RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KREMEN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020393

Ensembl transcript IDs: ENSMUST00000020662.15, ENSMUST00000151978.2

Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGGCCAGTGTGCTCAGCTCCAGCTTGGCAAGACAGGAGCCCGTGTaGGGCCCCCAGGTTCTGTTGGCAGACCAGGGTGGGGGTGCAGCC +
Preference number: 1 (lower is better)
Translates to: WASVLSSSLARQEPV*GPQVLLADQGGGAA
Trigger: GGCTGCACCCCCACCCTGGTCTGCCAACAGAACCTGGGGGCCTCACACGGGCTCCTGTCTTGCCAAGCTGGAGCTGAGCACACTGGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 90 bp GGCCCTGCAGTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTaGGCACATCCACCGCCCTTCCTGGGGACACCAATGCTGAGCCGC +
Preference number: 1 (lower is better)
Translates to: GPAVLGCARPTAKGA*AHPPPFLGTPMLSR
Trigger: GCGGCTCAGCATTGGTGTCCCCAGGAAGGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACACTGCAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 90 bp GATGACAGTGAGCCGTGGGGTGGCACCTGGCCCAGGCACATCCCATaGGCTGGCCCACAGGCCAGGACAGCTGTACCCGCCAGAGCTTTG +
Preference number: 1 (lower is better)
Translates to: DDSEPWGGTWPRHIP*AGPQARTAVPARAL
Trigger: CAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTGTGGGCCAGCCCATGGGATGTGCCTGGGCCAGGTGCCACCCCACGGCTCACTGTCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 90 bp ATGAGGAGCATCAGGTGGGGTCCCTCCTGGGATGACAGTGAGCCGTaGGGTGGCACCTGGCCCAGGCACATCCCATGGGCTGGCCCACAG +
Preference number: 1 (lower is better)
Translates to: MRSIRWGPSWDDSEP*GGTWPRHIPWAGPQ
Trigger: CTGTGGGCCAGCCCATGGGATGTGCCTGGGCCAGGTGCCACCCCACGGCTCACTGTCATCCCAGGAGGGACCCCACCTGATGCTCCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR GCA 90 bp TCCCCTTCCACTTGTTTGCTCTGCCCCACTCAGCCTGGGCCAGTGTaGTCAGCTCCAGCTTGGCAAGACAGGAGCCCGTGTGAGGCCCCC +
Preference number: 1 (lower is better)
Translates to: SPSTCLLCPTQPGPV*SAPAWQDRSPCEAP
Trigger: GGGGGCCTCACACGGGCTCCTGTCTTGCCAAGCTGGAGCTGAGCACACTGGCCCAGGCTGAGTGGGGCAGAGCAAACAAGTGGAAGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 90 bp TTGCTCTGCCCCACTCAGCCTGGGCCAGTGTGCTCAGCTCCAGCTTaGCAAGACAGGAGCCCGTGTGAGGCCCCCAGGTTCTGTTGGCAG +
Preference number: 1 (lower is better)
Translates to: LLCPTQPGPVCSAPA*QDRSPCEAPRFCWQ
Trigger: CTGCCAACAGAACCTGGGGGCCTCACACGGGCTCCTGTCTTGCCAAGCTGGAGCTGAGCACACTGGCCCAGGCTGAGTGGGGCAGAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 90 bp AGGAGCAGTGAGGTGAGTTACGGAGCTGGCCACGGCCAGGGGCTCTaGAGATGGAATGCCAACTTGCTCGGCCCGGGAATGCACACGGGC +
Preference number: 1 (lower is better)
Translates to: RSSEVSYGAGHGQGL*RWNANLLGPGMHTG
Trigger: GCCCGTGTGCATTCCCGGGCCGAGCAAGTTGGCATTCCATCTTCAGAGCCCCTGGCCGTGGCCAGCTCCGTAACTCACCTCACTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR CCA 90 bp CGAGCTCTGATAGTGTCAGGCCAGCGGATGATGAGGAGCATCAGGTaGGGTCCCTCCTGGGATGACAGTGAGCCGTGGGGTGGCACCTGG +
Preference number: 1 (lower is better)
Translates to: RALIVSGQRMMRSIR*GPSWDDSEPWGGTW
Trigger: CCAGGTGCCACCCCACGGCTCACTGTCATCCCAGGAGGGACCCCACCTGATGCTCCTCATCATCCGCTGGCCTGACACTATCAGAGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 90 bp CATGGTGTTCCAGGAGGGTACCCAGGAGAGCAGAGGCTCAAGGGCTaGCAGGAGAGTGACCAAGGTCTACCTTCAGGGCACAGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: HGVPGGYPGEQRLKG*QESDQGLPSGHSCC
Trigger: GCAGCAGCTGTGCCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGCCCTTGAGCCTCTGCTCTCCTGGGTACCCTCCTGGAACACCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 90 bp CACTCCACAGGAGAGGAGCCAGGGAACCATGGAGGCTTGTGGACTTaGCTCGGGAGACTTGTGTGGCCCCTGCAGAGGCTGACAGAGTCT +
Preference number: 1 (lower is better)
Translates to: HSTGEEPGNHGGLWT*LGRLVWPLQRLTES
Trigger: AGACTCTGTCAGCCTCTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 90 bp ACAGGACACTCCACAGGAGAGGAGCCAGGGAACCATGGAGGCTTGTaGACTTGGCTCGGGAGACTTGTGTGGCCCCTGCAGAGGCTGACA +
Preference number: 1 (lower is better)
Translates to: TGHSTGEEPGNHGGL*TWLGRLVWPLQRLT
Trigger: TGTCAGCCTCTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGAGTGTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR GCA 90 bp CTTCGGCCACCTCCCTCTAAGGTGAGAGATCCCCTTCCACTTGTTTaGTCTGCCCCACTCAGCCTGGGCCAGTGTGCTCAGCTCCAGCTT +
Preference number: 1 (lower is better)
Translates to: LRPPPSKVRDPLPLV*SAPLSLGQCAQLQL
Trigger: AAGCTGGAGCTGAGCACACTGGCCCAGGCTGAGTGGGGCAGAGCAAACAAGTGGAAGGGGATCTCTCACCTTAGAGGGAGGTGGCCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 90 bp CCAGGGAACCATGGAGGCTTGTGGACTTGGCTCGGGAGACTTGTGTaGCCCCTGCAGAGGCTGACAGAGTCTGGAGGCCATCCACTTCTA +
Preference number: 1 (lower is better)
Translates to: PGNHGGLWTWLGRLV*PLQRLTESGGHPLL
Trigger: TAGAAGTGGATGGCCTCCAGACTCTGTCAGCCTCTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 90 bp AGCCAAGGCACCCTGCTGGACAAGGGCTGCCTAGAGAAGTGTTTCTaGGCTTCTGTGTACAGGCTCTCAGAGGCAGCGGGAGCAGTGGTC +
Preference number: 1 (lower is better)
Translates to: SQGTLLDKGCLEKCF*ASVYRLSEAAGAVV
Trigger: GACCACTGCTCCCGCTGCCTCTGAGAGCCTGTACACAGAAGCTCAGAAACACTTCTCTAGGCAGCCCTTGTCCAGCAGGGTGCCTTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR CCA 90 bp CAGACATCAAACAGGACACTCCACAGGAGAGGAGCCAGGGAACCATaGAGGCTTGTGGACTTGGCTCGGGAGACTTGTGTGGCCCCTGCA +
Preference number: 1 (lower is better)
Translates to: QTSNRTLHRRGAREP*RLVDLARETCVAPA
Trigger: TGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 90 bp GTTTCTGAGCTTCTGTGTACAGGCTCTCAGAGGCAGCGGGAGCAGTaGTCCAAACAGGCTGGAGACAGACACCACAGGCGGTCGGTCAAG +
Preference number: 1 (lower is better)
Translates to: VSELLCTGSQRQREQ*SKQAGDRHHRRSVK
Trigger: CTTGACCGACCGCCTGTGGTGTCTGTCTCCAGCCTGTTTGGACCACTGCTCCCGCTGCCTCTGAGAGCCTGTACACAGAAGCTCAGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR TCA 90 bp TGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGCACAGCTGCTGCTaGCAAAGGCCACTTCCAGACTGCAGGACTTCTCAGTCGGGGATG +
Preference number: 1 (lower is better)
Translates to: WQESDQGLPSGHSCC*QRPLPDCRTSQSGM
Trigger: CATCCCCGACTGAGAAGTCCTGCAGTCTGGAAGTGGCCTTTGTCAGCAGCAGCTGTGCCCTGAAGGTAGACCTTGGTCACTCTCCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 90 bp GCTGACAAAGGCCACTTCCAGACTGCAGGACTTCTCAGTCGGGGATaGCCCTTCCTCTCCCAACTGCAGCTGGGTCTCTCAATCTTGCAG +
Preference number: 1 (lower is better)
Translates to: ADKGHFQTAGLLSRG*PFLSQLQLGLSILQ
Trigger: CTGCAAGATTGAGAGACCCAGCTGCAGTTGGGAGAGGAAGGGCCATCCCCGACTGAGAAGTCCTGCAGTCTGGAAGTGGCCTTTGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 90 bp GTCCCTCTCCCCACTAAGCCACCTCCTCAGTCCTACACCAACTTTTaGAAGGAAGGCTCAGGAGGCCATCAGCAAGCAGAGTCCCGGTTC +
Preference number: 1 (lower is better)
Translates to: VPLPTKPPPQSYTNF*KEGSGGHQQAESRF
Trigger: GAACCGGGACTCTGCTTGCTGATGGCCTCCTGAGCCTTCCTTTCAAAAGTTGGTGTAGGACTGAGGAGGTGGCTTAGTGGGGAGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR GCA 90 bp AGGCTAGACTGGCTAGTCAGTGAATCCCAGGGATTCACCCATCGCTaGCTCCCTAGTGCTGTGATGACAAGCAGTTGTCCCTCTCCCCAC +
Preference number: 1 (lower is better)
Translates to: RLDWLVSESQGFTHR*LPSAVMTSSCPSPH
Trigger: GTGGGGAGAGGGACAACTGCTTGTCATCACAGCACTAGGGAGGCAGCGATGGGTGAATCCCTGGGATTCACTGACTAGCCAGTCTAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR CCA 90 bp GGGCTGCCTCTAAAGCAGGGTGCTCCCAAAAGAGATGGTGGTGAATaGGAAGGCAGGGAACTCATCAGAGGAGAACTCAGGGGAGCAAAC +
Preference number: 1 (lower is better)
Translates to: GLPLKQGAPKRDGGE*EGRELIRGELRGAN
Trigger: GTTTGCTCCCCTGAGTTCTCCTCTGATGAGTTCCCTGCCTTCCCATTCACCACCATCTCTTTTGGGAGCACCCTGCTTTAGAGGCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 90 bp TCCTCTCCCAACTGCAGCTGGGTCTCTCAATCTTGCAGCTTTTCCTaGGAGGATCTCCAGTTCCCAAGCCTGACCTTTTCCTGCCTCCCT +
Preference number: 1 (lower is better)
Translates to: SSPNCSWVSQSCSFS*EDLQFPSLTFSCLP
Trigger: AGGGAGGCAGGAAAAGGTCAGGCTTGGGAACTGGAGATCCTCCCAGGAAAAGCTGCAAGATTGAGAGACCCAGCTGCAGTTGGGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 90 bp GTGACTGGCTGCCTACAGGTTCTAACAGACTGTGCCTGTCATTTCTaGAGGTCTGGCCTGGGTGATTTACAGCCCTTCCTTCCCACTGTC +
Preference number: 1 (lower is better)
Translates to: VTGCLQVLTDCACHF*RSGLGDLQPFLPTV
Trigger: GACAGTGGGAAGGAAGGGCTGTAAATCACCCAGGCCAGACCTCCAGAAATGACAGGCACAGTCTGTTAGAACCTGTAGGCAGCCAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 90 bp CTATGCTCCAGGCAGGGTGTTACCAGCACAAAGGCCCTCTGTGACTaGCTGCCTACAGGTTCTAACAGACTGTGCCTGTCATTTCTGGAG +
Preference number: 1 (lower is better)
Translates to: LCSRQGVTSTKALCD*LPTGSNRLCLSFLE
Trigger: CTCCAGAAATGACAGGCACAGTCTGTTAGAACCTGTAGGCAGCCAGTCACAGAGGGCCTTTGTGCTGGTAACACCCTGCCTGGAGCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 90 bp GGTTCTAACAGACTGTGCCTGTCATTTCTGGAGGTCTGGCCTGGGTaGTTTACAGCCCTTCCTTCCCACTGTCCTCTGCTGTTGTTGGAG +
Preference number: 1 (lower is better)
Translates to: GSNRLCLSFLEVWPG*FTALPSHCPLLLLE
Trigger: CTCCAACAACAGCAGAGGACAGTGGGAAGGAAGGGCTGTAAATCACCCAGGCCAGACCTCCAGAAATGACAGGCACAGTCTGTTAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 90 bp AAAGGAAGGCTCAGGAGGCCATCAGCAAGCAGAGTCCCGGTTCCCTaGGGGAAGCCAATGTGTGAAGCCACGAGAGTGAAGTTTAAGTGT +
Preference number: 1 (lower is better)
Translates to: KGRLRRPSASRVPVP*GKPMCEATRVKFKC
Trigger: ACACTTAAACTTCACTCTCGTGGCTTCACACATTGGCTTCCCTCAGGGAACCGGGACTCTGCTTGCTGATGGCCTCCTGAGCCTTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR GCA 90 bp AGGTCTGGCCTGGGTGATTTACAGCCCTTCCTTCCCACTGTCCTCTaGTGTTGTTGGAGGTGGGTTAGTTTTCCTTATGTGTCCCTACCC +
Preference number: 1 (lower is better)
Translates to: RSGLGDLQPFLPTVL*CCWRWVSFPYVSLP
Trigger: GGGTAGGGACACATAAGGAAAACTAACCCACCTCCAACAACAGCAGAGGACAGTGGGAAGGAAGGGCTGTAAATCACCCAGGCCAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR GCA 90 bp TTGCTGATGTGGGAGAGGATGAAGACCTCTTTCCTACTCTGTCTCTaGTTTGTAAGCAGTGTGACAGGAAGGGAGGGACATAGGGCACCT +
Preference number: 1 (lower is better)
Translates to: LLMWERMKTSFLLCL*FVSSVTGREGHRAP
Trigger: AGGTGCCCTATGTCCCTCCCTTCCTGTCACACTGCTTACAAAGCAGAGACAGAGTAGGAAAGAGGTCTTCATCCTCTCCCACATCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR GCA 90 bp GTCCCTTCTATGCCTCCTGATCTATCACCATGTGAACAGTCTCTCTaGCACCATGAACTGAATTGTTCTGCCATCCTTCCTTGTCATGAC +
Preference number: 1 (lower is better)
Translates to: VPSMPPDLSPCEQSL*HHELNCSAILPCHD
Trigger: GTCATGACAAGGAAGGATGGCAGAACAATTCAGTTCATGGTGGCAGAGAGACTGTTCACATGGTGATAGATCAGGAGGCATAGAAGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR GCA 90 bp TTGAAGGTTATATATTGCACGAATCCCTGGCTACAGTCCCTTCTATaGCTCCTGATCTATCACCATGTGAACAGTCTCTCTGCCACCATG +
Preference number: 1 (lower is better)
Translates to: LKVIYCTNPWLQSLL*LLIYHHVNSLSATM
Trigger: CATGGTGGCAGAGAGACTGTTCACATGGTGATAGATCAGGAGGCATAGAAGGGACTGTAGCCAGGGATTCGTGCAATATATAACCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR CCA 90 bp CCGGCGCGAGCTCTGATAGTGTCAGGCCAGCGGATGATGAGGAGCATCAGGTGGGATGACAGTGAGCCGTaGGGTGGCACCTGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: PARALIVSGQRMMRSIRWDDSEP*GGTWPR
Trigger: CCTGGGCCAGGTGCCACCCCACGGCTCACTGTCATC...CCACCTGATGCTCCTCATCATCCGCTGGCCTGACACTATCAGAGCTCGCGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR TCA 90 bp GTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTGGGCACATCCACCGCCCTCCAGTTCCCAAGCCTaGCCTTTTCCTGCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: VLGCARPTAKGAWAHPPPSSSQA*PFPASL
Trigger: CAGGGAGGCAGGAAAAGGTCAGGCTTGGGAACTGGA...GGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CAA 90 bp ACACTCCACAGGAGAGGAGCCAGGGAACCATGGAGGCTTGTGGACTaGGCTCGGGAGACTTGTGTGGCCCCTGCAGAGGCTGACAGAGTC +
Preference number: 2 (lower is better)
Translates to: TLHRRGAREPWRLVD*ARETCVAPAEADRV
Trigger: GACTCTGTCAGCCTCTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CAA 90 bp CAAACAGGACACTCCACAGGAGAGGAGCCAGGGAACCATGGAGGCTaGTGGACTTGGCTCGGGAGACTTGTGTGGCCCCTGCAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: QTGHSTGEEPGNHGG*WTWLGRLVWPLQRL
Trigger: CAGCCTCTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGAGTGTCCTGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CCA 90 bp TCGGCTTACCCCTATGCTCCAGGCAGGGTGTTACCAGCACAAAGGCCCTCTGTGTCCCTGATCCCCAGATaGCCCCAGACAGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: SAYPYAPGRVLPAQRPSVSLIPR*PQTVLG
Trigger: CCCCAGGACTGTCTGGGGCCATCTGGGGATCAGGGA...CACAGAGGGCCTTTGTGCTGGTAACACCCTGCCTGGAGCATAGGGGTAAGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CAA 90 bp CCATGGGCTGGCCCACAGGCCAGGACAGCTGTACCCGCCAGAGCTTaGATCTTCAAGAGCTTTTGGCTGAGGAGTCTGAAGCCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: PWAGPQARTAVPARA*IFKSFWLRSLKPEP
Trigger: GGGCTCTGGCTTCAGACTCCTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTGTGGGCCAGCCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR TCA 90 bp GTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTGGGCACATCCACCGCCCCAAAAGAGATGGTGGTaGATGGGAAGGCAGGGAACT +
Preference number: 2 (lower is better)
Translates to: VLGCARPTAKGAWAHPPPQKRWW*MGRQGT
Trigger: AGTTCCCTGCCTTCCCATTCACCACCATCTCTTTTG...GGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CCA 90 bp GGAGAGCAGAGGCTCAAGGGCTGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGTGTGTCCTGTCAGCCTaGGCCTGTCTTACCATCCCC +
Preference number: 2 (lower is better)
Translates to: GEQRLKGWQESDQGLPSGCVLSA*ACLTIP
Trigger: GGGGATGGTAAGACAGGCCCAGGCTGACAGGACACA...CCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGCCCTTGAGCCTCTGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR TCA 90 bp GGAAGGTCTTGCTGCTATGAAGGTGGCGGGGATGGCAGCTCCCTCGCTGGATCTCAAGCTCTTGATCGCTaGGTTACAGCCCCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: GRSCCYEGGGDGSSLAGSQALDR*VTAPAL
Trigger: CAGAGCTGGGGCTGTAACTCAGCGATCAAGAGCTTG...AGATCCAGCGAGGGAGCTGCCATCCCCGCCACCTTCATAGCAGCAAGACCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR GCA 90 bp GCTGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGCACAGCTGCTGCTGACAAAACAGCCCCAGCTCTGTaGTACAGCCCCAGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: AGRRVTKVYLQGTAAADKTAPAL*YSPSSR
Trigger: CCTAGAGCTGGGGCTGTAGCACAGAGCTGGGGCTGT...TTTGTCAGCAGCAGCTGTGCCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR TCA 90 bp GGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGAGGCTACAGGCTTGGGCTaGGGACAGGAAGACAGGCTG +
Preference number: 2 (lower is better)
Translates to: GQDSCTRQSFDLQELLAEATGLG*GQEDRL
Trigger: CAGCCTGTCTTCCTGTCCTCAGCCCAAGCCTGTAGC...CTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR TCA 90 bp GGCGCGAGCTCTGATAGTGTCAGGCCAGCGGATGATGAGGAGCATCAGGTGGGGTACCCGCCAGAGCTTTaGTCTTCAAGAGCTTTTGGC +
Preference number: 2 (lower is better)
Translates to: GASSDSVRPADDEEHQVGYPPEL*SSRAFG
Trigger: GCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTA...CCCCACCTGATGCTCCTCATCATCCGCTGGCCTGACACTATCAGAGCTCGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CCA 90 bp GGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGAGTGGAGGATCCCAGGCTaGGCTGCCTCTAAAGCAGGG +
Preference number: 2 (lower is better)
Translates to: GQDSCTRQSFDLQELLAEWRIPG*AASKAG
Trigger: CCCTGCTTTAGAGGCAGCCCAGCCTGGGATCCTCCA...CTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR GCA 90 bp GAGGATCTCCAGTTCCCAAGCCTGACCTTTTCCTGCCTCCCTGTCTGGGGGACAGCCCGCATGCTATGGTaGAGTCTTTTTCTCTCCCAC +
Preference number: 2 (lower is better)
Translates to: EDLQFPSLTFSCLPVWGTARMLW*SLFLSH
Trigger: GTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGC...TGTCCCCCAGACAGGGAGGCAGGAAAAGGTCAGGCTTGGGAACTGGAGATCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CCA 90 bp GGAGAGCAGAGGCTCAAGGGCTGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGCCATGGACAAACAGATaGACCAATCCTCAGGCTTGC +
Preference number: 2 (lower is better)
Translates to: GEQRLKGWQESDQGLPSGPWTNR*TNPQAC
Trigger: GCAAGCCTGAGGATTGGTCCATCTGTTTGTCCATGG...CCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGCCCTTGAGCCTCTGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CCA 90 bp TCGGCTTACCCCTATGCTCCAGGCAGGGTGTTACCAGCACAAAGGCCCTCTGTGTCTCCCAACTGCAGCTaGGTCTCTCAATCTTGCAGC +
Preference number: 2 (lower is better)
Translates to: SAYPYAPGRVLPAQRPSVSPNCS*VSQSCS
Trigger: GCTGCAAGATTGAGAGACCCAGCTGCAGTTGGGAGA...CACAGAGGGCCTTTGTGCTGGTAACACCCTGCCTGGAGCATAGGGGTAAGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CCA 90 bp GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGATGAGGAGCATCAGGTaGGGTCCCTCCTGGGATGAC +
Preference number: 2 (lower is better)
Translates to: AVPKADLRHQTGHSTGEEMRSIR*GPSWDD
Trigger: GTCATCCCAGGAGGGACCCCACCTGATGCTCCTCAT...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR TCA 90 bp GAGGTGCAGCCAAGGCACCCTGCTGGACAAGGGCTGCCTAGAGAAGTGTTTCTGGGAGTCATGGTGGCTTaGCTGACATTCATGCGTGTT +
Preference number: 2 (lower is better)
Translates to: EVQPRHPAGQGLPREVFLGVMVA*LTFMRV
Trigger: AACACGCATGAATGTCAGTCAAGCCACCATGACTCC...CAGAAACACTTCTCTAGGCAGCCCTTGTCCAGCAGGGTGCCTTGGCTGCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR TCA 90 bp GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGAACCCTCTAGAAAGATaGCATCTGGTGTGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: AVPKADLRHQTGHSTGEENPLER*HLVWPC
Trigger: GCAGGGCCACACCAGATGTCATCTTTCTAGAGGGTT...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR TCA 90 bp AGACAGTCCTGGGGAGCAGCAGCTAGAGGAGAGGCCTCAATGGCAGTGACTGAGAGACAGGCTGAATTCTaGTTCCACAGGATTGGCAAC +
Preference number: 2 (lower is better)
Translates to: RQSWGAAARGEASMAVTERQAEF*FHRIGN
Trigger: GTTGCCAATCCTGTGGAATCAGAATTCAGCCTGTCT...CTCAGTCACTGCCATTGAGGCCTCTCCTCTAGCTGCTGCTCCCCAGGACTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR GCA 90 bp GACTCTGGTGTCCTCTGGTTGACTCATCAGCTCAGGTCACTGCCTCGTCAGTACACCAATCCTCAGGCTTaGCCCATTGGTCAGTGGGTA +
Preference number: 2 (lower is better)
Translates to: DSGVLWLTHQLRSLPRQYTNPQA*PIGQWV
Trigger: TACCCACTGACCAATGGGGCAAGCCTGAGGATTGGT...GTACTGACGAGGCAGTGACCTGAGCTGATGAGTCAACCAGAGGACACCAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CCA 90 bp GGAAGGTCTTGCTGCTATGAAGGTGGCGGGGATGGCAGCTCCCTCGCTGGATCTATGACACATGGTAGTTaGCAGCAGAGAAAGCTCCAA +
Preference number: 2 (lower is better)
Translates to: GRSCCYEGGGDGSSLAGSMTHGS*QQRKLQ
Trigger: TTGGAGCTTTCTCTGCTGCCAACTACCATGTGTCAT...AGATCCAGCGAGGGAGCTGCCATCCCCGCCACCTTCATAGCAGCAAGACCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CCA 90 bp CCGGCGCGAGCTCTGATAGTGTCAGGCCAGCGGATGATGAGGAGCATCAGGTGGACTGTGTCTGTTCCATaGACAAACAGATGGACCAAT +
Preference number: 2 (lower is better)
Translates to: PARALIVSGQRMMRSIRWTVSVP*TNRWTN
Trigger: ATTGGTCCATCTGTTTGTCCATGGAACAGACACAGT...CCACCTGATGCTCCTCATCATCCGCTGGCCTGACACTATCAGAGCTCGCGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CCA 90 bp CAGGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGTGTGCCTGTCATTTCTaGAGGTCTGGCCTGGGTGAT +
Preference number: 2 (lower is better)
Translates to: QARTAVPARALIFKSFWLCACHF*RSGLGD
Trigger: ATCACCCAGGCCAGACCTCCAGAAATGACAGGCACA...CAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CCA 90 bp GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGGAGGCTGACAGAGTCTaGAGGCCATCCACTTCTAAG +
Preference number: 2 (lower is better)
Translates to: AVPKADLRHQTGHSTGEEEADRV*RPSTSK
Trigger: CTTAGAAGTGGATGGCCTCCAGACTCTGTCAGCCTC...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CAA 90 bp AGTCTGAGTCTGCCATGTTCCCTAGAGAGGCTACGCTCTCCTCCCTaGTCCCTAGCTGATAGTGCAATTTGGGAAGGCTGTGGAACACTG +
Preference number: 2 (lower is better)
Translates to: SLSLPCSLERLRSPP*SLADSAIWEGCGTL
Trigger: CAGTGTTCCACAGCCTTCCCAAATTGCACTATCAGCTAGGGACAAGGGAGGAGAGCGTAGCCTCTCTAGGGAACATGGCAGACTCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR TCA 90 bp CTGAGTCTGCCATGTTCCCTAGAGAGGCTACGCTCTCCTCCCTTGTCCCTAGCTTCTGCCACCATGAACTaGATTGTTCTGCCATCCTTC +
Preference number: 2 (lower is better)
Translates to: LSLPCSLERLRSPPLSLASATMN*IVLPSF
Trigger: GAAGGATGGCAGAACAATTCAGTTCATGGTGGCAGA...AGCTAGGGACAAGGGAGGAGAGCGTAGCCTCTCTAGGGAACATGGCAGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR CAA 90 bp TGTGTAAGGGGGTCAGAGGACACCTCAGGTATTGTTCTTCAGGACTaGTCAACCTTGTTTCTTGAGACAGGGGCTTGCCTGTCAGTAGGC +
Preference number: 2 (lower is better)
Translates to: CVRGSEDTSGIVLQD*STLFLETGACLSVG
Trigger: GCCTACTGACAGGCAAGCCCCTGTCTCAAGAAACAAGGTTGACAAGTCCTGAAGAACAATACCTGAGGTGTCCTCTGACCCCCTTACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR GCA 90 bp CCCACATTTAGAGAAGTCCAGAGCTCTGTTCTCCTTGCTCACTTTAGGCAGCCGCAGATGCTGCCCGCATaGTATGGTGCAGTCTTTTTC +
Preference number: 2 (lower is better)
Translates to: PTFREVQSSVLLAHFRQPQMLPA*YGAVFF
Trigger: GAAAAAGACTGCACCATAGCATGCGGGCAGCATCTG...CGGCTGCCTAAAGTGAGCAAGGAGAACAGAGCTCTGGACTTCTCTAAATGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR GCA 90 bp GGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGAGAACCCATATCCTTTATaGACTACGCACATGGCACTC +
Preference number: 2 (lower is better)
Translates to: GQDSCTRQSFDLQELLAENPYPL*TTHMAL
Trigger: GAGTGCCATGTGCGTAGTGCATAAAGGATATGGGTT...CTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR TCA 90 bp CCCACATTTAGAGAAGTCCAGAGCTCTGTTCTCCTTGCTCACTTTAGGCAGCCGGACAGGAAGACAGGCTaGATTCTGATTCCACAGGAT +
Preference number: 2 (lower is better)
Translates to: PTFREVQSSVLLAHFRQPDRKTG*ILIPQD
Trigger: ATCCTGTGGAATCAGAATTCAGCCTGTCTTCCTGTC...CGGCTGCCTAAAGTGAGCAAGGAGAACAGAGCTCTGGACTTCTCTAAATGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR TCA 90 bp GGTGGGCAGTTGAAGGTTATATATTGCACGAATCCCTGGCTACAGTCCCTTCTAGGTCACTGCTGTGGCTaGTTTAGCCATGCCACAGTA +
Preference number: 2 (lower is better)
Translates to: GGQLKVIYCTNPWLQSLLGHCCG*FSHATV
Trigger: TACTGTGGCATGGCTAAATCAGCCACAGCAGTGACC...TAGAAGGGACTGTAGCCAGGGATTCGTGCAATATATAACCTTCAACTGCCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR CCA 90 bp AGCCAGCAGCCAGCCCACTGTAGACTCTGGTGTCCTCTGGTTGACTCATCAGCTAAACCGATCTGTATGTaGACAAAACAGAGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: SQQPAHCRLWCPLVDSSAKPICM*TKQRRS
Trigger: GCTTCTTCTCTGTTTTGTCCACATACAGATCGGTTT...AGCTGATGAGTCAACCAGAGGACACCAGAGTCTACAGTGGGCTGGCTGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CCA 90 bp GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGTGCTGTTGTTGGAGGTaGGTTAGTTTTCCTTATGTG +
Preference number: 2 (lower is better)
Translates to: AVPKADLRHQTGHSTGEECCCWR*VSFPYV
Trigger: CACATAAGGAAAACTAACCCACCTCCAACAACAGCA...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CCA 90 bp TTACCAGCACAAAGGCCCTCTGTGACTGGCTGCCTACAGGTTCTAACAGACTGTGTCCTCTGCTGTTGTTaGAGGTGGGTTAGTTTTCCT +
Preference number: 2 (lower is better)
Translates to: LPAQRPSVTGCLQVLTDCVLCCC*RWVSFP
Trigger: AGGAAAACTAACCCACCTCCAACAACAGCAGAGGAC...ACAGTCTGTTAGAACCTGTAGGCAGCCAGTCACAGAGGGCCTTTGTGCTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR TCA 90 bp ACGGGCAGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTTCCTACACCAACTTTTaGAAGGAAGGCTCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: TGRKRSSVDNVGIITSHPSYTNF*KEGSGG
Trigger: GCCTCCTGAGCCTTCCTTTCAAAAGTTGGTGTAGGA...AGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCTGCCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR GCA 90 bp ACGGGCAGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTGGGTACAGATGGCTCTaGTGGCTTACCAAATGCAAG +
Preference number: 2 (lower is better)
Translates to: TGRKRSSVDNVGIITSHPGYRWL*WLTKCK
Trigger: CTTGCATTTGGTAAGCCAGCAGAGCCATCTGTACCC...AGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCTGCCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR CAA 90 bp GGTTTACCAGAGGAGGCTGGAGGCTGGAGAAGCCTCAGAGTGATGTaGATTCTGCATAGTTCTAGTGGAAATATGGAAGCCAGAACCTTA +
Preference number: 2 (lower is better)
Translates to: GLPEEAGGWRSLRVM*ILHSSSGNMEARTL
Trigger: TAAGGTTCTGGCTTCCATATTTCCACTAGAACTATGCAGAATCAACATCACTCTGAGGCTTCTCCAGCCTCCAGCCTCCTCTGGTAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR TCA 90 bp TGTAGACAATGTAGGAATAATAACCAGCCACCCTGCGCATCACTGACCACAGACCTAGAGAAGTGTTTCTaGGCTTCTGTGTACAGGCTC +
Preference number: 2 (lower is better)
Translates to: CRQCRNNNQPPCASLTTDLEKCF*ASVYRL
Trigger: GAGCCTGTACACAGAAGCTCAGAAACACTTCTCTAG...GTCTGTGGTCAGTGATGCGCAGGGTGGCTGGTTATTATTCCTACATTGTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR CCA 90 bp AAGTCTAGTATCCAGGAAGTTCACTGTGTCTGTTCCATGGACAAACAGATGGACCACCCAAGAGTCTTCTaGAGTCAGGTCCAGCTGTGT +
Preference number: 2 (lower is better)
Translates to: KSSIQEVHCVCSMDKQMDHPRVF*SQVQLC
Trigger: ACACAGCTGGACCTGACTCCAGAAGACTCTTGGGTG...GTCCATCTGTTTGTCCATGGAACAGACACAGTGAACTTCCTGGATACTAGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CCA 90 bp TGTAGACAATGTAGGAATAATAACCAGCCACCCTGCGCATCACTGACCACAGACTACAGATGGCTCTGCTaGCTTACCAAATGCAAGGAG +
Preference number: 2 (lower is better)
Translates to: CRQCRNNNQPPCASLTTDYRWLC*LTKCKE
Trigger: CTCCTTGCATTTGGTAAGCCAGCAGAGCCATCTGTA...GTCTGTGGTCAGTGATGCGCAGGGTGGCTGGTTATTATTCCTACATTGTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR CAA 90 bp CCAGGCCAGCCTAGAAAACCTGACAGTTCTTTCAGTCTGGCTCTATaGCAAACTGTAAAGACAGGGGAAACCGATCTGTATGTGGACAAA +
Preference number: 2 (lower is better)
Translates to: PGQPRKPDSSFSLAL*QTVKTGETDLYVDK
Trigger: TTTGTCCACATACAGATCGGTTTCCCCTGTCTTTACAGTTTGCAATAGAGCCAGACTGAAAGAACTGTCAGGTTTTCTAGGCTGGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR TCA 90 bp AGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTGCGCATGTGAAGCCACGAGAGTaGAGTTTAAGTGTCAGTGGA +
Preference number: 2 (lower is better)
Translates to: RKRSSVDNVGIITSHPAHVKPRE*SLSVSG
Trigger: TCCACTGACACTTAAACTTCACTCTCGTGGCTTCAC...ATGCGCAGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR TCA 90 bp CTCCAGTCACTCAGGGATCTCTCTATTCTTTCAAGTCATGAGCTGTCGGTAGCTAGCCTCCTAAAACCATaGACCAGAACCATAAACAGT +
Preference number: 2 (lower is better)
Translates to: LQSLRDLSILSSHELSVASLLKP*TRTINS
Trigger: ACTGTTTATGGTTCTGGTTCATGGTTTTAGGAGGCT...AGCTACCGACAGCTCATGACTTGAAAGAATAGAGAGATCCCTGAGTGACTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR GCA 90 bp AAAGCAAACTGGAAGAAGATGTCACAGAGAAGGACCACTTTGGACTGGGACAAATGCTGGCTTACCAAATaGAAGGAGTCATGGTGGCTT +
Preference number: 2 (lower is better)
Translates to: KANWKKMSQRRTTLDWDKCWLTK*KESWWL
Trigger: AAGCCACCATGACTCCTTGCATTTGGTAAGCCAGCA...TTTGTCCCAGTCCAAAGTGGTCCTTCTCTGTGACATCTTCTTCCAGTTTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR GCA 90 bp AGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTGCGCATCTACAGTCCCTTCTATaGCTCCTGATCTATCACCAT +
Preference number: 2 (lower is better)
Translates to: RKRSSVDNVGIITSHPAHLQSLL*LLIYHH
Trigger: ATGGTGATAGATCAGGAGGCATAGAAGGGACTGTAG...ATGCGCAGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR CCA 90 bp AGAACATTCCAAAGCCAATGTAAAAGGGCACCACAGATCTACAAATCTCAGGAATCTGTACTAGGGAAGTaGGAGTCACTGCTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: RTFQSQCKRAPQIYKSQESVLGK*ESLLCG
Trigger: CCCACACAGCAGTGACTCCCACTTCCCTAGTACAGA...TTCCTGAGATTTGTAGATCTGTGGTGCCCTTTTACATTGGCTTTGGAATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR CCA 90 bp AGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTGCGCATCACAGCAAAGCAAACTaGAAGAAGATGTCACAGAGA +
Preference number: 2 (lower is better)
Translates to: RKRSSVDNVGIITSHPAHHSKAN*KKMSQR
Trigger: TCTCTGTGACATCTTCTTCCAGTTTGCTTTGCTGTG...ATGCGCAGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR CCA 90 bp AGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTGCGCATCGAAAAGCGAACAATTaGCCAGAACTGAGTTTAAAG +
Preference number: 2 (lower is better)
Translates to: RKRSSVDNVGIITSHPAHRKANN*PELSLK
Trigger: CTTTAAACTCAGTTCTGGCCAATTGTTCGCTTTTCG...ATGCGCAGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR CCA 72 bp ATCAGGTGGGGTCCCTCCTGGGATGACAGTGAGCCGTaGGGTGGCACCTGGCCCAGGCACATCCCATGGGCT +
Preference number: 3 (lower is better)
Translates to: IRWGPSWDDSEP*GGTWPRHIPWA
Trigger: AGCCCATGGGATGTGCCTGGGCCAGGTGCCACCCCACGGCTCACTGTCATCCCAGGAGGGACCCCACCTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp CCCACTCAGCCTGGGCCAGTGTGCTCAGCTCCAGCTTaGCAAGACAGGAGCCCGTGTGAGGCCCCCAGGTTC +
Preference number: 3 (lower is better)
Translates to: PTQPGPVCSAPA*QDRSPCEAPRF
Trigger: GAACCTGGGGGCCTCACACGGGCTCCTGTCTTGCCAAGCTGGAGCTGAGCACACTGGCCCAGGCTGAGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR GCA 72 bp CCCAAGAGAGAAGGTGGGCCCTGCAGTGTTGGGCTGTaGCAGGCCCACAGCAAAAGGAGCGTGGGCACATCC +
Preference number: 3 (lower is better)
Translates to: PKREGGPCSVGL*QAHSKRSVGTS
Trigger: GGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACACTGCAGGGCCCACCTTCTCTCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp GTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTaGGCACATCCACCGCCCTTCCTGGGGACACCAATG +
Preference number: 3 (lower is better)
Translates to: VLGCARPTAKGA*AHPPPFLGTPM
Trigger: CATTGGTGTCCCCAGGAAGGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp GGAGAGGAGCCAGGGAACCATGGAGGCTTGTGGACTTaGCTCGGGAGACTTGTGTGGCCCCTGCAGAGGCTG +
Preference number: 3 (lower is better)
Translates to: GEEPGNHGGLWT*LGRLVWPLQRL
Trigger: CAGCCTCTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 72 bp GAGGTGAGTTACGGAGCTGGCCACGGCCAGGGGCTCTaGAGATGGAATGCCAACTTGCTCGGCCCGGGAATG +
Preference number: 3 (lower is better)
Translates to: EVSYGAGHGQGL*RWNANLLGPGM
Trigger: CATTCCCGGGCCGAGCAAGTTGGCATTCCATCTTCAGAGCCCCTGGCCGTGGCCAGCTCCGTAACTCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR CCA 72 bp GGCAGCAGAGAAAGCTCCAAGCCTACACTGGGCCTCTaGGCCTCTAGGGCGCCAATGCCACTCTTAGTGGGG +
Preference number: 3 (lower is better)
Translates to: GSRESSKPTLGL*ASRAPMPLLVG
Trigger: CCCCACTAAGAGTGGCATTGGCGCCCTAGAGGCCCAGAGGCCCAGTGTAGGCTTGGAGCTTTCTCTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp CCAGGAGGGTACCCAGGAGAGCAGAGGCTCAAGGGCTaGCAGGAGAGTGACCAAGGTCTACCTTCAGGGCAC +
Preference number: 3 (lower is better)
Translates to: PGGYPGEQRLKG*QESDQGLPSGH
Trigger: GTGCCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGCCCTTGAGCCTCTGCTCTCCTGGGTACCCTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp TCCACAGGAGAGGAGCCAGGGAACCATGGAGGCTTGTaGACTTGGCTCGGGAGACTTGTGTGGCCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: STGEEPGNHGGL*TWLGRLVWPLQ
Trigger: CTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CAA 90 bp GTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTGGGCACATCCACCGCCCCTGGGTCTCTCAATCTaGCAGCTTTTCCTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: VLGCARPTAKGAWAHPPPLGLSI*QLFLGG
Trigger: TCCTCCCAGGAAAAGCTGCAAGATTGAGAGACCCAG...GGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR GCA 72 bp CATCAGCTCAGGTCACTGCCTCGTCAGTACTCCTGCTaGCTCTCCCTGATCCCCAGATGGCCCCAGACAGTC +
Preference number: 3 (lower is better)
Translates to: HQLRSLPRQYSC*LSLIPRWPQTV
Trigger: GACTGTCTGGGGCCATCTGGGGATCAGGGAGAGGCAGCAGGAGTACTGACGAGGCAGTGACCTGAGCTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR GCA 72 bp ACTTGTTTGCTCTGCCCCACTCAGCCTGGGCCAGTGTaGTCAGCTCCAGCTTGGCAAGACAGGAGCCCGTGT +
Preference number: 3 (lower is better)
Translates to: TCLLCPTQPGPV*SAPAWQDRSPC
Trigger: ACACGGGCTCCTGTCTTGCCAAGCTGGAGCTGAGCACACTGGCCCAGGCTGAGTGGGGCAGAGCAAACAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp GGCCACTTCCAGACTGCAGGACTTCTCAGTCGGGGATaGCCCTTCCTCTCCCAACTGCAGCTGGGTCTCTCA +
Preference number: 3 (lower is better)
Translates to: GHFQTAGLLSRG*PFLSQLQLGLS
Trigger: TGAGAGACCCAGCTGCAGTTGGGAGAGGAAGGGCCATCCCCGACTGAGAAGTCCTGCAGTCTGGAAGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp ATAGTGTCAGGCCAGCGGATGATGAGGAGCATCAGGTaGGGTCCCTCCTGGGATGACAGTGAGCCGTGGGGT +
Preference number: 3 (lower is better)
Translates to: IVSGQRMMRSIR*GPSWDDSEPWG
Trigger: ACCCCACGGCTCACTGTCATCCCAGGAGGGACCCCACCTGATGCTCCTCATCATCCGCTGGCCTGACACTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR GCA 72 bp ACTCATCAGCTCAGGTCACTGCCTCGTCAGTACTCCTaGTGCCTCTCCCTGATCCCCAGATGGCCCCAGACA +
Preference number: 3 (lower is better)
Translates to: THQLRSLPRQYS*CLSLIPRWPQT
Trigger: TGTCTGGGGCCATCTGGGGATCAGGGAGAGGCAGCAGGAGTACTGACGAGGCAGTGACCTGAGCTGATGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR GCA 72 bp CCTCCCTCTAAGGTGAGAGATCCCCTTCCACTTGTTTaGTCTGCCCCACTCAGCCTGGGCCAGTGTGCTCAG +
Preference number: 3 (lower is better)
Translates to: PPSKVRDPLPLV*SAPLSLGQCAQ
Trigger: CTGAGCACACTGGCCCAGGCTGAGTGGGGCAGAGCAAACAAGTGGAAGGGGATCTCTCACCTTAGAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp GCCAGCAGCCAGCCCACTGTAGACTCTGGTGTCCTCTaGTTGACTCATCAGCTCAGGTCACTGCCTCGTCAG +
Preference number: 3 (lower is better)
Translates to: ASSQPTVDSGVL*LTHQLRSLPRQ
Trigger: CTGACGAGGCAGTGACCTGAGCTGATGAGTCAACCAGAGGACACCAGAGTCTACAGTGGGCTGGCTGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CAA 90 bp GTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTGGGCACATCCACCGCCCTTCAGTCTGGCTCTATaGCAAACTGTAAAGACAGGG +
Preference number: 3 (lower is better)
Translates to: VLGCARPTAKGAWAHPPPFSLAL*QTVKTG
Trigger: CCCTGTCTTTACAGTTTGCAATAGAGCCAGACTGAA...GGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 72 bp CGCTGGATCTACACCTTCGGCCACCTCCCTCTAAGGTaGGAGATCCCCTTCCACTTGTTTGCTCTGCCCCAC +
Preference number: 3 (lower is better)
Translates to: RWIYTFGHLPLR*EIPFHLFALPH
Trigger: GTGGGGCAGAGCAAACAAGTGGAAGGGGATCTCTCACCTTAGAGGGAGGTGGCCGAAGGTGTAGATCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 72 bp GAGGGTGAGATTGGAAATGGGAAGGTCTTGCTGCTATaGAGGTGGCGGGGATGGCAGCTCCCTCGCTGGATC +
Preference number: 3 (lower is better)
Translates to: EGEIGNGKVLLL*RWRGWQLPRWI
Trigger: GATCCAGCGAGGGAGCTGCCATCCCCGCCACCTTCATAGCAGCAAGACCTTCCCATTTCCAATCTCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp AACAGGACACTCCACAGGAGAGGAGCCAGGGAACCATaGAGGCTTGTGGACTTGGCTCGGGAGACTTGTGTG +
Preference number: 3 (lower is better)
Translates to: NRTLHRRGAREP*RLVDLARETCV
Trigger: CACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGAGTGTCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 72 bp CTGGTGTGGCCCTGCTCTCAGTCCCCTCGGACTAGATaGCACATGGTAGTTGGCAGCAGAGAAAGCTCCAAG +
Preference number: 3 (lower is better)
Translates to: LVWPCSQSPRTR*HMVVGSRESSK
Trigger: CTTGGAGCTTTCTCTGCTGCCAACTACCATGTGTCATCTAGTCCGAGGGGACTGAGAGCAGGGCCACACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 72 bp ACCCTGCTGGACAAGGGCTGCCTAGAGAAGTGTTTCTaGGCTTCTGTGTACAGGCTCTCAGAGGCAGCGGGA +
Preference number: 3 (lower is better)
Translates to: TLLDKGCLEKCF*ASVYRLSEAAG
Trigger: TCCCGCTGCCTCTGAGAGCCTGTACACAGAAGCTCAGAAACACTTCTCTAGGCAGCCCTTGTCCAGCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR GCA 72 bp GACTTCTCAGTCGGGGATGGCCCTTCCTCTCCCAACTaGAGCTGGGTCTCTCAATCTTGCAGCTTTTCCTGG +
Preference number: 3 (lower is better)
Translates to: DFSVGDGPSSPN*SWVSQSCSFSW
Trigger: CCAGGAAAAGCTGCAAGATTGAGAGACCCAGCTGCAGTTGGGAGAGGAAGGGCCATCCCCGACTGAGAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp CAGTTCCCAAGCCTGACCTTTTCCTGCCTCCCTGTCTaGGGGACAATGAGCAAGACCAGAGCCCTTACTCCT +
Preference number: 3 (lower is better)
Translates to: QFPSLTFSCLPV*GTMSKTRALTP
Trigger: AGGAGTAAGGGCTCTGGTCTTGCTCATTGTCCCCCAGACAGGGAGGCAGGAAAAGGTCAGGCTTGGGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CAA 90 bp CAGGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGTCTGTGACTCAACACTaGGTCTCAGGGGAGTCCTGC +
Preference number: 3 (lower is better)
Translates to: QARTAVPARALIFKSFWLSVTQH*VSGESC
Trigger: GCAGGACTCCCCTGAGACCAAGTGTTGAGTCACAGA...CAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CAA 90 bp GAGGTGCAGCCAAGGCACCCTGCTGGACAAGGGCTGCCTAGAGAAGTGTTTCTGAGGAGTCATGGTGGCTaGACTGACATTCATGCGTGT +
Preference number: 3 (lower is better)
Translates to: EVQPRHPAGQGLPREVFLRSHGG*TDIHAC
Trigger: ACACGCATGAATGTCAGTCAAGCCACCATGACTCCT...CAGAAACACTTCTCTAGGCAGCCCTTGTCCAGCAGGGTGCCTTGGCTGCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR TCA 72 bp AGACTGTGCCTGTCATTTCTGGAGGTCTGGCCTGGGTaGTTTACAGCCCTTCCTTCCCACTGTCCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: RLCLSFLEVWPG*FTALPSHCPLL
Trigger: CAGCAGAGGACAGTGGGAAGGAAGGGCTGTAAATCACCCAGGCCAGACCTCCAGAAATGACAGGCACAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR GCA 72 bp CCTTCCTCTCCCAACTGCAGCTGGGTCTCTCAATCTTaGAGCTTTTCCTGGGAGGATCTCCAGTTCCCAAGC +
Preference number: 3 (lower is better)
Translates to: PSSPNCSWVSQS*SFSWEDLQFPS
Trigger: GCTTGGGAACTGGAGATCCTCCCAGGAAAAGCTGCAAGATTGAGAGACCCAGCTGCAGTTGGGAGAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR GCA 72 bp TGGCTAGTCAGTGAATCCCAGGGATTCACCCATCGCTaGCTCCCTAGTGCTGTGATGACAAGCAGTTGTCCC +
Preference number: 3 (lower is better)
Translates to: WLVSESQGFTHR*LPSAVMTSSCP
Trigger: GGGACAACTGCTTGTCATCACAGCACTAGGGAGGCAGCGATGGGTGAATCCCTGGGATTCACTGACTAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR CCA 72 bp AGGCAGGGTGTTACCAGCACAAAGGCCCTCTGTGACTaGCTGCCTACAGGTTCTAACAGACTGTGCCTGTCA +
Preference number: 3 (lower is better)
Translates to: RQGVTSTKALCD*LPTGSNRLCLS
Trigger: TGACAGGCACAGTCTGTTAGAACCTGTAGGCAGCCAGTCACAGAGGGCCTTTGTGCTGGTAACACCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 72 bp CCCACTAAGCCACCTCCTCAGTCCTACACCAACTTTTaGAAGGAAGGCTCAGGAGGCCATCAGCAAGCAGAG +
Preference number: 3 (lower is better)
Translates to: PTKPPPQSYTNF*KEGSGGHQQAE
Trigger: CTCTGCTTGCTGATGGCCTCCTGAGCCTTCCTTTCAAAAGTTGGTGTAGGACTGAGGAGGTGGCTTAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR TCA 72 bp TCCATGGTGTTAAATCTACTTATCTCTGAGGAGCAGTaGGGTGAGTTACGGAGCTGGCCACGGCCAGGGGCT +
Preference number: 3 (lower is better)
Translates to: SMVLNLLISEEQ*GELRSWPRPGA
Trigger: AGCCCCTGGCCGTGGCCAGCTCCGTAACTCACCTCACTGCTCCTCAGAGATAAGTAGATTTAACACCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR GCA 72 bp CACTCTGTGACTCAACACTTGGTCTCAGGGGAGTCCTaGAAACGCTATGGACAGCCTAGAGTGGAACCTGCT +
Preference number: 3 (lower is better)
Translates to: HSVTQHLVSGES*KRYGQPRVEPA
Trigger: AGCAGGTTCCACTCTAGGCTGTCCATAGCGTTTGCAGGACTCCCCTGAGACCAAGTGTTGAGTCACAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 72 bp GCCTCTAAAGCAGGGTGCTCCCAAAAGAGATGGTGGTaGATGGGAAGGCAGGGAACTCATCAGAGGAGAACT +
Preference number: 3 (lower is better)
Translates to: ASKAGCSQKRWW*MGRQGTHQRRT
Trigger: AGTTCTCCTCTGATGAGTTCCCTGCCTTCCCATTCACCACCATCTCTTTTGGGAGCACCCTGCTTTAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 72 bp TGGTCAGTGGGTACTAAAAAGAACCCTCTAGAAAGATaGCATCTGGTGTGGCCCTGCTCTCAGTCCCCTCGG +
Preference number: 3 (lower is better)
Translates to: WSVGTKKNPLER*HLVWPCSQSPR
Trigger: CCGAGGGGACTGAGAGCAGGGCCACACCAGATGTCATCTTTCTAGAGGGTTCTTTTTAGTACCCACTGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 72 bp GGGAGAGGCCTAGCTAGCTCACTAGGGGTGGGCAGTTaGAGGTTATATATTGCACGAATCCCTGGCTACAGT +
Preference number: 3 (lower is better)
Translates to: GRGLASSLGVGS*RLYIARIPGYS
Trigger: ACTGTAGCCAGGGATTCGTGCAATATATAACCTTCAACTGCCCACCCCTAGTGAGCTAGCTAGGCCTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR GCA 72 bp CACGTAGGAACCACAGATGCTGCCCGCATGCTATGGTaGAGTCTTTTTCTCTCCCACCTTCTGATAGTGCTG +
Preference number: 3 (lower is better)
Translates to: HVGTTDAARMLW*SLFLSHLLIVL
Trigger: CAGCACTATCAGAAGGTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGCAGCATCTGTGGTTCCTACGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp CTAAAGCAGGGTGCTCCCAAAAGAGATGGTGGTGAATaGGAAGGCAGGGAACTCATCAGAGGAGAACTCAGG +
Preference number: 3 (lower is better)
Translates to: LKQGAPKRDGGE*EGRELIRGELR
Trigger: CCTGAGTTCTCCTCTGATGAGTTCCCTGCCTTCCCATTCACCACCATCTCTTTTGGGAGCACCCTGCTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp CCTCACGTAGGAACCACAGATGCTGCCCGCATGCTATaGTGCAGTCTTTTTCTCTCCCACCTTCTGATAGTG +
Preference number: 3 (lower is better)
Translates to: PHVGTTDAARML*CSLFLSHLLIV
Trigger: CACTATCAGAAGGTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGCAGCATCTGTGGTTCCTACGTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp AACTGCAGCTGGGTCTCTCAATCTTGCAGCTTTTCCTaGGAGGATCTCCAGTTCCCAAGCCTGACCTTTTCC +
Preference number: 3 (lower is better)
Translates to: NCSWVSQSCSFS*EDLQFPSLTFS
Trigger: GGAAAAGGTCAGGCTTGGGAACTGGAGATCCTCCCAGGAAAAGCTGCAAGATTGAGAGACCCAGCTGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp GGCTCAGGAACTGGTTTACCAGAGGAGGCTGGAGGCTaGAGAAGCCTCAGAGTGATGTTGATTCTGCATAGT +
Preference number: 3 (lower is better)
Translates to: GSGTGLPEEAGG*RSLRVMLILHS
Trigger: ACTATGCAGAATCAACATCACTCTGAGGCTTCTCCAGCCTCCAGCCTCCTCTGGTAAACCAGTTCCTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR CCA 72 bp AAAATCTGTACTAGGGAAGTGGGAGTCACTGCTGTGTaGGGGGTCACTGCTGTGGCTGATTTAGCCATGCCA +
Preference number: 3 (lower is better)
Translates to: KICTREVGVTAV*GVTAVADLAMP
Trigger: TGGCATGGCTAAATCAGCCACAGCAGTGACCCCCCACACAGCAGTGACTCCCACTTCCCTAGTACAGATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR CAA 90 bp CTGAGTCTGCCATGTTCCCTAGAGAGGCTACGCTCTCCTCCCTTGTCCCTAGCTAAACAAGAACAGTATTaGGGAAGCTTCCGGTCAGAA +
Preference number: 3 (lower is better)
Translates to: LSLPCSLERLRSPPLSLAKQEQY*GSFRSE
Trigger: TTCTGACCGGAAGCTTCCCAAATACTGTTCTTGTTT...AGCTAGGGACAAGGGAGGAGAGCGTAGCCTCTCTAGGGAACATGGCAGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR CAA 90 bp GAGTCTGAGTCTGCCATGTTCCCTAGAGAGGCTACGCTCTCCTCCCTTGTCCCTAGCCTCAGAGTGATGTaGATTCTGCATAGTTCTAGT +
Preference number: 3 (lower is better)
Translates to: ESESAMFPREATLSSLVPSLRVM*ILHSSS
Trigger: ACTAGAACTATGCAGAATCAACATCACTCTGAGGCT...AGGGACAAGGGAGGAGAGCGTAGCCTCTCTAGGGAACATGGCAGACTCAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR TCA 72 bp AGGCTACAGGCTTGGGCTGAGGACAGGAAGACAGGCTaGATTCTGATTCCACAGGATTGGCAACTACTTGAG +
Preference number: 3 (lower is better)
Translates to: RLQAWAEDRKTG*ILIPQDWQLLE
Trigger: CTCAAGTAGTTGCCAATCCTGTGGAATCAGAATTCAGCCTGTCTTCCTGTCCTCAGCCCAAGCCTGTAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 72 bp CCCATATCCTTTATGCACTACGCACATGGCACTCTGTaGCTCAACACTTGGTCTCAGGGGAGTCCTGCAAAC +
Preference number: 3 (lower is better)
Translates to: PISFMHYAHGTL*LNTWSQGSPAN
Trigger: GTTTGCAGGACTCCCCTGAGACCAAGTGTTGAGTCACAGAGTGCCATGTGCGTAGTGCATAAAGGATATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR TCA 72 bp GACAGAGTCTGGAGGCCATCCACTTCTAAGTGCTCTTaGAGGTCAAGTGTAGTCAGTCTGTCCCTGGCAACA +
Preference number: 3 (lower is better)
Translates to: DRVWRPSTSKCS*RSSVVSLSLAT
Trigger: TGTTGCCAGGGACAGACTGACTACACTTGACCTTCAAGAGCACTTAGAAGTGGATGGCCTCCAGACTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR GCA 72 bp AGCAGAGCTCGTCGTTGTATAGGGTACAGATGGCTCTaGTGGCTTACCAAATGCAAGGAGTCATGGTGGCTT +
Preference number: 3 (lower is better)
Translates to: SRARRCIGYRWL*WLTKCKESWWL
Trigger: AAGCCACCATGACTCCTTGCATTTGGTAAGCCAGCAGAGCCATCTGTACCCTATACAACGACGAGCTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR CCA 72 bp AGGAAGTTCACTGTGTCTGTTCCATGGACAAACAGATaGACCAATCCTCAGGCTTGCCCCATTGGTCAGTGG +
Preference number: 3 (lower is better)
Translates to: RKFTVSVPWTNR*TNPQACPIGQW
Trigger: CCACTGACCAATGGGGCAAGCCTGAGGATTGGTCCATCTGTTTGTCCATGGAACAGACACAGTGAACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp TTACAGCCCTTCCTTCCCACTGTCCTCTGCTGTTGTTaGAGGTGGGTTAGTTTTCCTTATGTGTCCCTACCC +
Preference number: 3 (lower is better)
Translates to: LQPFLPTVLCCC*RWVSFPYVSLP
Trigger: GGGTAGGGACACATAAGGAAAACTAACCCACCTCCAACAACAGCAGAGGACAGTGGGAAGGAAGGGCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp GCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTaGCTGAGGAGTCTGAAGCCAGAGCCCACATTTAGA +
Preference number: 3 (lower is better)
Translates to: AVPARALIFKSF*LRSLKPEPTFR
Trigger: TCTAAATGTGGGCTCTGGCTTCAGACTCCTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp AGAGCTCGTCGTTGTATAGGGTACAGATGGCTCTGCTaGCTTACCAAATGCAAGGAGTCATGGTGGCTTGAC +
Preference number: 3 (lower is better)
Translates to: RARRCIGYRWLC*LTKCKESWWLD
Trigger: GTCAAGCCACCATGACTCCTTGCATTTGGTAAGCCAGCAGAGCCATCTGTACCCTATACAACGACGAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR CCA 72 bp CAAGCCAAAAGTAAACCAGAAGAAAGCCCGACATGGTaGCACATGCCTTTGATTTCAGCACTCAGGGGACCG +
Preference number: 3 (lower is better)
Translates to: QAKSKPEESPTW*HMPLISALRGP
Trigger: CGGTCCCCTGAGTGCTGAAATCAAAGGCATGTGCCACCATGTCGGGCTTTCTTCTGGTTTACTTTTGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR TCA 72 bp TCCTTCCTTGTCATGACAGACAGCCTCCTAAAACCATaGACCAGAACCATAAACAGTTCCCCCTGGAAGCGG +
Preference number: 3 (lower is better)
Translates to: SFLVMTDSLLKP*TRTINSSPWKR
Trigger: CCGCTTCCAGGGGGAACTGTTTATGGTTCTGGTTCATGGTTTTAGGAGGCTGTCTGTCATGACAAGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR TCA 72 bp AGTTGCCAAAATGATTTAAAGCCAGGAAACTTGGGTTaGGTCGTGGCTCTGGTGCTTAGTGGGGTGACCGAC +
Preference number: 3 (lower is better)
Translates to: SCQNDLKPGNLG*VVALVLSGVTD
Trigger: GTCGGTCACCCCACTAAGCACCAGAGCCACGACTCAACCCAAGTTTCCTGGCTTTAAATCATTTTGGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR GCA 72 bp GTTCCATGGACAAACAGATGGACCAATCCTCAGGCTTaGCCCATTGGTCAGTGGGTACTAAAAAGAACCCTC +
Preference number: 3 (lower is better)
Translates to: VPWTNRWTNPQA*PIGQWVLKRTL
Trigger: GAGGGTTCTTTTTAGTACCCACTGACCAATGGGGCAAGCCTGAGGATTGGTCCATCTGTTTGTCCATGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR GCA 72 bp CTGGGTGATTTACAGCCCTTCCTTCCCACTGTCCTCTaGTGTTGTTGGAGGTGGGTTAGTTTTCCTTATGTG +
Preference number: 3 (lower is better)
Translates to: LGDLQPFLPTVL*CCWRWVSFPYV
Trigger: CACATAAGGAAAACTAACCCACCTCCAACAACAGCAGAGGACAGTGGGAAGGAAGGGCTGTAAATCACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR GCA 72 bp TGGGAGAGGATGAAGACCTCTTTCCTACTCTGTCTCTaGTTTGTAAGCAGTGTGACAGGAAGGGAGGGACAT +
Preference number: 3 (lower is better)
Translates to: WERMKTSFLLCL*FVSSVTGREGH
Trigger: ATGTCCCTCCCTTCCTGTCACACTGCTTACAAAGCAGAGACAGAGTAGGAAAGAGGTCTTCATCCTCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp AGTCTAGTATCCAGGAAGTTCACTGTGTCTGTTCCATaGACAAACAGATGGACCAATCCTCAGGCTTGCCCC +
Preference number: 3 (lower is better)
Translates to: SLVSRKFTVSVP*TNRWTNPQACP
Trigger: GGGGCAAGCCTGAGGATTGGTCCATCTGTTTGTCCATGGAACAGACACAGTGAACTTCCTGGATACTAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR-3UTR CAA 90 bp GTGGCAAACTGTAACCCACAGAAGGCTCCAGGATGTCAGGCTAAACATTCATTTTGTGATGACAAGCAGTaGTCCCTCTCCCCACTAAGC +
Preference number: 3 (lower is better)
Translates to: VANCNPQKAPGCQAKHSFCDDKQ*SLSPLS
Trigger: GCTTAGTGGGGAGAGGGACAACTGCTTGTCATCACA...AAATGAATGTTTAGCCTGACATCCTGGAGCCTTCTGTGGGTTACAGTTTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR CAA 90 bp ACGGGCAGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTCAGGACTTGTCAACCTaGTTTCTTGAGACAGGGGCT +
Preference number: 3 (lower is better)
Translates to: TGRKRSSVDNVGIITSHPQDLST*FLETGA
Trigger: AGCCCCTGTCTCAAGAAACAAGGTTGACAAGTCCTG...AGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCTGCCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR TCA 72 bp AGGTATTGTTCTTCAGGACTTGTCAACCTTGTTTCTTaGGACAGGGGCTTGCCTGTCAGTAGGCTAGACTGG +
Preference number: 3 (lower is better)
Translates to: RYCSSGLVNLVS*DRGLPVSRLDW
Trigger: CCAGTCTAGCCTACTGACAGGCAAGCCCCTGTCTCAAGAAACAAGGTTGACAAGTCCTGAAGAACAATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR TCA 72 bp GGGAAGCTTCCGGTCAGAACAAGGGCTCTAGTGAACTaGATATGGCCCTTAGTGCATTCTGGGAAAACATCT +
Preference number: 3 (lower is better)
Translates to: GKLPVRTRALVN*IWPLVHSGKTS
Trigger: AGATGTTTTCCCAGAATGCACTAAGGGCCATATTCAGTTCACTAGAGCCCTTGTTCTGACCGGAAGCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR TCA 72 bp AACACATGTGCACGTGGCTGGAGCCTCACAAAGGAGTaGGAAAGGAGACGGGTAGAAGAGTTATTTGATGAG +
Preference number: 3 (lower is better)
Translates to: NTCARGWSLTKE*ERRRVEELFDE
Trigger: CTCATCAAATAACTCTTCTACCCGTCTCCTTTCTCACTCCTTTGTGAGGCTCCAGCCACGTGCACATGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR CAA 90 bp ACGGGCAGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTAGTGGGGTGACCGACTaGATCTTCAGGGTTTCTTTT +
Preference number: 3 (lower is better)
Translates to: TGRKRSSVDNVGIITSHPSGVTD*IFRVSF
Trigger: AAAAGAAACCCTGAAGATCAAGTCGGTCACCCCACT...AGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCTGCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR CAA 90 bp AAAGCAAACTGGAAGAAGATGTCACAGAGAAGGACCACTTTGGACTGGGACAAAGTCCTACACCAACTTTaGAAAGGAAGGCTCAGGAGG +
Preference number: 3 (lower is better)
Translates to: KANWKKMSQRRTTLDWDKVLHQL*KGRLRR
Trigger: CCTCCTGAGCCTTCCTTTCAAAAGTTGGTGTAGGAC...TTTGTCCCAGTCCAAAGTGGTCCTTCTCTGTGACATCTTCTTCCAGTTTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR GCA 72 bp ATGCCTCCTGATCTATCACCATGTGAACAGTCTCTCTaGCACCATGAACTGAATTGTTCTGCCATCCTTCCT +
Preference number: 3 (lower is better)
Translates to: MPPDLSPCEQSL*HHELNCSAILP
Trigger: AGGAAGGATGGCAGAACAATTCAGTTCATGGTGGCAGAGAGACTGTTCACATGGTGATAGATCAGGAGGCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR CCA 72 bp GACAAACAGATGGACCAATCCTCAGGCTTGCCCCATTaGTCAGTGGGTACTAAAAAGAACCCTCTAGAAAGA +
Preference number: 3 (lower is better)
Translates to: DKQMDQSSGLPH*SVGTKKNPLER
Trigger: TCTTTCTAGAGGGTTCTTTTTAGTACCCACTGACCAATGGGGCAAGCCTGAGGATTGGTCCATCTGTTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CCA 72 bp ACAAAAACGTTCTTTGATGGTACTTCAGGAAGGAAGTaGCAAACTGTAACCCACAGAAGGCTCCAGGATGTC +
Preference number: 3 (lower is better)
Translates to: TKTFFDGTSGRK*QTVTHRRLQDV
Trigger: GACATCCTGGAGCCTTCTGTGGGTTACAGTTTGCCACTTCCTTCCTGAAGTACCATCAAAGAACGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR-3UTR CAA 90 bp AGAAAGCGTAGCTCTGTAGACAATGTAGGAATAATAACCAGCCACCCTGCGCATCTGGATCCGTTATCATaGTTAATAAAAGGGCACTCA +
Preference number: 3 (lower is better)
Translates to: RKRSSVDNVGIITSHPAHLDPLS*LIKGHS
Trigger: TGAGTGCCCTTTTATTAACAATGATAACGGATCCAG...ATGCGCAGGGTGGCTGGTTATTATTCCTACATTGTCTACAGAGCTACGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
CDS-3UTR TCA 90 bp GTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTGGGCACATCCACCGCCCCACGGCTGCCATGGCTaGGTAGTTCCCACCGCAGGC +
Preference number: 4 (lower is better)
Translates to: VLGCARPTAKGAWAHPPPHGCHG*VVPTAG
Trigger: GCCTGCGGTGGGAACTACTCAGCCATGGCAGCCGTG...GGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR TCA 90 bp GGCCCTTCCTCTCCCAACTGCAGCTGGGTCTCTCAATCTTGCAGCTTTTCCTGGGCCGGGCCGCCAGAGTaGGCGCAGCGGCGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GPSSPNCSWVSQSCSFSWAGPPE*AQRRRA
Trigger: TGCTCTCCGCCGCTGCGCTCACTCTGGCGGCCCGGC...CCAGGAAAAGCTGCAAGATTGAGAGACCCAGCTGCAGTTGGGAGAGGAAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR GCA 90 bp GGAAGGTCTTGCTGCTATGAAGGTGGCGGGGATGGCAGCTCCCTCGCTGGATCTTCCCCACCGCAGGGCTaGGTGTGGTCCCCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GRSCCYEGGGDGSSLAGSSPPQG*VWSPKQ
Trigger: CTGCTTCGGGGACCACACGCAGCCCTGCGGTGGGGA...AGATCCAGCGAGGGAGCTGCCATCCCCGCCACCTTCATAGCAGCAAGACCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CAA 72 bp AGGAGAGGAGCCAGGGAACCATGGAGGCTTGTGGACTaGGCTCGGGAGACTTGTGTGGCCCCTGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RRGAREPWRLVD*ARETCVAPAEA
Trigger: AGCCTCTGCAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CAA 72 bp CACTCCACAGGAGAGGAGCCAGGGAACCATGGAGGCTaGTGGACTTGGCTCGGGAGACTTGTGTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HSTGEEPGNHGG*WTWLGRLVWPL
Trigger: CAGGGGCCACACAAGTCTCCCGAGCCAAGTCCACAAGCCTCCATGGTTCCCTGGCTCCTCTCCTGTGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR GCA 90 bp GGCGCGAGCTCTGATAGTGTCAGGCCAGCGGATGATGAGGAGCATCAGGTGGGGCGAAGCAGACACTATTaGACTCGGTGCTGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GASSDSVRPADDEEHQVGRSRHY*TRCWPP
Trigger: AGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCG...CCCCACCTGATGCTCCTCATCATCCGCTGGCCTGACACTATCAGAGCTCGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp GGAAGGTCTTGCTGCTATGAAGGTGGCGGGGATGGCAGCTCCCTCGCTGGATCTACACCACGGCTGCCATaGCTGAGTAGTTCCCACCGC +
Preference number: 4 (lower is better)
Translates to: GRSCCYEGGGDGSSLAGSTPRLP*LSSSHR
Trigger: GCGGTGGGAACTACTCAGCCATGGCAGCCGTGGTGT...AGATCCAGCGAGGGAGCTGCCATCCCCGCCACCTTCATAGCAGCAAGACCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp GAGGATCTCCAGTTCCCAAGCCTGACCTTTTCCTGCCTCCCTGTCTGGGGGACAAGCAGGTCTCTCCTGTaGCGGTTCCTCCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: EDLQFPSLTFSCLPVWGTSRSLL*RFLLGG
Trigger: GCCACCAAGGAGGAACCGCCACAGGAGAGACCTGCT...TGTCCCCCAGACAGGGAGGCAGGAAAAGGTCAGGCTTGGGAACTGGAGATCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp AGCCAGCAGCCAGCCCACTGTAGACTCTGGTGTCCTCTGGTTGACTCATCAGCTGACGGTGCCCAGGAATaGCTACCTGGGGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: SQQPAHCRLWCPLVDSSADGAQE*LPGAVC
Trigger: GCAGACTGCCCCAGGTAGCCATTCCTGGGCACCGTC...AGCTGATGAGTCAACCAGAGGACACCAGAGTCTACAGTGGGCTGGCTGCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR TCA 90 bp GGCGCGAGCTCTGATAGTGTCAGGCCAGCGGATGATGAGGAGCATCAGGTGGGGTTTTACTGGTGCCCGTaGGAGGAGGTGGGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GASSDSVRPADDEEHQVGFYWCP*EEVGFH
Trigger: ATGGAAACCCACCTCCTCTCACGGGCACCAGTAAAA...CCCCACCTGATGCTCCTCATCATCCGCTGGCCTGACACTATCAGAGCTCGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp GGAAGGTCTTGCTGCTATGAAGGTGGCGGGGATGGCAGCTCCCTCGCTGGATCTGTTCCAGAACAGACATaGCTTCCCACCTTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: GRSCCYEGGGDGSSLAGSVPEQT*LPTLQR
Trigger: GCGCTGCAAGGTGGGAAGCCATGTCTGTTCTGGAAC...AGATCCAGCGAGGGAGCTGCCATCCCCGCCACCTTCATAGCAGCAAGACCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp GGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGAGCCGCAGGGCTGCGTGTaGTCCCCGAAGCAGACACTA +
Preference number: 4 (lower is better)
Translates to: GQDSCTRQSFDLQELLAEPQGCV*SPKQTL
Trigger: TAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCGG...CTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp CCTGTCAGTAGGCTAGACTGGCTAGTCAGTGAATCCCAGGGATTCACCCATCGCCCGCAGGGCTGCGTGTaGTCCCCGAAGCAGACACTA +
Preference number: 4 (lower is better)
Translates to: PVSRLDWLVSESQGFTHRPQGCV*SPKQTL
Trigger: TAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCGG...GCGATGGGTGAATCCCTGGGATTCACTGACTAGCCAGTCTAGCCTACTGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
CDS-3UTR CCA 90 bp AGACAGTCCTGGGGAGCAGCAGCTAGAGGAGAGGCCTCAATGGCAGTGACTGAGGATGCGAGAGGCTCCTaGAACCCGGATGGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: RQSWGAAARGEASMAVTEDARGS*NPDGPV
Trigger: TACTGGACCATCCGGGTTCCAGGAGCCTCTCGCATC...CTCAGTCACTGCCATTGAGGCCTCTCCTCTAGCTGCTGCTCCCCAGGACTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp TCGGCTTACCCCTATGCTCCAGGCAGGGTGTTACCAGCACAAAGGCCCTCTGTGAGGACTTTGGAGGAGTaGGCAGCGCTGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: SAYPYAPGRVLPAQRPSVRTLEE*AALTLR
Trigger: CCTCAGTGTCAGCGCTGCCCACTCCTCCAAAGTCCT...CACAGAGGGCCTTTGTGCTGGTAACACCCTGCCTGGAGCATAGGGGTAAGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR TCA 90 bp GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGCTGCCAGGGTCTGGTTaGCAGCAGGTCTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: AVPKADLRHQTGHSTGEELPGSG*QQVSPV
Trigger: CACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAG...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR GCA 90 bp GCTGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGCACAGCTGCTGCTGACAAACATGGCTTCCCACCTTaGAGCGCTGTCCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: AGRRVTKVYLQGTAAADKHGFPP*SAVQLC
Trigger: ACAGAGCTGGACAGCGCTGCAAGGTGGGAAGCCATG...TTTGTCAGCAGCAGCTGTGCCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp TGCCCGCATGCTATGGTGCAGTCTTTTTCTCTCCCACCTTCTGATAGTGCTGGGCCACTCTGTGGCTGTTaGCCCCAACTGACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: CPHAMVQSFSLPPSDSAGPLCGC*PQLTVP
Trigger: GGGCACCGTCAGTTGGGGCCAACAGCCACAGAGTGG...CCCAGCACTATCAGAAGGTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR GCA 90 bp AGCCAGCAGCCAGCCCACTGTAGACTCTGGTGTCCTCTGGTTGACTCATCAGCTACACTGAGGTTGGCTTaGTCGGTGATCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SQQPAHCRLWCPLVDSSATLRLA*SVITSA
Trigger: GGCAGAGGTGATCACCGAGCAAGCCAACCTCAGTGT...AGCTGATGAGTCAACCAGAGGACACCAGAGTCTACAGTGGGCTGGCTGCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CAA 72 bp AGCAGCCAGCCCACTGTAGACTCTGGTGTCCTCTGGTaGACTCATCAGCTCAGGTCACTGCCTCGTCAGTAC +
Preference number: 4 (lower is better)
Translates to: SSQPTVDSGVLW*THQLRSLPRQY
Trigger: GTACTGACGAGGCAGTGACCTGAGCTGATGAGTCAACCAGAGGACACCAGAGTCTACAGTGGGCTGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CAA 72 bp GGCCCACAGGCCAGGACAGCTGTACCCGCCAGAGCTTaGATCTTCAAGAGCTTTTGGCTGAGGAGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GPQARTAVPARA*IFKSFWLRSLK
Trigger: CTTCAGACTCCTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTGTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR TCA 90 bp GAGGTGCAGCCAAGGCACCCTGCTGGACAAGGGCTGCCTAGAGAAGTGTTTCTGCCATCCCAGCAAACTTaGATCTCTGACTCCGACAGA +
Preference number: 4 (lower is better)
Translates to: EVQPRHPAGQGLPREVFLPSQQT*ISDSDR
Trigger: TCTGTCGGAGTCAGAGATTCAAGTTTGCTGGGATGG...CAGAAACACTTCTCTAGGCAGCCCTTGTCCAGCAGGGTGCCTTGGCTGCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
CDS-3UTR GCA 90 bp GTGGCAAACTGTAACCCACAGAAGGCTCCAGGATGTCAGGCTAAACATTCATTTTCCCCACCGCAGGGCTaGGTGTGGTCCCCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VANCNPQKAPGCQAKHSFSPPQG*VWSPKQ
Trigger: CTGCTTCGGGGACCACACGCAGCCCTGCGGTGGGGA...AAATGAATGTTTAGCCTGACATCCTGGAGCCTTCTGTGGGTTACAGTTTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
CDS-3UTR GCA 90 bp CTGGGTGATTTACAGCCCTTCCTTCCCACTGTCCTCTGCTGTTGTTGGAGGTGGTCCAGTAGCAGACTCTaGCAGTGGCGTAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LGDLQPFLPTVLCCCWRWSSSRL*QWRRCQ
Trigger: CTGACACCTACGCCACTGGCAGAGTCTGCTACTGGA...CCACCTCCAACAACAGCAGAGGACAGTGGGAAGGAAGGGCTGTAAATCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR GCA 90 bp GGAGAGCAGAGGCTCAAGGGCTGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGCAGCTCCACCATGTCTaGAGAGTCCCTGATATCAAA +
Preference number: 4 (lower is better)
Translates to: GEQRLKGWQESDQGLPSGQLHHV*RVPDIK
Trigger: TTTGATATCAGGGACTCTGCAGACATGGTGGAGCTG...CCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGCCCTTGAGCCTCTGCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp GGAGAGCAGAGGCTCAAGGGCTGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGGTGTTGTACGGATGCTaGAAAGTCTCGTTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: GEQRLKGWQESDQGLPSGVLYGC*KVSFQN
Trigger: GTTCTGGAACGAGACTTTCCAGCATCCGTACAACAC...CCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGCCCTTGAGCCTCTGCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp CTGGGTGATTTACAGCCCTTCCTTCCCACTGTCCTCTGCTGTTGTTGGAGGTGGCATCCTTCCACTCTGTaGCTGTTGGCCCCAACTGAC +
Preference number: 4 (lower is better)
Translates to: LGDLQPFLPTVLCCCWRWHPSTL*LLAPTD
Trigger: GTCAGTTGGGGCCAACAGCCACAGAGTGGAAGGATG...CCACCTCCAACAACAGCAGAGGACAGTGGGAAGGAAGGGCTGTAAATCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CAA 72 bp CCCTTCCTCTCCCAACTGCAGCTGGGTCTCTCAATCTaGCAGCTTTTCCTGGGAGGATCTCCAGTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: PFLSQLQLGLSI*QLFLGGSPVPK
Trigger: CTTGGGAACTGGAGATCCTCCCAGGAAAAGCTGCAAGATTGAGAGACCCAGCTGCAGTTGGGAGAGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR TCA 90 bp GACTCTGGTGTCCTCTGGTTGACTCATCAGCTCAGGTCACTGCCTCGTCAGTACGAAGCAGGCATAGCCTaGCTCCATCCCAGCAAACTT +
Preference number: 4 (lower is better)
Translates to: DSGVLWLTHQLRSLPRQYEAGIA*LHPSKL
Trigger: AAGTTTGCTGGGATGGAGTCAGGCTATGCCTGCTTC...GTACTGACGAGGCAGTGACCTGAGCTGATGAGTCAACCAGAGGACACCAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR TCA 90 bp GAGGATCTCCAGTTCCCAAGCCTGACCTTTTCCTGCCTCCCTGTCTGGGGGACAATCCCTGGGCCTGATTaGTGCGATCAGAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: EDLQFPSLTFSCLPVWGTIPGPD*CDQRRN
Trigger: ATTTCTTCTCTGATCGCATCAATCAGGCCCAGGGAT...TGTCCCCCAGACAGGGAGGCAGGAAAAGGTCAGGCTTGGGAACTGGAGATCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR TCA 90 bp GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGGCAAATCCCTGGGCCTaGTTGATGCGATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: AVPKADLRHQTGHSTGEEANPWA*LMRSEK
Trigger: CTTCTCTGATCGCATCAATCAGGCCCAGGGATTTGC...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR GCA 90 bp GGAAGGTCTTGCTGCTATGAAGGTGGCGGGGATGGCAGCTCCCTCGCTGGATCTAATCTTTGCGACAACTaGTGTGACTGTGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: GRSCCYEGGGDGSSLAGSNLCDN*CDCEDE
Trigger: CTCATCCTCACAGTCACAGCAGTTGTCGCAAAGATT...AGATCCAGCGAGGGAGCTGCCATCCCCGCCACCTTCATAGCAGCAAGACCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp CACTATACCTCCCCACCACCCAAGAGTCTTCTGGAGTCAGGTCCAGCTGTGTCCAGGTTTCCAGGCATCTaGCAGGCAGGAATTTCACAG +
Preference number: 4 (lower is better)
Translates to: HYTSPPPKSLLESGPAVSRFPGI*QAGISQ
Trigger: CTGTGAAATTCCTGCCTGCCAGATGCCTGGAAACCT...GGACACAGCTGGACCTGACTCCAGAAGACTCTTGGGTGGTGGGGAGGTATAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp ACTTTTGAAAGGAAGGCTCAGGAGGCCATCAGCAAGCAGAGTCCCGGTTCCCTGGCCCGTGAGAGGAGGTaGGTTTCCATGATCCTTGTA +
Preference number: 4 (lower is better)
Translates to: TFERKAQEAISKQSPGSLARERR*VSMILV
Trigger: TACAAGGATCATGGAAACCCACCTCCTCTCACGGGC...CAGGGAACCGGGACTCTGCTTGCTGATGGCCTCCTGAGCCTTCCTTTCAAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
CDS-3UTR CCA 90 bp CCCACATTTAGAGAAGTCCAGAGCTCTGTTCTCCTTGCTCACTTTAGGCAGCCGCTCCTGGAACCCGGATaGTCCAGTAGCAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: PTFREVQSSVLLAHFRQPLLEPG*SSSRLC
Trigger: GCAGAGTCTGCTACTGGACCATCCGGGTTCCAGGAG...CGGCTGCCTAAAGTGAGCAAGGAGAACAGAGCTCTGGACTTCTCTAAATGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp GGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGAGGCGGTTCCTCCTTGGTaGCTTGGTACAACACAGCAA +
Preference number: 4 (lower is better)
Translates to: GQDSCTRQSFDLQELLAEAVPPW*LGTTQQ
Trigger: TTGCTGTGTTGTACCAAGCCACCAAGGAGGAACCGC...CTCAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CAA 72 bp CTGCCATGTTCCCTAGAGAGGCTACGCTCTCCTCCCTaGTCCCTAGCTGATAGTGCAATTTGGGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LPCSLERLRSPP*SLADSAIWEGC
Trigger: ACAGCCTTCCCAAATTGCACTATCAGCTAGGGACAAGGGAGGAGAGCGTAGCCTCTCTAGGGAACATGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
CDS-3UTR TCA 90 bp CTGGGTGATTTACAGCCCTTCCTTCCCACTGTCCTCTGCTGTTGTTGGAGGTGGCCATCCCAGCAAACTTaGATCTCTGACTCCGACAGA +
Preference number: 4 (lower is better)
Translates to: LGDLQPFLPTVLCCCWRWPSQQT*ISDSDR
Trigger: TCTGTCGGAGTCAGAGATTCAAGTTTGCTGGGATGG...CCACCTCCAACAACAGCAGAGGACAGTGGGAAGGAAGGGCTGTAAATCACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR TCA 90 bp CCACTCTTAGTGGGGAACCAGGCCAGCCTAGAAAACCTGACAGTTCTTTCAGTCAATCCAGAGAGACATTaGAAGACAGAGGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PLLVGNQASLENLTVLSVNPERH*KTEAGG
Trigger: GCCGCCCGCCTCTGTCTTTCAATGTCTCTCTGGATT...GACTGAAAGAACTGTCAGGTTTTCTAGGCTGGCCTGGTTCCCCACTAAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR GCA 90 bp GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGAGCGTGTTGTACGGATaGTGGAAAGTCTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: AVPKADLRHQTGHSTGEESVLYG*WKVSFQ
Trigger: CTGGAACGAGACTTTCCAGCATCCGTACAACACGCT...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp ACTTTTGAAAGGAAGGCTCAGGAGGCCATCAGCAAGCAGAGTCCCGGTTCCCTGAGGTTTCCAGGCATCTaGCAGGCAGGAATTTCACAG +
Preference number: 4 (lower is better)
Translates to: TFERKAQEAISKQSPGSLRFPGI*QAGISQ
Trigger: CTGTGAAATTCCTGCCTGCCAGATGCCTGGAAACCT...CAGGGAACCGGGACTCTGCTTGCTGATGGCCTCCTGAGCCTTCCTTTCAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
CDS-3UTR CCA 90 bp CCACTCTTAGTGGGGAACCAGGCCAGCCTAGAAAACCTGACAGTTCTTTCAGTCGCCCGTGAGAGGAGGTaGGTTTCCATGATCCTTGTA +
Preference number: 4 (lower is better)
Translates to: PLLVGNQASLENLTVLSVARERR*VSMILV
Trigger: TACAAGGATCATGGAAACCCACCTCCTCTCACGGGC...GACTGAAAGAACTGTCAGGTTTTCTAGGCTGGCCTGGTTCCCCACTAAGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp TGCCCGCATGCTATGGTGCAGTCTTTTTCTCTCCCACCTTCTGATAGTGCTGGGTCCTCCTTGGTGGCTTaGTACAACACAGCAAATCCC +
Preference number: 4 (lower is better)
Translates to: CPHAMVQSFSLPPSDSAGSSLVA*YNTANP
Trigger: GGGATTTGCTGTGTTGTACCAAGCCACCAAGGAGGA...CCCAGCACTATCAGAAGGTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR GCA 90 bp TTACCAGCACAAAGGCCCTCTGTGACTGGCTGCCTACAGGTTCTAACAGACTGTTGTTCCCCTGTAATCTaGACCGTTGGCTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LPAQRPSVTGCLQVLTDCCSPVI*TVGCEA
Trigger: TGCTTCACAGCCAACGGTGCAGATTACAGGGGAACA...ACAGTCTGTTAGAACCTGTAGGCAGCCAGTCACAGAGGGCCTTTGTGCTGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp CAGGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGGCTCACGTCTCCATCTaGATTTCTGCAATAATTGTG +
Preference number: 4 (lower is better)
Translates to: QARTAVPARALIFKSFWLAHVSI*ISAIIV
Trigger: CACAATTATTGCAGAAATCCAGATGGAGACGTGAGC...CAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CCA 90 bp AAGTCTAGTATCCAGGAAGTTCACTGTGTCTGTTCCATGGACAAACAGATGGACACCTCTGCCAGGGTCTaGTTGACAGCAGGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KSSIQEVHCVCSMDKQMDTSARV*LTAGLS
Trigger: GGAGAGACCTGCTGTCAACCAGACCCTGGCAGAGGT...GTCCATCTGTTTGTCCATGGAACAGACACAGTGAACTTCCTGGATACTAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CAA 72 bp GACACCTCAGGTATTGTTCTTCAGGACTTGTCAACCTaGTTTCTTGAGACAGGGGCTTGCCTGTCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: DTSGIVLQDLST*FLETGACLSVG
Trigger: GCCTACTGACAGGCAAGCCCCTGTCTCAAGAAACAAGGTTGACAAGTCCTGAAGAACAATACCTGAGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
CDS-3UTR TCA 90 bp CTTAGCACAAACAAGAACAGTATTTGGGAAGCTTCCGGTCAGAACAAGGGCTCTGAAGCAGGCATAGCCTaGCTCCATCCCAGCAAACTT +
Preference number: 4 (lower is better)
Translates to: LSTNKNSIWEASGQNKGSEAGIA*LHPSKL
Trigger: AAGTTTGCTGGGATGGAGTCAGGCTATGCCTGCTTC...AGAGCCCTTGTTCTGACCGGAAGCTTCCCAAATACTGTTCTTGTTTGTGCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
3UTR CAA 72 bp TGTTCCATGGACAAACAGATGGACCAATCCTCAGGCTaGCCCCATTGGTCAGTGGGTACTAAAAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: CSMDKQMDQSSG*PHWSVGTKKNP
Trigger: AGGGTTCTTTTTAGTACCCACTGACCAATGGGGCAAGCCTGAGGATTGGTCCATCTGTTTGTCCATGGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR TCA 90 bp AAAGCAAACTGGAAGAAGATGTCACAGAGAAGGACCACTTTGGACTGGGACAAATTTTACTGGTGCCCGTaGGAGGAGGTGGGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: KANWKKMSQRRTTLDWDKFYWCP*EEVGFH
Trigger: ATGGAAACCCACCTCCTCTCACGGGCACCAGTAAAA...TTTGTCCCAGTCCAAAGTGGTCCTTCTCTGTGACATCTTCTTCCAGTTTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
CDS-3UTR CCA 90 bp CAGGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGAAGGTTCATAGAAAATaGTCCAGATATCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: QARTAVPARALIFKSFWLKVHRK*SRYLQK
Trigger: CTTCTGGAGATATCTGGACCATTTTCTATGAACCTT...CAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR GCA 90 bp GCGGTACCCAAAGCAGACCTCAGACATCAAACAGGACACTCCACAGGAGAGGAGGATTTAAATGTGACATaGAGAAGAATCTTTGCGACA +
Preference number: 4 (lower is better)
Translates to: AVPKADLRHQTGHSTGEEDLNVT*RRIFAT
Trigger: TGTCGCAAAGATTCTTCTGCATGTCACATTTAAATC...CTCCTCTCCTGTGGAGTGTCCTGTTTGATGTCTGAGGTCTGCTTTGGGTACCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR GCA 90 bp AAGTCTAGTATCCAGGAAGTTCACTGTGTCTGTTCCATGGACAAACAGATGGACCACTCACGAGGGGATTaGGGTCATCTTGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: KSSIQEVHCVCSMDKQMDHSRGD*GHLVDS
Trigger: AGAGTCAACAAGATGACCGCAATCCCCTCGTGAGTG...GTCCATCTGTTTGTCCATGGAACAGACACAGTGAACTTCCTGGATACTAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR GCA 90 bp ATGTGGACAAAACAGAGAAGAAGCAAGAAAACTCATCCTACACTATACCTCCCCCTCCATCTGGATTTCTaGAATAATTGTGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: MWTKQRRSKKTHPTLYLPLHLDF*NNCARP
Trigger: TGGGCGAGCACAATTATTGCAGAAATCCAGATGGAG...GGGGAGGTATAGTGTAGGATGAGTTTTCTTGCTTCTTCTCTGTTTTGTCCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
3UTR CAA 72 bp CCTAGAAAACCTGACAGTTCTTTCAGTCTGGCTCTATaGCAAACTGTAAAGACAGGGGAAACCGATCTGTAT +
Preference number: 4 (lower is better)
Translates to: PRKPDSSFSLAL*QTVKTGETDLY
Trigger: ATACAGATCGGTTTCCCCTGTCTTTACAGTTTGCAATAGAGCCAGACTGAAAGAACTGTCAGGTTTTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CAA 90 bp GTGTTGGGCTGTGCCAGGCCCACAGCAAAAGGAGCGTGGGCACATCCACCGCCCGCGCTGACACTGAGGTaGGCTTGCTCGGTGATCACC +
Preference number: 5 (lower is better)
Translates to: VLGCARPTAKGAWAHPPPALTLR*ACSVIT
Trigger: GGTGATCACCGAGCAAGCCAACCTCAGTGTCAGCGC...GGGCGGTGGATGTGCCCACGCTCCTTTTGCTGTGGGCCTGGCACAGCCCAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS TCA 90 bp GCCGTACACAGTCCATCCTTCCACTCTGTGGCTGTTGGCCCCAACTaGCGGTGCCCAGGAATGGCTACCTGGGGCAGTCTGCGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: AVHSPSFHSVAVGPN*RCPGMATWGSLRRV
Trigger: CACCCTCCGCAGACTGCCCCAGGTAGCCATTCCTGGGCACCGTCAGTTGGGGCCAACAGCCACAGAGTGGAAGGATGGACTGTGTACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS GCA 90 bp CGCAGGGCTGCGTGTGGTCCCCGAAGCAGACACTATTGCACTCGGTaGTGGCCGCCTCCCCGTGCTTCCAGTAGTCAGGATTGTTCCCAC +
Preference number: 5 (lower is better)
Translates to: RRAACGPRSRHYCTR*WPPPRASSSQDCSH
Trigger: GTGGGAACAATCCTGACTACTGGAAGCACGGGGAGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020662.15
ENSMUST00000151978.2
CDS CCA 90 bp GTGTCAAAGAGGATAATCCTGCCGTCCCCACCGCAGGGCTGCGTGTaGTCCCCGAAGCAGACACTATTGCACTCGGTGCTGGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: VSKRIILPSPPQGCV*SPKQTLLHSVLAAS
Trigger: GGAGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCGGTGGGGACGGCAGGATTATCCTCTTTGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020662.15
ENSMUST00000151978.2
CDS GCA 90 bp GGATGCGAGAGGCTCCTGGAACCCGGATGGTCCAGTAGCAGACTCTaGCAGTGGCGTAGGTGTCAGGGAAGTCAGGGGAGTACACCACGG +
Preference number: 5 (lower is better)
Translates to: GCERLLEPGWSSSRL*QWRRCQGSQGSTPR
Trigger: CCGTGGTGTACTCCCCTGACTTCCCTGACACCTACGCCACTGGCAGAGTCTGCTACTGGACCATCCGGGTTCCAGGAGCCTCTCGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 90 bp GAGAGGCTCCTGGAACCCGGATGGTCCAGTAGCAGACTCTGCCAGTaGCGTAGGTGTCAGGGAAGTCAGGGGAGTACACCACGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: ERLLEPGWSSSRLCQ*RRCQGSQGSTPRLP
Trigger: TGGCAGCCGTGGTGTACTCCCCTGACTTCCCTGACACCTACGCCACTGGCAGAGTCTGCTACTGGACCATCCGGGTTCCAGGAGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS GCA 90 bp ACGAGAGTGTCAAAGAGGATAATCCTGCCGTCCCCACCGCAGGGCTaGGTGTGGTCCCCGAAGCAGACACTATTGCACTCGGTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: TRVSKRIILPSPPQG*VWSPKQTLLHSVLA
Trigger: GGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCGGTGGGGACGGCAGGATTATCCTCTTTGACACTCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 90 bp AGGGCTGCGTGTGGTCCCCGAAGCAGACACTATTGCACTCGGTGCTaGCCGCCTCCCCGTGCTTCCAGTAGTCAGGATTGTTCCCACAGA +
Preference number: 5 (lower is better)
Translates to: RAACGPRSRHYCTRC*PPPRASSSQDCSHR
Trigger: TCTGTGGGAACAATCCTGACTACTGGAAGCACGGGGAGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACACGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020662.15
ENSMUST00000151978.2
CDS CCA 90 bp TGGCGTAGGTGTCAGGGAAGTCAGGGGAGTACACCACGGCTGCCATaGCTGAGTAGTTCCCACCGCAGGCGCCCACGAGAGTGTCAAAGA +
Preference number: 5 (lower is better)
Translates to: WRRCQGSQGSTPRLP*LSSSHRRRPRECQR
Trigger: TCTTTGACACTCTCGTGGGCGCCTGCGGTGGGAACTACTCAGCCATGGCAGCCGTGGTGTACTCCCCTGACTTCCCTGACACCTACGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS TCA 90 bp GTAGGTGTCAGGGAAGTCAGGGGAGTACACCACGGCTGCCATGGCTaGGTAGTTCCCACCGCAGGCGCCCACGAGAGTGTCAAAGAGGAT +
Preference number: 5 (lower is better)
Translates to: VGVREVRGVHHGCHG*VVPTAGAHESVKED
Trigger: ATCCTCTTTGACACTCTCGTGGGCGCCTGCGGTGGGAACTACTCAGCCATGGCAGCCGTGGTGTACTCCCCTGACTTCCCTGACACCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 90 bp CTGACACTGAGGTTGGCTTGCTCGGTGATCACCTCTGCCAGGGTCTaGTTGACAGCAGGTCTCTCCTGTGGCGGTTCCTCCTTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: LTLRLACSVITSARV*LTAGLSCGGSSLVA
Trigger: AGCCACCAAGGAGGAACCGCCACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAGAGGTGATCACCGAGCAAGCCAACCTCAGTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CAA 90 bp GGAGAGCAGAGGCTCAAGGGCTGGCAGGAGAGTGACCAAGGTCTACCTTCAGGGTCTGCCAGGGTCTGGTaGACAGCAGGTCTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: GEQRLKGWQESDQGLPSGSARVW*TAGLSC
Trigger: ACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAGA...CCCTGAAGGTAGACCTTGGTCACTCTCCTGCCAGCCCTTGAGCCTCTGCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CAA 90 bp TGCCCGCATGCTATGGTGCAGTCTTTTTCTCTCCCACCTTCTGATAGTGCTGGGCCGAAGCAGACACTATaGCACTCGGTGCTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: CPHAMVQSFSLPPSDSAGPKQTL*HSVLAA
Trigger: GGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGG...CCCAGCACTATCAGAAGGTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS GCA 90 bp CCCAGTCCTCCTTCCCCGTTGGGGTACTTCAGCGTGTTGTACGGATaGTGGAAAGTCTCGTTCCAGAACAGACATGGCTTCCCACCTTGC +
Preference number: 5 (lower is better)
Translates to: PSPPSPLGYFSVLYG*WKVSFQNRHGFPPC
Trigger: GCAAGGTGGGAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGAAGGAGGACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS GCA 90 bp GACCAGGACGCGGTGGGTGTAGCCGTCCAGCAGCTCCACCATGTCTaGAGAGTCCCTGATATCAAACAGGGTGAAGTTGAAATGGATGCG +
Preference number: 5 (lower is better)
Translates to: DQDAVGVAVQQLHHV*RVPDIKQGEVEMDA
Trigger: CGCATCCATTTCAACTTCACCCTGTTTGATATCAGGGACTCTGCAGACATGGTGGAGCTGCTGGACGGCTACACCCACCGCGTCCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CAA 90 bp TGCCCGCATGCTATGGTGCAGTCTTTTTCTCTCCCACCTTCTGATAGTGCTGGGACATGGCTTCCCACCTaGCAGCGCTGTCCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: CPHAMVQSFSLPPSDSAGTWLPT*QRCPAL
Trigger: CAGAGCTGGACAGCGCTGCAAGGTGGGAAGCCATGT...CCCAGCACTATCAGAAGGTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CAA 90 bp AGACAGTCCTGGGGAGCAGCAGCTAGAGGAGAGGCCTCAATGGCAGTGACTGAGGGGATTGCGGTCATCTaGTTGACTCTGACCCTTGAG +
Preference number: 5 (lower is better)
Translates to: RQSWGAAARGEASMAVTEGIAVI*LTLTLE
Trigger: CTCAAGGGTCAGAGTCAACAAGATGACCGCAATCCC...CTCAGTCACTGCCATTGAGGCCTCTCCTCTAGCTGCTGCTCCCCAGGACTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 90 bp CAGCGTGTTGTACGGATGCTGGAAAGTCTCGTTCCAGAACAGACATaGCTTCCCACCTTGCAGCGCTGTCCAGCTCTGTGTTCCCCTGTA +
Preference number: 5 (lower is better)
Translates to: QRVVRMLESLVPEQT*LPTLQRCPALCSPV
Trigger: TACAGGGGAACACAGAGCTGGACAGCGCTGCAAGGTGGGAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCGTACAACACGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 90 bp AGTCCTCCTTCCCCGTTGGGGTACTTCAGCGTGTTGTACGGATGCTaGAAAGTCTCGTTCCAGAACAGACATGGCTTCCCACCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: SPPSPLGYFSVLYGC*KVSFQNRHGFPPCS
Trigger: GCTGCAAGGTGGGAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGAAGGAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 90 bp CCTGATATCAAACAGGGTGAAGTTGAAATGGATGCGAGAGGCTCCTaGAACCCGGATGGTCCAGTAGCAGACTCTGCCAGTGGCGTAGGT +
Preference number: 5 (lower is better)
Translates to: PDIKQGEVEMDARGS*NPDGPVADSASGVG
Trigger: ACCTACGCCACTGGCAGAGTCTGCTACTGGACCATCCGGGTTCCAGGAGCCTCTCGCATCCATTTCAACTTCACCCTGTTTGATATCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CAA 90 bp TTCAGCACTCAGGGGACCGAGGCAGGCAGGTCTCTGAGTTCAGGCCAGCCTGGTGTTTGTATGGTGAGCTaGTTAGAGGTTTTACTGGTG +
Preference number: 5 (lower is better)
Translates to: FSTQGTEAGRSLSSGQPGVCMVS*LEVLLV
Trigger: CACCAGTAAAACCTCTAACAAGCTCACCATACAAAC...ACCAGGCTGGCCTGAACTCAGAGACCTGCCTGCCTCGGTCCCCTGAGTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000151978.2
CDS-3UTR CAA 90 bp GAGGATCTCCAGTTCCCAAGCCTGACCTTTTCCTGCCTCCCTGTCTGGGGGACAATTGCGGTCATCTTGTaGACTCTGACCCTTGAGCTT +
Preference number: 5 (lower is better)
Translates to: EDLQFPSLTFSCLPVWGTIAVIL*TLTLEL
Trigger: AAGCTCAAGGGTCAGAGTCAACAAGATGACCGCAAT...TGTCCCCCAGACAGGGAGGCAGGAAAAGGTCAGGCTTGGGAACTGGAGATCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 90 bp CTGGATTTCTGCAATAATTGTGCTCGCCCAGTCCTCCTTCCCCGTTaGGGTACTTCAGCGTGTTGTACGGATGCTGGAAAGTCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: LDFCNNCARPVLLPR*GTSACCTDAGKSRS
Trigger: GGAACGAGACTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGAAGGAGGACTGGGCGAGCACAATTATTGCAGAAATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CAA 90 bp TGCCCGCATGCTATGGTGCAGTCTTTTTCTCTCCCACCTTCTGATAGTGCTGGGGGGTACTTCAGCGTGTaGTACGGATGCTGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: CPHAMVQSFSLPPSDSAGGYFSV*YGCWKV
Trigger: GACTTTCCAGCATCCGTACAACACGCTGAAGTACCC...CCCAGCACTATCAGAAGGTGGGAGAGAAAAAGACTGCACCATAGCATGCGGGCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CAA 90 bp CAGGCCAGGACAGCTGTACCCGCCAGAGCTTTGATCTTCAAGAGCTTTTGGCTGTCAAACAGGGTGAAGTaGAAATGGATGCGAGAGGCT +
Preference number: 5 (lower is better)
Translates to: QARTAVPARALIFKSFWLSNRVK*KWMREA
Trigger: AGCCTCTCGCATCCATTTCAACTTCACCCTGTTTGA...CAGCCAAAAGCTCTTGAAGATCAAAGCTCTGGCGGGTACAGCTGTCCTGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CAA 90 bp CCCACATTTAGAGAAGTCCAGAGCTCTGTTCTCCTTGCTCACTTTAGGCAGCCGAAATCCAGAGAGACATaGAAAGACAGAGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: PTFREVQSSVLLAHFRQPKSRET*KDRGGR
Trigger: CCGCCCGCCTCTGTCTTTCAATGTCTCTCTGGATTT...CGGCTGCCTAAAGTGAGCAAGGAGAACAGAGCTCTGGACTTCTCTAAATGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS TCA 90 bp GTGCTTCCAGTAGTCAGGATTGTTCCCACAGAAGCAGGCATAGCCTaGCTCCATCCCAGCAAACTTGAATCTCTGACTCCGACAGAAGCT +
Preference number: 5 (lower is better)
Translates to: VLPVVRIVPTEAGIA*LHPSKLESLTPTEA
Trigger: AGCTTCTGTCGGAGTCAGAGATTCAAGTTTGCTGGGATGGAGTCAGGCTATGCCTGCTTCTGTGGGAACAATCCTGACTACTGGAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020662.15
ENSMUST00000151978.2
CDS GCA 90 bp TGCAGGGACTCGATGAGATTTAAATGTGACATGCAGAAGAATCTTTaGGACAACTGCTGTGACTGTGAGGATGAGGAGGGTCGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: CRDSMRFKCDMQKNL*DNCCDCEDEEGRQA
Trigger: GGCCTGGCGACCCTCCTCATCCTCACAGTCACAGCAGTTGTCGCAAAGATTCTTCTGCATGTCACATTTAAATCTCATCGAGTCCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 90 bp TATGGTGAGCTTGTTAGAGGTTTTACTGGTGCCCGTGAGAGGAGGTaGGTTTCCATGATCCTTGTAGCAGCCAAGGTTTCCAGGCATCTG +
Preference number: 5 (lower is better)
Translates to: YGELVRGFTGARERR*VSMILVAAKVSRHL
Trigger: CAGATGCCTGGAAACCTTGGCTGCTACAAGGATCATGGAAACCCACCTCCTCTCACGGGCACCAGTAAAACCTCTAACAAGCTCACCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020662.15
ENSMUST00000151978.2
CDS-3UTR CAA 90 bp GACTCTGGTGTCCTCTGGTTGACTCATCAGCTCAGGTCACTGCCTCGTCAGTACGTTTGTATGGTGAGCTaGTTAGAGGTTTTACTGGTG +
Preference number: 5 (lower is better)
Translates to: DSGVLWLTHQLRSLPRQYVCMVS*LEVLLV
Trigger: CACCAGTAAAACCTCTAACAAGCTCACCATACAAAC...GTACTGACGAGGCAGTGACCTGAGCTGATGAGTCAACCAGAGGACACCAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS-3UTR CAA 90 bp AAGTCTAGTATCCAGGAAGTTCACTGTGTCTGTTCCATGGACAAACAGATGGACGACACTGAGGTTGGCTaGCTCGGTGATCACCTCTGC +
Preference number: 5 (lower is better)
Translates to: KSSIQEVHCVCSMDKQMDDTEVG*LGDHLC
Trigger: GCAGAGGTGATCACCGAGCAAGCCAACCTCAGTGTC...GTCCATCTGTTTGTCCATGGAACAGACACAGTGAACTTCCTGGATACTAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS TCA 90 bp GATATCTCCAGAAGCCCCAGGCTGACGACAGTCCCTAAGGTCTCCTaGTGCAGGGACTCGATGAGATTTAAATGTGACATGCAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: DISRSPRLTTVPKVS*CRDSMRFKCDMQKN
Trigger: ATTCTTCTGCATGTCACATTTAAATCTCATCGAGTCCCTGCATCAGGAGACCTTAGGGACTGTCGTCAGCCTGGGGCTTCTGGAGATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS GCA 90 bp TCGATGAGATTTAAATGTGACATGCAGAAGAATCTTTGCGACAACTaGTGTGACTGTGAGGATGAGGAGGGTCGCCAGGCCGTACACAGT +
Preference number: 5 (lower is better)
Translates to: SMRFKCDMQKNLCDN*CDCEDEEGRQAVHS
Trigger: ACTGTGTACGGCCTGGCGACCCTCCTCATCCTCACAGTCACAGCAGTTGTCGCAAAGATTCTTCTGCATGTCACATTTAAATCTCATCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS TCA 90 bp GGTTCCTCCTTGGTGGCTTGGTACAACACAGCAAATCCCTGGGCCTaGTTGATGCGATCAGAGAAGAAATACAAAATGACAAAATCCAGA +
Preference number: 5 (lower is better)
Translates to: GSSLVAWYNTANPWA*LMRSEKKYKMTKSR
Trigger: TCTGGATTTTGTCATTTTGTATTTCTTCTCTGATCGCATCAATCAGGCCCAGGGATTTGCTGTGTTGTACCAAGCCACCAAGGAGGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 72 bp CTGTGGCTGTTGGCCCCAACTGACGGTGCCCAGGAATaGCTACCTGGGGCAGTCTGCGGAGGGTGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LWLLAPTDGAQE*LPGAVCGGWLG
Trigger: CCCCAGCCACCCTCCGCAGACTGCCCCAGGTAGCCATTCCTGGGCACCGTCAGTTGGGGCCAACAGCCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CAA 72 bp CCGCAGGGCTGCGTGTGGTCCCCGAAGCAGACACTATaGCACTCGGTGCTGGCCGCCTCCCCGTGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: PQGCVWSPKQTL*HSVLAASPCFQ
Trigger: CTGGAAGCACGGGGAGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020662.15
ENSMUST00000151978.2
CDS GCA 72 bp CGCAGGGCTGCGTGTGGTCCCCGAAGCAGACACTATTaGACTCGGTGCTGGCCGCCTCCCCGTGCTTCCAGT +
Preference number: 6 (lower is better)
Translates to: RRAACGPRSRHY*TRCWPPPRASS
Trigger: ACTGGAAGCACGGGGAGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020662.15
ENSMUST00000151978.2
CDS TCA 72 bp AGGGAAGTCAGGGGAGTACACCACGGCTGCCATGGCTaGGTAGTTCCCACCGCAGGCGCCCACGAGAGTGTC +
Preference number: 6 (lower is better)
Translates to: REVRGVHHGCHG*VVPTAGAHESV
Trigger: GACACTCTCGTGGGCGCCTGCGGTGGGAACTACTCAGCCATGGCAGCCGTGGTGTACTCCCCTGACTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 72 bp TGTCAGGGAAGTCAGGGGAGTACACCACGGCTGCCATaGCTGAGTAGTTCCCACCGCAGGCGCCCACGAGAG +
Preference number: 6 (lower is better)
Translates to: CQGSQGSTPRLP*LSSSHRRRPRE
Trigger: CTCTCGTGGGCGCCTGCGGTGGGAACTACTCAGCCATGGCAGCCGTGGTGTACTCCCCTGACTTCCCTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CAA 90 bp AGGGTCGCCAGGCCGTACACAGTCCATCCTTCCACTCTGTGGCTGTaGGCCCCAACTGACGGTGCCCAGGAATGGCTACCTGGGGCAGTC +
Preference number: 6 (lower is better)
Translates to: RVARPYTVHPSTLWL*APTDGAQEWLPGAV
Trigger: GACTGCCCCAGGTAGCCATTCCTGGGCACCGTCAGTTGGGGCCAACAGCCACAGAGTGGAAGGATGGACTGTGTACGGCCTGGCGACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS GCA 72 bp GCGTGTGGTCCCCGAAGCAGACACTATTGCACTCGGTaGTGGCCGCCTCCCCGTGCTTCCAGTAGTCAGGAT +
Preference number: 6 (lower is better)
Translates to: ACGPRSRHYCTR*WPPPRASSSQD
Trigger: ATCCTGACTACTGGAAGCACGGGGAGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020662.15
ENSMUST00000151978.2
CDS CCA 72 bp GTCGCCAGGCCGTACACAGTCCATCCTTCCACTCTGTaGCTGTTGGCCCCAACTGACGGTGCCCAGGAATGG +
Preference number: 6 (lower is better)
Translates to: VARPYTVHPSTL*LLAPTDGAQEW
Trigger: CCATTCCTGGGCACCGTCAGTTGGGGCCAACAGCCACAGAGTGGAAGGATGGACTGTGTACGGCCTGGCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS GCA 72 bp AGGCTCCTGGAACCCGGATGGTCCAGTAGCAGACTCTaGCAGTGGCGTAGGTGTCAGGGAAGTCAGGGGAGT +
Preference number: 6 (lower is better)
Translates to: RLLEPGWSSSRL*QWRRCQGSQGS
Trigger: ACTCCCCTGACTTCCCTGACACCTACGCCACTGGCAGAGTCTGCTACTGGACCATCCGGGTTCCAGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 72 bp AGGTTGGCTTGCTCGGTGATCACCTCTGCCAGGGTCTaGTTGACAGCAGGTCTCTCCTGTGGCGGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: RLACSVITSARV*LTAGLSCGGSS
Trigger: GGAGGAACCGCCACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAGAGGTGATCACCGAGCAAGCCAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CAA 90 bp ACACTGAGGTTGGCTTGCTCGGTGATCACCTCTGCCAGGGTCTGGTaGACAGCAGGTCTCTCCTGTGGCGGTTCCTCCTTGGTGGCTTGG +
Preference number: 6 (lower is better)
Translates to: TLRLACSVITSARVW*TAGLSCGGSSLVAW
Trigger: CCAAGCCACCAAGGAGGAACCGCCACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAGAGGTGATCACCGAGCAAGCCAACCTCAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS GCA 72 bp TCAAAGAGGATAATCCTGCCGTCCCCACCGCAGGGCTaGGTGTGGTCCCCGAAGCAGACACTATTGCACTCG +
Preference number: 6 (lower is better)
Translates to: SKRIILPSPPQG*VWSPKQTLLHS
Trigger: CGAGTGCAATAGTGTCTGCTTCGGGGACCACACGCAGCCCTGCGGTGGGGACGGCAGGATTATCCTCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020662.15
ENSMUST00000151978.2
CDS GCA 72 bp GCTGACACTGAGGTTGGCTTGCTCGGTGATCACCTCTaGCAGGGTCTGGTTGACAGCAGGTCTCTCCTGTGG +
Preference number: 6 (lower is better)
Translates to: ADTEVGLLGDHL*QGLVDSRSLLW
Trigger: CCACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAGAGGTGATCACCGAGCAAGCCAACCTCAGTGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 72 bp TGTGGTCCCCGAAGCAGACACTATTGCACTCGGTGCTaGCCGCCTCCCCGTGCTTCCAGTAGTCAGGATTGT +
Preference number: 6 (lower is better)
Translates to: CGPRSRHYCTRC*PPPRASSSQDC
Trigger: ACAATCCTGACTACTGGAAGCACGGGGAGGCGGCCAGCACCGAGTGCAATAGTGTCTGCTTCGGGGACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000020662.15
ENSMUST00000151978.2
CDS CCA 72 bp CTCTGCCAGGGTCTGGTTGACAGCAGGTCTCTCCTGTaGCGGTTCCTCCTTGGTGGCTTGGTACAACACAGC +
Preference number: 6 (lower is better)
Translates to: LCQGLVDSRSLL*RFLLGGLVQHS
Trigger: GCTGTGTTGTACCAAGCCACCAAGGAGGAACCGCCACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CAA 72 bp TTGGCTTGCTCGGTGATCACCTCTGCCAGGGTCTGGTaGACAGCAGGTCTCTCCTGTGGCGGTTCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: LACSVITSARVW*TAGLSCGGSSL
Trigger: CAAGGAGGAACCGCCACAGGAGAGACCTGCTGTCAACCAGACCCTGGCAGAGGTGATCACCGAGCAAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CAA 72 bp AGGCCGTACACAGTCCATCCTTCCACTCTGTGGCTGTaGGCCCCAACTGACGGTGCCCAGGAATGGCTACCT +
Preference number: 6 (lower is better)
Translates to: RPYTVHPSTLWL*APTDGAQEWLP
Trigger: AGGTAGCCATTCCTGGGCACCGTCAGTTGGGGCCAACAGCCACAGAGTGGAAGGATGGACTGTGTACGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CAA 90 bp CGGATGCTGGAAAGTCTCGTTCCAGAACAGACATGGCTTCCCACCTaGCAGCGCTGTCCAGCTCTGTGTTCCCCTGTAATCTGCACCGTT +
Preference number: 6 (lower is better)
Translates to: RMLESLVPEQTWLPT*QRCPALCSPVICTV
Trigger: AACGGTGCAGATTACAGGGGAACACAGAGCTGGACAGCGCTGCAAGGTGGGAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CAA 90 bp TTGTGCTCGCCCAGTCCTCCTTCCCCGTTGGGGTACTTCAGCGTGTaGTACGGATGCTGGAAAGTCTCGTTCCAGAACAGACATGGCTTC +
Preference number: 6 (lower is better)
Translates to: LCSPSPPSPLGYFSV*YGCWKVSFQNRHGF
Trigger: GAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGAAGGAGGACTGGGCGAGCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS GCA 72 bp CGTAGCACCAAGGGCTCACGTCTCCATCTGGATTTCTaGAATAATTGTGCTCGCCCAGTCCTCCTTCCCCGT +
Preference number: 6 (lower is better)
Translates to: RSTKGSRLHLDF*NNCARPVLLPR
Trigger: ACGGGGAAGGAGGACTGGGCGAGCACAATTATTGCAGAAATCCAGATGGAGACGTGAGCCCTTGGTGCTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS GCA 72 bp GCGGTGGGTGTAGCCGTCCAGCAGCTCCACCATGTCTaGAGAGTCCCTGATATCAAACAGGGTGAAGTTGAA +
Preference number: 6 (lower is better)
Translates to: AVGVAVQQLHHV*RVPDIKQGEVE
Trigger: TTCAACTTCACCCTGTTTGATATCAGGGACTCTGCAGACATGGTGGAGCTGCTGGACGGCTACACCCACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 72 bp GTACGGATGCTGGAAAGTCTCGTTCCAGAACAGACATaGCTTCCCACCTTGCAGCGCTGTCCAGCTCTGTGT +
Preference number: 6 (lower is better)
Translates to: VRMLESLVPEQT*LPTLQRCPALC
Trigger: ACACAGAGCTGGACAGCGCTGCAAGGTGGGAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CAA 72 bp CCCAGTCCTCCTTCCCCGTTGGGGTACTTCAGCGTGTaGTACGGATGCTGGAAAGTCTCGTTCCAGAACAGA +
Preference number: 6 (lower is better)
Translates to: PSPPSPLGYFSV*YGCWKVSFQNR
Trigger: TCTGTTCTGGAACGAGACTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGAAGGAGGACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS GCA 72 bp CCTTCCCCGTTGGGGTACTTCAGCGTGTTGTACGGATaGTGGAAAGTCTCGTTCCAGAACAGACATGGCTTC +
Preference number: 6 (lower is better)
Translates to: PSPLGYFSVLYG*WKVSFQNRHGF
Trigger: GAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 72 bp TCCCCGTTGGGGTACTTCAGCGTGTTGTACGGATGCTaGAAAGTCTCGTTCCAGAACAGACATGGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: SPLGYFSVLYGC*KVSFQNRHGFP
Trigger: TGGGAAGCCATGTCTGTTCTGGAACGAGACTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 72 bp TGCAATAATTGTGCTCGCCCAGTCCTCCTTCCCCGTTaGGGTACTTCAGCGTGTTGTACGGATGCTGGAAAG +
Preference number: 6 (lower is better)
Translates to: CNNCARPVLLPR*GTSACCTDAGK
Trigger: CTTTCCAGCATCCGTACAACACGCTGAAGTACCCCAACGGGGAAGGAGGACTGGGCGAGCACAATTATTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 72 bp AAACAGGGTGAAGTTGAAATGGATGCGAGAGGCTCCTaGAACCCGGATGGTCCAGTAGCAGACTCTGCCAGT +
Preference number: 6 (lower is better)
Translates to: KQGEVEMDARGS*NPDGPVADSAS
Trigger: ACTGGCAGAGTCTGCTACTGGACCATCCGGGTTCCAGGAGCCTCTCGCATCCATTTCAACTTCACCCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 72 bp GCAGAGTCCCTGATATCAAACAGGGTGAAGTTGAAATaGATGCGAGAGGCTCCTGGAACCCGGATGGTCCAG +
Preference number: 6 (lower is better)
Translates to: AESLISNRVKLK*MREAPGTRMVQ
Trigger: CTGGACCATCCGGGTTCCAGGAGCCTCTCGCATCCATTTCAACTTCACCCTGTTTGATATCAGGGACTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CAA 90 bp ATGCGATCAGAGAAGAAATACAAAATGACAAAATCCAGAGAGACATaGAAAGACAGAGGCGGGCGGCTCCTCCCACTGAGCCGGACCAGG +
Preference number: 6 (lower is better)
Translates to: MRSEKKYKMTKSRET*KDRGGRLLPLSRTR
Trigger: CCTGGTCCGGCTCAGTGGGAGGAGCCGCCCGCCTCTGTCTTTCAATGTCTCTCTGGATTTTGTCATTTTGTATTTCTTCTCTGATCGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS TCA 72 bp GTAGTCAGGATTGTTCCCACAGAAGCAGGCATAGCCTaGCTCCATCCCAGCAAACTTGAATCTCTGACTCCG +
Preference number: 6 (lower is better)
Translates to: VVRIVPTEAGIA*LHPSKLESLTP
Trigger: CGGAGTCAGAGATTCAAGTTTGCTGGGATGGAGTCAGGCTATGCCTGCTTCTGTGGGAACAATCCTGACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000020662.15
ENSMUST00000151978.2
CDS TCA 72 bp AGAAGCCCCAGGCTGACGACAGTCCCTAAGGTCTCCTaGTGCAGGGACTCGATGAGATTTAAATGTGACATG +
Preference number: 6 (lower is better)
Translates to: RSPRLTTVPKVS*CRDSMRFKCDM
Trigger: CATGTCACATTTAAATCTCATCGAGTCCCTGCATCAGGAGACCTTAGGGACTGTCGTCAGCCTGGGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15
CDS CCA 72 bp CTTGTTAGAGGTTTTACTGGTGCCCGTGAGAGGAGGTaGGTTTCCATGATCCTTGTAGCAGCCAAGGTTTCC +
Preference number: 6 (lower is better)
Translates to: LVRGFTGARERR*VSMILVAAKVS
Trigger: GGAAACCTTGGCTGCTACAAGGATCATGGAAACCCACCTCCTCTCACGGGCACCAGTAAAACCTCTAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020662.15
ENSMUST00000151978.2
CDS CAA 90 bp CCCAGCAAACTTGAATCTCTGACTCCGACAGAAGCTGATACAGGTTaGTATGGTGAGCTTGTTAGAGGTTTTACTGGTGCCCGTGAGAGG +
Preference number: 6 (lower is better)
Translates to: PSKLESLTPTEADTG*YGELVRGFTGARER
Trigger: CCTCTCACGGGCACCAGTAAAACCTCTAACAAGCTCACCATACAAACCTGTATCAGCTTCTGTCGGAGTCAGAGATTCAAGTTTGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020662.15
ENSMUST00000151978.2
CDS CAA 72 bp CTTGAATCTCTGACTCCGACAGAAGCTGATACAGGTTaGTATGGTGAGCTTGTTAGAGGTTTTACTGGTGCC +
Preference number: 6 (lower is better)
Translates to: LESLTPTEADTG*YGELVRGFTGA
Trigger: GGCACCAGTAAAACCTCTAACAAGCTCACCATACAAACCTGTATCAGCTTCTGTCGGAGTCAGAGATTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000020662.15
ENSMUST00000151978.2
CDS TCA 72 bp TTGGTGGCTTGGTACAACACAGCAAATCCCTGGGCCTaGTTGATGCGATCAGAGAAGAAATACAAAATGACA +
Preference number: 6 (lower is better)
Translates to: LVAWYNTANPWA*LMRSEKKYKMT
Trigger: TGTCATTTTGTATTTCTTCTCTGATCGCATCAATCAGGCCCAGGGATTTGCTGTGTTGTACCAAGCCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020662.15