Pregenerated sensors for KPTN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006021Ensembl transcript IDs: ENSMUST00000006178.5
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGTAAATGGTCCTCAGGGACCAACACCTGATGGGAGCAGAGGTTaGCTGAGAACATCCCTTTTCAAATGGCTCAGACAGGAGTTATCA | + |
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Preference number: 1 (lower is better) Translates to: CVNGPQGPTPDGSRG*LRTSLFKWLRQELS Trigger: TGATAACTCCTGTCTGAGCCATTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATCAGGTGTTGGTCCCTGAGGACCATTTACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| 3UTR CCA 72 bp | GGTCCTCAGGGACCAACACCTGATGGGAGCAGAGGTTaGCTGAGAACATCCCTTTTCAAATGGCTCAGACAG | + |
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Preference number: 3 (lower is better) Translates to: GPQGPTPDGSRG*LRTSLFKWLRQ Trigger: CTGTCTGAGCCATTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATCAGGTGTTGGTCCCTGAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| 3UTR TCA 72 bp | CTCAGGGACCAACACCTGATGGGAGCAGAGGTTGGCTaGGAACATCCCTTTTCAAATGGCTCAGACAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: LRDQHLMGAEVG*EHPFSNGSDRS Trigger: ACTCCTGTCTGAGCCATTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATCAGGTGTTGGTCCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| 3UTR CCA 72 bp | GGGAGCAGAGGTTGGCTGAGAACATCCCTTTTCAAATaGCTCAGACAGGAGTTATCAGCTAGGGTCACACAG | + |
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Preference number: 3 (lower is better) Translates to: GSRGWLRTSLFK*LRQELSARVTQ Trigger: CTGTGTGACCCTAGCTGATAACTCCTGTCTGAGCCATTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR TCA 90 bp | CACACAGCACACCAGGGTGGGTCAGGGACTCTTAGAATTCCCCTTCTGAGGGAGCTAGGTCCACGTCAGTaGCCAGGCCACAGAGGACGC | + |
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Preference number: 4 (lower is better) Translates to: HTAHQGGSGTLRIPLLRELGPRQ*PGHRGR Trigger: GCGTCCTCTGTGGCCTGGTCACTGACGTGGACCTAG...CTCCCTCAGAAGGGGAATTCTAAGAGTCCCTGACCCACCCTGGTGTGCTGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR GCA 90 bp | GAATGTGTAAATGGTCCTCAGGGACCAACACCTGATGGGAGCAGAGGTTGGCTGGGCTGGCGAAGCTCCTaGGCCACAGCAGGCGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: ECVNGPQGPTPDGSRGWLGWRSS*ATAGGS Trigger: GCTTCCGCCTGCTGTGGCGCAGGAGCTTCGCCAGCC...CAGCCAACCTCTGCTCCCATCAGGTGTTGGTCCCTGAGGACCATTTACACATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CCA 90 bp | GAATGTGTAAATGGTCCTCAGGGACCAACACCTGATGGGAGCAGAGGTTGGCTGTGGCCAGCAGGGGGCTaGCGAAGCTCCTGCGCCACA | + |
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Preference number: 4 (lower is better) Translates to: ECVNGPQGPTPDGSRGWLWPAGG*RSSCAT Trigger: TGTGGCGCAGGAGCTTCGCCAGCCCCCTGCTGGCCA...CAGCCAACCTCTGCTCCCATCAGGTGTTGGTCCCTGAGGACCATTTACACATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CCA 90 bp | GGTCACACAGCACACCAGGGTGGGTCAGGGACTCTTAGAATTCCCCTTCTGAGGCCAGTACACCACAGCTaGCTCCAGCATGCTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GHTAHQGGSGTLRIPLLRPVHHS*LQHAGH Trigger: GTGGCCAGCATGCTGGAGCCAGCTGTGGTGTACTGG...CCTCAGAAGGGGAATTCTAAGAGTCCCTGACCCACCCTGGTGTGCTGTGTGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR GCA 90 bp | GAATGTGTAAATGGTCCTCAGGGACCAACACCTGATGGGAGCAGAGGTTGGCTGGCAGGCGGAAGCCTCTaGTGTCCTCTGGCAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: ECVNGPQGPTPDGSRGWLAGGSL*CPLAVH Trigger: GTGGACTGCCAGAGGACAGCAGAGGCTTCCGCCTGC...CAGCCAACCTCTGCTCCCATCAGGTGTTGGTCCCTGAGGACCATTTACACATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR GCA 90 bp | ACACCTGATGGGAGCAGAGGTTGGCTGAGAACATCCCTTTTCAAATGGCTCAGATGGACAAGGTCCCTCTaGCACGGCCGCCTCCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: TPDGSRGWLRTSLFKWLRWTRSL*HGRLPH Trigger: ATGGGGGAGGCGGCCGTGGCAGAGGGACCTTGTCCA...TCTGAGCCATTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATCAGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CCA 90 bp | GGTCACACAGCACACCAGGGTGGGTCAGGGACTCTTAGAATTCCCCTTCTGAGGAACACCGTCTCCAGCTaGTCCCCAACCTGGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: GHTAHQGGSGTLRIPLLRNTVSS*SPTWTS Trigger: AGAAGTCCAGGTTGGGGACCAGCTGGAGACGGTGTT...CCTCAGAAGGGGAATTCTAAGAGTCCCTGACCCACCCTGGTGTGCTGTGTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR TCA 90 bp | CAGCCAGGACAGCTTTGTTGCTCTGAATGTGTAAATGGTCCTCAGGGACCAACAGCGACGAGAAGCGCGTaGAGCTGTCCTCCAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: QPGQLCCSECVNGPQGPTATRSA*SCPPAV Trigger: CACTGCTGGAGGACAGCTTCACGCGCTTCTCGTCGC...TGTTGGTCCCTGAGGACCATTTACACATTCAGAGCAACAAAGCTGTCCTGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR TCA 90 bp | GGTCACACAGCACACCAGGGTGGGTCAGGGACTCTTAGAATTCCCCTTCTGAGGGGCTGCTCCTCAAACTaGTGTAGTCCCTCATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GHTAHQGGSGTLRIPLLRGCSSN*CSPSFS Trigger: GGAGAATGAGGGACTACATCAGTTTGAGGAGCAGCC...CCTCAGAAGGGGAATTCTAAGAGTCCCTGACCCACCCTGGTGTGCTGTGTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR GCA 90 bp | GAATGTGTAAATGGTCCTCAGGGACCAACACCTGATGGGAGCAGAGGTTGGCTGCAGCTGGCTCCAGCATaGTGGCCACAAGCAGACTGT | + |
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Preference number: 4 (lower is better) Translates to: ECVNGPQGPTPDGSRGWLQLAPA*WPQADC Trigger: ACAGTCTGCTTGTGGCCAGCATGCTGGAGCCAGCTG...CAGCCAACCTCTGCTCCCATCAGGTGTTGGTCCCTGAGGACCATTTACACATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CCA 90 bp | CCTCAGGGACCAACACCTGATGGGAGCAGAGGTTGGCTGAGAACATCCCTTTTCCAATCACTCGGGAGATaGGCCCATCCTGCTGGATTG | + |
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Preference number: 4 (lower is better) Translates to: PQGPTPDGSRGWLRTSLFQSLGR*AHPAGL Trigger: CAATCCAGCAGGATGGGCCCATCTCCCGAGTGATTG...GAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATCAGGTGTTGGTCCCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CCA 90 bp | GAATGTGTAAATGGTCCTCAGGGACCAACACCTGATGGGAGCAGAGGTTGGCTGGCTCCTGTCCATAGGTaGCCACCAGGACTTCCGGTT | + |
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Preference number: 4 (lower is better) Translates to: ECVNGPQGPTPDGSRGWLAPVHR*PPGLPV Trigger: AACCGGAAGTCCTGGTGGCCACCTATGGACAGGAGC...CAGCCAACCTCTGCTCCCATCAGGTGTTGGTCCCTGAGGACCATTTACACATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR TCA 90 bp | GATGGGAGCAGAGGTTGGCTGAGAACATCCCTTTTCAAATGGCTCAGACAGGAGCCGAGGCTGACAGGCTaGACACAATCACTCGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: DGSRGWLRTSLFKWLRQEPRLTG*TQSLGR Trigger: TCTCCCGAGTGATTGTGTTCAGCCTGTCAGCCTCGG...CTCCTGTCTGAGCCATTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CCA 90 bp | GATGGGAGCAGAGGTTGGCTGAGAACATCCCTTTTCAAATGGCTCAGACAGGAGCTGTATCCTTCCTGCTaGGGGCTGTCCTGTGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: DGSRGWLRTSLFKWLRQELYPSC*GLSCVA Trigger: GGCAACACAGGACAGCCCCCAGCAGGAAGGATACAG...CTCCTGTCTGAGCCATTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR TCA 90 bp | AGACAGCCAGGACAGCTTTGTTGCTCTGAATGTGTAAATGGTCCTCAGGGACCATCCCCAAGGCCCTGCTaGTGTTTCCTCTGCTCCACT | + |
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Preference number: 4 (lower is better) Translates to: RQPGQLCCSECVNGPQGPSPRPC*CFLCST Trigger: AGTGGAGCAGAGGAAACATCAGCAGGGCCTTGGGGA...TGGTCCCTGAGGACCATTTACACATTCAGAGCAACAAAGCTGTCCTGGCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR GCA 90 bp | ACACCTGATGGGAGCAGAGGTTGGCTGAGAACATCCCTTTTCAAATGGCTCAGACAAGCCCGTACACGTTaGTTTGCGACGAGAAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: TPDGSRGWLRTSLFKWLRQARTR*FATRSA Trigger: CGCGCTTCTCGTCGCAAAGCAACGTGTACGGGCTTG...TCTGAGCCATTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATCAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR GCA 90 bp | GAGCAGAGGTTGGCTGAGAACATCCCTTTTCAAATGGCTCAGACAGGAGTTATCGCCTGGATCAGGCTGTaGTGGAGGATGTGCACCCCT | + |
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Preference number: 4 (lower is better) Translates to: EQRLAENIPFQMAQTGVIAWIRL*WRMCTP Trigger: AGGGGTGCACATCCTCCAGCACAGCCTGATCCAGGC...GATAACTCCTGTCTGAGCCATTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR TCA 90 bp | CAGCCAGGACAGCTTTGTTGCTCTGAATGTGTAAATGGTCCTCAGGGACCAACATGTTGCCTCCGAGGCTaGCAGGCTGAACACAATCAC | + |
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Preference number: 4 (lower is better) Translates to: QPGQLCCSECVNGPQGPTCCLRG*QAEHNH Trigger: GTGATTGTGTTCAGCCTGTCAGCCTCGGAGGCAACA...TGTTGGTCCCTGAGGACCATTTACACATTCAGAGCAACAAAGCTGTCCTGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR GCA 90 bp | CTTTGTTGCTCTGAATGTGTAAATGGTCCTCAGGGACCAACACCTGATGGGAGCCCGTACACGTTGCTTTaGGACGAGAAGCGCGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LCCSECVNGPQGPTPDGSPYTLL*DEKRVK Trigger: CTTCACGCGCTTCTCGTCGCAAAGCAACGTGTACGG...GCTCCCATCAGGTGTTGGTCCCTGAGGACCATTTACACATTCAGAGCAACAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR GCA 90 bp | GAATGTGTAAATGGTCCTCAGGGACCAACACCTGATGGGAGCAGAGGTTGGCTGTGTCAAACTGGTCACTaGCAGGCAGGAGAAGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: ECVNGPQGPTPDGSRGWLCQTGH*QAGEVG Trigger: ACCAACTTCTCCTGCCTGGCAGTGACCAGTTTGACA...CAGCCAACCTCTGCTCCCATCAGGTGTTGGTCCCTGAGGACCATTTACACATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CCA 90 bp | GATGGGAGCAGAGGTTGGCTGAGAACATCCCTTTTCAAATGGCTCAGACAGGAGCAGGTTCGTGAGCTCTaGAAAGAGGTTTTCCACGGG | + |
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Preference number: 4 (lower is better) Translates to: DGSRGWLRTSLFKWLRQEQVREL*KEVFHG Trigger: CCCGTGGAAAACCTCTTTCCAGAGCTCACGAACCTG...CTCCTGTCTGAGCCATTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR TCA 90 bp | CAGGGACCAACACCTGATGGGAGCAGAGGTTGGCTGAGAACATCCCTTTTCAAATTGGGGGTGACTTGTTaGAAGTGTCGATGGAGACGA | + |
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Preference number: 4 (lower is better) Translates to: QGPTPDGSRGWLRTSLFKLGVTC*KCRWRR Trigger: TCGTCTCCATCGACACTTTCAACAAGTCACCCCCAA...TTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATCAGGTGTTGGTCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR TCA 90 bp | GGTCACACAGCACACCAGGGTGGGTCAGGGACTCTTAGAATTCCCCTTCTGAGGACTGCCCTTGTCTCCTaGGTCCTTTATAAAAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: GHTAHQGGSGTLRIPLLRTALVS*VLYKSD Trigger: ATCACTTTTATAAAGGACTCAGGAGACAAGGGCAGT...CCTCAGAAGGGGAATTCTAAGAGTCCCTGACCCACCCTGGTGTGCTGTGTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR GCA 90 bp | GGACAGCTTTGTTGCTCTGAATGTGTAAATGGTCCTCAGGGACCAACACCTGATGAGATGGGCCCATCCTaGTGGATTGTCCATGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: GQLCCSECVNGPQGPTPDEMGPS*WIVHVC Trigger: GCAGACATGGACAATCCAGCAGGATGGGCCCATCTC...ATCAGGTGTTGGTCCCTGAGGACCATTTACACATTCAGAGCAACAAAGCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR GCA 90 bp | CAGCCAGGACAGCTTTGTTGCTCTGAATGTGTAAATGGTCCTCAGGGACCAACACTGTGCTGGAGGATGTaGACCCCTTTCAGGGATATC | + |
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Preference number: 4 (lower is better) Translates to: QPGQLCCSECVNGPQGPTLCWRM*TPFRDI Trigger: GATATCCCTGAAAGGGGTGCACATCCTCCAGCACAG...TGTTGGTCCCTGAGGACCATTTACACATTCAGAGCAACAAAGCTGTCCTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CCA 90 bp | AGACAGCCAGGACAGCTTTGTTGCTCTGAATGTGTAAATGGTCCTCAGGGACCATCTGCGTGGCACAGCTaGAAAGGTGTGAACTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: RQPGQLCCSECVNGPQGPSAWHS*KGVNWS Trigger: ACTCCAGTTCACACCTTTCCAGCTGTGCCACGCAGA...TGGTCCCTGAGGACCATTTACACATTCAGAGCAACAAAGCTGTCCTGGCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CCA 90 bp | CTTTGTTGCTCTGAATGTGTAAATGGTCCTCAGGGACCAACACCTGATGGGAGCATGGGCCCATCCTGCTaGATTGTCCATGTCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LCCSECVNGPQGPTPDGSMGPSC*IVHVCK Trigger: CTTGCAGACATGGACAATCCAGCAGGATGGGCCCAT...GCTCCCATCAGGTGTTGGTCCCTGAGGACCATTTACACATTCAGAGCAACAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CCA 90 bp | GAGCAGAGGTTGGCTGAGAACATCCCTTTTCAAATGGCTCAGACAGGAGTTATCAGGACGCTGTCAAACTaGTCACTGCCAGGCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: EQRLAENIPFQMAQTGVIRTLSN*SLPGRR Trigger: TCTCCTGCCTGGCAGTGACCAGTTTGACAGCGTCCT...GATAACTCCTGTCTGAGCCATTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR TCA 90 bp | GATGGGAGCAGAGGTTGGCTGAGAACATCCCTTTTCAAATGGCTCAGACAGGAGTACTGGTCAGGTTCGTaGGCTCTGGAAAGAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: DGSRGWLRTSLFKWLRQEYWSGS*ALERGF Trigger: AAAACCTCTTTCCAGAGCTCACGAACCTGACCAGTA...CTCCTGTCTGAGCCATTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CCA 90 bp | AGACAGCCAGGACAGCTTTGTTGCTCTGAATGTGTAAATGGTCCTCAGGGACCAGCCTCTGCTGTCCTCTaGCAGTCCACGATACTTATA | + |
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Preference number: 4 (lower is better) Translates to: RQPGQLCCSECVNGPQGPASAVL*QSTILI Trigger: TATAAGTATCGTGGACTGCCAGAGGACAGCAGAGGC...TGGTCCCTGAGGACCATTTACACATTCAGAGCAACAAAGCTGTCCTGGCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CCA 90 bp | CAGCCAGGACAGCTTTGTTGCTCTGAATGTGTAAATGGTCCTCAGGGACCAACAGTAGAGATGAATAGCTaGATCGTTCCCACTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: QPGQLCCSECVNGPQGPTVEMNS*IVPTQQ Trigger: CTGCTGAGTGGGAACGATCCAGCTATTCATCTCTAC...TGTTGGTCCCTGAGGACCATTTACACATTCAGAGCAACAAAGCTGTCCTGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR TCA 90 bp | CAGCCAGGACAGCTTTGTTGCTCTGAATGTGTAAATGGTCCTCAGGGACCAACAACAGCTGGAAAGGTGTaGACTGGAGTTCCAAATTCA | + |
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Preference number: 4 (lower is better) Translates to: QPGQLCCSECVNGPQGPTTAGKV*TGVPNS Trigger: TGAATTTGGAACTCCAGTTCACACCTTTCCAGCTGT...TGTTGGTCCCTGAGGACCATTTACACATTCAGAGCAACAAAGCTGTCCTGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CCA 90 bp | GGCCATCTCCAGTCAGGTCCACATGGGCCATGGCCAGCAGGGGGCTaGCGAAGCTCCTGCGCCACAGCAGGCGGAAGCCTCTGCTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: GHLQSGPHGPWPAGG*RSSCATAGGSLCCP Trigger: AGGACAGCAGAGGCTTCCGCCTGCTGTGGCGCAGGAGCTTCGCCAGCCCCCTGCTGGCCATGGCCCATGTGGACCTGACTGGAGATGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS TCA 90 bp | CGCCTCCAGCAAGCCCGTACACGTTGCTTTGCGACGAGAAGCGCGTaGAGCTGTCCTCCAGCAGTGGACAAGGTCCCTCTGCCACGGCCG | + |
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Preference number: 5 (lower is better) Translates to: RLQQARTRCFATRSA*SCPPAVDKVPLPRP Trigger: CGGCCGTGGCAGAGGGACCTTGTCCACTGCTGGAGGACAGCTTCACGCGCTTCTCGTCGCAAAGCAACGTGTACGGGCTTGCTGGAGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS GCA 90 bp | TCCCCTCGCCCGTCCGCGCCTCCAGCAAGCCCGTACACGTTGCTTTaGGACGAGAAGCGCGTGAAGCTGTCCTCCAGCAGTGGACAAGGT | + |
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Preference number: 5 (lower is better) Translates to: SPRPSAPPASPYTLL*DEKRVKLSSSSGQG Trigger: ACCTTGTCCACTGCTGGAGGACAGCTTCACGCGCTTCTCGTCGCAAAGCAACGTGTACGGGCTTGCTGGAGGCGCGGACGGGCGAGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS GCA 90 bp | GCAGGGGGCTGGCGAAGCTCCTGCGCCACAGCAGGCGGAAGCCTCTaGTGTCCTCTGGCAGTCCACGATACTTATAGCAGAGCAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: AGGWRSSCATAGGSL*CPLAVHDTYSRAAP Trigger: AGGAGCTGCTCTGCTATAAGTATCGTGGACTGCCAGAGGACAGCAGAGGCTTCCGCCTGCTGTGGCGCAGGAGCTTCGCCAGCCCCCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS TCA 90 bp | CTTCCTGCTGGGGGCTGTCCTGTGTTGCCTCCGAGGCTGACAGGCTaGACACAATCACTCGGGAGATGGGCCCATCCTGCTGGATTGTCC | + |
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Preference number: 5 (lower is better) Translates to: LPAGGCPVLPPRLTG*TQSLGRWAHPAGLS Trigger: GGACAATCCAGCAGGATGGGCCCATCTCCCGAGTGATTGTGTTCAGCCTGTCAGCCTCGGAGGCAACACAGGACAGCCCCCAGCAGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS GCA 90 bp | ACAGCTGGCTCCAGCATGCTGGCCACAAGCAGACTGTATCCTTCCTaGTGGGGGCTGTCCTGTGTTGCCTCCGAGGCTGACAGGCTGAAC | + |
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Preference number: 5 (lower is better) Translates to: TAGSSMLATSRLYPS*WGLSCVASEADRLN Trigger: GTTCAGCCTGTCAGCCTCGGAGGCAACACAGGACAGCCCCCAGCAGGAAGGATACAGTCTGCTTGTGGCCAGCATGCTGGAGCCAGCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CCA 90 bp | GCTGGCTCCAGCATGCTGGCCACAAGCAGACTGTATCCTTCCTGCTaGGGGCTGTCCTGTGTTGCCTCCGAGGCTGACAGGCTGAACACA | + |
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Preference number: 5 (lower is better) Translates to: AGSSMLATSRLYPSC*GLSCVASEADRLNT Trigger: TGTGTTCAGCCTGTCAGCCTCGGAGGCAACACAGGACAGCCCCCAGCAGGAAGGATACAGTCTGCTTGTGGCCAGCATGCTGGAGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS TCA 90 bp | AGGTGGCCACCAGGACTTCCGGTTGTCCATCTAGGTCCACGTCAGTaGCCAGGCCACAGAGGACGCTGTCAAACTGGTCACTGCCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RWPPGLPVVHLGPRQ*PGHRGRCQTGHCQA Trigger: TGCCTGGCAGTGACCAGTTTGACAGCGTCCTCTGTGGCCTGGTCACTGACGTGGACCTAGATGGACAACCGGAAGTCCTGGTGGCCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CCA 90 bp | TGGCAGCCGAGAGCCGAGAGCCGCTGGGATGAGCCAGGGAGGTTGTaGACATCAAGCCAAAGGACACTACTGGTCAGGTTCGTGAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: WQPRAESRWDEPGRL*TSSQRTLLVRFVSS Trigger: AGAGCTCACGAACCTGACCAGTAGTGTCCTTTGGCTTGATGTCCACAACCTCCCTGGCTCATCCCAGCGGCTCTCGGCTCTCGGCTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CAA 90 bp | CACACAGCACACCAGGGTGGGTCAGGGACTCTTAGAATTCCCCTTCTGAGGGAGCGGAAGCCGAGCACCTaGCCTTTAAGAGTGGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: HTAHQGGSGTLRIPLLRERKPST*PLRVAA Trigger: GGCCGCCACTCTTAAAGGCAAGGTGCTCGGCTTCCG...CTCCCTCAGAAGGGGAATTCTAAGAGTCCCTGACCCACCCTGGTGTGCTGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS TCA 90 bp | ACGCACATAACCACTCTGGCAGCCGAGAGCCGAGAGCCGCTGGGATaGGCCAGGGAGGTTGTGGACATCAAGCCAAAGGACACTACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: THITTLAAESREPLG*AREVVDIKPKDTTG Trigger: ACCAGTAGTGTCCTTTGGCTTGATGTCCACAACCTCCCTGGCTCATCCCAGCGGCTCTCGGCTCTCGGCTGCCAGAGTGGTTATGTGCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CAA 90 bp | CACACAGCACACCAGGGTGGGTCAGGGACTCTTAGAATTCCCCTTCTGAGGGAGCCCGTACACGTTGCTTaGCGACGAGAAGCGCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HTAHQGGSGTLRIPLLREPVHVA*RREARE Trigger: TTCACGCGCTTCTCGTCGCAAAGCAACGTGTACGGG...CTCCCTCAGAAGGGGAATTCTAAGAGTCCCTGACCCACCCTGGTGTGCTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CCA 90 bp | ACCGTCTCCAGCTGGTCCCCAACCTGGACTTCTGCGTGGCACAGCTaGAAAGGTGTGAACTGGAGTTCCAAATTCAGGCAGCTCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVSSWSPTWTSAWHS*KGVNWSSKFRQLSA Trigger: TGCAGAGAGCTGCCTGAATTTGGAACTCCAGTTCACACCTTTCCAGCTGTGCCACGCAGAAGTCCAGGTTGGGGACCAGCTGGAGACGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CCA 90 bp | TCTAGGTCCACGTCAGTGACCAGGCCACAGAGGACGCTGTCAAACTaGTCACTGCCAGGCAGGAGAAGTTGGTCATCCAGACCCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRSTSVTRPQRTLSN*SLPGRRSWSSRPLF Trigger: GAACAAGGGTCTGGATGACCAACTTCTCCTGCCTGGCAGTGACCAGTTTGACAGCGTCCTCTGTGGCCTGGTCACTGACGTGGACCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CAA 90 bp | GAATGTGTAAATGGTCCTCAGGGACCAACACCTGATGGGAGCAGAGGTTGGCTGGCAAGCCCGTACACGTaGCTTTGCGACGAGAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ECVNGPQGPTPDGSRGWLASPYT*LCDEKR Trigger: GCGCTTCTCGTCGCAAAGCAACGTGTACGGGCTTGC...CAGCCAACCTCTGCTCCCATCAGGTGTTGGTCCCTGAGGACCATTTACACATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CCA 90 bp | AGCAGAAACACCGTCTCCAGCTGGTCCCCAACCTGGACTTCTGCGTaGCACAGCTGGAAAGGTGTGAACTGGAGTTCCAAATTCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRNTVSSWSPTWTSA*HSWKGVNWSSKFRQ Trigger: CTGCCTGAATTTGGAACTCCAGTTCACACCTTTCCAGCTGTGCCACGCAGAAGTCCAGGTTGGGGACCAGCTGGAGACGGTGTTTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CAA 90 bp | CCTCAGGGACCAACACCTGATGGGAGCAGAGGTTGGCTGAGAACATCCCTTTTCTTTCTGTCGGAGGTCTaGATAGCGGAAGCCGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PQGPTPDGSRGWLRTSLFFLSEV*IAEAEH Trigger: GTGCTCGGCTTCCGCTATCAAGACCTCCGACAGAAA...GAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATCAGGTGTTGGTCCCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CAA 90 bp | CCTCAGGGACCAACACCTGATGGGAGCAGAGGTTGGCTGAGAACATCCCTTTTCGCCAGGCAGGAGAAGTaGGTCATCCAGACCCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PQGPTPDGSRGWLRTSLFARQEK*VIQTLV Trigger: AACAAGGGTCTGGATGACCAACTTCTCCTGCCTGGC...GAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATCAGGTGTTGGTCCCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CCA 90 bp | TTGGTCATCCAGACCCTTGTTCAGAAGATCCCAGTACACCACAGCTaGCTCCAGCATGCTGGCCACAAGCAGACTGTATCCTTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVIQTLVQKIPVHHS*LQHAGHKQTVSFLL Trigger: CAGCAGGAAGGATACAGTCTGCTTGTGGCCAGCATGCTGGAGCCAGCTGTGGTGTACTGGGATCTTCTGAACAAGGGTCTGGATGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
||
| CDS CCA 90 bp | CCACAGAGGACGCTGTCAAACTGGTCACTGCCAGGCAGGAGAAGTTaGTCATCCAGACCCTTGTTCAGAAGATCCCAGTACACCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQRTLSNWSLPGRRS*SSRPLFRRSQYTTA Trigger: AGCTGTGGTGTACTGGGATCTTCTGAACAAGGGTCTGGATGACCAACTTCTCCTGCCTGGCAGTGACCAGTTTGACAGCGTCCTCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
||
| CDS CCA 90 bp | TCCCCAACCTGGACTTCTGCGTGGCACAGCTGGAAAGGTGTGAACTaGAGTTCCAAATTCAGGCAGCTCTCTGCAATAGAGTCCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPTWTSAWHSWKGVN*SSKFRQLSAIESRL Trigger: CAACCTGGACTCTATTGCAGAGAGCTGCCTGAATTTGGAACTCCAGTTCACACCTTTCCAGCTGTGCCACGCAGAAGTCCAGGTTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS TCA 90 bp | GGAGGTTGTGGACATCAAGCCAAAGGACACTACTGGTCAGGTTCGTaGGCTCTGGAAAGAGGTTTTCCACGGGCTGCTCCTCAAACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GGCGHQAKGHYWSGS*ALERGFPRAAPQTD Trigger: ATCAGTTTGAGGAGCAGCCCGTGGAAAACCTCTTTCCAGAGCTCACGAACCTGACCAGTAGTGTCCTTTGGCTTGATGTCCACAACCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CAA 90 bp | GATGGGAGCAGAGGTTGGCTGAGAACATCCCTTTTCAAATGGCTCAGACAGGAGGCAATAGAGTCCAGGTaGTACTCTGAGCCAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: DGSRGWLRTSLFKWLRQEAIESR*YSEPGS Trigger: TGAGCCTGGCTCAGAGTACAACCTGGACTCTATTGC...CTCCTGTCTGAGCCATTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
||
| CDS-3UTR CAA 90 bp | CTTTGTTGCTCTGAATGTGTAAATGGTCCTCAGGGACCAACACCTGATGGGAGCGCCCATCCTGCTGGATaGTCCATGTCTGCAAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: LCCSECVNGPQGPTPDGSAHPAG*SMSARS Trigger: AGATCTTGCAGACATGGACAATCCAGCAGGATGGGC...GCTCCCATCAGGTGTTGGTCCCTGAGGACCATTTACACATTCAGAGCAACAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
||
| CDS-3UTR CAA 90 bp | GATGGGAGCAGAGGTTGGCTGAGAACATCCCTTTTCAAATGGCTCAGACAGGAGTTTCCTCTGCTCCACTaGATGACGAAGCCGTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: DGSRGWLRTSLFKWLRQEFPLLH*MTKPCQ Trigger: TTGACACGGCTTCGTCATCAAGTGGAGCAGAGGAAA...CTCCTGTCTGAGCCATTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
||
| CDS-3UTR CAA 90 bp | CTTTGTTGCTCTGAATGTGTAAATGGTCCTCAGGGACCAACACCTGATGGGAGCTTTGGGGGTGACTTGTaGAAAGTGTCGATGGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: LCCSECVNGPQGPTPDGSFGGDL*KVSMET Trigger: CGTCTCCATCGACACTTTCAACAAGTCACCCCCAAA...GCTCCCATCAGGTGTTGGTCCCTGAGGACCATTTACACATTCAGAGCAACAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CAA 90 bp | CAGCCAGGACAGCTTTGTTGCTCTGAATGTGTAAATGGTCCTCAGGGACCAACACGTTTTGGGGGTGACTaGTTGAAAGTGTCGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QPGQLCCSECVNGPQGPTRFGGD*LKVSME Trigger: CTCCATCGACACTTTCAACAAGTCACCCCCAAAACG...TGTTGGTCCCTGAGGACCATTTACACATTCAGAGCAACAAAGCTGTCCTGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CAA 90 bp | CAGCCAGGACAGCTTTGTTGCTCTGAATGTGTAAATGGTCCTCAGGGACCAACATGGTCATCCAGACCCTaGTTCAGAAGATCCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QPGQLCCSECVNGPQGPTWSSRP*FRRSQY Trigger: GTACTGGGATCTTCTGAACAAGGGTCTGGATGACCA...TGTTGGTCCCTGAGGACCATTTACACATTCAGAGCAACAAAGCTGTCCTGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS-3UTR CAA 90 bp | ACACCTGATGGGAGCAGAGGTTGGCTGAGAACATCCCTTTTCAAATGGCTCAGATGTCTGCAAGATCTCTaGATTCTTCTGGTCCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: TPDGSRGWLRTSLFKWLRCLQDL*ILLVHV Trigger: CACGTGGACCAGAAGAATCAAGAGATCTTGCAGACA...TCTGAGCCATTTGAAAAGGGATGTTCTCAGCCAACCTCTGCTCCCATCAGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
||
| CDS TCA 90 bp | TTCCAAATTCAGGCAGCTCTCTGCAATAGAGTCCAGGTTGTACTCTaGGCCAGGCTCATAGTCACAGTAAATGTTAAGAAACGGACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FQIQAALCNRVQVVL*ARLIVTVNVKKRTA Trigger: GGCAGTCCGTTTCTTAACATTTACTGTGACTATGAGCCTGGCTCAGAGTACAACCTGGACTCTATTGCAGAGAGCTGCCTGAATTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CCA 72 bp | CAGTCAGGTCCACATGGGCCATGGCCAGCAGGGGGCTaGCGAAGCTCCTGCGCCACAGCAGGCGGAAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QSGPHGPWPAGG*RSSCATAGGSL Trigger: GAGGCTTCCGCCTGCTGTGGCGCAGGAGCTTCGCCAGCCCCCTGCTGGCCATGGCCCATGTGGACCTGACTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CAA 72 bp | CCTCGCCCGTCCGCGCCTCCAGCAAGCCCGTACACGTaGCTTTGCGACGAGAAGCGCGTGAAGCTGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PRPSAPPASPYT*LCDEKRVKLSS Trigger: GGAGGACAGCTTCACGCGCTTCTCGTCGCAAAGCAACGTGTACGGGCTTGCTGGAGGCGCGGACGGGCGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CAA 90 bp | CTCCCCTCGCCCGTCCGCGCCTCCAGCAAGCCCGTACACGTTGCTTaGCGACGAGAAGCGCGTGAAGCTGTCCTCCAGCAGTGGACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LPSPVRASSKPVHVA*RREAREAVLQQWTR Trigger: CCTTGTCCACTGCTGGAGGACAGCTTCACGCGCTTCTCGTCGCAAAGCAACGTGTACGGGCTTGCTGGAGGCGCGGACGGGCGAGGGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CAA 72 bp | CCCGTCCGCGCCTCCAGCAAGCCCGTACACGTTGCTTaGCGACGAGAAGCGCGTGAAGCTGTCCTCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PVRASSKPVHVA*RREAREAVLQQ Trigger: CTGCTGGAGGACAGCTTCACGCGCTTCTCGTCGCAAAGCAACGTGTACGGGCTTGCTGGAGGCGCGGACGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CAA 90 bp | AGCAACTCCCCTCGCCCGTCCGCGCCTCCAGCAAGCCCGTACACGTaGCTTTGCGACGAGAAGCGCGTGAAGCTGTCCTCCAGCAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SNSPRPSAPPASPYT*LCDEKRVKLSSSSG Trigger: TCCACTGCTGGAGGACAGCTTCACGCGCTTCTCGTCGCAAAGCAACGTGTACGGGCTTGCTGGAGGCGCGGACGGGCGAGGGGAGTTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS GCA 72 bp | CCGTCCGCGCCTCCAGCAAGCCCGTACACGTTGCTTTaGGACGAGAAGCGCGTGAAGCTGTCCTCCAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PSAPPASPYTLL*DEKRVKLSSSS Trigger: ACTGCTGGAGGACAGCTTCACGCGCTTCTCGTCGCAAAGCAACGTGTACGGGCTTGCTGGAGGCGCGGACGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS TCA 72 bp | GGGGGCTGTCCTGTGTTGCCTCCGAGGCTGACAGGCTaGACACAATCACTCGGGAGATGGGCCCATCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GGCPVLPPRLTG*TQSLGRWAHPA Trigger: AGCAGGATGGGCCCATCTCCCGAGTGATTGTGTTCAGCCTGTCAGCCTCGGAGGCAACACAGGACAGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CAA 90 bp | CTCTGGCAGCCGAGAGCCGAGAGCCGCTGGGATGAGCCAGGGAGGTaGTGGACATCAAGCCAAAGGACACTACTGGTCAGGTTCGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LWQPRAESRWDEPGR*WTSSQRTLLVRFVS Trigger: GCTCACGAACCTGACCAGTAGTGTCCTTTGGCTTGATGTCCACAACCTCCCTGGCTCATCCCAGCGGCTCTCGGCTCTCGGCTGCCAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CCA 72 bp | GGATCGTTCCCACTCAGCAGAAACACCGTCTCCAGCTaGTCCCCAACCTGGACTTCTGCGTGGCACAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSFPLSRNTVSS*SPTWTSAWHSW Trigger: CCAGCTGTGCCACGCAGAAGTCCAGGTTGGGGACCAGCTGGAGACGGTGTTTCTGCTGAGTGGGAACGATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CCA 72 bp | AGCATGCTGGCCACAAGCAGACTGTATCCTTCCTGCTaGGGGCTGTCCTGTGTTGCCTCCGAGGCTGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SMLATSRLYPSC*GLSCVASEADR Trigger: CCTGTCAGCCTCGGAGGCAACACAGGACAGCCCCCAGCAGGAAGGATACAGTCTGCTTGTGGCCAGCATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CAA 72 bp | CCGAGAGCCGAGAGCCGCTGGGATGAGCCAGGGAGGTaGTGGACATCAAGCCAAAGGACACTACTGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PRAESRWDEPGR*WTSSQRTLLVR Trigger: CCTGACCAGTAGTGTCCTTTGGCTTGATGTCCACAACCTCCCTGGCTCATCCCAGCGGCTCTCGGCTCTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS TCA 72 bp | CAAGCCCGTACACGTTGCTTTGCGACGAGAAGCGCGTaGAGCTGTCCTCCAGCAGTGGACAAGGTCCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QARTRCFATRSA*SCPPAVDKVPL Trigger: CAGAGGGACCTTGTCCACTGCTGGAGGACAGCTTCACGCGCTTCTCGTCGCAAAGCAACGTGTACGGGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS GCA 72 bp | TGGCGAAGCTCCTGCGCCACAGCAGGCGGAAGCCTCTaGTGTCCTCTGGCAGTCCACGATACTTATAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WRSSCATAGGSL*CPLAVHDTYSR Trigger: TCTGCTATAAGTATCGTGGACTGCCAGAGGACAGCAGAGGCTTCCGCCTGCTGTGGCGCAGGAGCTTCGCCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS TCA 72 bp | CCAGGACTTCCGGTTGTCCATCTAGGTCCACGTCAGTaGCCAGGCCACAGAGGACGCTGTCAAACTGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PGLPVVHLGPRQ*PGHRGRCQTGH Trigger: GTGACCAGTTTGACAGCGTCCTCTGTGGCCTGGTCACTGACGTGGACCTAGATGGACAACCGGAAGTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CCA 72 bp | CTCAGCAGAAACACCGTCTCCAGCTGGTCCCCAACCTaGACTTCTGCGTGGCACAGCTGGAAAGGTGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LSRNTVSSWSPT*TSAWHSWKGVN Trigger: GTTCACACCTTTCCAGCTGTGCCACGCAGAAGTCCAGGTTGGGGACCAGCTGGAGACGGTGTTTCTGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS GCA 72 bp | TCAGAAGATCCCAGTACACCACAGCTGGCTCCAGCATaGTGGCCACAAGCAGACTGTATCCTTCCTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SEDPSTPQLAPA*WPQADCILPAG Trigger: CCCAGCAGGAAGGATACAGTCTGCTTGTGGCCAGCATGCTGGAGCCAGCTGTGGTGTACTGGGATCTTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CCA 72 bp | ACCGTCTCCAGCTGGTCCCCAACCTGGACTTCTGCGTaGCACAGCTGGAAAGGTGTGAACTGGAGTTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: TVSSWSPTWTSA*HSWKGVNWSSK Trigger: TTTGGAACTCCAGTTCACACCTTTCCAGCTGTGCCACGCAGAAGTCCAGGTTGGGGACCAGCTGGAGACGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CCA 72 bp | ACGTCAGTGACCAGGCCACAGAGGACGCTGTCAAACTaGTCACTGCCAGGCAGGAGAAGTTGGTCATCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TSVTRPQRTLSN*SLPGRRSWSSR Trigger: TCTGGATGACCAACTTCTCCTGCCTGGCAGTGACCAGTTTGACAGCGTCCTCTGTGGCCTGGTCACTGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CAA 90 bp | GAATTGCAGCTCTTTAGCCACAGGCCGGATTTTCTGTCGGAGGTCTaGATAGCGGAAGCCGAGCACCTTGCCTTTAAGAGTGGCGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ELQLFSHRPDFLSEV*IAEAEHLAFKSGGQ Trigger: CTGGCCGCCACTCTTAAAGGCAAGGTGCTCGGCTTCCGCTATCAAGACCTCCGACAGAAAATCCGGCCTGTGGCTAAAGAGCTGCAATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CAA 90 bp | GCCACAGAGGACGCTGTCAAACTGGTCACTGCCAGGCAGGAGAAGTaGGTCATCCAGACCCTTGTTCAGAAGATCCCAGTACACCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: ATEDAVKLVTARQEK*VIQTLVQKIPVHHS Trigger: GCTGTGGTGTACTGGGATCTTCTGAACAAGGGTCTGGATGACCAACTTCTCCTGCCTGGCAGTGACCAGTTTGACAGCGTCCTCTGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CCA 72 bp | AGCTGGTCCCCAACCTGGACTTCTGCGTGGCACAGCTaGAAAGGTGTGAACTGGAGTTCCAAATTCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SWSPTWTSAWHS*KGVNWSSKFRQ Trigger: CTGCCTGAATTTGGAACTCCAGTTCACACCTTTCCAGCTGTGCCACGCAGAAGTCCAGGTTGGGGACCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CCA 72 bp | CAGACCCTTGTTCAGAAGATCCCAGTACACCACAGCTaGCTCCAGCATGCTGGCCACAAGCAGACTGTATCC | + |
|
Preference number: 6 (lower is better) Translates to: QTLVQKIPVHHS*LQHAGHKQTVS Trigger: GGATACAGTCTGCTTGTGGCCAGCATGCTGGAGCCAGCTGTGGTGTACTGGGATCTTCTGAACAAGGGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CAA 72 bp | TCACTGCCAGGCAGGAGAAGTTGGTCATCCAGACCCTaGTTCAGAAGATCCCAGTACACCACAGCTGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLPGRRSWSSRP*FRRSQYTTAGS Trigger: GGAGCCAGCTGTGGTGTACTGGGATCTTCTGAACAAGGGTCTGGATGACCAACTTCTCCTGCCTGGCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CAA 90 bp | TCAAACTGGTCACTGCCAGGCAGGAGAAGTTGGTCATCCAGACCCTaGTTCAGAAGATCCCAGTACACCACAGCTGGCTCCAGCATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SNWSLPGRRSWSSRP*FRRSQYTTAGSSML Trigger: CAGCATGCTGGAGCCAGCTGTGGTGTACTGGGATCTTCTGAACAAGGGTCTGGATGACCAACTTCTCCTGCCTGGCAGTGACCAGTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS TCA 72 bp | GGACATCAAGCCAAAGGACACTACTGGTCAGGTTCGTaGGCTCTGGAAAGAGGTTTTCCACGGGCTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GHQAKGHYWSGS*ALERGFPRAAP Trigger: AGGAGCAGCCCGTGGAAAACCTCTTTCCAGAGCTCACGAACCTGACCAGTAGTGTCCTTTGGCTTGATGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
||
| CDS CCA 72 bp | CACGATACTTATAGCAGAGCAGCTCCTGTCCATAGGTaGCCACCAGGACTTCCGGTTGTCCATCTAGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HDTYSRAAPVHR*PPGLPVVHLGP Trigger: TGGACCTAGATGGACAACCGGAAGTCCTGGTGGCCACCTATGGACAGGAGCTGCTCTGCTATAAGTATCGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
||
| CDS CAA 90 bp | GGAGATGGGCCCATCCTGCTGGATTGTCCATGTCTGCAAGATCTCTaGATTCTTCTGGTCCACGTGAGCCACACGCACATAACCACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GDGPILLDCPCLQDL*ILLVHVSHTHITTL Trigger: CAGAGTGGTTATGTGCGTGTGGCTCACGTGGACCAGAAGAATCAAGAGATCTTGCAGACATGGACAATCCAGCAGGATGGGCCCATCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
||
| CDS CCA 72 bp | AAGCCAAAGGACACTACTGGTCAGGTTCGTGAGCTCTaGAAAGAGGTTTTCCACGGGCTGCTCCTCAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: KPKDTTGQVREL*KEVFHGLLLKL Trigger: CAGTTTGAGGAGCAGCCCGTGGAAAACCTCTTTCCAGAGCTCACGAACCTGACCAGTAGTGTCCTTTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
||
| CDS CAA 72 bp | CTCTTTAGCCACAGGCCGGATTTTCTGTCGGAGGTCTaGATAGCGGAAGCCGAGCACCTTGCCTTTAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LFSHRPDFLSEV*IAEAEHLAFKS Trigger: ACTCTTAAAGGCAAGGTGCTCGGCTTCCGCTATCAAGACCTCCGACAGAAAATCCGGCCTGTGGCTAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
||
| CDS CAA 72 bp | GACGCTGTCAAACTGGTCACTGCCAGGCAGGAGAAGTaGGTCATCCAGACCCTTGTTCAGAAGATCCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: DAVKLVTARQEK*VIQTLVQKIPV Trigger: TACTGGGATCTTCTGAACAAGGGTCTGGATGACCAACTTCTCCTGCCTGGCAGTGACCAGTTTGACAGCGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS CAA 72 bp | CCCATCCTGCTGGATTGTCCATGTCTGCAAGATCTCTaGATTCTTCTGGTCCACGTGAGCCACACGCACATA | + |
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Preference number: 6 (lower is better) Translates to: PILLDCPCLQDL*ILLVHVSHTHI Trigger: TATGTGCGTGTGGCTCACGTGGACCAGAAGAATCAAGAGATCTTGCAGACATGGACAATCCAGCAGGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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| CDS TCA 72 bp | CAGGCAGCTCTCTGCAATAGAGTCCAGGTTGTACTCTaGGCCAGGCTCATAGTCACAGTAAATGTTAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: QAALCNRVQVVL*ARLIVTVNVKK Trigger: TTTCTTAACATTTACTGTGACTATGAGCCTGGCTCAGAGTACAACCTGGACTCTATTGCAGAGAGCTGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006178.5 |
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