEPV*GPQVLLADQGGGAA Trigger: GGCTGCACCCCCACCCTGGTCTGCCAACAGAACCTGGGGGCCTCACACGGGCTCCTGTCTTGCCAAGCTGGAGCTGAGCACACTGGCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 90 bp | GGCCCTGCAGTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTaGGCACATCCACCGCCCTTCCTGGGGACACCAATGCTGAGCCGC | + |
Preference number: 1 (lower is better) Translates to: GPAVLGCARPTAKGA*AHPPPFLGTPMLSR Trigger: GCGGCTCAGCATTGGTGTCCCCAGGAAGGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACACTGCAGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 90 bp | GATGACAGTGAGCCGTGGGGTGGCACCTGGCCCAGGCACATCCCATaGGCTGGCCCACAGGCCAGGACAGCTGTACCCGCCAGAGCTTTG | + |
Preference number: 1 (lower is better) Translates to: DDSEPWGGTWPRHIP*AGPQARTAVPARAL Trigger: CAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTGTGGGCCAGCCCATGGGATGTGCCTGGGCCAGGTGCCACCCCACGGCTCACTGTCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 90 bp | ATGAGGAGCATCAGGTGGGGTCCCTCCTGGGATGACAGTGAGCCGTaGGGTGGCACCTGGCCCAGGCACATCCCATGGGCTGGCCCACAG | + |
Preference number: 1 (lower is better) Translates to: MRSIRWGPSWDDSEP*GGTWPRHIPWAGPQ Trigger: CTGTGGGCCAGCCCATGGGATGTGCCTGGGCCAGGTGCCACCCCACGGCTCACTGTCATCCCAGGAGGGACCCCACCTGATGCTCCTCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR GCA 90 bp | TCCCCTTCCACTTGTTTGCTCTGCCCCACTCAGCCTGGGCCAGTGTaGTCAGCTCCAGCTTGGCAAGACAGGAGCCCGTGTGAGGCCCCC | + |
Preference number: 1 (lower is better) Translates to: SPSTCLLCPTQPGPV*SAPAWQDRSPCEAP Trigger: GGGGGCCTCACACGGGCTCCTGTCTTGCCAAGCTGGAGCTGAGCACACTGGCCCAGGCTGAGTGGGGCAGAGCAAACAAGTGGAAGGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 90 bp | TTGCTCTGCCCCACTCAGCCTGGGCCAGTGTGCTCAGCTCCAGCTTaGCAAGACAGGAGCCCGTGTGAGGCCCCCAGGTTCTGTTGGCAG | + |
Preference number: 1 (lower is better) Translates to: LLCPTQPGPVCSAPA*QDRSPCEAPRFCWQ Trigger: CTGCCAACAGAACCTGGGGGCCTCACACGGGCTCCTGTCTTGCCAAGCTGGAGCTGAGCACACTGGCCCAGGCTGAGTGGGGCAGAGCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR TCA 90 bp | AGGAGCAGTGAGGTGAGTTACGGAGCTGGCCACGGCCAGGGGCTCTaGAGATGGAATGCCAACTTGCTCGGCCCGGGAATGCACACGGGC | + |
Preference number: 1 (lower is better) Translates to: RSSEVSYGAGHGQGL*RWNANLLGPGMHTG Trigger: GCCCGTGTGCATTCCCGGGCCGAGCAAGTTGGCATTCCATCTTCAGAGCCCCTGGCCGTGGCCAGCTCCGTAACTCACCTCACTGCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR CCA 90 bp | CGAGCTCTGATAGTGTCAGGCCAGCGGATGATGAGGAGCATCAGGTaGGGTCCCTCCTGGGATGACAGTGAGCCGTGGGGTGGCACCTGG | + |
Preference number: 1 (lower is better) Translates to: RALIVSGQRMMRSIR*GPSWDDSEPWGGTW Trigger: CCAGGTGCCACCCCACGGCTCACTGTCATCCCAGGAGGGACCCCACCTGATGCTCCTCATCATCCGCTGGCCTGACACTATCAGAGCTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 90 bp | CATGGTGTTCCAGGAGGGTACCCAGGAGAGCAGAGGCTCAAGGGCTaGCAGGAGAGTGACCAAGGTCTACCTTCAGGGCACAGCTGCTGC | + |
Preference number: 1 (lower is better) Translates to: HGVPGGYPGEQRLKG*QESDQGLPSGHSCC Trigger: GCAGCAGCTGTGCCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGCCCTTGAGCCTCTGCTCTCCTGGGTACCCTCCTGGAACACCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 90 bp | CACTCCACAGGAGAGGAGCCAGGGAACCATGGAGGCTTGTGGACTTaGCTCGGGAGACTTGTGTGGCCCCTGCAGAGGCTGACAGAGTCT | + |
Preference number: 1 (lower is better) Translates to: HSTGEEPGNHGGLWT*LGRLVWPLQRLTES Trigger: AGACTCTGTCAGCCTCTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 90 bp | ACAGGACACTCCACAGGAGAGGAGCCAGGGAACCATGGAGGCTTGTaGACTTGGCTCGGGAGACTTGTGTGGCCCCTGCAGAGGCTGACA | + |
Preference number: 1 (lower is better) Translates to: TGHSTGEEPGNHGGL*TWLGRLVWPLQRLT Trigger: TGTCAGCCTCTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGAGTGTCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR GCA 90 bp | CTTCGGCCACCTCCCTCTAAGGTGAGAGATCCCCTTCCACTTGTTTaGTCTGCCCCACTCAGCCTGGGCCAGTGTGCTCAGCTCCAGCTT | + |
Preference number: 1 (lower is better) Translates to: LRPPPSKVRDPLPLV*SAPLSLGQCAQLQL Trigger: AAGCTGGAGCTGAGCACACTGGCCCAGGCTGAGTGGGGCAGAGCAAACAAGTGGAAGGGGATCTCTCACCTTAGAGGGAGGTGGCCGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 90 bp | CCAGGGAACCATGGAGGCTTGTGGACTTGGCTCGGGAGACTTGTGTaGCCCCTGCAGAGGCTGACAGAGTCTGGAGGCCATCCACTTCTA | + |
Preference number: 1 (lower is better) Translates to: PGNHGGLWTWLGRLV*PLQRLTESGGHPLL Trigger: TAGAAGTGGATGGCCTCCAGACTCTGTCAGCCTCTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR TCA 90 bp | AGCCAAGGCACCCTGCTGGACAAGGGCTGCCTAGAGAAGTGTTTCTaGGCTTCTGTGTACAGGCTCTCAGAGGCAGCGGGAGCAGTGGTC | + |
Preference number: 1 (lower is better) Translates to: SQGTLLDKGCLEKCF*ASVYRLSEAAGAVV Trigger: GACCACTGCTCCCGCTGCCTCTGAGAGCCTGTACACAGAAGCTCAGAAACACTTCTCTAGGCAGCCCTTGTCCAGCAGGGTGCCTTGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR CCA 90 bp | CAGACATCAAACAGGACACTCCACAGGAGAGGAGCCAGGGAACCATaGAGGCTTGTGGACTTGGCTCGGGAGACTTGTGTGGCCCCTGCA | + |
Preference number: 1 (lower is better) Translates to: QTSNRTLHRRGAREP*RLVDLARETCVAPA Trigger: TGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 90 bp | GTTTCTGAGCTTCTGTGTACAGGCTCTCAGAGGCAGCGGGAGCAGTaGTCCAAACAGGCTGGAGACAGACACCACAGGCGGTCGGTCAAG | + |
Preference number: 1 (lower is better) Translates to: VSELLCTGSQRQREQ*SKQAGDRHHRRSVK Trigger: CTTGACCGACCGCCTGTGGTGTCTGTCTCCAGCCTGTTTGGACCACTGCTCCCGCTGCCTCTGAGAGCCTGTACACAGAAGCTCAGAAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR TCA 90 bp | TGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGCACAGCTGCTGCTaGCAAAGGCCACTTCCAGACTGCAGGACTTCTCAGTCGGGGATG | + |
Preference number: 1 (lower is better) Translates to: WQESDQGLPSGHSCC*QRPLPDCRTSQSGM Trigger: CATCCCCGACTGAGAAGTCCTGCAGTCTGGAAGTGGCCTTTGTCAGCAGCAGCTGTGCCCTGAAGGTAGACCTTGGTCACTCTCCTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 90 bp | GCTGACAAAGGCCACTTCCAGACTGCAGGACTTCTCAGTCGGGGATaGCCCTTCCTCTCCCAACTGCAGCTGGGTCTCTCAATCTTGCAG | + |
Preference number: 1 (lower is better) Translates to: ADKGHFQTAGLLSRG*PFLSQLQLGLSILQ Trigger: CTGCAAGATTGAGAGACCCAGCTGCAGTTGGGAGAGGAAGGGCCATCCCCGACTGAGAAGTCCTGCAGTCTGGAAGTGGCCTTTGTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR TCA 90 bp | GTCCCTCTCCCCACTAAGCCACCTCCTCAGTCCTACACCAACTTTTaGAAGGAAGGCTCAGGAGGCCATCAGCAAGCAGAGTCCCGGTTC | + |
Preference number: 1 (lower is better) Translates to: VPLPTKPPPQSYTNF*KEGSGGHQQAESRF Trigger: GAACCGGGACTCTGCTTGCTGATGGCCTCCTGAGCCTTCCTTTCAAAAGTTGGTGTAGGACTGAGGAGGTGGCTTAGTGGGGAGAGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR GCA 90 bp | AGGCTAGACTGGCTAGTCAGTGAATCCCAGGGATTCACCCATCGCTaGCTCCCTAGTGCTGTGATGACAAGCAGTTGTCCCTCTCCCCAC | + |
Preference number: 1 (lower is better) Translates to: RLDWLVSESQGFTHR*LPSAVMTSSCPSPH Trigger: GTGGGGAGAGGGACAACTGCTTGTCATCACAGCACTAGGGAGGCAGCGATGGGTGAATCCCTGGGATTCACTGACTAGCCAGTCTAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR CCA 90 bp | GGGCTGCCTCTAAAGCAGGGTGCTCCCAAAAGAGATGGTGGTGAATaGGAAGGCAGGGAACTCATCAGAGGAGAACTCAGGGGAGCAAAC | + |
Preference number: 1 (lower is better) Translates to: GLPLKQGAPKRDGGE*EGRELIRGELRGAN Trigger: GTTTGCTCCCCTGAGTTCTCCTCTGATGAGTTCCCTGCCTTCCCATTCACCACCATCTCTTTTGGGAGCACCCTGCTTTAGAGGCAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 90 bp | TCCTCTCCCAACTGCAGCTGGGTCTCTCAATCTTGCAGCTTTTCCTaGGAGGATCTCCAGTTCCCAAGCCTGACCTTTTCCTGCCTCCCT | + |
Preference number: 1 (lower is better) Translates to: SSPNCSWVSQSCSFS*EDLQFPSLTFSCLP Trigger: AGGGAGGCAGGAAAAGGTCAGGCTTGGGAACTGGAGATCCTCCCAGGAAAAGCTGCAAGATTGAGAGACCCAGCTGCAGTTGGGAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 90 bp | GTGACTGGCTGCCTACAGGTTCTAACAGACTGTGCCTGTCATTTCTaGAGGTCTGGCCTGGGTGATTTACAGCCCTTCCTTCCCACTGTC | + |
Preference number: 1 (lower is better) Translates to: VTGCLQVLTDCACHF*RSGLGDLQPFLPTV Trigger: GACAGTGGGAAGGAAGGGCTGTAAATCACCCAGGCCAGACCTCCAGAAATGACAGGCACAGTCTGTTAGAACCTGTAGGCAGCCAGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 90 bp | CTATGCTCCAGGCAGGGTGTTACCAGCACAAAGGCCCTCTGTGACTaGCTGCCTACAGGTTCTAACAGACTGTGCCTGTCATTTCTGGAG | + |
Preference number: 1 (lower is better) Translates to: LCSRQGVTSTKALCD*LPTGSNRLCLSFLE Trigger: CTCCAGAAATGACAGGCACAGTCTGTTAGAACCTGTAGGCAGCCAGTCACAGAGGGCCTTTGTGCTGGTAACACCCTGCCTGGAGCATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR TCA 90 bp | GGTTCTAACAGACTGTGCCTGTCATTTCTGGAGGTCTGGCCTGGGTaGTTTACAGCCCTTCCTTCCCACTGTCCTCTGCTGTTGTTGGAG | + |
Preference number: 1 (lower is better) Translates to: GSNRLCLSFLEVWPG*FTALPSHCPLLLLE Trigger: CTCCAACAACAGCAGAGGACAGTGGGAAGGAAGGGCTGTAAATCACCCAGGCCAGACCTCCAGAAATGACAGGCACAGTCTGTTAGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR TCA 90 bp | AAAGGAAGGCTCAGGAGGCCATCAGCAAGCAGAGTCCCGGTTCCCTaGGGGAAGCCAATGTGTGAAGCCACGAGAGTGAAGTTTAAGTGT | + |
Preference number: 1 (lower is better) Translates to: KGRLRRPSASRVPVP*GKPMCEATRVKFKC Trigger: ACACTTAAACTTCACTCTCGTGGCTTCACACATTGGCTTCCCTCAGGGAACCGGGACTCTGCTTGCTGATGGCCTCCTGAGCCTTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR GCA 90 bp | AGGTCTGGCCTGGGTGATTTACAGCCCTTCCTTCCCACTGTCCTCTaGTGTTGTTGGAGGTGGGTTAGTTTTCCTTATGTGTCCCTACCC | + |
Preference number: 1 (lower is better) Translates to: RSGLGDLQPFLPTVL*CCWRWVSFPYVSLP Trigger: GGGTAGGGACACATAAGGAAAACTAACCCACCTCCAACAACAGCAGAGGACAGTGGGAAGGAAGGGCTGTAAATCACCCAGGCCAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR GCA 90 bp | TTGCTGATGTGGGAGAGGATGAAGACCTCTTTCCTACTCTGTCTCTaGTTTGTAAGCAGTGTGACAGGAAGGGAGGGACATAGGGCACCT | + |
Preference number: 1 (lower is better) Translates to: LLMWERMKTSFLLCL*FVSSVTGREGHRAP Trigger: AGGTGCCCTATGTCCCTCCCTTCCTGTCACACTGCTTACAAAGCAGAGACAGAGTAGGAAAGAGGTCTTCATCCTCTCCCACATCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR GCA 90 bp | GTCCCTTCTATGCCTCCTGATCTATCACCATGTGAACAGTCTCTCTaGCACCATGAACTGAATTGTTCTGCCATCCTTCCTTGTCATGAC | + |
Preference number: 1 (lower is better) Translates to: VPSMPPDLSPCEQSL*HHELNCSAILPCHD Trigger: GTCATGACAAGGAAGGATGGCAGAACAATTCAGTTCATGGTGGCAGAGAGACTGTTCACATGGTGATAGATCAGGAGGCATAGAAGGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR GCA 90 bp | TTGAAGGTTATATATTGCACGAATCCCTGGCTACAGTCCCTTCTATaGCTCCTGATCTATCACCATGTGAACAGTCTCTCTGCCACCATG | + |
Preference number: 1 (lower is better) Translates to: LKVIYCTNPWLQSLL*LLIYHHVNSLSATM Trigger: CATGGTGGCAGAGAGACTGTTCACATGGTGATAGATCAGGAGGCATAGAAGGGACTGTAGCCAGGGATTCGTGCAATATATAACCTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR-3UTR CCA 90 bp | CCGGCGCGAGCTCTGATAGTGTCAGGCCAGCGGATGATGAGGAGCATCAGGTGGGATGACAGTGAGCCGTaGGGTGGCACCTGGCCCAGG | + |
Preference number: 2 (lower is better) Translates to: PARALIVSGQRMMRSIRWDDSEP*GGTWPR Trigger: CCTGGGCCAGGTGCCACCCCACGGCTCACTGTCATC...CCACCTGATGCTCCTCATCATCCGCTGGCCTGACACTATCAGAGCTCGCGCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR TCA 90 bp | GTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTGGGCACATCCACCGCCCTCCAGTTCCCAAGCCTaGCCTTTTCCTGCCTCCCTG | + |
Preference number: 2 (lower is better) Translates to: VLGCARPTAKGAWAHPPPSSSQA*PFPASL Trigger: CAGGGAGGCAGGAAAAGGTCAGGCTTGGGAACTGGA...GGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CAA 90 bp | ACACTCCACAGGAGAGGAGCCAGGGAACCATGGAGGCTTGTGGACTaGGCTCGGGAGACTTGTGTGGCCCCTGCAGAGGCTGACAGAGTC | + |
Preference number: 2 (lower is better) Translates to: TLHRRGAREPWRLVD*ARETCVAPAEADRV Trigger: GACTCTGTCAGCCTCTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGAGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CAA 90 bp | CAAACAGGACACTCCACAGGAGAGGAGCCAGGGAACCATGGAGGCTaGTGGACTTGGCTCGGGAGACTTGTGTGGCCCCTGCAGAGGCTG | + |
Preference number: 2 (lower is better) Translates to: QTGHSTGEEPGNHGG*WTWLGRLVWPLQRL Trigger: CAGCCTCTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGAGTGTCCTGTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR CCA 90 bp | TCGGCTTACCCCTATGCTCCAGGCAGGGTGTTACCAGCACAAAGGCCCTCTGTGTCCCTGATCCCCAGATaGCCCCAGACAGTCCTGGGG | + |
Preference number: 2 (lower is better) Translates to: SAYPYAPGRVLPAQRPSVSLIPR*PQTVLG Trigger: CCCCAGGACTGTCTGGGGCCATCTGGGGATCAGGGA...CACAGAGGGCCTTTGTGCTGGTAACACCCTGCCTGGAGCATAGGGGTAAGCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CAA 90 bp | CCATGGGCTGGCCCACAGGCCAGGACAGCTGTACCCGCCAGAGCTTaGATCTTCAAGAGCTTTTGGCTGAGGAGTCTGAAGCCAGAGCCC | + |
Preference number: 2 (lower is better) Translates to: PWAGPQARTAVPARA*IFKSFWLRSLKPEP Trigger: GGGCTCTGGCTTCAGACTCCTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTGTGGGCCAGCCCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR TCA 90 bp | GTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTGGGCACATCCACCGCCCCAAAAGAGATGGTGGTaGATGGGAAGGCAGGGAACT | + |
Preference number: 2 (lower is better) Translates to: VLGCARPTAKGAWAHPPPQKRWW*MGRQGT Trigger: AGTTCCCTGCCTTCCCATTCACCACCATCTCTTTTG...GGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR CCA 90 bp | GGAGAGCAGAGGCTCAAGGGCTGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGTGTGTCCTGTCAGCCTaGGCCTGTCTTACCATCCCC | + |
Preference number: 2 (lower is better) Translates to: GEQRLKGWQESDQGLPSGCVLSA*ACLTIP Trigger: GGGGATGGTAAGACAGGCCCAGGCTGACAGGACACA...CCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGCCCTTGAGCCTCTGCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR TCA 90 bp | GGAAGGTCTTGCTGCTATGAAGGTGGCGGGGATGGCAGCTCCCTCGCTGGATCTCAAGCTCTTGATCGCTaGGTTACAGCCCCAGCTCTG | + |
Preference number: 2 (lower is better) Translates to: GRSCCYEGGGDGSSLAGSQALDR*VTAPAL Trigger: CAGAGCTGGGGCTGTAACTCAGCGATCAAGAGCTTG...AGATCCAGCGAGGGAGCTGCCATCCCCGCCACCTTCATAGCAGCAAGACCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR GCA 90 bp | GCTGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGCACAGCTGCTGCTGACAAAACAGCCCCAGCTCTGTaGTACAGCCCCAGCTCTAGG | + |
Preference number: 2 (lower is better) Translates to: AGRRVTKVYLQGTAAADKTAPAL*YSPSSR Trigger: CCTAGAGCTGGGGCTGTAGCACAGAGCTGGGGCTGT...TTTGTCAGCAGCAGCTGTGCCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR TCA 90 bp | GGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGAGGCTACAGGCTTGGGCTaGGGACAGGAAGACAGGCTG | + |
Preference number: 2 (lower is better) Translates to: GQDSCTRQSFDLQELLAEATGLG*GQEDRL Trigger: CAGCCTGTCTTCCTGTCCTCAGCCCAAGCCTGTAGC...CTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR TCA 90 bp | GGCGCGAGCTCTGATAGTGTCAGGCCAGCGGATGATGAGGAGCATCAGGTGGGGTACCCGCCAGAGCTTTaGTCTTCAAGAGCTTTTGGC | + |
Preference number: 2 (lower is better) Translates to: GASSDSVRPADDEEHQVGYPPEL*SSRAFG Trigger: GCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTA...CCCCACCTGATGCTCCTCATCATCCGCTGGCCTGACACTATCAGAGCTCGCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR CCA 90 bp | GGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGAGTGGAGGATCCCAGGCTaGGCTGCCTCTAAAGCAGGG | + |
Preference number: 2 (lower is better) Translates to: GQDSCTRQSFDLQELLAEWRIPG*AASKAG Trigger: CCCTGCTTTAGAGGCAGCCCAGCCTGGGATCCTCCA...CTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR GCA 90 bp | GAGGATCTCCAGTTCCCAAGCCTGACCTTTTCCTGCCTCCCTGTCTGGGGGACAGCCCGCATGCTATGGTaGAGTCTTTTTCTCTCCCAC | + |
Preference number: 2 (lower is better) Translates to: EDLQFPSLTFSCLPVWGTARMLW*SLFLSH Trigger: GTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGC...TGTCCCCCAGACAGGGAGGCAGGAAAAGGTCAGGCTTGGGAACTGGAGATCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR CCA 90 bp | GGAGAGCAGAGGCTCAAGGGCTGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGCCATGGACAAACAGATaGACCAATCCTCAGGCTTGC | + |
Preference number: 2 (lower is better) Translates to: GEQRLKGWQESDQGLPSGPWTNR*TNPQAC Trigger: GCAAGCCTGAGGATTGGTCCATCTGTTTGTCCATGG...CCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGCCCTTGAGCCTCTGCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR CCA 90 bp | TCGGCTTACCCCTATGCTCCAGGCAGGGTGTTACCAGCACAAAGGCCCTCTGTGTCTCCCAACTGCAGCTaGGTCTCTCAATCTTGCAGC | + |
Preference number: 2 (lower is better) Translates to: SAYPYAPGRVLPAQRPSVSPNCS*VSQSCS Trigger: GCTGCAAGATTGAGAGACCCAGCTGCAGTTGGGAGA...CACAGAGGGCCTTTGTGCTGGTAACACCCTGCCTGGAGCATAGGGGTAAGCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR CCA 90 bp | GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGATGAGGAGCATCAGGTaGGGTCCCTCCTGGGATGAC | + |
Preference number: 2 (lower is better) Translates to: AVPKADLRHQTGHSTGEEMRSIR*GPSWDD Trigger: GTCATCCCAGGAGGGACCCCACCTGATGCTCCTCAT...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR TCA 90 bp | GAGGTGCAGCCAAGGCACCCTGCTGGACAAGGGCTGCCTAGAGAAGTGTTTCTGGGAGTCATGGTGGCTTaGCTGACATTCATGCGTGTT | + |
Preference number: 2 (lower is better) Translates to: EVQPRHPAGQGLPREVFLGVMVA*LTFMRV Trigger: AACACGCATGAATGTCAGTCAAGCCACCATGACTCC...CAGAAACACTTCTCTAGGCAGCCCTTGTCCAGCAGGGTGCCTTGGCTGCACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR-3UTR TCA 90 bp | GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGAACCCTCTAGAAAGATaGCATCTGGTGTGGCCCTGC | + |
Preference number: 2 (lower is better) Translates to: AVPKADLRHQTGHSTGEENPLER*HLVWPC Trigger: GCAGGGCCACACCAGATGTCATCTTTCTAGAGGGTT...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR TCA 90 bp | AGACAGTCCTGGGGAGCAGCAGCTAGAGGAGAGGCCTCAATGGCAGTGACTGAGAGACAGGCTGAATTCTaGTTCCACAGGATTGGCAAC | + |
Preference number: 2 (lower is better) Translates to: RQSWGAAARGEASMAVTERQAEF*FHRIGN Trigger: GTTGCCAATCCTGTGGAATCAGAATTCAGCCTGTCT...CTCAGTCACTGCCATTGAGGCCTCTCCTCTAGCTGCTGCTCCCCAGGACTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR GCA 90 bp | GACTCTGGTGTCCTCTGGTTGACTCATCAGCTCAGGTCACTGCCTCGTCAGTACACCAATCCTCAGGCTTaGCCCATTGGTCAGTGGGTA | + |
Preference number: 2 (lower is better) Translates to: DSGVLWLTHQLRSLPRQYTNPQA*PIGQWV Trigger: TACCCACTGACCAATGGGGCAAGCCTGAGGATTGGT...GTACTGACGAGGCAGTGACCTGAGCTGATGAGTCAACCAGAGGACACCAGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR CCA 90 bp | GGAAGGTCTTGCTGCTATGAAGGTGGCGGGGATGGCAGCTCCCTCGCTGGATCTATGACACATGGTAGTTaGCAGCAGAGAAAGCTCCAA | + |
Preference number: 2 (lower is better) Translates to: GRSCCYEGGGDGSSLAGSMTHGS*QQRKLQ Trigger: TTGGAGCTTTCTCTGCTGCCAACTACCATGTGTCAT...AGATCCAGCGAGGGAGCTGCCATCCCCGCCACCTTCATAGCAGCAAGACCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR CCA 90 bp | CCGGCGCGAGCTCTGATAGTGTCAGGCCAGCGGATGATGAGGAGCATCAGGTGGACTGTGTCTGTTCCATaGACAAACAGATGGACCAAT | + |
Preference number: 2 (lower is better) Translates to: PARALIVSGQRMMRSIRWTVSVP*TNRWTN Trigger: ATTGGTCCATCTGTTTGTCCATGGAACAGACACAGT...CCACCTGATGCTCCTCATCATCCGCTGGCCTGACACTATCAGAGCTCGCGCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR CCA 90 bp | CAGGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGTGTGCCTGTCATTTCTaGAGGTCTGGCCTGGGTGAT | + |
Preference number: 2 (lower is better) Translates to: QARTAVPARALIFKSFWLCACHF*RSGLGD Trigger: ATCACCCAGGCCAGACCTCCAGAAATGACAGGCACA...CAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR CCA 90 bp | GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGGAGGCTGACAGAGTCTaGAGGCCATCCACTTCTAAG | + |
Preference number: 2 (lower is better) Translates to: AVPKADLRHQTGHSTGEEEADRV*RPSTSK Trigger: CTTAGAAGTGGATGGCCTCCAGACTCTGTCAGCCTC...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CAA 90 bp | AGTCTGAGTCTGCCATGTTCCCTAGAGAGGCTACGCTCTCCTCCCTaGTCCCTAGCTGATAGTGCAATTTGGGAAGGCTGTGGAACACTG | + |
Preference number: 2 (lower is better) Translates to: SLSLPCSLERLRSPP*SLADSAIWEGCGTL Trigger: CAGTGTTCCACAGCCTTCCCAAATTGCACTATCAGCTAGGGACAAGGGAGGAGAGCGTAGCCTCTCTAGGGAACATGGCAGACTCAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR-3UTR TCA 90 bp | CTGAGTCTGCCATGTTCCCTAGAGAGGCTACGCTCTCCTCCCTTGTCCCTAGCTTCTGCCACCATGAACTaGATTGTTCTGCCATCCTTC | + |
Preference number: 2 (lower is better) Translates to: LSLPCSLERLRSPPLSLASATMN*IVLPSF Trigger: GAAGGATGGCAGAACAATTCAGTTCATGGTGGCAGA...AGCTAGGGACAAGGGAGGAGAGCGTAGCCTCTCTAGGGAACATGGCAGACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR CAA 90 bp | TGTGTAAGGGGGTCAGAGGACACCTCAGGTATTGTTCTTCAGGACTaGTCAACCTTGTTTCTTGAGACAGGGGCTTGCCTGTCAGTAGGC | + |
Preference number: 2 (lower is better) Translates to: CVRGSEDTSGIVLQD*STLFLETGACLSVG Trigger: GCCTACTGACAGGCAAGCCCCTGTCTCAAGAAACAAGGTTGACAAGTCCTGAAGAACAATACCTGAGGTGTCCTCTGACCCCCTTACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR-3UTR GCA 90 bp | CCCACATTTAGAGAAGTCCAGAGCTCTGTTCTCCTTGCTCACTTTAGGCAGCCGCAGATGCTGCCCGCATaGTATGGTGCAGTCTTTTTC | + |
Preference number: 2 (lower is better) Translates to: PTFREVQSSVLLAHFRQPQMLPA*YGAVFF Trigger: GAAAAAGACTGCACCATAGCATGCGGGCAGCATCTG...CGGCTGCCTAAAGTGAGCAAGGAGAACAGAGCTCTGGACTTCTCTAAATGTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR GCA 90 bp | GGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGAGAACCCATATCCTTTATaGACTACGCACATGGCACTC | + |
Preference number: 2 (lower is better) Translates to: GQDSCTRQSFDLQELLAENPYPL*TTHMAL Trigger: GAGTGCCATGTGCGTAGTGCATAAAGGATATGGGTT...CTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR TCA 90 bp | CCCACATTTAGAGAAGTCCAGAGCTCTGTTCTCCTTGCTCACTTTAGGCAGCCGGACAGGAAGACAGGCTaGATTCTGATTCCACAGGAT | + |
Preference number: 2 (lower is better) Translates to: PTFREVQSSVLLAHFRQPDRKTG*ILIPQD Trigger: ATCCTGTGGAATCAGAATTCAGCCTGTCTTCCTGTC...CGGCTGCCTAAAGTGAGCAAGGAGAACAGAGCTCTGGACTTCTCTAAATGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR TCA 90 bp | GGTGGGCAGTTGAAGGTTATATATTGCACGAATCCCTGGCTACAGTCCCTTCTAGGTCACTGCTGTGGCTaGTTTAGCCATGCCACAGTA | + |
Preference number: 2 (lower is better) Translates to: GGQLKVIYCTNPWLQSLLGHCCG*FSHATV Trigger: TACTGTGGCATGGCTAAATCAGCCACAGCAGTGACC...TAGAAGGGACTGTAGCCAGGGATTCGTGCAATATATAACCTTCAACTGCCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR-3UTR CCA 90 bp | AGCCAGCAGCCAGCCCACTGTAGACTCTGGTGTCCTCTGGTTGACTCATCAGCTAAACCGATCTGTATGTaGACAAAACAGAGAAGAAGC | + |
Preference number: 2 (lower is better) Translates to: SQQPAHCRLWCPLVDSSAKPICM*TKQRRS Trigger: GCTTCTTCTCTGTTTTGTCCACATACAGATCGGTTT...AGCTGATGAGTCAACCAGAGGACACCAGAGTCTACAGTGGGCTGGCTGCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR CCA 90 bp | GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGTGCTGTTGTTGGAGGTaGGTTAGTTTTCCTTATGTG | + |
Preference number: 2 (lower is better) Translates to: AVPKADLRHQTGHSTGEECCCWR*VSFPYV Trigger: CACATAAGGAAAACTAACCCACCTCCAACAACAGCA...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR CCA 90 bp | TTACCAGCACAAAGGCCCTCTGTGACTGGCTGCCTACAGGTTCTAACAGACTGTGTCCTCTGCTGTTGTTaGAGGTGGGTTAGTTTTCCT | + |
Preference number: 2 (lower is better) Translates to: LPAQRPSVTGCLQVLTDCVLCCC*RWVSFP Trigger: AGGAAAACTAACCCACCTCCAACAACAGCAGAGGAC...ACAGTCTGTTAGAACCTGTAGGCAGCCAGTCACAGAGGGCCTTTGTGCTGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR TCA 90 bp | ACGGGCAGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTTCCTACACCAACTTTTaGAAGGAAGGCTCAGGAGGC | + |
Preference number: 2 (lower is better) Translates to: TGRKRSSVDNVGIITSHPSYTNF*KEGSGG Trigger: GCCTCCTGAGCCTTCCTTTCAAAAGTTGGTGTAGGA...AGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCTGCCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR-3UTR GCA 90 bp | ACGGGCAGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTGGGTACAGATGGCTCTaGTGGCTTACCAAATGCAAG | + |
Preference number: 2 (lower is better) Translates to: TGRKRSSVDNVGIITSHPGYRWL*WLTKCK Trigger: CTTGCATTTGGTAAGCCAGCAGAGCCATCTGTACCC...AGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCTGCCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR CAA 90 bp | GGTTTACCAGAGGAGGCTGGAGGCTGGAGAAGCCTCAGAGTGATGTaGATTCTGCATAGTTCTAGTGGAAATATGGAAGCCAGAACCTTA | + |
Preference number: 2 (lower is better) Translates to: GLPEEAGGWRSLRVM*ILHSSSGNMEARTL Trigger: TAAGGTTCTGGCTTCCATATTTCCACTAGAACTATGCAGAATCAACATCACTCTGAGGCTTCTCCAGCCTCCAGCCTCCTCTGGTAAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR-3UTR TCA 90 bp | TGTAGACAATGTAGGAATAATAACCAGCCACCCTGCGCATCACTGACCACAGACCTAGAGAAGTGTTTCTaGGCTTCTGTGTACAGGCTC | + |
Preference number: 2 (lower is better) Translates to: CRQCRNNNQPPCASLTTDLEKCF*ASVYRL Trigger: GAGCCTGTACACAGAAGCTCAGAAACACTTCTCTAG...GTCTGTGGTCAGTGATGCGCAGGGTGGCTGGTTATTATTCCTACATTGTCTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR-3UTR CCA 90 bp | AAGTCTAGTATCCAGGAAGTTCACTGTGTCTGTTCCATGGACAAACAGATGGACCACCCAAGAGTCTTCTaGAGTCAGGTCCAGCTGTGT | + |
Preference number: 2 (lower is better) Translates to: KSSIQEVHCVCSMDKQMDHPRVF*SQVQLC Trigger: ACACAGCTGGACCTGACTCCAGAAGACTCTTGGGTG...GTCCATCTGTTTGTCCATGGAACAGACACAGTGAACTTCCTGGATACTAGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR CCA 90 bp | TGTAGACAATGTAGGAATAATAACCAGCCACCCTGCGCATCACTGACCACAGACTACAGATGGCTCTGCTaGCTTACCAAATGCAAGGAG | + |
Preference number: 2 (lower is better) Translates to: CRQCRNNNQPPCASLTTDYRWLC*LTKCKE Trigger: CTCCTTGCATTTGGTAAGCCAGCAGAGCCATCTGTA...GTCTGTGGTCAGTGATGCGCAGGGTGGCTGGTTATTATTCCTACATTGTCTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR CAA 90 bp | CCAGGCCAGCCTAGAAAACCTGACAGTTCTTTCAGTCTGGCTCTATaGCAAACTGTAAAGACAGGGGAAACCGATCTGTATGTGGACAAA | + |
Preference number: 2 (lower is better) Translates to: PGQPRKPDSSFSLAL*QTVKTGETDLYVDK Trigger: TTTGTCCACATACAGATCGGTTTCCCCTGTCTTTACAGTTTGCAATAGAGCCAGACTGAAAGAACTGTCAGGTTTTCTAGGCTGGCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR TCA 90 bp | AGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTGCGCATGTGAAGCCACGAGAGTaGAGTTTAAGTGTCAGTGGA | + |
Preference number: 2 (lower is better) Translates to: RKRSSVDNVGIITSHPAHVKPRE*SLSVSG Trigger: TCCACTGACACTTAAACTTCACTCTCGTGGCTTCAC...ATGCGCAGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR-3UTR TCA 90 bp | CTCCAGTCACTCAGGGATCTCTCTATTCTTTCAAGTCATGAGCTGTCGGTAGCTAGCCTCCTAAAACCATaGACCAGAACCATAAACAGT | + |
Preference number: 2 (lower is better) Translates to: LQSLRDLSILSSHELSVASLLKP*TRTINS Trigger: ACTGTTTATGGTTCTGGTTCATGGTTTTAGGAGGCT...AGCTACCGACAGCTCATGACTTGAAAGAATAGAGAGATCCCTGAGTGACTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR-3UTR GCA 90 bp | AAAGCAAACTGGAAGAAGATGTCACAGAGAAGGACCACTTTGGACTGGGACAAATGCTGGCTTACCAAATaGAAGGAGTCATGGTGGCTT | + |
Preference number: 2 (lower is better) Translates to: KANWKKMSQRRTTLDWDKCWLTK*KESWWL Trigger: AAGCCACCATGACTCCTTGCATTTGGTAAGCCAGCA...TTTGTCCCAGTCCAAAGTGGTCCTTCTCTGTGACATCTTCTTCCAGTTTGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR-3UTR GCA 90 bp | AGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTGCGCATCTACAGTCCCTTCTATaGCTCCTGATCTATCACCAT | + |
Preference number: 2 (lower is better) Translates to: RKRSSVDNVGIITSHPAHLQSLL*LLIYHH Trigger: ATGGTGATAGATCAGGAGGCATAGAAGGGACTGTAG...ATGCGCAGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR-3UTR CCA 90 bp | AGAACATTCCAAAGCCAATGTAAAAGGGCACCACAGATCTACAAATCTCAGGAATCTGTACTAGGGAAGTaGGAGTCACTGCTGTGTGGG | + |
Preference number: 2 (lower is better) Translates to: RTFQSQCKRAPQIYKSQESVLGK*ESLLCG Trigger: CCCACACAGCAGTGACTCCCACTTCCCTAGTACAGA...TTCCTGAGATTTGTAGATCTGTGGTGCCCTTTTACATTGGCTTTGGAATGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR-3UTR CCA 90 bp | AGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTGCGCATCACAGCAAAGCAAACTaGAAGAAGATGTCACAGAGA | + |
Preference number: 2 (lower is better) Translates to: RKRSSVDNVGIITSHPAHHSKAN*KKMSQR Trigger: TCTCTGTGACATCTTCTTCCAGTTTGCTTTGCTGTG...ATGCGCAGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR-3UTR CCA 90 bp | AGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTGCGCATCGAAAAGCGAACAATTaGCCAGAACTGAGTTTAAAG | + |
Preference number: 2 (lower is better) Translates to: RKRSSVDNVGIITSHPAHRKANN*PELSLK Trigger: CTTTAAACTCAGTTCTGGCCAATTGTTCGCTTTTCG...ATGCGCAGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR CCA 72 bp | ATCAGGTGGGGTCCCTCCTGGGATGACAGTGAGCCGTaGGGTGGCACCTGGCCCAGGCACATCCCATGGGCT | + |
Preference number: 3 (lower is better) Translates to: IRWGPSWDDSEP*GGTWPRHIPWA Trigger: AGCCCATGGGATGTGCCTGGGCCAGGTGCCACCCCACGGCTCACTGTCATCCCAGGAGGGACCCCACCTGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 72 bp | CCCACTCAGCCTGGGCCAGTGTGCTCAGCTCCAGCTTaGCAAGACAGGAGCCCGTGTGAGGCCCCCAGGTTC | + |
Preference number: 3 (lower is better) Translates to: PTQPGPVCSAPA*QDRSPCEAPRF Trigger: GAACCTGGGGGCCTCACACGGGCTCCTGTCTTGCCAAGCTGGAGCTGAGCACACTGGCCCAGGCTGAGTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR GCA 72 bp | CCCAAGAGAGAAGGTGGGCCCTGCAGTGTTGGGCTGTaGCAGGCCCACAGCAAAAGGAGCGTGGGCACATCC | + |
Preference number: 3 (lower is better) Translates to: PKREGGPCSVGL*QAHSKRSVGTS Trigger: GGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACACTGCAGGGCCCACCTTCTCTCTTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 72 bp | GTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTaGGCACATCCACCGCCCTTCCTGGGGACACCAATG | + |
Preference number: 3 (lower is better) Translates to: VLGCARPTAKGA*AHPPPFLGTPM Trigger: CATTGGTGTCCCCAGGAAGGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 72 bp | GGAGAGGAGCCAGGGAACCATGGAGGCTTGTGGACTTaGCTCGGGAGACTTGTGTGGCCCCTGCAGAGGCTG | + |
Preference number: 3 (lower is better) Translates to: GEEPGNHGGLWT*LGRLVWPLQRL Trigger: CAGCCTCTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR TCA 72 bp | GAGGTGAGTTACGGAGCTGGCCACGGCCAGGGGCTCTaGAGATGGAATGCCAACTTGCTCGGCCCGGGAATG | + |
Preference number: 3 (lower is better) Translates to: EVSYGAGHGQGL*RWNANLLGPGM Trigger: CATTCCCGGGCCGAGCAAGTTGGCATTCCATCTTCAGAGCCCCTGGCCGTGGCCAGCTCCGTAACTCACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR CCA 72 bp | GGCAGCAGAGAAAGCTCCAAGCCTACACTGGGCCTCTaGGCCTCTAGGGCGCCAATGCCACTCTTAGTGGGG | + |
Preference number: 3 (lower is better) Translates to: GSRESSKPTLGL*ASRAPMPLLVG Trigger: CCCCACTAAGAGTGGCATTGGCGCCCTAGAGGCCCAGAGGCCCAGTGTAGGCTTGGAGCTTTCTCTGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 72 bp | CCAGGAGGGTACCCAGGAGAGCAGAGGCTCAAGGGCTaGCAGGAGAGTGACCAAGGTCTACCTTCAGGGCAC | + |
Preference number: 3 (lower is better) Translates to: PGGYPGEQRLKG*QESDQGLPSGH Trigger: GTGCCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGCCCTTGAGCCTCTGCTCTCCTGGGTACCCTCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 72 bp | TCCACAGGAGAGGAGCCAGGGAACCATGGAGGCTTGTaGACTTGGCTCGGGAGACTTGTGTGGCCCCTGCAG | + |
Preference number: 3 (lower is better) Translates to: STGEEPGNHGGL*TWLGRLVWPLQ Trigger: CTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR-3UTR CAA 90 bp | GTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTGGGCACATCCACCGCCCCTGGGTCTCTCAATCTaGCAGCTTTTCCTGGGAGGA | + |
Preference number: 3 (lower is better) Translates to: VLGCARPTAKGAWAHPPPLGLSI*QLFLGG Trigger: TCCTCCCAGGAAAAGCTGCAAGATTGAGAGACCCAG...GGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR GCA 72 bp | CATCAGCTCAGGTCACTGCCTCGTCAGTACTCCTGCTaGCTCTCCCTGATCCCCAGATGGCCCCAGACAGTC | + |
Preference number: 3 (lower is better) Translates to: HQLRSLPRQYSC*LSLIPRWPQTV Trigger: GACTGTCTGGGGCCATCTGGGGATCAGGGAGAGGCAGCAGGAGTACTGACGAGGCAGTGACCTGAGCTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR GCA 72 bp | ACTTGTTTGCTCTGCCCCACTCAGCCTGGGCCAGTGTaGTCAGCTCCAGCTTGGCAAGACAGGAGCCCGTGT | + |
Preference number: 3 (lower is better) Translates to: TCLLCPTQPGPV*SAPAWQDRSPC Trigger: ACACGGGCTCCTGTCTTGCCAAGCTGGAGCTGAGCACACTGGCCCAGGCTGAGTGGGGCAGAGCAAACAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 72 bp | GGCCACTTCCAGACTGCAGGACTTCTCAGTCGGGGATaGCCCTTCCTCTCCCAACTGCAGCTGGGTCTCTCA | + |
Preference number: 3 (lower is better) Translates to: GHFQTAGLLSRG*PFLSQLQLGLS Trigger: TGAGAGACCCAGCTGCAGTTGGGAGAGGAAGGGCCATCCCCGACTGAGAAGTCCTGCAGTCTGGAAGTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 72 bp | ATAGTGTCAGGCCAGCGGATGATGAGGAGCATCAGGTaGGGTCCCTCCTGGGATGACAGTGAGCCGTGGGGT | + |
Preference number: 3 (lower is better) Translates to: IVSGQRMMRSIR*GPSWDDSEPWG Trigger: ACCCCACGGCTCACTGTCATCCCAGGAGGGACCCCACCTGATGCTCCTCATCATCCGCTGGCCTGACACTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR GCA 72 bp | ACTCATCAGCTCAGGTCACTGCCTCGTCAGTACTCCTaGTGCCTCTCCCTGATCCCCAGATGGCCCCAGACA | + |
Preference number: 3 (lower is better) Translates to: THQLRSLPRQYS*CLSLIPRWPQT Trigger: TGTCTGGGGCCATCTGGGGATCAGGGAGAGGCAGCAGGAGTACTGACGAGGCAGTGACCTGAGCTGATGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR GCA 72 bp | CCTCCCTCTAAGGTGAGAGATCCCCTTCCACTTGTTTaGTCTGCCCCACTCAGCCTGGGCCAGTGTGCTCAG | + |
Preference number: 3 (lower is better) Translates to: PPSKVRDPLPLV*SAPLSLGQCAQ Trigger: CTGAGCACACTGGCCCAGGCTGAGTGGGGCAGAGCAAACAAGTGGAAGGGGATCTCTCACCTTAGAGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CCA 72 bp | GCCAGCAGCCAGCCCACTGTAGACTCTGGTGTCCTCTaGTTGACTCATCAGCTCAGGTCACTGCCTCGTCAG | + |
Preference number: 3 (lower is better) Translates to: ASSQPTVDSGVL*LTHQLRSLPRQ Trigger: CTGACGAGGCAGTGACCTGAGCTGATGAGTCAACCAGAGGACACCAGAGTCTACAGTGGGCTGGCTGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR-3UTR CAA 90 bp | GTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTGGGCACATCCACCGCCCTTCAGTCTGGCTCTATaGCAAACTGTAAAGACAGGG | + |
Preference number: 3 (lower is better) Translates to: VLGCARPTAKGAWAHPPPFSLAL*QTVKTG Trigger: CCCTGTCTTTACAGTTTGCAATAGAGCCAGACTGAA...GGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR TCA 72 bp | CGCTGGATCTACACCTTCGGCCACCTCCCTCTAAGGTaGGAGATCCCCTTCCACTTGTTTGCTCTGCCCCAC | + |
Preference number: 3 (lower is better) Translates to: RWIYTFGHLPLR*EIPFHLFALPH Trigger: GTGGGGCAGAGCAAACAAGTGGAAGGGGATCTCTCACCTTAGAGGGAGGTGGCCGAAGGTGTAGATCCAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR TCA 72 bp | GAGGGTGAGATTGGAAATGGGAAGGTCTTGCTGCTATaGAGGTGGCGGGGATGGCAGCTCCCTCGCTGGATC | + |
Preference number: 3 (lower is better) Translates to: EGEIGNGKVLLL*RWRGWQLPRWI Trigger: GATCCAGCGAGGGAGCTGCCATCCCCGCCACCTTCATAGCAGCAAGACCTTCCCATTTCCAATCTCACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR CCA 72 bp | AACAGGACACTCCACAGGAGAGGAGCCAGGGAACCATaGAGGCTTGTGGACTTGGCTCGGGAGACTTGTGTG | + |
Preference number: 3 (lower is better) Translates to: NRTLHRRGAREP*RLVDLARETCV Trigger: CACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGAGTGTCCTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR TCA 72 bp | CTGGTGTGGCCCTGCTCTCAGTCCCCTCGGACTAGATaGCACATGGTAGTTGGCAGCAGAGAAAGCTCCAAG | + |
Preference number: 3 (lower is better) Translates to: LVWPCSQSPRTR*HMVVGSRESSK Trigger: CTTGGAGCTTTCTCTGCTGCCAACTACCATGTGTCATCTAGTCCGAGGGGACTGAGAGCAGGGCCACACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR TCA 72 bp | ACCCTGCTGGACAAGGGCTGCCTAGAGAAGTGTTTCTaGGCTTCTGTGTACAGGCTCTCAGAGGCAGCGGGA | + |
Preference number: 3 (lower is better) Translates to: TLLDKGCLEKCF*ASVYRLSEAAG Trigger: TCCCGCTGCCTCTGAGAGCCTGTACACAGAAGCTCAGAAACACTTCTCTAGGCAGCCCTTGTCCAGCAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR GCA 72 bp | GACTTCTCAGTCGGGGATGGCCCTTCCTCTCCCAACTaGAGCTGGGTCTCTCAATCTTGCAGCTTTTCCTGG | + |
Preference number: 3 (lower is better) Translates to: DFSVGDGPSSPN*SWVSQSCSFSW Trigger: CCAGGAAAAGCTGCAAGATTGAGAGACCCAGCTGCAGTTGGGAGAGGAAGGGCCATCCCCGACTGAGAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR CCA 72 bp | CAGTTCCCAAGCCTGACCTTTTCCTGCCTCCCTGTCTaGGGGACAATGAGCAAGACCAGAGCCCTTACTCCT | + |
Preference number: 3 (lower is better) Translates to: QFPSLTFSCLPV*GTMSKTRALTP Trigger: AGGAGTAAGGGCTCTGGTCTTGCTCATTGTCCCCCAGACAGGGAGGCAGGAAAAGGTCAGGCTTGGGAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR-3UTR CAA 90 bp | CAGGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGTCTGTGACTCAACACTaGGTCTCAGGGGAGTCCTGC | + |
Preference number: 3 (lower is better) Translates to: QARTAVPARALIFKSFWLSVTQH*VSGESC Trigger: GCAGGACTCCCCTGAGACCAAGTGTTGAGTCACAGA...CAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR-3UTR CAA 90 bp | GAGGTGCAGCCAAGGCACCCTGCTGGACAAGGGCTGCCTAGAGAAGTGTTTCTGAGGAGTCATGGTGGCTaGACTGACATTCATGCGTGT | + |
Preference number: 3 (lower is better) Translates to: EVQPRHPAGQGLPREVFLRSHGG*TDIHAC Trigger: ACACGCATGAATGTCAGTCAAGCCACCATGACTCCT...CAGAAACACTTCTCTAGGCAGCCCTTGTCCAGCAGGGTGCCTTGGCTGCACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR TCA 72 bp | AGACTGTGCCTGTCATTTCTGGAGGTCTGGCCTGGGTaGTTTACAGCCCTTCCTTCCCACTGTCCTCTGCTG | + |
Preference number: 3 (lower is better) Translates to: RLCLSFLEVWPG*FTALPSHCPLL Trigger: CAGCAGAGGACAGTGGGAAGGAAGGGCTGTAAATCACCCAGGCCAGACCTCCAGAAATGACAGGCACAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR GCA 72 bp | CCTTCCTCTCCCAACTGCAGCTGGGTCTCTCAATCTTaGAGCTTTTCCTGGGAGGATCTCCAGTTCCCAAGC | + |
Preference number: 3 (lower is better) Translates to: PSSPNCSWVSQS*SFSWEDLQFPS Trigger: GCTTGGGAACTGGAGATCCTCCCAGGAAAAGCTGCAAGATTGAGAGACCCAGCTGCAGTTGGGAGAGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR GCA 72 bp | TGGCTAGTCAGTGAATCCCAGGGATTCACCCATCGCTaGCTCCCTAGTGCTGTGATGACAAGCAGTTGTCCC | + |
Preference number: 3 (lower is better) Translates to: WLVSESQGFTHR*LPSAVMTSSCP Trigger: GGGACAACTGCTTGTCATCACAGCACTAGGGAGGCAGCGATGGGTGAATCCCTGGGATTCACTGACTAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR CCA 72 bp | AGGCAGGGTGTTACCAGCACAAAGGCCCTCTGTGACTaGCTGCCTACAGGTTCTAACAGACTGTGCCTGTCA | + |
Preference number: 3 (lower is better) Translates to: RQGVTSTKALCD*LPTGSNRLCLS Trigger: TGACAGGCACAGTCTGTTAGAACCTGTAGGCAGCCAGTCACAGAGGGCCTTTGTGCTGGTAACACCCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR TCA 72 bp | CCCACTAAGCCACCTCCTCAGTCCTACACCAACTTTTaGAAGGAAGGCTCAGGAGGCCATCAGCAAGCAGAG | + |
Preference number: 3 (lower is better) Translates to: PTKPPPQSYTNF*KEGSGGHQQAE Trigger: CTCTGCTTGCTGATGGCCTCCTGAGCCTTCCTTTCAAAAGTTGGTGTAGGACTGAGGAGGTGGCTTAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR TCA 72 bp | TCCATGGTGTTAAATCTACTTATCTCTGAGGAGCAGTaGGGTGAGTTACGGAGCTGGCCACGGCCAGGGGCT | + |
Preference number: 3 (lower is better) Translates to: SMVLNLLISEEQ*GELRSWPRPGA Trigger: AGCCCCTGGCCGTGGCCAGCTCCGTAACTCACCTCACTGCTCCTCAGAGATAAGTAGATTTAACACCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR GCA 72 bp | CACTCTGTGACTCAACACTTGGTCTCAGGGGAGTCCTaGAAACGCTATGGACAGCCTAGAGTGGAACCTGCT | + |
Preference number: 3 (lower is better) Translates to: HSVTQHLVSGES*KRYGQPRVEPA Trigger: AGCAGGTTCCACTCTAGGCTGTCCATAGCGTTTGCAGGACTCCCCTGAGACCAAGTGTTGAGTCACAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR TCA 72 bp | GCCTCTAAAGCAGGGTGCTCCCAAAAGAGATGGTGGTaGATGGGAAGGCAGGGAACTCATCAGAGGAGAACT | + |
Preference number: 3 (lower is better) Translates to: ASKAGCSQKRWW*MGRQGTHQRRT Trigger: AGTTCTCCTCTGATGAGTTCCCTGCCTTCCCATTCACCACCATCTCTTTTGGGAGCACCCTGCTTTAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR TCA 72 bp | TGGTCAGTGGGTACTAAAAAGAACCCTCTAGAAAGATaGCATCTGGTGTGGCCCTGCTCTCAGTCCCCTCGG | + |
Preference number: 3 (lower is better) Translates to: WSVGTKKNPLER*HLVWPCSQSPR Trigger: CCGAGGGGACTGAGAGCAGGGCCACACCAGATGTCATCTTTCTAGAGGGTTCTTTTTAGTACCCACTGACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR TCA 72 bp | GGGAGAGGCCTAGCTAGCTCACTAGGGGTGGGCAGTTaGAGGTTATATATTGCACGAATCCCTGGCTACAGT | + |
Preference number: 3 (lower is better) Translates to: GRGLASSLGVGS*RLYIARIPGYS Trigger: ACTGTAGCCAGGGATTCGTGCAATATATAACCTTCAACTGCCCACCCCTAGTGAGCTAGCTAGGCCTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR GCA 72 bp | CACGTAGGAACCACAGATGCTGCCCGCATGCTATGGTaGAGTCTTTTTCTCTCCCACCTTCTGATAGTGCTG | + |
Preference number: 3 (lower is better) Translates to: HVGTTDAARMLW*SLFLSHLLIVL Trigger: CAGCACTATCAGAAGGTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGCAGCATCTGTGGTTCCTACGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR CCA 72 bp | CTAAAGCAGGGTGCTCCCAAAAGAGATGGTGGTGAATaGGAAGGCAGGGAACTCATCAGAGGAGAACTCAGG | + |
Preference number: 3 (lower is better) Translates to: LKQGAPKRDGGE*EGRELIRGELR Trigger: CCTGAGTTCTCCTCTGATGAGTTCCCTGCCTTCCCATTCACCACCATCTCTTTTGGGAGCACCCTGCTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR CCA 72 bp | CCTCACGTAGGAACCACAGATGCTGCCCGCATGCTATaGTGCAGTCTTTTTCTCTCCCACCTTCTGATAGTG | + |
Preference number: 3 (lower is better) Translates to: PHVGTTDAARML*CSLFLSHLLIV Trigger: CACTATCAGAAGGTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGCAGCATCTGTGGTTCCTACGTGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR CCA 72 bp | AACTGCAGCTGGGTCTCTCAATCTTGCAGCTTTTCCTaGGAGGATCTCCAGTTCCCAAGCCTGACCTTTTCC | + |
Preference number: 3 (lower is better) Translates to: NCSWVSQSCSFS*EDLQFPSLTFS Trigger: GGAAAAGGTCAGGCTTGGGAACTGGAGATCCTCCCAGGAAAAGCTGCAAGATTGAGAGACCCAGCTGCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR CCA 72 bp | GGCTCAGGAACTGGTTTACCAGAGGAGGCTGGAGGCTaGAGAAGCCTCAGAGTGATGTTGATTCTGCATAGT | + |
Preference number: 3 (lower is better) Translates to: GSGTGLPEEAGG*RSLRVMLILHS Trigger: ACTATGCAGAATCAACATCACTCTGAGGCTTCTCCAGCCTCCAGCCTCCTCTGGTAAACCAGTTCCTGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR CCA 72 bp | AAAATCTGTACTAGGGAAGTGGGAGTCACTGCTGTGTaGGGGGTCACTGCTGTGGCTGATTTAGCCATGCCA | + |
Preference number: 3 (lower is better) Translates to: KICTREVGVTAV*GVTAVADLAMP Trigger: TGGCATGGCTAAATCAGCCACAGCAGTGACCCCCCACACAGCAGTGACTCCCACTTCCCTAGTACAGATTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR-3UTR CAA 90 bp | CTGAGTCTGCCATGTTCCCTAGAGAGGCTACGCTCTCCTCCCTTGTCCCTAGCTAAACAAGAACAGTATTaGGGAAGCTTCCGGTCAGAA | + |
Preference number: 3 (lower is better) Translates to: LSLPCSLERLRSPPLSLAKQEQY*GSFRSE Trigger: TTCTGACCGGAAGCTTCCCAAATACTGTTCTTGTTT...AGCTAGGGACAAGGGAGGAGAGCGTAGCCTCTCTAGGGAACATGGCAGACTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR-3UTR CAA 90 bp | GAGTCTGAGTCTGCCATGTTCCCTAGAGAGGCTACGCTCTCCTCCCTTGTCCCTAGCCTCAGAGTGATGTaGATTCTGCATAGTTCTAGT | + |
Preference number: 3 (lower is better) Translates to: ESESAMFPREATLSSLVPSLRVM*ILHSSS Trigger: ACTAGAACTATGCAGAATCAACATCACTCTGAGGCT...AGGGACAAGGGAGGAGAGCGTAGCCTCTCTAGGGAACATGGCAGACTCAGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR TCA 72 bp | AGGCTACAGGCTTGGGCTGAGGACAGGAAGACAGGCTaGATTCTGATTCCACAGGATTGGCAACTACTTGAG | + |
Preference number: 3 (lower is better) Translates to: RLQAWAEDRKTG*ILIPQDWQLLE Trigger: CTCAAGTAGTTGCCAATCCTGTGGAATCAGAATTCAGCCTGTCTTCCTGTCCTCAGCCCAAGCCTGTAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR TCA 72 bp | CCCATATCCTTTATGCACTACGCACATGGCACTCTGTaGCTCAACACTTGGTCTCAGGGGAGTCCTGCAAAC | + |
Preference number: 3 (lower is better) Translates to: PISFMHYAHGTL*LNTWSQGSPAN Trigger: GTTTGCAGGACTCCCCTGAGACCAAGTGTTGAGTCACAGAGTGCCATGTGCGTAGTGCATAAAGGATATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR TCA 72 bp | GACAGAGTCTGGAGGCCATCCACTTCTAAGTGCTCTTaGAGGTCAAGTGTAGTCAGTCTGTCCCTGGCAACA | + |
Preference number: 3 (lower is better) Translates to: DRVWRPSTSKCS*RSSVVSLSLAT Trigger: TGTTGCCAGGGACAGACTGACTACACTTGACCTTCAAGAGCACTTAGAAGTGGATGGCCTCCAGACTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR GCA 72 bp | AGCAGAGCTCGTCGTTGTATAGGGTACAGATGGCTCTaGTGGCTTACCAAATGCAAGGAGTCATGGTGGCTT | + |
Preference number: 3 (lower is better) Translates to: SRARRCIGYRWL*WLTKCKESWWL Trigger: AAGCCACCATGACTCCTTGCATTTGGTAAGCCAGCAGAGCCATCTGTACCCTATACAACGACGAGCTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR CCA 72 bp | AGGAAGTTCACTGTGTCTGTTCCATGGACAAACAGATaGACCAATCCTCAGGCTTGCCCCATTGGTCAGTGG | + |
Preference number: 3 (lower is better) Translates to: RKFTVSVPWTNR*TNPQACPIGQW Trigger: CCACTGACCAATGGGGCAAGCCTGAGGATTGGTCCATCTGTTTGTCCATGGAACAGACACAGTGAACTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR CCA 72 bp | TTACAGCCCTTCCTTCCCACTGTCCTCTGCTGTTGTTaGAGGTGGGTTAGTTTTCCTTATGTGTCCCTACCC | + |
Preference number: 3 (lower is better) Translates to: LQPFLPTVLCCC*RWVSFPYVSLP Trigger: GGGTAGGGACACATAAGGAAAACTAACCCACCTCCAACAACAGCAGAGGACAGTGGGAAGGAAGGGCTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR CCA 72 bp | GCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTaGCTGAGGAGTCTGAAGCCAGAGCCCACATTTAGA | + |
Preference number: 3 (lower is better) Translates to: AVPARALIFKSF*LRSLKPEPTFR Trigger: TCTAAATGTGGGCTCTGGCTTCAGACTCCTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR CCA 72 bp | AGAGCTCGTCGTTGTATAGGGTACAGATGGCTCTGCTaGCTTACCAAATGCAAGGAGTCATGGTGGCTTGAC | + |
Preference number: 3 (lower is better) Translates to: RARRCIGYRWLC*LTKCKESWWLD Trigger: GTCAAGCCACCATGACTCCTTGCATTTGGTAAGCCAGCAGAGCCATCTGTACCCTATACAACGACGAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR CCA 72 bp | CAAGCCAAAAGTAAACCAGAAGAAAGCCCGACATGGTaGCACATGCCTTTGATTTCAGCACTCAGGGGACCG | + |
Preference number: 3 (lower is better) Translates to: QAKSKPEESPTW*HMPLISALRGP Trigger: CGGTCCCCTGAGTGCTGAAATCAAAGGCATGTGCCACCATGTCGGGCTTTCTTCTGGTTTACTTTTGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR TCA 72 bp | TCCTTCCTTGTCATGACAGACAGCCTCCTAAAACCATaGACCAGAACCATAAACAGTTCCCCCTGGAAGCGG | + |
Preference number: 3 (lower is better) Translates to: SFLVMTDSLLKP*TRTINSSPWKR Trigger: CCGCTTCCAGGGGGAACTGTTTATGGTTCTGGTTCATGGTTTTAGGAGGCTGTCTGTCATGACAAGGAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR TCA 72 bp | AGTTGCCAAAATGATTTAAAGCCAGGAAACTTGGGTTaGGTCGTGGCTCTGGTGCTTAGTGGGGTGACCGAC | + |
Preference number: 3 (lower is better) Translates to: SCQNDLKPGNLG*VVALVLSGVTD Trigger: GTCGGTCACCCCACTAAGCACCAGAGCCACGACTCAACCCAAGTTTCCTGGCTTTAAATCATTTTGGCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR GCA 72 bp | GTTCCATGGACAAACAGATGGACCAATCCTCAGGCTTaGCCCATTGGTCAGTGGGTACTAAAAAGAACCCTC | + |
Preference number: 3 (lower is better) Translates to: VPWTNRWTNPQA*PIGQWVLKRTL Trigger: GAGGGTTCTTTTTAGTACCCACTGACCAATGGGGCAAGCCTGAGGATTGGTCCATCTGTTTGTCCATGGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR GCA 72 bp | CTGGGTGATTTACAGCCCTTCCTTCCCACTGTCCTCTaGTGTTGTTGGAGGTGGGTTAGTTTTCCTTATGTG | + |
Preference number: 3 (lower is better) Translates to: LGDLQPFLPTVL*CCWRWVSFPYV Trigger: CACATAAGGAAAACTAACCCACCTCCAACAACAGCAGAGGACAGTGGGAAGGAAGGGCTGTAAATCACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR GCA 72 bp | TGGGAGAGGATGAAGACCTCTTTCCTACTCTGTCTCTaGTTTGTAAGCAGTGTGACAGGAAGGGAGGGACAT | + |
Preference number: 3 (lower is better) Translates to: WERMKTSFLLCL*FVSSVTGREGH Trigger: ATGTCCCTCCCTTCCTGTCACACTGCTTACAAAGCAGAGACAGAGTAGGAAAGAGGTCTTCATCCTCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR CCA 72 bp | AGTCTAGTATCCAGGAAGTTCACTGTGTCTGTTCCATaGACAAACAGATGGACCAATCCTCAGGCTTGCCCC | + |
Preference number: 3 (lower is better) Translates to: SLVSRKFTVSVP*TNRWTNPQACP Trigger: GGGGCAAGCCTGAGGATTGGTCCATCTGTTTGTCCATGGAACAGACACAGTGAACTTCCTGGATACTAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR-3UTR CAA 90 bp | GTGGCAAACTGTAACCCACAGAAGGCTCCAGGATGTCAGGCTAAACATTCATTTTGTGATGACAAGCAGTaGTCCCTCTCCCCACTAAGC | + |
Preference number: 3 (lower is better) Translates to: VANCNPQKAPGCQAKHSFCDDKQ*SLSPLS Trigger: GCTTAGTGGGGAGAGGGACAACTGCTTGTCATCACA...AAATGAATGTTTAGCCTGACATCCTGGAGCCTTCTGTGGGTTACAGTTTGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR-3UTR CAA 90 bp | ACGGGCAGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTCAGGACTTGTCAACCTaGTTTCTTGAGACAGGGGCT | + |
Preference number: 3 (lower is better) Translates to: TGRKRSSVDNVGIITSHPQDLST*FLETGA Trigger: AGCCCCTGTCTCAAGAAACAAGGTTGACAAGTCCTG...AGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCTGCCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR TCA 72 bp | AGGTATTGTTCTTCAGGACTTGTCAACCTTGTTTCTTaGGACAGGGGCTTGCCTGTCAGTAGGCTAGACTGG | + |
Preference number: 3 (lower is better) Translates to: RYCSSGLVNLVS*DRGLPVSRLDW Trigger: CCAGTCTAGCCTACTGACAGGCAAGCCCCTGTCTCAAGAAACAAGGTTGACAAGTCCTGAAGAACAATACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR TCA 72 bp | GGGAAGCTTCCGGTCAGAACAAGGGCTCTAGTGAACTaGATATGGCCCTTAGTGCATTCTGGGAAAACATCT | + |
Preference number: 3 (lower is better) Translates to: GKLPVRTRALVN*IWPLVHSGKTS Trigger: AGATGTTTTCCCAGAATGCACTAAGGGCCATATTCAGTTCACTAGAGCCCTTGTTCTGACCGGAAGCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR TCA 72 bp | AACACATGTGCACGTGGCTGGAGCCTCACAAAGGAGTaGGAAAGGAGACGGGTAGAAGAGTTATTTGATGAG | + |
Preference number: 3 (lower is better) Translates to: NTCARGWSLTKE*ERRRVEELFDE Trigger: CTCATCAAATAACTCTTCTACCCGTCTCCTTTCTCACTCCTTTGTGAGGCTCCAGCCACGTGCACATGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR-3UTR CAA 90 bp | ACGGGCAGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTAGTGGGGTGACCGACTaGATCTTCAGGGTTTCTTTT | + |
Preference number: 3 (lower is better) Translates to: TGRKRSSVDNVGIITSHPSGVTD*IFRVSF Trigger: AAAAGAAACCCTGAAGATCAAGTCGGTCACCCCACT...AGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCTGCCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR-3UTR CAA 90 bp | AAAGCAAACTGGAAGAAGATGTCACAGAGAAGGACCACTTTGGACTGGGACAAAGTCCTACACCAACTTTaGAAAGGAAGGCTCAGGAGG | + |
Preference number: 3 (lower is better) Translates to: KANWKKMSQRRTTLDWDKVLHQL*KGRLRR Trigger: CCTCCTGAGCCTTCCTTTCAAAAGTTGGTGTAGGAC...TTTGTCCCAGTCCAAAGTGGTCCTTCTCTGTGACATCTTCTTCCAGTTTGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR GCA 72 bp | ATGCCTCCTGATCTATCACCATGTGAACAGTCTCTCTaGCACCATGAACTGAATTGTTCTGCCATCCTTCCT | + |
Preference number: 3 (lower is better) Translates to: MPPDLSPCEQSL*HHELNCSAILP Trigger: AGGAAGGATGGCAGAACAATTCAGTTCATGGTGGCAGAGAGACTGTTCACATGGTGATAGATCAGGAGGCAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
||
3UTR CCA 72 bp | GACAAACAGATGGACCAATCCTCAGGCTTGCCCCATTaGTCAGTGGGTACTAAAAAGAACCCTCTAGAAAGA | + |
Preference number: 3 (lower is better) Translates to: DKQMDQSSGLPH*SVGTKKNPLER Trigger: TCTTTCTAGAGGGTTCTTTTTAGTACCCACTGACCAATGGGGCAAGCCTGAGGATTGGTCCATCTGTTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
||
3UTR CCA 72 bp | ACAAAAACGTTCTTTGATGGTACTTCAGGAAGGAAGTaGCAAACTGTAACCCACAGAAGGCTCCAGGATGTC | + |
Preference number: 3 (lower is better) Translates to: TKTFFDGTSGRK*QTVTHRRLQDV Trigger: GACATCCTGGAGCCTTCTGTGGGTTACAGTTTGCCACTTCCTTCCTGAAGTACCATCAAAGAACGTTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR-3UTR CAA 90 bp | AGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTGCGCATCTGGATCCGTTATCATaGTTAATAAAAGGGCACTCA | + |
Preference number: 3 (lower is better) Translates to: RKRSSVDNVGIITSHPAHLDPLS*LIKGHS Trigger: TGAGTGCCCTTTTATTAACAATGATAACGGATCCAG...ATGCGCAGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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CDS-3UTR TCA 90 bp | GTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTGGGCACATCCACCGCCCCACGGCTGCCATGGCTaGGTAGTTCCCACCGCAGGC | + |
Preference number: 4 (lower is better) Translates to: VLGCARPTAKGAWAHPPPHGCHG*VVPTAG Trigger: GCCTGCGGTGGGAACTACTCAGCCATGGCAGCCGTG...GGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR TCA 90 bp | GGCCCTTCCTCTCCCAACTGCAGCTGGGTCTCTCAATCTTGCAGCTTTTCCTGGGCCGGGCCGCCAGAGTaGGCGCAGCGGCGGAGAGCA | + |
Preference number: 4 (lower is better) Translates to: GPSSPNCSWVSQSCSFSWAGPPE*AQRRRA Trigger: TGCTCTCCGCCGCTGCGCTCACTCTGGCGGCCCGGC...CCAGGAAAAGCTGCAAGATTGAGAGACCCAGCTGCAGTTGGGAGAGGAAGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR GCA 90 bp | GGAAGGTCTTGCTGCTATGAAGGTGGCGGGGATGGCAGCTCCCTCGCTGGATCTTCCCCACCGCAGGGCTaGGTGTGGTCCCCGAAGCAG | + |
Preference number: 4 (lower is better) Translates to: GRSCCYEGGGDGSSLAGSSPPQG*VWSPKQ Trigger: CTGCTTCGGGGACCACACGCAGCCCTGCGGTGGGGA...AGATCCAGCGAGGGAGCTGCCATCCCCGCCACCTTCATAGCAGCAAGACCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CAA 72 bp | AGGAGAGGAGCCAGGGAACCATGGAGGCTTGTGGACTaGGCTCGGGAGACTTGTGTGGCCCCTGCAGAGGCT | + |
Preference number: 4 (lower is better) Translates to: RRGAREPWRLVD*ARETCVAPAEA Trigger: AGCCTCTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CAA 72 bp | CACTCCACAGGAGAGGAGCCAGGGAACCATGGAGGCTaGTGGACTTGGCTCGGGAGACTTGTGTGGCCCCTG | + |
Preference number: 4 (lower is better) Translates to: HSTGEEPGNHGG*WTWLGRLVWPL Trigger: CAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR GCA 90 bp | GGCGCGAGCTCTGATAGTGTCAGGCCAGCGGATGATGAGGAGCATCAGGTGGGGCGAAGCAGACACTATTaGACTCGGTGCTGGCCGCCT | + |
Preference number: 4 (lower is better) Translates to: GASSDSVRPADDEEHQVGRSRHY*TRCWPP Trigger: AGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCG...CCCCACCTGATGCTCCTCATCATCCGCTGGCCTGACACTATCAGAGCTCGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | GGAAGGTCTTGCTGCTATGAAGGTGGCGGGGATGGCAGCTCCCTCGCTGGATCTACACCACGGCTGCCATaGCTGAGTAGTTCCCACCGC | + |
Preference number: 4 (lower is better) Translates to: GRSCCYEGGGDGSSLAGSTPRLP*LSSSHR Trigger: GCGGTGGGAACTACTCAGCCATGGCAGCCGTGGTGT...AGATCCAGCGAGGGAGCTGCCATCCCCGCCACCTTCATAGCAGCAAGACCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | GAGGATCTCCAGTTCCCAAGCCTGACCTTTTCCTGCCTCCCTGTCTGGGGGACAAGCAGGTCTCTCCTGTaGCGGTTCCTCCTTGGTGGC | + |
Preference number: 4 (lower is better) Translates to: EDLQFPSLTFSCLPVWGTSRSLL*RFLLGG Trigger: GCCACCAAGGAGGAACCGCCACAGGAGAGACCTGCT...TGTCCCCCAGACAGGGAGGCAGGAAAAGGTCAGGCTTGGGAACTGGAGATCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | AGCCAGCAGCCAGCCCACTGTAGACTCTGGTGTCCTCTGGTTGACTCATCAGCTGACGGTGCCCAGGAATaGCTACCTGGGGCAGTCTGC | + |
Preference number: 4 (lower is better) Translates to: SQQPAHCRLWCPLVDSSADGAQE*LPGAVC Trigger: GCAGACTGCCCCAGGTAGCCATTCCTGGGCACCGTC...AGCTGATGAGTCAACCAGAGGACACCAGAGTCTACAGTGGGCTGGCTGCTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR TCA 90 bp | GGCGCGAGCTCTGATAGTGTCAGGCCAGCGGATGATGAGGAGCATCAGGTGGGGTTTTACTGGTGCCCGTaGGAGGAGGTGGGTTTCCAT | + |
Preference number: 4 (lower is better) Translates to: GASSDSVRPADDEEHQVGFYWCP*EEVGFH Trigger: ATGGAAACCCACCTCCTCTCACGGGCACCAGTAAAA...CCCCACCTGATGCTCCTCATCATCCGCTGGCCTGACACTATCAGAGCTCGCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | GGAAGGTCTTGCTGCTATGAAGGTGGCGGGGATGGCAGCTCCCTCGCTGGATCTGTTCCAGAACAGACATaGCTTCCCACCTTGCAGCGC | + |
Preference number: 4 (lower is better) Translates to: GRSCCYEGGGDGSSLAGSVPEQT*LPTLQR Trigger: GCGCTGCAAGGTGGGAAGCCATGTCTGTTCTGGAAC...AGATCCAGCGAGGGAGCTGCCATCCCCGCCACCTTCATAGCAGCAAGACCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | GGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGAGCCGCAGGGCTGCGTGTaGTCCCCGAAGCAGACACTA | + |
Preference number: 4 (lower is better) Translates to: GQDSCTRQSFDLQELLAEPQGCV*SPKQTL Trigger: TAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCGG...CTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | CCTGTCAGTAGGCTAGACTGGCTAGTCAGTGAATCCCAGGGATTCACCCATCGCCCGCAGGGCTGCGTGTaGTCCCCGAAGCAGACACTA | + |
Preference number: 4 (lower is better) Translates to: PVSRLDWLVSESQGFTHRPQGCV*SPKQTL Trigger: TAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCGG...GCGATGGGTGAATCCCTGGGATTCACTGACTAGCCAGTCTAGCCTACTGACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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CDS-3UTR CCA 90 bp | AGACAGTCCTGGGGAGCAGCAGCTAGAGGAGAGGCCTCAATGGCAGTGACTGAGGATGCGAGAGGCTCCTaGAACCCGGATGGTCCAGTA | + |
Preference number: 4 (lower is better) Translates to: RQSWGAAARGEASMAVTEDARGS*NPDGPV Trigger: TACTGGACCATCCGGGTTCCAGGAGCCTCTCGCATC...CTCAGTCACTGCCATTGAGGCCTCTCCTCTAGCTGCTGCTCCCCAGGACTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | TCGGCTTACCCCTATGCTCCAGGCAGGGTGTTACCAGCACAAAGGCCCTCTGTGAGGACTTTGGAGGAGTaGGCAGCGCTGACACTGAGG | + |
Preference number: 4 (lower is better) Translates to: SAYPYAPGRVLPAQRPSVRTLEE*AALTLR Trigger: CCTCAGTGTCAGCGCTGCCCACTCCTCCAAAGTCCT...CACAGAGGGCCTTTGTGCTGGTAACACCCTGCCTGGAGCATAGGGGTAAGCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR TCA 90 bp | GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGCTGCCAGGGTCTGGTTaGCAGCAGGTCTCTCCTGTG | + |
Preference number: 4 (lower is better) Translates to: AVPKADLRHQTGHSTGEELPGSG*QQVSPV Trigger: CACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAG...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR GCA 90 bp | GCTGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGCACAGCTGCTGCTGACAAACATGGCTTCCCACCTTaGAGCGCTGTCCAGCTCTGT | + |
Preference number: 4 (lower is better) Translates to: AGRRVTKVYLQGTAAADKHGFPP*SAVQLC Trigger: ACAGAGCTGGACAGCGCTGCAAGGTGGGAAGCCATG...TTTGTCAGCAGCAGCTGTGCCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | TGCCCGCATGCTATGGTGCAGTCTTTTTCTCTCCCACCTTCTGATAGTGCTGGGCCACTCTGTGGCTGTTaGCCCCAACTGACGGTGCCC | + |
Preference number: 4 (lower is better) Translates to: CPHAMVQSFSLPPSDSAGPLCGC*PQLTVP Trigger: GGGCACCGTCAGTTGGGGCCAACAGCCACAGAGTGG...CCCAGCACTATCAGAAGGTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR GCA 90 bp | AGCCAGCAGCCAGCCCACTGTAGACTCTGGTGTCCTCTGGTTGACTCATCAGCTACACTGAGGTTGGCTTaGTCGGTGATCACCTCTGCC | + |
Preference number: 4 (lower is better) Translates to: SQQPAHCRLWCPLVDSSATLRLA*SVITSA Trigger: GGCAGAGGTGATCACCGAGCAAGCCAACCTCAGTGT...AGCTGATGAGTCAACCAGAGGACACCAGAGTCTACAGTGGGCTGGCTGCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CAA 72 bp | AGCAGCCAGCCCACTGTAGACTCTGGTGTCCTCTGGTaGACTCATCAGCTCAGGTCACTGCCTCGTCAGTAC | + |
Preference number: 4 (lower is better) Translates to: SSQPTVDSGVLW*THQLRSLPRQY Trigger: GTACTGACGAGGCAGTGACCTGAGCTGATGAGTCAACCAGAGGACACCAGAGTCTACAGTGGGCTGGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CAA 72 bp | GGCCCACAGGCCAGGACAGCTGTACCCGCCAGAGCTTaGATCTTCAAGAGCTTTTGGCTGAGGAGTCTGAAG | + |
Preference number: 4 (lower is better) Translates to: GPQARTAVPARA*IFKSFWLRSLK Trigger: CTTCAGACTCCTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTGTGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR TCA 90 bp | GAGGTGCAGCCAAGGCACCCTGCTGGACAAGGGCTGCCTAGAGAAGTGTTTCTGCCATCCCAGCAAACTTaGATCTCTGACTCCGACAGA | + |
Preference number: 4 (lower is better) Translates to: EVQPRHPAGQGLPREVFLPSQQT*ISDSDR Trigger: TCTGTCGGAGTCAGAGATTCAAGTTTGCTGGGATGG...CAGAAACACTTCTCTAGGCAGCCCTTGTCCAGCAGGGTGCCTTGGCTGCACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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CDS-3UTR GCA 90 bp | GTGGCAAACTGTAACCCACAGAAGGCTCCAGGATGTCAGGCTAAACATTCATTTTCCCCACCGCAGGGCTaGGTGTGGTCCCCGAAGCAG | + |
Preference number: 4 (lower is better) Translates to: VANCNPQKAPGCQAKHSFSPPQG*VWSPKQ Trigger: CTGCTTCGGGGACCACACGCAGCCCTGCGGTGGGGA...AAATGAATGTTTAGCCTGACATCCTGGAGCCTTCTGTGGGTTACAGTTTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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CDS-3UTR GCA 90 bp | CTGGGTGATTTACAGCCCTTCCTTCCCACTGTCCTCTGCTGTTGTTGGAGGTGGTCCAGTAGCAGACTCTaGCAGTGGCGTAGGTGTCAG | + |
Preference number: 4 (lower is better) Translates to: LGDLQPFLPTVLCCCWRWSSSRL*QWRRCQ Trigger: CTGACACCTACGCCACTGGCAGAGTCTGCTACTGGA...CCACCTCCAACAACAGCAGAGGACAGTGGGAAGGAAGGGCTGTAAATCACCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR GCA 90 bp | GGAGAGCAGAGGCTCAAGGGCTGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGCAGCTCCACCATGTCTaGAGAGTCCCTGATATCAAA | + |
Preference number: 4 (lower is better) Translates to: GEQRLKGWQESDQGLPSGQLHHV*RVPDIK Trigger: TTTGATATCAGGGACTCTGCAGACATGGTGGAGCTG...CCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGCCCTTGAGCCTCTGCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | GGAGAGCAGAGGCTCAAGGGCTGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGGTGTTGTACGGATGCTaGAAAGTCTCGTTCCAGAAC | + |
Preference number: 4 (lower is better) Translates to: GEQRLKGWQESDQGLPSGVLYGC*KVSFQN Trigger: GTTCTGGAACGAGACTTTCCAGCATCCGTACAACAC...CCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGCCCTTGAGCCTCTGCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | CTGGGTGATTTACAGCCCTTCCTTCCCACTGTCCTCTGCTGTTGTTGGAGGTGGCATCCTTCCACTCTGTaGCTGTTGGCCCCAACTGAC | + |
Preference number: 4 (lower is better) Translates to: LGDLQPFLPTVLCCCWRWHPSTL*LLAPTD Trigger: GTCAGTTGGGGCCAACAGCCACAGAGTGGAAGGATG...CCACCTCCAACAACAGCAGAGGACAGTGGGAAGGAAGGGCTGTAAATCACCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CAA 72 bp | CCCTTCCTCTCCCAACTGCAGCTGGGTCTCTCAATCTaGCAGCTTTTCCTGGGAGGATCTCCAGTTCCCAAG | + |
Preference number: 4 (lower is better) Translates to: PFLSQLQLGLSI*QLFLGGSPVPK Trigger: CTTGGGAACTGGAGATCCTCCCAGGAAAAGCTGCAAGATTGAGAGACCCAGCTGCAGTTGGGAGAGGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR TCA 90 bp | GACTCTGGTGTCCTCTGGTTGACTCATCAGCTCAGGTCACTGCCTCGTCAGTACGAAGCAGGCATAGCCTaGCTCCATCCCAGCAAACTT | + |
Preference number: 4 (lower is better) Translates to: DSGVLWLTHQLRSLPRQYEAGIA*LHPSKL Trigger: AAGTTTGCTGGGATGGAGTCAGGCTATGCCTGCTTC...GTACTGACGAGGCAGTGACCTGAGCTGATGAGTCAACCAGAGGACACCAGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR TCA 90 bp | GAGGATCTCCAGTTCCCAAGCCTGACCTTTTCCTGCCTCCCTGTCTGGGGGACAATCCCTGGGCCTGATTaGTGCGATCAGAGAAGAAAT | + |
Preference number: 4 (lower is better) Translates to: EDLQFPSLTFSCLPVWGTIPGPD*CDQRRN Trigger: ATTTCTTCTCTGATCGCATCAATCAGGCCCAGGGAT...TGTCCCCCAGACAGGGAGGCAGGAAAAGGTCAGGCTTGGGAACTGGAGATCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR TCA 90 bp | GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGGCAAATCCCTGGGCCTaGTTGATGCGATCAGAGAAG | + |
Preference number: 4 (lower is better) Translates to: AVPKADLRHQTGHSTGEEANPWA*LMRSEK Trigger: CTTCTCTGATCGCATCAATCAGGCCCAGGGATTTGC...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR GCA 90 bp | GGAAGGTCTTGCTGCTATGAAGGTGGCGGGGATGGCAGCTCCCTCGCTGGATCTAATCTTTGCGACAACTaGTGTGACTGTGAGGATGAG | + |
Preference number: 4 (lower is better) Translates to: GRSCCYEGGGDGSSLAGSNLCDN*CDCEDE Trigger: CTCATCCTCACAGTCACAGCAGTTGTCGCAAAGATT...AGATCCAGCGAGGGAGCTGCCATCCCCGCCACCTTCATAGCAGCAAGACCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | CACTATACCTCCCCACCACCCAAGAGTCTTCTGGAGTCAGGTCCAGCTGTGTCCAGGTTTCCAGGCATCTaGCAGGCAGGAATTTCACAG | + |
Preference number: 4 (lower is better) Translates to: HYTSPPPKSLLESGPAVSRFPGI*QAGISQ Trigger: CTGTGAAATTCCTGCCTGCCAGATGCCTGGAAACCT...GGACACAGCTGGACCTGACTCCAGAAGACTCTTGGGTGGTGGGGAGGTATAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | ACTTTTGAAAGGAAGGCTCAGGAGGCCATCAGCAAGCAGAGTCCCGGTTCCCTGGCCCGTGAGAGGAGGTaGGTTTCCATGATCCTTGTA | + |
Preference number: 4 (lower is better) Translates to: TFERKAQEAISKQSPGSLARERR*VSMILV Trigger: TACAAGGATCATGGAAACCCACCTCCTCTCACGGGC...CAGGGAACCGGGACTCTGCTTGCTGATGGCCTCCTGAGCCTTCCTTTCAAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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CDS-3UTR CCA 90 bp | CCCACATTTAGAGAAGTCCAGAGCTCTGTTCTCCTTGCTCACTTTAGGCAGCCGCTCCTGGAACCCGGATaGTCCAGTAGCAGACTCTGC | + |
Preference number: 4 (lower is better) Translates to: PTFREVQSSVLLAHFRQPLLEPG*SSSRLC Trigger: GCAGAGTCTGCTACTGGACCATCCGGGTTCCAGGAG...CGGCTGCCTAAAGTGAGCAAGGAGAACAGAGCTCTGGACTTCTCTAAATGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | GGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGAGGCGGTTCCTCCTTGGTaGCTTGGTACAACACAGCAA | + |
Preference number: 4 (lower is better) Translates to: GQDSCTRQSFDLQELLAEAVPPW*LGTTQQ Trigger: TTGCTGTGTTGTACCAAGCCACCAAGGAGGAACCGC...CTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CAA 72 bp | CTGCCATGTTCCCTAGAGAGGCTACGCTCTCCTCCCTaGTCCCTAGCTGATAGTGCAATTTGGGAAGGCTGT | + |
Preference number: 4 (lower is better) Translates to: LPCSLERLRSPP*SLADSAIWEGC Trigger: ACAGCCTTCCCAAATTGCACTATCAGCTAGGGACAAGGGAGGAGAGCGTAGCCTCTCTAGGGAACATGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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CDS-3UTR TCA 90 bp | CTGGGTGATTTACAGCCCTTCCTTCCCACTGTCCTCTGCTGTTGTTGGAGGTGGCCATCCCAGCAAACTTaGATCTCTGACTCCGACAGA | + |
Preference number: 4 (lower is better) Translates to: LGDLQPFLPTVLCCCWRWPSQQT*ISDSDR Trigger: TCTGTCGGAGTCAGAGATTCAAGTTTGCTGGGATGG...CCACCTCCAACAACAGCAGAGGACAGTGGGAAGGAAGGGCTGTAAATCACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR TCA 90 bp | CCACTCTTAGTGGGGAACCAGGCCAGCCTAGAAAACCTGACAGTTCTTTCAGTCAATCCAGAGAGACATTaGAAGACAGAGGCGGGCGGC | + |
Preference number: 4 (lower is better) Translates to: PLLVGNQASLENLTVLSVNPERH*KTEAGG Trigger: GCCGCCCGCCTCTGTCTTTCAATGTCTCTCTGGATT...GACTGAAAGAACTGTCAGGTTTTCTAGGCTGGCCTGGTTCCCCACTAAGAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR GCA 90 bp | GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGAGCGTGTTGTACGGATaGTGGAAAGTCTCGTTCCAG | + |
Preference number: 4 (lower is better) Translates to: AVPKADLRHQTGHSTGEESVLYG*WKVSFQ Trigger: CTGGAACGAGACTTTCCAGCATCCGTACAACACGCT...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | ACTTTTGAAAGGAAGGCTCAGGAGGCCATCAGCAAGCAGAGTCCCGGTTCCCTGAGGTTTCCAGGCATCTaGCAGGCAGGAATTTCACAG | + |
Preference number: 4 (lower is better) Translates to: TFERKAQEAISKQSPGSLRFPGI*QAGISQ Trigger: CTGTGAAATTCCTGCCTGCCAGATGCCTGGAAACCT...CAGGGAACCGGGACTCTGCTTGCTGATGGCCTCCTGAGCCTTCCTTTCAAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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CDS-3UTR CCA 90 bp | CCACTCTTAGTGGGGAACCAGGCCAGCCTAGAAAACCTGACAGTTCTTTCAGTCGCCCGTGAGAGGAGGTaGGTTTCCATGATCCTTGTA | + |
Preference number: 4 (lower is better) Translates to: PLLVGNQASLENLTVLSVARERR*VSMILV Trigger: TACAAGGATCATGGAAACCCACCTCCTCTCACGGGC...GACTGAAAGAACTGTCAGGTTTTCTAGGCTGGCCTGGTTCCCCACTAAGAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | TGCCCGCATGCTATGGTGCAGTCTTTTTCTCTCCCACCTTCTGATAGTGCTGGGTCCTCCTTGGTGGCTTaGTACAACACAGCAAATCCC | + |
Preference number: 4 (lower is better) Translates to: CPHAMVQSFSLPPSDSAGSSLVA*YNTANP Trigger: GGGATTTGCTGTGTTGTACCAAGCCACCAAGGAGGA...CCCAGCACTATCAGAAGGTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR GCA 90 bp | TTACCAGCACAAAGGCCCTCTGTGACTGGCTGCCTACAGGTTCTAACAGACTGTTGTTCCCCTGTAATCTaGACCGTTGGCTGTGAAGCA | + |
Preference number: 4 (lower is better) Translates to: LPAQRPSVTGCLQVLTDCCSPVI*TVGCEA Trigger: TGCTTCACAGCCAACGGTGCAGATTACAGGGGAACA...ACAGTCTGTTAGAACCTGTAGGCAGCCAGTCACAGAGGGCCTTTGTGCTGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | CAGGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGGCTCACGTCTCCATCTaGATTTCTGCAATAATTGTG | + |
Preference number: 4 (lower is better) Translates to: QARTAVPARALIFKSFWLAHVSI*ISAIIV Trigger: CACAATTATTGCAGAAATCCAGATGGAGACGTGAGC...CAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CCA 90 bp | AAGTCTAGTATCCAGGAAGTTCACTGTGTCTGTTCCATGGACAAACAGATGGACACCTCTGCCAGGGTCTaGTTGACAGCAGGTCTCTCC | + |
Preference number: 4 (lower is better) Translates to: KSSIQEVHCVCSMDKQMDTSARV*LTAGLS Trigger: GGAGAGACCTGCTGTCAACCAGACCCTGGCAGAGGT...GTCCATCTGTTTGTCCATGGAACAGACACAGTGAACTTCCTGGATACTAGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CAA 72 bp | GACACCTCAGGTATTGTTCTTCAGGACTTGTCAACCTaGTTTCTTGAGACAGGGGCTTGCCTGTCAGTAGGC | + |
Preference number: 4 (lower is better) Translates to: DTSGIVLQDLST*FLETGACLSVG Trigger: GCCTACTGACAGGCAAGCCCCTGTCTCAAGAAACAAGGTTGACAAGTCCTGAAGAACAATACCTGAGGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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CDS-3UTR TCA 90 bp | CTTAGCACAAACAAGAACAGTATTTGGGAAGCTTCCGGTCAGAACAAGGGCTCTGAAGCAGGCATAGCCTaGCTCCATCCCAGCAAACTT | + |
Preference number: 4 (lower is better) Translates to: LSTNKNSIWEASGQNKGSEAGIA*LHPSKL Trigger: AAGTTTGCTGGGATGGAGTCAGGCTATGCCTGCTTC...AGAGCCCTTGTTCTGACCGGAAGCTTCCCAAATACTGTTCTTGTTTGTGCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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3UTR CAA 72 bp | TGTTCCATGGACAAACAGATGGACCAATCCTCAGGCTaGCCCCATTGGTCAGTGGGTACTAAAAAGAACCCT | + |
Preference number: 4 (lower is better) Translates to: CSMDKQMDQSSG*PHWSVGTKKNP Trigger: AGGGTTCTTTTTAGTACCCACTGACCAATGGGGCAAGCCTGAGGATTGGTCCATCTGTTTGTCCATGGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR TCA 90 bp | AAAGCAAACTGGAAGAAGATGTCACAGAGAAGGACCACTTTGGACTGGGACAAATTTTACTGGTGCCCGTaGGAGGAGGTGGGTTTCCAT | + |
Preference number: 4 (lower is better) Translates to: KANWKKMSQRRTTLDWDKFYWCP*EEVGFH Trigger: ATGGAAACCCACCTCCTCTCACGGGCACCAGTAAAA...TTTGTCCCAGTCCAAAGTGGTCCTTCTCTGTGACATCTTCTTCCAGTTTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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CDS-3UTR CCA 90 bp | CAGGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGAAGGTTCATAGAAAATaGTCCAGATATCTCCAGAAG | + |
Preference number: 4 (lower is better) Translates to: QARTAVPARALIFKSFWLKVHRK*SRYLQK Trigger: CTTCTGGAGATATCTGGACCATTTTCTATGAACCTT...CAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR GCA 90 bp | GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGGATTTAAATGTGACATaGAGAAGAATCTTTGCGACA | + |
Preference number: 4 (lower is better) Translates to: AVPKADLRHQTGHSTGEEDLNVT*RRIFAT Trigger: TGTCGCAAAGATTCTTCTGCATGTCACATTTAAATC...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR GCA 90 bp | AAGTCTAGTATCCAGGAAGTTCACTGTGTCTGTTCCATGGACAAACAGATGGACCACTCACGAGGGGATTaGGGTCATCTTGTTGACTCT | + |
Preference number: 4 (lower is better) Translates to: KSSIQEVHCVCSMDKQMDHSRGD*GHLVDS Trigger: AGAGTCAACAAGATGACCGCAATCCCCTCGTGAGTG...GTCCATCTGTTTGTCCATGGAACAGACACAGTGAACTTCCTGGATACTAGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR GCA 90 bp | ATGTGGACAAAACAGAGAAGAAGCAAGAAAACTCATCCTACACTATACCTCCCCCTCCATCTGGATTTCTaGAATAATTGTGCTCGCCCA | + |
Preference number: 4 (lower is better) Translates to: MWTKQRRSKKTHPTLYLPLHLDF*NNCARP Trigger: TGGGCGAGCACAATTATTGCAGAAATCCAGATGGAG...GGGGAGGTATAGTGTAGGATGAGTTTTCTTGCTTCTTCTCTGTTTTGTCCACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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3UTR CAA 72 bp | CCTAGAAAACCTGACAGTTCTTTCAGTCTGGCTCTATaGCAAACTGTAAAGACAGGGGAAACCGATCTGTAT | + |
Preference number: 4 (lower is better) Translates to: PRKPDSSFSLAL*QTVKTGETDLY Trigger: ATACAGATCGGTTTCCCCTGTCTTTACAGTTTGCAATAGAGCCAGACTGAAAGAACTGTCAGGTTTTCTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CAA 90 bp | GTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTGGGCACATCCACCGCCCGCGCTGACACTGAGGTaGGCTTGCTCGGTGATCACC | + |
Preference number: 5 (lower is better) Translates to: VLGCARPTAKGAWAHPPPALTLR*ACSVIT Trigger: GGTGATCACCGAGCAAGCCAACCTCAGTGTCAGCGC...GGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS TCA 90 bp | GCCGTACACAGTCCATCCTTCCACTCTGTGGCTGTTGGCCCCAACTaGCGGTGCCCAGGAATGGCTACCTGGGGCAGTCTGCGGAGGGTG | + |
Preference number: 5 (lower is better) Translates to: AVHSPSFHSVAVGPN*RCPGMATWGSLRRV Trigger: CACCCTCCGCAGACTGCCCCAGGTAGCCATTCCTGGGCACCGTCAGTTGGGGCCAACAGCCACAGAGTGGAAGGATGGACTGTGTACGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS GCA 90 bp | CGCAGGGCTGCGTGTGGTCCCCGAAGCAGACACTATTGCACTCGGTaGTGGCCGCCTCCCCGTGCTTCCAGTAGTCAGGATTGTTCCCAC | + |
Preference number: 5 (lower is better) Translates to: RRAACGPRSRHYCTR*WPPPRASSSQDCSH Trigger: GTGGGAACAATCCTGACTACTGGAAGCACGGGGAGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020662.15 ENSMUST00000151978.2 |
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CDS CCA 90 bp | GTGTCAAAGAGGATAATCCTGCCGTCCCCACCGCAGGGCTGCGTGTaGTCCCCGAAGCAGACACTATTGCACTCGGTGCTGGCCGCCTCC | + |
Preference number: 5 (lower is better) Translates to: VSKRIILPSPPQGCV*SPKQTLLHSVLAAS Trigger: GGAGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCGGTGGGGACGGCAGGATTATCCTCTTTGACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020662.15 ENSMUST00000151978.2 |
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CDS GCA 90 bp | GGATGCGAGAGGCTCCTGGAACCCGGATGGTCCAGTAGCAGACTCTaGCAGTGGCGTAGGTGTCAGGGAAGTCAGGGGAGTACACCACGG | + |
Preference number: 5 (lower is better) Translates to: GCERLLEPGWSSSRL*QWRRCQGSQGSTPR Trigger: CCGTGGTGTACTCCCCTGACTTCCCTGACACCTACGCCACTGGCAGAGTCTGCTACTGGACCATCCGGGTTCCAGGAGCCTCTCGCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 90 bp | GAGAGGCTCCTGGAACCCGGATGGTCCAGTAGCAGACTCTGCCAGTaGCGTAGGTGTCAGGGAAGTCAGGGGAGTACACCACGGCTGCCA | + |
Preference number: 5 (lower is better) Translates to: ERLLEPGWSSSRLCQ*RRCQGSQGSTPRLP Trigger: TGGCAGCCGTGGTGTACTCCCCTGACTTCCCTGACACCTACGCCACTGGCAGAGTCTGCTACTGGACCATCCGGGTTCCAGGAGCCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS GCA 90 bp | ACGAGAGTGTCAAAGAGGATAATCCTGCCGTCCCCACCGCAGGGCTaGGTGTGGTCCCCGAAGCAGACACTATTGCACTCGGTGCTGGCC | + |
Preference number: 5 (lower is better) Translates to: TRVSKRIILPSPPQG*VWSPKQTLLHSVLA Trigger: GGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCGGTGGGGACGGCAGGATTATCCTCTTTGACACTCTCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 90 bp | AGGGCTGCGTGTGGTCCCCGAAGCAGACACTATTGCACTCGGTGCTaGCCGCCTCCCCGTGCTTCCAGTAGTCAGGATTGTTCCCACAGA | + |
Preference number: 5 (lower is better) Translates to: RAACGPRSRHYCTRC*PPPRASSSQDCSHR Trigger: TCTGTGGGAACAATCCTGACTACTGGAAGCACGGGGAGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACACGCAGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020662.15 ENSMUST00000151978.2 |
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CDS CCA 90 bp | TGGCGTAGGTGTCAGGGAAGTCAGGGGAGTACACCACGGCTGCCATaGCTGAGTAGTTCCCACCGCAGGCGCCCACGAGAGTGTCAAAGA | + |
Preference number: 5 (lower is better) Translates to: WRRCQGSQGSTPRLP*LSSSHRRRPRECQR Trigger: TCTTTGACACTCTCGTGGGCGCCTGCGGTGGGAACTACTCAGCCATGGCAGCCGTGGTGTACTCCCCTGACTTCCCTGACACCTACGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS TCA 90 bp | GTAGGTGTCAGGGAAGTCAGGGGAGTACACCACGGCTGCCATGGCTaGGTAGTTCCCACCGCAGGCGCCCACGAGAGTGTCAAAGAGGAT | + |
Preference number: 5 (lower is better) Translates to: VGVREVRGVHHGCHG*VVPTAGAHESVKED Trigger: ATCCTCTTTGACACTCTCGTGGGCGCCTGCGGTGGGAACTACTCAGCCATGGCAGCCGTGGTGTACTCCCCTGACTTCCCTGACACCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 90 bp | CTGACACTGAGGTTGGCTTGCTCGGTGATCACCTCTGCCAGGGTCTaGTTGACAGCAGGTCTCTCCTGTGGCGGTTCCTCCTTGGTGGCT | + |
Preference number: 5 (lower is better) Translates to: LTLRLACSVITSARV*LTAGLSCGGSSLVA Trigger: AGCCACCAAGGAGGAACCGCCACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAGAGGTGATCACCGAGCAAGCCAACCTCAGTGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CAA 90 bp | GGAGAGCAGAGGCTCAAGGGCTGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGTCTGCCAGGGTCTGGTaGACAGCAGGTCTCTCCTGT | + |
Preference number: 5 (lower is better) Translates to: GEQRLKGWQESDQGLPSGSARVW*TAGLSC Trigger: ACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAGA...CCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGCCCTTGAGCCTCTGCTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CAA 90 bp | TGCCCGCATGCTATGGTGCAGTCTTTTTCTCTCCCACCTTCTGATAGTGCTGGGCCGAAGCAGACACTATaGCACTCGGTGCTGGCCGCC | + |
Preference number: 5 (lower is better) Translates to: CPHAMVQSFSLPPSDSAGPKQTL*HSVLAA Trigger: GGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGG...CCCAGCACTATCAGAAGGTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS GCA 90 bp | CCCAGTCCTCCTTCCCCGTTGGGGTACTTCAGCGTGTTGTACGGATaGTGGAAAGTCTCGTTCCAGAACAGACATGGCTTCCCACCTTGC | + |
Preference number: 5 (lower is better) Translates to: PSPPSPLGYFSVLYG*WKVSFQNRHGFPPC Trigger: GCAAGGTGGGAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGAAGGAGGACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS GCA 90 bp | GACCAGGACGCGGTGGGTGTAGCCGTCCAGCAGCTCCACCATGTCTaGAGAGTCCCTGATATCAAACAGGGTGAAGTTGAAATGGATGCG | + |
Preference number: 5 (lower is better) Translates to: DQDAVGVAVQQLHHV*RVPDIKQGEVEMDA Trigger: CGCATCCATTTCAACTTCACCCTGTTTGATATCAGGGACTCTGCAGACATGGTGGAGCTGCTGGACGGCTACACCCACCGCGTCCTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CAA 90 bp | TGCCCGCATGCTATGGTGCAGTCTTTTTCTCTCCCACCTTCTGATAGTGCTGGGACATGGCTTCCCACCTaGCAGCGCTGTCCAGCTCTG | + |
Preference number: 5 (lower is better) Translates to: CPHAMVQSFSLPPSDSAGTWLPT*QRCPAL Trigger: CAGAGCTGGACAGCGCTGCAAGGTGGGAAGCCATGT...CCCAGCACTATCAGAAGGTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CAA 90 bp | AGACAGTCCTGGGGAGCAGCAGCTAGAGGAGAGGCCTCAATGGCAGTGACTGAGGGGATTGCGGTCATCTaGTTGACTCTGACCCTTGAG | + |
Preference number: 5 (lower is better) Translates to: RQSWGAAARGEASMAVTEGIAVI*LTLTLE Trigger: CTCAAGGGTCAGAGTCAACAAGATGACCGCAATCCC...CTCAGTCACTGCCATTGAGGCCTCTCCTCTAGCTGCTGCTCCCCAGGACTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 90 bp | CAGCGTGTTGTACGGATGCTGGAAAGTCTCGTTCCAGAACAGACATaGCTTCCCACCTTGCAGCGCTGTCCAGCTCTGTGTTCCCCTGTA | + |
Preference number: 5 (lower is better) Translates to: QRVVRMLESLVPEQT*LPTLQRCPALCSPV Trigger: TACAGGGGAACACAGAGCTGGACAGCGCTGCAAGGTGGGAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCGTACAACACGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 90 bp | AGTCCTCCTTCCCCGTTGGGGTACTTCAGCGTGTTGTACGGATGCTaGAAAGTCTCGTTCCAGAACAGACATGGCTTCCCACCTTGCAGC | + |
Preference number: 5 (lower is better) Translates to: SPPSPLGYFSVLYGC*KVSFQNRHGFPPCS Trigger: GCTGCAAGGTGGGAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGAAGGAGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 90 bp | CCTGATATCAAACAGGGTGAAGTTGAAATGGATGCGAGAGGCTCCTaGAACCCGGATGGTCCAGTAGCAGACTCTGCCAGTGGCGTAGGT | + |
Preference number: 5 (lower is better) Translates to: PDIKQGEVEMDARGS*NPDGPVADSASGVG Trigger: ACCTACGCCACTGGCAGAGTCTGCTACTGGACCATCCGGGTTCCAGGAGCCTCTCGCATCCATTTCAACTTCACCCTGTTTGATATCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CAA 90 bp | TTCAGCACTCAGGGGACCGAGGCAGGCAGGTCTCTGAGTTCAGGCCAGCCTGGTGTTTGTATGGTGAGCTaGTTAGAGGTTTTACTGGTG | + |
Preference number: 5 (lower is better) Translates to: FSTQGTEAGRSLSSGQPGVCMVS*LEVLLV Trigger: CACCAGTAAAACCTCTAACAAGCTCACCATACAAAC...ACCAGGCTGGCCTGAACTCAGAGACCTGCCTGCCTCGGTCCCCTGAGTGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151978.2 |
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CDS-3UTR CAA 90 bp | GAGGATCTCCAGTTCCCAAGCCTGACCTTTTCCTGCCTCCCTGTCTGGGGGACAATTGCGGTCATCTTGTaGACTCTGACCCTTGAGCTT | + |
Preference number: 5 (lower is better) Translates to: EDLQFPSLTFSCLPVWGTIAVIL*TLTLEL Trigger: AAGCTCAAGGGTCAGAGTCAACAAGATGACCGCAAT...TGTCCCCCAGACAGGGAGGCAGGAAAAGGTCAGGCTTGGGAACTGGAGATCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 90 bp | CTGGATTTCTGCAATAATTGTGCTCGCCCAGTCCTCCTTCCCCGTTaGGGTACTTCAGCGTGTTGTACGGATGCTGGAAAGTCTCGTTCC | + |
Preference number: 5 (lower is better) Translates to: LDFCNNCARPVLLPR*GTSACCTDAGKSRS Trigger: GGAACGAGACTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGAAGGAGGACTGGGCGAGCACAATTATTGCAGAAATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CAA 90 bp | TGCCCGCATGCTATGGTGCAGTCTTTTTCTCTCCCACCTTCTGATAGTGCTGGGGGGTACTTCAGCGTGTaGTACGGATGCTGGAAAGTC | + |
Preference number: 5 (lower is better) Translates to: CPHAMVQSFSLPPSDSAGGYFSV*YGCWKV Trigger: GACTTTCCAGCATCCGTACAACACGCTGAAGTACCC...CCCAGCACTATCAGAAGGTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGCA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CAA 90 bp | CAGGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGTCAAACAGGGTGAAGTaGAAATGGATGCGAGAGGCT | + |
Preference number: 5 (lower is better) Translates to: QARTAVPARALIFKSFWLSNRVK*KWMREA Trigger: AGCCTCTCGCATCCATTTCAACTTCACCCTGTTTGA...CAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CAA 90 bp | CCCACATTTAGAGAAGTCCAGAGCTCTGTTCTCCTTGCTCACTTTAGGCAGCCGAAATCCAGAGAGACATaGAAAGACAGAGGCGGGCGG | + |
Preference number: 5 (lower is better) Translates to: PTFREVQSSVLLAHFRQPKSRET*KDRGGR Trigger: CCGCCCGCCTCTGTCTTTCAATGTCTCTCTGGATTT...CGGCTGCCTAAAGTGAGCAAGGAGAACAGAGCTCTGGACTTCTCTAAATGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS TCA 90 bp | GTGCTTCCAGTAGTCAGGATTGTTCCCACAGAAGCAGGCATAGCCTaGCTCCATCCCAGCAAACTTGAATCTCTGACTCCGACAGAAGCT | + |
Preference number: 5 (lower is better) Translates to: VLPVVRIVPTEAGIA*LHPSKLESLTPTEA Trigger: AGCTTCTGTCGGAGTCAGAGATTCAAGTTTGCTGGGATGGAGTCAGGCTATGCCTGCTTCTGTGGGAACAATCCTGACTACTGGAAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020662.15 ENSMUST00000151978.2 |
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CDS GCA 90 bp | TGCAGGGACTCGATGAGATTTAAATGTGACATGCAGAAGAATCTTTaGGACAACTGCTGTGACTGTGAGGATGAGGAGGGTCGCCAGGCC | + |
Preference number: 5 (lower is better) Translates to: CRDSMRFKCDMQKNL*DNCCDCEDEEGRQA Trigger: GGCCTGGCGACCCTCCTCATCCTCACAGTCACAGCAGTTGTCGCAAAGATTCTTCTGCATGTCACATTTAAATCTCATCGAGTCCCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 90 bp | TATGGTGAGCTTGTTAGAGGTTTTACTGGTGCCCGTGAGAGGAGGTaGGTTTCCATGATCCTTGTAGCAGCCAAGGTTTCCAGGCATCTG | + |
Preference number: 5 (lower is better) Translates to: YGELVRGFTGARERR*VSMILVAAKVSRHL Trigger: CAGATGCCTGGAAACCTTGGCTGCTACAAGGATCATGGAAACCCACCTCCTCTCACGGGCACCAGTAAAACCTCTAACAAGCTCACCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020662.15 ENSMUST00000151978.2 |
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CDS-3UTR CAA 90 bp | GACTCTGGTGTCCTCTGGTTGACTCATCAGCTCAGGTCACTGCCTCGTCAGTACGTTTGTATGGTGAGCTaGTTAGAGGTTTTACTGGTG | + |
Preference number: 5 (lower is better) Translates to: DSGVLWLTHQLRSLPRQYVCMVS*LEVLLV Trigger: CACCAGTAAAACCTCTAACAAGCTCACCATACAAAC...GTACTGACGAGGCAGTGACCTGAGCTGATGAGTCAACCAGAGGACACCAGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS-3UTR CAA 90 bp | AAGTCTAGTATCCAGGAAGTTCACTGTGTCTGTTCCATGGACAAACAGATGGACGACACTGAGGTTGGCTaGCTCGGTGATCACCTCTGC | + |
Preference number: 5 (lower is better) Translates to: KSSIQEVHCVCSMDKQMDDTEVG*LGDHLC Trigger: GCAGAGGTGATCACCGAGCAAGCCAACCTCAGTGTC...GTCCATCTGTTTGTCCATGGAACAGACACAGTGAACTTCCTGGATACTAGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS TCA 90 bp | GATATCTCCAGAAGCCCCAGGCTGACGACAGTCCCTAAGGTCTCCTaGTGCAGGGACTCGATGAGATTTAAATGTGACATGCAGAAGAAT | + |
Preference number: 5 (lower is better) Translates to: DISRSPRLTTVPKVS*CRDSMRFKCDMQKN Trigger: ATTCTTCTGCATGTCACATTTAAATCTCATCGAGTCCCTGCATCAGGAGACCTTAGGGACTGTCGTCAGCCTGGGGCTTCTGGAGATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS GCA 90 bp | TCGATGAGATTTAAATGTGACATGCAGAAGAATCTTTGCGACAACTaGTGTGACTGTGAGGATGAGGAGGGTCGCCAGGCCGTACACAGT | + |
Preference number: 5 (lower is better) Translates to: SMRFKCDMQKNLCDN*CDCEDEEGRQAVHS Trigger: ACTGTGTACGGCCTGGCGACCCTCCTCATCCTCACAGTCACAGCAGTTGTCGCAAAGATTCTTCTGCATGTCACATTTAAATCTCATCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS TCA 90 bp | GGTTCCTCCTTGGTGGCTTGGTACAACACAGCAAATCCCTGGGCCTaGTTGATGCGATCAGAGAAGAAATACAAAATGACAAAATCCAGA | + |
Preference number: 5 (lower is better) Translates to: GSSLVAWYNTANPWA*LMRSEKKYKMTKSR Trigger: TCTGGATTTTGTCATTTTGTATTTCTTCTCTGATCGCATCAATCAGGCCCAGGGATTTGCTGTGTTGTACCAAGCCACCAAGGAGGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 72 bp | CTGTGGCTGTTGGCCCCAACTGACGGTGCCCAGGAATaGCTACCTGGGGCAGTCTGCGGAGGGTGGCTGGGG | + |
Preference number: 6 (lower is better) Translates to: LWLLAPTDGAQE*LPGAVCGGWLG Trigger: CCCCAGCCACCCTCCGCAGACTGCCCCAGGTAGCCATTCCTGGGCACCGTCAGTTGGGGCCAACAGCCACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CAA 72 bp | CCGCAGGGCTGCGTGTGGTCCCCGAAGCAGACACTATaGCACTCGGTGCTGGCCGCCTCCCCGTGCTTCCAG | + |
Preference number: 6 (lower is better) Translates to: PQGCVWSPKQTL*HSVLAASPCFQ Trigger: CTGGAAGCACGGGGAGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020662.15 ENSMUST00000151978.2 |
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CDS GCA 72 bp | CGCAGGGCTGCGTGTGGTCCCCGAAGCAGACACTATTaGACTCGGTGCTGGCCGCCTCCCCGTGCTTCCAGT | + |
Preference number: 6 (lower is better) Translates to: RRAACGPRSRHY*TRCWPPPRASS Trigger: ACTGGAAGCACGGGGAGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020662.15 ENSMUST00000151978.2 |
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CDS TCA 72 bp | AGGGAAGTCAGGGGAGTACACCACGGCTGCCATGGCTaGGTAGTTCCCACCGCAGGCGCCCACGAGAGTGTC | + |
Preference number: 6 (lower is better) Translates to: REVRGVHHGCHG*VVPTAGAHESV Trigger: GACACTCTCGTGGGCGCCTGCGGTGGGAACTACTCAGCCATGGCAGCCGTGGTGTACTCCCCTGACTTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 72 bp | TGTCAGGGAAGTCAGGGGAGTACACCACGGCTGCCATaGCTGAGTAGTTCCCACCGCAGGCGCCCACGAGAG | + |
Preference number: 6 (lower is better) Translates to: CQGSQGSTPRLP*LSSSHRRRPRE Trigger: CTCTCGTGGGCGCCTGCGGTGGGAACTACTCAGCCATGGCAGCCGTGGTGTACTCCCCTGACTTCCCTGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CAA 90 bp | AGGGTCGCCAGGCCGTACACAGTCCATCCTTCCACTCTGTGGCTGTaGGCCCCAACTGACGGTGCCCAGGAATGGCTACCTGGGGCAGTC | + |
Preference number: 6 (lower is better) Translates to: RVARPYTVHPSTLWL*APTDGAQEWLPGAV Trigger: GACTGCCCCAGGTAGCCATTCCTGGGCACCGTCAGTTGGGGCCAACAGCCACAGAGTGGAAGGATGGACTGTGTACGGCCTGGCGACCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS GCA 72 bp | GCGTGTGGTCCCCGAAGCAGACACTATTGCACTCGGTaGTGGCCGCCTCCCCGTGCTTCCAGTAGTCAGGAT | + |
Preference number: 6 (lower is better) Translates to: ACGPRSRHYCTR*WPPPRASSSQD Trigger: ATCCTGACTACTGGAAGCACGGGGAGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020662.15 ENSMUST00000151978.2 |
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CDS CCA 72 bp | GTCGCCAGGCCGTACACAGTCCATCCTTCCACTCTGTaGCTGTTGGCCCCAACTGACGGTGCCCAGGAATGG | + |
Preference number: 6 (lower is better) Translates to: VARPYTVHPSTL*LLAPTDGAQEW Trigger: CCATTCCTGGGCACCGTCAGTTGGGGCCAACAGCCACAGAGTGGAAGGATGGACTGTGTACGGCCTGGCGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS GCA 72 bp | AGGCTCCTGGAACCCGGATGGTCCAGTAGCAGACTCTaGCAGTGGCGTAGGTGTCAGGGAAGTCAGGGGAGT | + |
Preference number: 6 (lower is better) Translates to: RLLEPGWSSSRL*QWRRCQGSQGS Trigger: ACTCCCCTGACTTCCCTGACACCTACGCCACTGGCAGAGTCTGCTACTGGACCATCCGGGTTCCAGGAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 72 bp | AGGTTGGCTTGCTCGGTGATCACCTCTGCCAGGGTCTaGTTGACAGCAGGTCTCTCCTGTGGCGGTTCCTCC | + |
Preference number: 6 (lower is better) Translates to: RLACSVITSARV*LTAGLSCGGSS Trigger: GGAGGAACCGCCACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAGAGGTGATCACCGAGCAAGCCAACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CAA 90 bp | ACACTGAGGTTGGCTTGCTCGGTGATCACCTCTGCCAGGGTCTGGTaGACAGCAGGTCTCTCCTGTGGCGGTTCCTCCTTGGTGGCTTGG | + |
Preference number: 6 (lower is better) Translates to: TLRLACSVITSARVW*TAGLSCGGSSLVAW Trigger: CCAAGCCACCAAGGAGGAACCGCCACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAGAGGTGATCACCGAGCAAGCCAACCTCAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS GCA 72 bp | TCAAAGAGGATAATCCTGCCGTCCCCACCGCAGGGCTaGGTGTGGTCCCCGAAGCAGACACTATTGCACTCG | + |
Preference number: 6 (lower is better) Translates to: SKRIILPSPPQG*VWSPKQTLLHS Trigger: CGAGTGCAATAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCGGTGGGGACGGCAGGATTATCCTCTTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020662.15 ENSMUST00000151978.2 |
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CDS GCA 72 bp | GCTGACACTGAGGTTGGCTTGCTCGGTGATCACCTCTaGCAGGGTCTGGTTGACAGCAGGTCTCTCCTGTGG | + |
Preference number: 6 (lower is better) Translates to: ADTEVGLLGDHL*QGLVDSRSLLW Trigger: CCACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAGAGGTGATCACCGAGCAAGCCAACCTCAGTGTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 72 bp | TGTGGTCCCCGAAGCAGACACTATTGCACTCGGTGCTaGCCGCCTCCCCGTGCTTCCAGTAGTCAGGATTGT | + |
Preference number: 6 (lower is better) Translates to: CGPRSRHYCTRC*PPPRASSSQDC Trigger: ACAATCCTGACTACTGGAAGCACGGGGAGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020662.15 ENSMUST00000151978.2 |
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CDS CCA 72 bp | CTCTGCCAGGGTCTGGTTGACAGCAGGTCTCTCCTGTaGCGGTTCCTCCTTGGTGGCTTGGTACAACACAGC | + |
Preference number: 6 (lower is better) Translates to: LCQGLVDSRSLL*RFLLGGLVQHS Trigger: GCTGTGTTGTACCAAGCCACCAAGGAGGAACCGCCACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CAA 72 bp | TTGGCTTGCTCGGTGATCACCTCTGCCAGGGTCTGGTaGACAGCAGGTCTCTCCTGTGGCGGTTCCTCCTTG | + |
Preference number: 6 (lower is better) Translates to: LACSVITSARVW*TAGLSCGGSSL Trigger: CAAGGAGGAACCGCCACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAGAGGTGATCACCGAGCAAGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CAA 72 bp | AGGCCGTACACAGTCCATCCTTCCACTCTGTGGCTGTaGGCCCCAACTGACGGTGCCCAGGAATGGCTACCT | + |
Preference number: 6 (lower is better) Translates to: RPYTVHPSTLWL*APTDGAQEWLP Trigger: AGGTAGCCATTCCTGGGCACCGTCAGTTGGGGCCAACAGCCACAGAGTGGAAGGATGGACTGTGTACGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CAA 90 bp | CGGATGCTGGAAAGTCTCGTTCCAGAACAGACATGGCTTCCCACCTaGCAGCGCTGTCCAGCTCTGTGTTCCCCTGTAATCTGCACCGTT | + |
Preference number: 6 (lower is better) Translates to: RMLESLVPEQTWLPT*QRCPALCSPVICTV Trigger: AACGGTGCAGATTACAGGGGAACACAGAGCTGGACAGCGCTGCAAGGTGGGAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CAA 90 bp | TTGTGCTCGCCCAGTCCTCCTTCCCCGTTGGGGTACTTCAGCGTGTaGTACGGATGCTGGAAAGTCTCGTTCCAGAACAGACATGGCTTC | + |
Preference number: 6 (lower is better) Translates to: LCSPSPPSPLGYFSV*YGCWKVSFQNRHGF Trigger: GAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGAAGGAGGACTGGGCGAGCACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS GCA 72 bp | CGTAGCACCAAGGGCTCACGTCTCCATCTGGATTTCTaGAATAATTGTGCTCGCCCAGTCCTCCTTCCCCGT | + |
Preference number: 6 (lower is better) Translates to: RSTKGSRLHLDF*NNCARPVLLPR Trigger: ACGGGGAAGGAGGACTGGGCGAGCACAATTATTGCAGAAATCCAGATGGAGACGTGAGCCCTTGGTGCTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS GCA 72 bp | GCGGTGGGTGTAGCCGTCCAGCAGCTCCACCATGTCTaGAGAGTCCCTGATATCAAACAGGGTGAAGTTGAA | + |
Preference number: 6 (lower is better) Translates to: AVGVAVQQLHHV*RVPDIKQGEVE Trigger: TTCAACTTCACCCTGTTTGATATCAGGGACTCTGCAGACATGGTGGAGCTGCTGGACGGCTACACCCACCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 72 bp | GTACGGATGCTGGAAAGTCTCGTTCCAGAACAGACATaGCTTCCCACCTTGCAGCGCTGTCCAGCTCTGTGT | + |
Preference number: 6 (lower is better) Translates to: VRMLESLVPEQT*LPTLQRCPALC Trigger: ACACAGAGCTGGACAGCGCTGCAAGGTGGGAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CAA 72 bp | CCCAGTCCTCCTTCCCCGTTGGGGTACTTCAGCGTGTaGTACGGATGCTGGAAAGTCTCGTTCCAGAACAGA | + |
Preference number: 6 (lower is better) Translates to: PSPPSPLGYFSV*YGCWKVSFQNR Trigger: TCTGTTCTGGAACGAGACTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGAAGGAGGACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS GCA 72 bp | CCTTCCCCGTTGGGGTACTTCAGCGTGTTGTACGGATaGTGGAAAGTCTCGTTCCAGAACAGACATGGCTTC | + |
Preference number: 6 (lower is better) Translates to: PSPLGYFSVLYG*WKVSFQNRHGF Trigger: GAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 72 bp | TCCCCGTTGGGGTACTTCAGCGTGTTGTACGGATGCTaGAAAGTCTCGTTCCAGAACAGACATGGCTTCCCA | + |
Preference number: 6 (lower is better) Translates to: SPLGYFSVLYGC*KVSFQNRHGFP Trigger: TGGGAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 72 bp | TGCAATAATTGTGCTCGCCCAGTCCTCCTTCCCCGTTaGGGTACTTCAGCGTGTTGTACGGATGCTGGAAAG | + |
Preference number: 6 (lower is better) Translates to: CNNCARPVLLPR*GTSACCTDAGK Trigger: CTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGAAGGAGGACTGGGCGAGCACAATTATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 72 bp | AAACAGGGTGAAGTTGAAATGGATGCGAGAGGCTCCTaGAACCCGGATGGTCCAGTAGCAGACTCTGCCAGT | + |
Preference number: 6 (lower is better) Translates to: KQGEVEMDARGS*NPDGPVADSAS Trigger: ACTGGCAGAGTCTGCTACTGGACCATCCGGGTTCCAGGAGCCTCTCGCATCCATTTCAACTTCACCCTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 72 bp | GCAGAGTCCCTGATATCAAACAGGGTGAAGTTGAAATaGATGCGAGAGGCTCCTGGAACCCGGATGGTCCAG | + |
Preference number: 6 (lower is better) Translates to: AESLISNRVKLK*MREAPGTRMVQ Trigger: CTGGACCATCCGGGTTCCAGGAGCCTCTCGCATCCATTTCAACTTCACCCTGTTTGATATCAGGGACTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CAA 90 bp | ATGCGATCAGAGAAGAAATACAAAATGACAAAATCCAGAGAGACATaGAAAGACAGAGGCGGGCGGCTCCTCCCACTGAGCCGGACCAGG | + |
Preference number: 6 (lower is better) Translates to: MRSEKKYKMTKSRET*KDRGGRLLPLSRTR Trigger: CCTGGTCCGGCTCAGTGGGAGGAGCCGCCCGCCTCTGTCTTTCAATGTCTCTCTGGATTTTGTCATTTTGTATTTCTTCTCTGATCGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS TCA 72 bp | GTAGTCAGGATTGTTCCCACAGAAGCAGGCATAGCCTaGCTCCATCCCAGCAAACTTGAATCTCTGACTCCG | + |
Preference number: 6 (lower is better) Translates to: VVRIVPTEAGIA*LHPSKLESLTP Trigger: CGGAGTCAGAGATTCAAGTTTGCTGGGATGGAGTCAGGCTATGCCTGCTTCTGTGGGAACAATCCTGACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020662.15 ENSMUST00000151978.2 |
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CDS TCA 72 bp | AGAAGCCCCAGGCTGACGACAGTCCCTAAGGTCTCCTaGTGCAGGGACTCGATGAGATTTAAATGTGACATG | + |
Preference number: 6 (lower is better) Translates to: RSPRLTTVPKVS*CRDSMRFKCDM Trigger: CATGTCACATTTAAATCTCATCGAGTCCCTGCATCAGGAGACCTTAGGGACTGTCGTCAGCCTGGGGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |
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CDS CCA 72 bp | CTTGTTAGAGGTTTTACTGGTGCCCGTGAGAGGAGGTaGGTTTCCATGATCCTTGTAGCAGCCAAGGTTTCC | + |
Preference number: 6 (lower is better) Translates to: LVRGFTGARERR*VSMILVAAKVS Trigger: GGAAACCTTGGCTGCTACAAGGATCATGGAAACCCACCTCCTCTCACGGGCACCAGTAAAACCTCTAACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020662.15 ENSMUST00000151978.2 |
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CDS CAA 90 bp | CCCAGCAAACTTGAATCTCTGACTCCGACAGAAGCTGATACAGGTTaGTATGGTGAGCTTGTTAGAGGTTTTACTGGTGCCCGTGAGAGG | + |
Preference number: 6 (lower is better) Translates to: PSKLESLTPTEADTG*YGELVRGFTGARER Trigger: CCTCTCACGGGCACCAGTAAAACCTCTAACAAGCTCACCATACAAACCTGTATCAGCTTCTGTCGGAGTCAGAGATTCAAGTTTGCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020662.15 ENSMUST00000151978.2 |
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CDS CAA 72 bp | CTTGAATCTCTGACTCCGACAGAAGCTGATACAGGTTaGTATGGTGAGCTTGTTAGAGGTTTTACTGGTGCC | + |
Preference number: 6 (lower is better) Translates to: LESLTPTEADTG*YGELVRGFTGA Trigger: GGCACCAGTAAAACCTCTAACAAGCTCACCATACAAACCTGTATCAGCTTCTGTCGGAGTCAGAGATTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020662.15 ENSMUST00000151978.2 |
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CDS TCA 72 bp | TTGGTGGCTTGGTACAACACAGCAAATCCCTGGGCCTaGTTGATGCGATCAGAGAAGAAATACAAAATGACA | + |
Preference number: 6 (lower is better) Translates to: LVAWYNTANPWA*LMRSEKKYKMT Trigger: TGTCATTTTGTATTTCTTCTCTGATCGCATCAATCAGGCCCAGGGATTTGCTGTGTTGTACCAAGCCACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020662.15 |