Pregenerated sensors for KPNB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001440Ensembl transcript IDs: ENSMUST00000001479.5
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATCGGCACTTTGACTCTGAACCTGGCACCAAAAGGCACAATATCTaGTACCCTGTAAAGAGCTACTACAGACGCTGCATTTCGTACGGA | + |
|
Preference number: 1 (lower is better) Translates to: DRHFDSEPGTKRHNI*YPVKSYYRRCISYG Trigger: TCCGTACGAAATGCAGCGTCTGTAGTAGCTCTTTACAGGGTATCAGATATTGTGCCTTTTGGTGCCAGGTTCAGAGTCAAAGTGCCGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR GCA 90 bp | AAGACCACAATCCAATCAGCCCATTTCCTCCTCTCGAGCACTGAATaGATCTGGGAGAAAGGATTAGTAACAGCACTTGTCAACTGCTTC | + |
|
Preference number: 1 (lower is better) Translates to: KTTIQSAHFLLSSTE*IWEKGLVTALVNCF Trigger: GAAGCAGTTGACAAGTGCTGTTACTAATCCTTTCTCCCAGATGCATTCAGTGCTCGAGAGGAGGAAATGGGCTGATTGGATTGTGGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR CCA 90 bp | GTATGCTGTGTATACGGATACACACACACTGTCTTAGTGGTTAGTTaGTTTGGAGTGCAGCAAGAGACCAATACCGCATTGCAGTCAGTC | + |
|
Preference number: 1 (lower is better) Translates to: VCCVYGYTHTVLVVS*FGVQQETNTALQSV Trigger: GACTGACTGCAATGCGGTATTGGTCTCTTGCTGCACTCCAAACCAACTAACCACTAAGACAGTGTGTGTGTATCCGTATACACAGCATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR TCA 90 bp | AACTACACACATCTTAAAATAGTAAGTAAGGAGACTGCTTGGTTCTaGACATTAGAACACCATACTGAGCAAGTCCCTCCACTTCTCCAG | + |
|
Preference number: 1 (lower is better) Translates to: NYTHLKIVSKETAWF*TLEHHTEQVPPLLQ Trigger: CTGGAGAAGTGGAGGGACTTGCTCAGTATGGTGTTCTAATGTTCAGAACCAAGCAGTCTCCTTACTTACTATTTTAAGATGTGTGTAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR TCA 90 bp | TGCTTCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGACACAGCCCCACAGGTaGACCCAGGTCCTCCTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: CFPGTEHDKTQARSCFHQTQPHR*TQVLLS Trigger: GGAGAGGAGGACCTGGGTTCACCTGTGGGGCTGTGT...CTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR GCA 90 bp | TGGAAACAAGGCGTTCAGAGGCCTGGGCTTCTCCCGAGGGCTTGGACTCCTAGAAGACCAATACCGCATTaGAGTCAGTCAAAGAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: WKQGVQRPGLLPRAWTPRRPIPH*SQSKKG Trigger: CCCTTTCTTTGACTGACTGCAATGCGGTATTGGTCT...TCTAGGAGTCCAAGCCCTCGGGAGAAGCCCAGGCCTCTGAACGCCTTGTTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR GCA 90 bp | TGGAAACAAGGCGTTCAGAGGCCTGGGCTTCTCCCGAGGGCTTGGACTCCTAGAGAGCCTTCTTCCTGGTaGCATTTTCATCACAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: WKQGVQRPGLLPRAWTPREPSSW*HFHHNS Trigger: ACTGTTGTGATGAAAATGGCACCAGGAAGAAGGCTC...TCTAGGAGTCCAAGCCCTCGGGAGAAGCCCAGGCCTCTGAACGCCTTGTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR TCA 90 bp | TGGAAACAAGGCGTTCAGAGGCCTGGGCTTCTCCCGAGGGCTTGGACTCCTAGAAAAAGGCACAATATCTaGTACCCTGTAAAGAGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: WKQGVQRPGLLPRAWTPRKRHNI*YPVKSY Trigger: GTAGCTCTTTACAGGGTATCAGATATTGTGCCTTTT...TCTAGGAGTCCAAGCCCTCGGGAGAAGCCCAGGCCTCTGAACGCCTTGTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR GCA 90 bp | CAGCAAGGCACCAAGACCACAATCCAATCAGCCCATTTCCTCCTCTCGAGCACTTTAGTTGGTTTGGAGTaGAGCAAGAGACCAATACCG | + |
|
Preference number: 2 (lower is better) Translates to: QQGTKTTIQSAHFLLSSTLVGLE*SKRPIP Trigger: CGGTATTGGTCTCTTGCTGCACTCCAAACCAACTAA...AGTGCTCGAGAGGAGGAAATGGGCTGATTGGATTGTGGTCTTGGTGCCTTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR GCA 90 bp | AACCAGTGCAGAATAGAACAGCAAGGCACCAAGACCACAATCCAATCAGCCCATGTGTACTTCATCCTCTaGTGTCTCGCTAAGCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: NQCRIEQQGTKTTIQSAHVYFIL*CLAKQP Trigger: GGGCTGCTTAGCGAGACAGCAGAGGATGAAGTACAC...ATGGGCTGATTGGATTGTGGTCTTGGTGCCTTGCTGTTCTATTCTGCACTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR TCA 90 bp | GAGAAAGGATTAGTAACAGCACTTGTCAACTGCTTCCCTGGAACAGAACACGACAGAGGGCCAGCTTACTaGAATGCTTTCTTATTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: EKGLVTALVNCFPGTEHDRGPAY*NAFLLL Trigger: CAGCAATAAGAAAGCATTTCAGTAAGCTGGCCCTCT...GTCGTGTTCTGTTCCAGGGAAGCAGTTGACAAGTGCTGTTACTAATCCTTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR GCA 90 bp | GAGAAAGGATTAGTAACAGCACTTGTCAACTGCTTCCCTGGAACAGAACACGACATAGACAGTACCAAGTaGAACGGTACAGTGAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: EKGLVTALVNCFPGTEHDIDSTK*NGTVKV Trigger: CACCTTCACTGTACCGTTGCACTTGGTACTGTCTAT...GTCGTGTTCTGTTCCAGGGAAGCAGTTGACAAGTGCTGTTACTAATCCTTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR CCA 90 bp | CACCATTTTACTAATCTTCAACTTCAGTGGAAAAATAGAGCCTTCTTCCTGGTGCAGCGCTGCTGCTGTTaGCTGTGGCAGGATTTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: HHFTNLQLQWKNRAFFLVQRCCC*LWQDFQ Trigger: CTGAAAATCCTGCCACAGCCAACAGCAGCAGCGCTG...CACCAGGAAGAAGGCTCTATTTTTCCACTGAAGTTGAAGATTAGTAAAATGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGGGTTATAGAGCCTTCTTCCTaGTGCCATTTTCATCACAAC | + |
|
Preference number: 2 (lower is better) Translates to: SLEQNTTKHRQGLVFIRVIEPSS*CHFHHN Trigger: GTTGTGATGAAAATGGCACCAGGAAGAAGGCTCTAT...AACCCTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR CCA 90 bp | AGAATGCATTTCGCATTCATTTGCCTTATGTGGTACGAACTGATTAAGGACAGATGCTGCTGTTGGCTGTaGCAGGATTTTCAGTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: RMHFAFICLMWYELIKDRCCCWL*QDFQCG Trigger: ACCACACTGAAAATCCTGCCACAGCCAACAGCAGCA...TCTGTCCTTAATCAGTTCGTACCACATAAGGCAAATGAATGCGAAATGCATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR GCA 90 bp | TCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGGGTTGCCAGCTTACTGAAATaGTTTCTTATTGCTGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SLEQNTTKHRQGLVFIRVASLLK*FLIAER Trigger: TCTTTCAGCAATAAGAAAGCATTTCAGTAAGCTGGC...AACCCTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR CCA 90 bp | CACACTGTCTTAGTGGTTAGTTGGTTTGGAGTGCAGCAAGAGACCAATACCGCATTCTCTGTTCCAAGATaGCTGATGTTATGTTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: HTVLVVSWFGVQQETNTAFSVPR*LMLCFL Trigger: TAGAAAACATAACATCAGCCATCTTGGAACAGAGAA...TGCGGTATTGGTCTCTTGCTGCACTCCAAACCAACTAACCACTAAGACAGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR TCA 90 bp | AAAAATAGAGCCTTCTTCCTGGTGCCATTTTCATCACAACAGTTGTATTTAGTGAGCTACATTCACAGCTaGACCATAGTACAGGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KNRAFFLVPFSSQQLYLVSYIHS*TIVQER Trigger: CCTTTCCTGTACTATGGTTCAGCTGTGAATGTAGCT...CACTAAATACAACTGTTGTGATGAAAATGGCACCAGGAAGAAGGCTCTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR TCA 90 bp | CACCATTTTACTAATCTTCAACTTCAGTGGAAAAATAGAGCCTTCTTCCTGGTGGAGAGAGCTTGTTTATaGTGCCAATTTCAAGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: HHFTNLQLQWKNRAFFLVERACL*CQFQAF Trigger: AAATGCTTGAAATTGGCATCATAAACAAGCTCTCTC...CACCAGGAAGAAGGCTCTATTTTTCCACTGAAGTTGAAGATTAGTAAAATGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR TCA 90 bp | AGAATGCATTTCGCATTCATTTGCCTTATGTGGTACGAACTGATTAAGGACAGACTAAGCCAATACCTTTaGCTACAATGGAAATGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RMHFAFICLMWYELIKDRLSQYL*LQWKWK Trigger: TTTCCATTTCCATTGTAGTCAAAGGTATTGGCTTAG...TCTGTCCTTAATCAGTTCGTACCACATAAGGCAAATGAATGCGAAATGCATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAACAAGGCGTTCAGAGGCCTGGGCTTCTCCCGAGGGCTTGGACTCCTAGAGATCAGATCGGCACTTaGACTCTGAACCTGGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: WKQGVQRPGLLPRAWTPRDQIGT*TLNLAP Trigger: TGGTGCCAGGTTCAGAGTCAAAGTGCCGATCTGATC...TCTAGGAGTCCAAGCCCTCGGGAGAAGCCCAGGCCTCTGAACGCCTTGTTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAACAAGGCGTTCAGAGGCCTGGGCTTCTCCCGAGGGCTTGGACTCCTAGAATGGGAATGAGGGTCTaGTGTTTCTTCCACACTACC | + |
|
Preference number: 3 (lower is better) Translates to: WKQGVQRPGLLPRAWTPRMGMRV*CFFHTT Trigger: GGTAGTGTGGAAGAAACACAAGACCCTCATTCCCAT...TCTAGGAGTCCAAGCCCTCGGGAGAAGCCCAGGCCTCTGAACGCCTTGTTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGACAGCGCTGCTGCTGTaGGCTGTGGCAGGATTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: CFPGTEHDKTQARSCFHQTALLL*AVAGFS Trigger: TGAAAATCCTGCCACAGCCAACAGCAGCAGCGCTGT...CTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAAGGCACCAAGACCACAATCCAATCAGCCCATTTCCTCCTCTCGAGCACTTGGCTTTTTCTGTCTTaGAAGTCTGCATTTTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: QQGTKTTIQSAHFLLSSTWLFLS*KSAFSL Trigger: CAAAGAAAATGCAGACTTCAAAGACAGAAAAAGCCA...AGTGCTCGAGAGGAGGAAATGGGCTGATTGGATTGTGGTCTTGGTGCCTTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAAGGCACCAAGACCACAATCCAATCAGCCCATTTCCTCCTCTCGAGCACTAAATTTTGGTTTGGGTaGTGGCTTTTTCTGTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: QQGTKTTIQSAHFLLSSTKFWFG*WLFLSL Trigger: CAAAGACAGAAAAAGCCACAACCCAAACCAAAATTT...AGTGCTCGAGAGGAGGAAATGGGCTGATTGGATTGTGGTCTTGGTGCCTTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR CCA 72 bp | GTATACGGATACACACACACTGTCTTAGTGGTTAGTTaGTTTGGAGTGCAGCAAGAGACCAATACCGCATTG | + |
|
Preference number: 3 (lower is better) Translates to: VYGYTHTVLVVS*FGVQQETNTAL Trigger: CAATGCGGTATTGGTCTCTTGCTGCACTCCAAACCAACTAACCACTAAGACAGTGTGTGTGTATCCGTATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR CCA 72 bp | GAAAGGATTAGTAACAGCACTTGTCAACTGCTTCCCTaGAACAGAACACGACAAAACACAGGCAAGGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ERISNSTCQLLP*NRTRQNTGKVL Trigger: CAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGAAGCAGTTGACAAGTGCTGTTACTAATCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR TCA 72 bp | TTTGACTCTGAACCTGGCACCAAAAGGCACAATATCTaGTACCCTGTAAAGAGCTACTACAGACGCTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: FDSEPGTKRHNI*YPVKSYYRRCI Trigger: AATGCAGCGTCTGTAGTAGCTCTTTACAGGGTATCAGATATTGTGCCTTTTGGTGCCAGGTTCAGAGTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAAGGATTAGTAACAGCACTTGTCAACTGCTTCCCTGGAACAGAACACGACAAGTCAGGAGAGAGCTaGTTTATGATGCCAATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: EKGLVTALVNCFPGTEHDKSGES*FMMPIS Trigger: TGAAATTGGCATCATAAACAAGCTCTCTCCTGACTT...GTCGTGTTCTGTTCCAGGGAAGCAGTTGACAAGTGCTGTTACTAATCCTTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR TCA 72 bp | AAGTCTATCCGATGCCCATTTTCTTCACATTTGCACTaGCATCTTCCCAAGCAGACGGTAACTACATTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: KSIRCPFSSHLH*HLPKQTVTTFL Trigger: CAAGAATGTAGTTACCGTCTGCTTGGGAAGATGTCAGTGCAAATGTGAAGAAAATGGGCATCGGATAGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR CCA 72 bp | GTGGACAGAATGCATTTCGCATTCATTTGCCTTATGTaGTACGAACTGATTAAGGACAGACACCCAAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: VDRMHFAFICLM*YELIKDRHPNH Trigger: ATGGTTTGGGTGTCTGTCCTTAATCAGTTCGTACCACATAAGGCAAATGAATGCGAAATGCATTCTGTCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAATGCATTTCGCATTCATTTGCCTTATGTGGTACGAACTGATTAAGGACAGAAACACAGGCAAGGTCTaGTTTTCATCAGGGTTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: RMHFAFICLMWYELIKDRNTGKV*FSSGFS Trigger: CGAGAACCCTGATGAAAACAAGACCTTGCCTGTGTT...TCTGTCCTTAATCAGTTCGTACCACATAAGGCAAATGAATGCGAAATGCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR-3UTR CAA 90 bp | AAAAATAGAGCCTTCTTCCTGGTGCCATTTTCATCACAACAGTTGTATTTAGTGGAGACCAATACCGCATaGCAGTCAGTCAAAGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KNRAFFLVPFSSQQLYLVETNTA*QSVKER Trigger: CCTTTCTTTGACTGACTGCAATGCGGTATTGGTCTC...CACTAAATACAACTGTTGTGATGAAAATGGCACCAGGAAGAAGGCTCTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR TCA 72 bp | TGCATTTCGCATTCATTTGCCTTATGTGGTACGAACTaGTTAAGGACAGACACCCAAACCATAGAAAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: CISHSFALCGTN*LRTDTQTIENS Trigger: ACTGTTTTCTATGGTTTGGGTGTCTGTCCTTAATCAGTTCGTACCACATAAGGCAAATGAATGCGAAATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR TCA 72 bp | CATCTTAAAATAGTAAGTAAGGAGACTGCTTGGTTCTaGACATTAGAACACCATACTGAGCAAGTCCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HLKIVSKETAWF*TLEHHTEQVPP Trigger: TGGAGGGACTTGCTCAGTATGGTGTTCTAATGTTCAGAACCAAGCAGTCTCCTTACTTACTATTTTAAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | TGGAAACAAGGCGTTCAGAGGCCTGGGCTTCTCCCGAGGGCTTGGACTCCTAGATCTGACTTGTCAACCTaGGCTTGGGAGGCCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WKQGVQRPGLLPRAWTPRSDLST*AWEACC Trigger: ACAGCAGGCCTCCCAAGCCCAGGTTGACAAGTCAGA...TCTAGGAGTCCAAGCCCTCGGGAGAAGCCCAGGCCTCTGAACGCCTTGTTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR TCA 90 bp | GCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTCAGGGTGGGGAAGGACCAGCCACACACTGTaGGGCCGAACTAGGCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ADGNYILEGMCQDSGWGRTSHTL*GRTRPV Trigger: TACCGGCCTAGTTCGGCCTCACAGTGTGTGGCTGGT...CCTTCCCCACCCTGAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR TCA 90 bp | TGGAAACAAGGCGTTCAGAGGCCTGGGCTTCTCCCGAGGGCTTGGACTCCTAGATTAACAGGGAGGCCATaGCCACATCAGAGATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WKQGVQRPGLLPRAWTPRLTGRP*PHQRSA Trigger: TGCAGATCTCTGATGTGGTCATGGCCTCCCTGTTAA...TCTAGGAGTCCAAGCCCTCGGGAGAAGCCCAGGCCTCTGAACGCCTTGTTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | TGGAAACAAGGCGTTCAGAGGCCTGGGCTTCTCCCGAGGGCTTGGACTCCTAGAGCCGGTACGTTTCTGTaGCCAACGTCTGCAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: WKQGVQRPGLLPRAWTPRAGTFL*PTSAKH Trigger: ATGTTTTGCAGACGTTGGGCACAGAAACGTACCGGC...TCTAGGAGTCCAAGCCCTCGGGAGAAGCCCAGGCCTCTGAACGCCTTGTTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | TGGAAACAAGGCGTTCAGAGGCCTGGGCTTCTCCCGAGGGCTTGGACTCCTAGAAACCTGACTGTTTCCTaGGTTTGCCAGCACTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WKQGVQRPGLLPRAWTPRNLTVS*VCQHSG Trigger: TCCAGAGTGCTGGCAAACCCAGGAAACAGTCAGGTT...TCTAGGAGTCCAAGCCCTCGGGAGAAGCCCAGGCCTCTGAACGCCTTGTTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | TGGAAACAAGGCGTTCAGAGGCCTGGGCTTCTCCCGAGGGCTTGGACTCCTAGACAGACAATAGGTGGCTaGTTCTTCTTGATCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WKQGVQRPGLLPRAWTPRQTIGG*FFLIIS Trigger: GCTGATGATCAAGAAGAACCAGCCACCTATTGTCTG...TCTAGGAGTCCAAGCCCTCGGGAGAAGCCCAGGCCTCTGAACGCCTTGTTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR TCA 90 bp | TCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGGGTTCCCTGGGCTCAGCACTaGGGCCCTCAATCAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: SLEQNTTKHRQGLVFIRVPWAQH*GPQSDT Trigger: AGTGTCTGATTGAGGGCCTCAGTGCTGAGCCCAGGG...AACCCTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | AACCAGTGCAGAATAGAACAGCAAGGCACCAAGACCACAATCCAATCAGCCCATGAGGCACACCCCAGCTaGTTTGCAAGGGTTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NQCRIEQQGTKTTIQSAHEAHPS*FARVPV Trigger: GACTGGAACCCTTGCAAAGCAGCTGGGGTGTGCCTC...ATGGGCTGATTGGATTGTGGTCTTGGTGCCTTGCTGTTCTATTCTGCACTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGGCACCAAGACCACAATCCAATCAGCCCATTTCCTCCTCTCGAGCACTTCCTTCCTCATCCCCTaGATTATGGCAGTCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QQGTKTTIQSAHFLLSSTSFLIP*IMAVRI Trigger: GATCCTGACTGCCATAATCCAGGGGATGAGGAAGGA...AGTGCTCGAGAGGAGGAAATGGGCTGATTGGATTGTGGTCTTGGTGCCTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR TCA 90 bp | CACACTGTCTTAGTGGTTAGTTGGTTTGGAGTGCAGCAAGAGACCAATACCGCAGCAACTCTGGCAACCTaGCTGTTTCCTGGGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTVLVVSWFGVQQETNTAATLAT*LFPGFA Trigger: GGCAAACCCAGGAAACAGTCAGGTTGCCAGAGTTGC...TGCGGTATTGGTCTCTTGCTGCACTCCAAACCAACTAACCACTAAGACAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | AACCAGTGCAGAATAGAACAGCAAGGCACCAAGACCACAATCCAATCAGCCCATCCTCAGTTCCTTGGTTaGCCACGTAGCGAGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NQCRIEQQGTKTTIQSAHPQFLG*PRSEGL Trigger: AAGACCCTCGCTACGTGGGCAACCAAGGAACTGAGG...ATGGGCTGATTGGATTGTGGTCTTGGTGCCTTGCTGTTCTATTCTGCACTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGGCACCAAGACCACAATCCAATCAGCCCATTTCCTCCTCTCGAGCACTTCATCCCCTGGATTATaGCAGTCAGGATCTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: QQGTKTTIQSAHFLLSSTSSPGL*QSGSHW Trigger: CCAATGAGATCCTGACTGCCATAATCCAGGGGATGA...AGTGCTCGAGAGGAGGAAATGGGCTGATTGGATTGTGGTCTTGGTGCCTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGGCACCAAGACCACAATCCAATCAGCCCATTTCCTCCTCTCGAGCACTCAGTTGATTAGGCTCTaGTCCTTCCAAGATACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QQGTKTTIQSAHFLLSSTQLIRL*SFQDTA Trigger: GGCAGTATCTTGGAAGGACCAGAGCCTAATCAACTG...AGTGCTCGAGAGGAGGAAATGGGCTGATTGGATTGTGGTCTTGGTGCCTTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | ATCCAATCAGCCCATTTCCTCCTCTCGAGCACTGAATGCATCTGGGAGAAAGGATTGTCAACCTGGGCTTaGGAGGCCTGCTGTAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IQSAHFLLSSTECIWEKGLSTWA*EACCRV Trigger: TACTCTACAGCAGGCCTCCCAAGCCCAGGTTGACAA...TCCTTTCTCCCAGATGCATTCAGTGCTCGAGAGGAGGAAATGGGCTGATTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR TCA 90 bp | CACACTGTCTTAGTGGTTAGTTGGTTTGGAGTGCAGCAAGAGACCAATACCGCAACATTGGCTACCAGCTaGGGAATTAGCTCTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTVLVVSWFGVQQETNTATLATS*GISSGH Trigger: GTGGCCAGAGCTAATTCCTCAGCTGGTAGCCAATGT...TGCGGTATTGGTCTCTTGCTGCACTCCAAACCAACTAACCACTAAGACAGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR TCA 90 bp | CACACTGTCTTAGTGGTTAGTTGGTTTGGAGTGCAGCAAGAGACCAATACCGCATTGCTCTGCTGCCTCTaGAGCCTCAATGGCCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: HTVLVVSWFGVQQETNTALLCCL*SLNGQI Trigger: GATTTGGCCATTGAGGCTTCAGAGGCAGCAGAGCAA...TGCGGTATTGGTCTCTTGCTGCACTCCAAACCAACTAACCACTAAGACAGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | CAGCAAGGCACCAAGACCACAATCCAATCAGCCCATTTCCTCCTCTCGAGCACTGTGGACTCTTTCATATaGTCTGTGCTGTTGGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQGTKTTIQSAHFLLSSTVDSFI*SVLLGF Trigger: AAACCCCAACAGCACAGAGCATATGAAAGAGTCCAC...AGTGCTCGAGAGGAGGAAATGGGCTGATTGGATTGTGGTCTTGGTGCCTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | AACCAGTGCAGAATAGAACAGCAAGGCACCAAGACCACAATCCAATCAGCCCATACACCCCAGCTGCTTTaGAAGGGTTCCAGTCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: NQCRIEQQGTKTTIQSAHTPQLL*KGSSHR Trigger: ACGATGACTGGAACCCTTGCAAAGCAGCTGGGGTGT...ATGGGCTGATTGGATTGTGGTCTTGGTGCCTTGCTGTTCTATTCTGCACTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGGATTAGTAACAGCACTTGTCAACTGCTTCCCTGGAACAGAACACGACGCCAAAAGCCATCACTaGTGCATCCCGGTATCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKGLVTALVNCFPGTEHDAKSHH*CIPVSP Trigger: TGGCGATACCGGGATGCAGCAGTGATGGCTTTTGGC...GTCGTGTTCTGTTCCAGGGAAGCAGTTGACAAGTGCTGTTACTAATCCTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | ATCCAATCAGCCCATTTCCTCCTCTCGAGCACTGAATGCATCTGGGAGAAAGGACATCGGGTCTGTCGGTaGTCTCCAATAGCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IQSAHFLLSSTECIWEKGHRVCR*SPIASE Trigger: TTCAGAAGCTATTGGAGACCACCGACAGACCCGATG...TCCTTTCTCCCAGATGCATTCAGTGCTCGAGAGGAGGAAATGGGCTGATTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | GCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTCAGGGTGGGGAAGGTGGAGGTCATTGAACTaGATTCTGTCGGATGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ADGNYILEGMCQDSGWGRWRSLN*ILSDVL Trigger: GAGCACATCCGACAGAATCCAGTTCAATGACCTCCA...CCTTCCCCACCCTGAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR CAA 72 bp | AGTTGGTTTGGAGTGCAGCAAGAGACCAATACCGCATaGCAGTCAGTCAAAGAAAGGGACAGAAGGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWFGVQQETNTA*QSVKERDRRPS Trigger: GCTTGGCCTTCTGTCCCTTTCTTTGACTGACTGCAATGCGGTATTGGTCTCTTGCTGCACTCCAAACCAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR TCA 90 bp | AACCAGTGCAGAATAGAACAGCAAGGCACCAAGACCACAATCCAATCAGCCCATATCTGCAGAGCATCTTaGTGCTGCACTTTCCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NQCRIEQQGTKTTIQSAHICRAS*CCTFRR Trigger: TCTCCGGAAAGTGCAGCATCAAGATGCTCTGCAGAT...ATGGGCTGATTGGATTGTGGTCTTGGTGCCTTGCTGTTCTATTCTGCACTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR TCA 90 bp | CACACTGTCTTAGTGGTTAGTTGGTTTGGAGTGCAGCAAGAGACCAATACCGCAAGGCCTCCATGTACTTaGGGAATTCACCACCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: HTVLVVSWFGVQQETNTARPPCT*GIHHPT Trigger: TGTTGGGTGGTGAATTCCTCAAGTACATGGAGGCCT...TGCGGTATTGGTCTCTTGCTGCACTCCAAACCAACTAACCACTAAGACAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR TCA 90 bp | TGCTTCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGGGGTGTACGTTTTCCTaGTCTCCCTTCAATCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CFPGTEHDKTQARSCFHQGCTFS*SPFNPW Trigger: CCAGGGATTGAAGGGAGATCAGGAAAACGTACACCC...CTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | CACACTGTCTTAGTGGTTAGTTGGTTTGGAGTGCAGCAAGAGACCAATACCGCAACTGTTTCCTGGGTTTaGCAGCACTCTGGACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTVLVVSWFGVQQETNTATVSWV*QHSGQF Trigger: GAACTGTCCAGAGTGCTGGCAAACCCAGGAAACAGT...TGCGGTATTGGTCTCTTGCTGCACTCCAAACCAACTAACCACTAAGACAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGAAAAGCCATCACTGCTaGATCCCGGTATCGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CFPGTEHDKTQARSCFHQKSHHC*IPVSPV Trigger: GACTGGCGATACCGGGATGCAGCAGTGATGGCTTTT...CTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | AACCAGTGCAGAATAGAACAGCAAGGCACCAAGACCACAATCCAATCAGCCCATTTCTCCAGGAGCAGCTaGATCACCTCGTCACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NQCRIEQQGTKTTIQSAHFSRSS*ITSSQK Trigger: TTTCTGTGACGAGGTGATGCAGCTGCTCCTGGAGAA...ATGGGCTGATTGGATTGTGGTCTTGGTGCCTTGCTGTTCTATTCTGCACTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | TGCTTCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGGACCAGCTGCAACTCTaGCAACCTGACTGTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CFPGTEHDKTQARSCFHQDQLQL*QPDCFL Trigger: CAGGAAACAGTCAGGTTGCCAGAGTTGCAGCTGGTC...CTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR TCA 90 bp | CACCATTTTACTAATCTTCAACTTCAGTGGAAAAATAGAGCCTTCTTCCTGGTGAGCCCAGCACACATTTaGAGCCACCCTGGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HHFTNLQLQWKNRAFFLVSPAHI*SHPGLS Trigger: GCTGAGCCCAGGGTGGCTTCAAATGTGTGCTGGGCT...CACCAGGAAGAAGGCTCTATTTTTCCACTGAAGTTGAAGATTAGTAAAATGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR TCA 90 bp | TGCTTCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGGAGACTGGAGGTCATTaGACTGGATTCTGTCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CFPGTEHDKTQARSCFHQETGGH*TGFCRM Trigger: CATCCGACAGAATCCAGTTCAATGACCTCCAGTCTC...CTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGGATTAGTAACAGCACTTGTCAACTGCTTCCCTGGAACAGAACACGACCCCCAGACCCAGCTGTaGTTTGGAACATCCTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: EKGLVTALVNCFPGTEHDPQTQL*FGTSLT Trigger: TGTTAAGGATGTTCCAAAGCACAGCTGGGTCTGGGG...GTCGTGTTCTGTTCCAGGGAAGCAGTTGACAAGTGCTGTTACTAATCCTTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGGATTAGTAACAGCACTTGTCAACTGCTTCCCTGGAACAGAACACGACCACCAGTGTGCTAACTaGCATCAGGGCATCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EKGLVTALVNCFPGTEHDHQCAN*HQGIFL Trigger: CAAGAAGATGCCCTGATGGCAGTTAGCACACTGGTG...GTCGTGTTCTGTTCCAGGGAAGCAGTTGACAAGTGCTGTTACTAATCCTTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | TCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGGGTTGCGAGCCACCTCTGCTaGTATTGTGCCTTGATATCT | + |
|
Preference number: 4 (lower is better) Translates to: SLEQNTTKHRQGLVFIRVASHLC*YCALIS Trigger: AGATATCAAGGCACAATACCAGCAGAGGTGGCTCGC...AACCCTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | AACCAGTGCAGAATAGAACAGCAAGGCACCAAGACCACAATCCAATCAGCCCATACTGCAGTGCTCCCTTaGCGTAAAATTTGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NQCRIEQQGTKTTIQSAHTAVLP*RKICWC Trigger: ACACCAGCAAATTTTACGCCAAGGGAGCACTGCAGT...ATGGGCTGATTGGATTGTGGTCTTGGTGCCTTGCTGTTCTATTCTGCACTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAAGGATTAGTAACAGCACTTGTCAACTGCTTCCCTGGAACAGAACACGACGACCCAGCTGTGCTTTaGAACATCCTTAACAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EKGLVTALVNCFPGTEHDDPAVL*NILNRE Trigger: CTCCCTGTTAAGGATGTTCCAAAGCACAGCTGGGTC...GTCGTGTTCTGTTCCAGGGAAGCAGTTGACAAGTGCTGTTACTAATCCTTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGATAGCGAGCCACCTCTaGTGGTATTGTGCCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: CFPGTEHDKTQARSCFHQIASHL*WYCALI Trigger: TATCAAGGCACAATACCAGCAGAGGTGGCTCGCTAT...CTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGGATTAGTAACAGCACTTGTCAACTGCTTCCCTGGAACAGAACACGACTGGGCTTGGGAGGCCTaGTGTAGAGTATTCAATACA | + |
|
Preference number: 4 (lower is better) Translates to: EKGLVTALVNCFPGTEHDWAWEA*CRVFNT Trigger: TGTATTGAATACTCTACAGCAGGCCTCCCAAGCCCA...GTCGTGTTCTGTTCCAGGGAAGCAGTTGACAAGTGCTGTTACTAATCCTTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAAGGATTAGTAACAGCACTTGTCAACTGCTTCCCTGGAACAGAACACGACTCTTACCCTTGTGTCTaGACACTGTGTGGCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: EKGLVTALVNCFPGTEHDSYPCV*TLCGFT Trigger: TGTGAAGCCACACAGTGTCCAGACACAAGGGTAAGA...GTCGTGTTCTGTTCCAGGGAAGCAGTTGACAAGTGCTGTTACTAATCCTTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | TGCTTCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGCAGAACTCTATCCCTTaGAGAGCCACCTCATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: CFPGTEHDKTQARSCFHQQNSIP*RATSSM Trigger: CATTGATGAGGTGGCTCTCCAAGGGATAGAGTTCTG...CTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR TCA 90 bp | TCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGGGTTGCTGGTATTGTGCCTTaGTATCTGGATCTTTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLEQNTTKHRQGLVFIRVAGIVP*YLDLSM Trigger: CATCGAAAGATCCAGATATCAAGGCACAATACCAGC...AACCCTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR TCA 90 bp | TGCTTCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGTCTTTACGATTTCCATaGGAGACTCATACGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CFPGTEHDKTQARSCFHQSLRFP*ETHTQS Trigger: GCTCTGCGTATGAGTCTCTCATGGAAATCGTAAAGA...CTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGGACTTATCCTGTAGCTaGTCTGGGTCTATATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CFPGTEHDKTQARSCFHQDLSCS*SGSISW Trigger: CCAAGATATAGACCCAGAGCAGCTACAGGATAAGTC...CTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | GCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTCAGGGTGGGGAAGGACTTGCATGATAAAGTaGCTTTCAGACTCTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ADGNYILEGMCQDSGWGRTCMIK*LSDSLS Trigger: TGACAAAGAGTCTGAAAGGCACTTTATCATGCAAGT...CCTTCCCCACCCTGAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | TGCTTCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGTCCAATGCCCAGGAATaGTTTAAAGGCCTCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: CFPGTEHDKTQARSCFHQSNAQE*FKGLHV Trigger: TACATGGAGGCCTTTAAACCATTCCTGGGCATTGGA...CTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR TCA 90 bp | GAGAAAGGATTAGTAACAGCACTTGTCAACTGCTTCCCTGGAACAGAACACGACTCATTGCTTCAATTGTaGTTGCAAAAAGGGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EKGLVTALVNCFPGTEHDSLLQL*LQKGQD Trigger: GTCCTGCCCTTTTTGCAATCACAATTGAAGCAATGA...GTCGTGTTCTGTTCCAGGGAAGCAGTTGACAAGTGCTGTTACTAATCCTTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | CACCATTTTACTAATCTTCAACTTCAGTGGAAAAATAGAGCCTTCTTCCTGGTGGGCAAGATGTTAGACTaGAGGGCTCGGCACAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HHFTNLQLQWKNRAFFLVGKMLD*RARHKS Trigger: AGACTTGTGCCGAGCCCTGCAGTCTAACATCTTGCC...CACCAGGAAGAAGGCTCTATTTTTCCACTGAAGTTGAAGATTAGTAAAATGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | AGAATGCATTTCGCATTCATTTGCCTTATGTGGTACGAACTGATTAAGGACAGAGGTTTGCCAGCACTCTaGACAGTTCCACAAGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: RMHFAFICLMWYELIKDRGLPAL*TVPQGT Trigger: CGTTCCTTGTGGAACTGTCCAGAGTGCTGGCAAACC...TCTGTCCTTAATCAGTTCGTACCACATAAGGCAAATGAATGCGAAATGCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| 3UTR CAA 72 bp | AAATTAACCAATGTAATTGGTGCAGGCAGATGCCACTaGTGGCAAACCCAAGTCTATCCGATGCCCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLTNVIGAGRCH*WQTQVYPMPIF Trigger: GAAAATGGGCATCGGATAGACTTGGGTTTGCCACAAGTGGCATCTGCCTGCACCAATTACATTGGTTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | CACCATTTTACTAATCTTCAACTTCAGTGGAAAAATAGAGCCTTCTTCCTGGTGGCTTCACAGACCACTTaGATGATAAAGTGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HHFTNLQLQWKNRAFFLVASQTT*MIKCLS Trigger: TGAAAGGCACTTTATCATGCAAGTGGTCTGTGAAGC...CACCAGGAAGAAGGCTCTATTTTTCCACTGAAGTTGAAGATTAGTAAAATGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | AGAATGCATTTCGCATTCATTTGCCTTATGTGGTACGAACTGATTAAGGACAGATGCTTCAATTGTGATTaGAAAAAGGGCAGGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RMHFAFICLMWYELIKDRCFNCD*KKGRTH Trigger: ATGGGTCCTGCCCTTTTTGCAATCACAATTGAAGCA...TCTGTCCTTAATCAGTTCGTACCACATAAGGCAAATGAATGCGAAATGCATTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | AAAAATAGAGCCTTCTTCCTGGTGCCATTTTCATCACAACAGTTGTATTTAGTGCACCAAGTACTGCAGTaGTCCCTTGGCGTAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: KNRAFFLVPFSSQQLYLVHQVLQ*SLGVKF Trigger: AAATTTTACGCCAAGGGAGCACTGCAGTACTTGGTG...CACTAAATACAACTGTTGTGATGAAAATGGCACCAGGAAGAAGGCTCTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | AGAATGCATTTCGCATTCATTTGCCTTATGTGGTACGAACTGATTAAGGACAGAATAAAGGGAAGGACATaGGGCACAATGTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RMHFAFICLMWYELIKDRIKGRT*GTMSSS Trigger: TGAAGATGACATTGTGCCGCATGTCCTTCCCTTTAT...TCTGTCCTTAATCAGTTCGTACCACATAAGGCAAATGAATGCGAAATGCATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | AAAAATAGAGCCTTCTTCCTGGTGCCATTTTCATCACAACAGTTGTATTTAGTGCCTCTGCTGGTATTGTaGCTTGATATCTGGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KNRAFFLVPFSSQQLYLVPLLVL*LDIWIF Trigger: AAAGATCCAGATATCAAGGCACAATACCAGCAGAGG...CACTAAATACAACTGTTGTGATGAAAATGGCACCAGGAAGAAGGCTCTATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | CACCATTTTACTAATCTTCAACTTCAGTGGAAAAATAGAGCCTTCTTCCTGGTGCTCGAACAACTACACTaGGGTCTTTCATTAGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HHFTNLQLQWKNRAFFLVLEQLH*GLSLVL Trigger: TAGAACTAATGAAAGACCCCAGTGTAGTTGTTCGAG...CACCAGGAAGAAGGCTCTATTTTTCCACTGAAGTTGAAGATTAGTAAAATGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR GCA 90 bp | AAAAATAGAGCCTTCTTCCTGGTGCCATTTTCATCACAACAGTTGTATTTAGTGTCAGGGTTCTTGATGTaGTCTTTAATAAAGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNRAFFLVPFSSQQLYLVSGFLM*SLIKGR Trigger: CCTTCCCTTTATTAAAGAGCACATCAAGAACCCTGA...CACTAAATACAACTGTTGTGATGAAAATGGCACCAGGAAGAAGGCTCTATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR TCA 90 bp | AAAAATAGAGCCTTCTTCCTGGTGCCATTTTCATCACAACAGTTGTATTTAGTGGTCTCCAATAGCTTCTaGACTATAAGTTCAAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KNRAFFLVPFSSQQLYLVVSNSF*TISSKE Trigger: TTCCTTTGAACTTATAGTTCAGAAGCTATTGGAGAC...CACTAAATACAACTGTTGTGATGAAAATGGCACCAGGAAGAAGGCTCTATTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CCA 90 bp | AAAAATAGAGCCTTCTTCCTGGTGCCATTTTCATCACAACAGTTGTATTTAGTGTTGTGCCTTGATATCTaGATCTTTCGATGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNRAFFLVPFSSQQLYLVLCLDI*IFRCQR Trigger: TCTTTGACATCGAAAGATCCAGATATCAAGGCACAA...CACTAAATACAACTGTTGTGATGAAAATGGCACCAGGAAGAAGGCTCTATTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | TGGAAACAAGGCGTTCAGAGGCCTGGGCTTCTCCCGAGGGCTTGGACTCCTAGAGATCTGCAGAGCATCTaGATGCTGCACTTTCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WKQGVQRPGLLPRAWTPRDLQSI*MLHFPE Trigger: CTCCGGAAAGTGCAGCATCAAGATGCTCTGCAGATC...TCTAGGAGTCCAAGCCCTCGGGAGAAGCCCAGGCCTCTGAACGCCTTGTTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS CCA 90 bp | GCCATCAGGGCATCTTCTTGCACTCCCCCAGACCCAGCTGTGCTTTaGAACATCCTTAACAGGGAGGCCATGACCACATCAGAGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AIRASSCTPPDPAVL*NILNREAMTTSEIC Trigger: GCAGATCTCTGATGTGGTCATGGCCTCCCTGTTAAGGATGTTCCAAAGCACAGCTGGGTCTGGGGGAGTGCAAGAAGATGCCCTGATGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS GCA 90 bp | GTCATCTTCACAGCAGGTGGACAGGAGCATGAGGCACACCCCAGCTaGTTTGCAAGGGTTCCAGTCATCGTCGTCATCGTTTTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VIFTAGGQEHEAHPS*FARVPVIVVIVFIL Trigger: CAGGATGAAAACGATGACGACGATGACTGGAACCCTTGCAAAGCAGCTGGGGTGTGCCTCATGCTCCTGTCCACCTGCTGTGAAGATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS GCA 90 bp | CCCAACACTTCCACCAGTGTGCTAACTGCCATCAGGGCATCTTCTTaGACTCCCCCAGACCCAGCTGTGCTTTGGAACATCCTTAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PNTSTSVLTAIRASS*TPPDPAVLWNILNR Trigger: CCTGTTAAGGATGTTCCAAAGCACAGCTGGGTCTGGGGGAGTGCAAGAAGATGCCCTGATGGCAGTTAGCACACTGGTGGAAGTGTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS TCA 90 bp | CCCCAGACCCAGCTGTGCTTTGGAACATCCTTAACAGGGAGGCCATaGCCACATCAGAGATCTGCAGAGCATCTTGATGCTGCACTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PQTQLCFGTSLTGRP*PHQRSAEHLDAALS Trigger: GGAAAGTGCAGCATCAAGATGCTCTGCAGATCTCTGATGTGGTCATGGCCTCCCTGTTAAGGATGTTCCAAAGCACAGCTGGGTCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS TCA 90 bp | TTGAACTGGATTCTGTCGGATGTGCTCTGGATATGGGACTCCATCTaGAGCACCTGCTGCAGCCGTTCCATAATGACCAGGGTGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LNWILSDVLWIWDSI*STCCSRSIMTRVVF Trigger: GAAGACCACCCTGGTCATTATGGAACGGCTGCAGCAGGTGCTTCAGATGGAGTCCCATATCCAGAGCACATCCGACAGAATCCAGTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | GCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTCAGGGTGGGGAAGGGACTGTTTCCTGGGTTaGCCAGCACTCTGGACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ADGNYILEGMCQDSGWGRDCFLG*PALWTV Trigger: AACTGTCCAGAGTGCTGGCAAACCCAGGAAACAGTC...CCTTCCCCACCCTGAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | CAGCAAGGCACCAAGACCACAATCCAATCAGCCCATTTCCTCCTCTCGAGCACTGGTGGCTGGTTCTTCTaGATCATCAGCTACATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QQGTKTTIQSAHFLLSSTGGWFF*IISYIC Trigger: GCAGATGTAGCTGATGATCAAGAAGAACCAGCCACC...AGTGCTCGAGAGGAGGAAATGGGCTGATTGGATTGTGGTCTTGGTGCCTTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS CCA 90 bp | GCAGCCAGCTTCACATTGTTACTAGGCTCCTCCTTCCTCATCCCCTaGATTATGGCAGTCAGGATCTCATTGGACTTATCCTGTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AASFTLLLGSSFLIP*IMAVRISLDLSCSC Trigger: GCAGCTACAGGATAAGTCCAATGAGATCCTGACTGCCATAATCCAGGGGATGAGGAAGGAGGAGCCTAGTAACAATGTGAAGCTGGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | GCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTCAGGGTGGGGAAGGCCAGAACTCTATCCCTaGGAGAGCCACCTCATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ADGNYILEGMCQDSGWGRPELYP*ESHLIN Trigger: ATTGATGAGGTGGCTCTCCAAGGGATAGAGTTCTGG...CCTTCCCCACCCTGAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | TCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGGGTTCACACCCCAGCTGCTTaGCAAGGGTTCCAGTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: SLEQNTTKHRQGLVFIRVHTPAA*QGFQSS Trigger: CGATGACTGGAACCCTTGCAAAGCAGCTGGGGTGTG...AACCCTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | ATCCAATCAGCCCATTTCCTCCTCTCGAGCACTGAATGCATCTGGGAGAAAGGACCACAGTCCACGCTGTaGTGTCTCGAACAACTACAC | + |
|
Preference number: 5 (lower is better) Translates to: IQSAHFLLSSTECIWEKGPQSTL*CLEQLH Trigger: GTGTAGTTGTTCGAGACACAACAGCGTGGACTGTGG...TCCTTTCTCCCAGATGCATTCAGTGCTCGAGAGGAGGAAATGGGCTGATTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | TGCTTCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGAAGCCCAGCACACATTaGAAGCCACCCTGGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CFPGTEHDKTQARSCFHQKPSTH*KPPWAQ Trigger: CTGAGCCCAGGGTGGCTTCAAATGTGTGCTGGGCTT...CTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS TCA 90 bp | GGAGAACATTCTGAAGAGTCGCGCAGAGTAGAGACTGGAGGTCATTaGACTGGATTCTGTCGGATGTGCTCTGGATATGGGACTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GEHSEESRRVETGGH*TGFCRMCSGYGTPS Trigger: AGATGGAGTCCCATATCCAGAGCACATCCGACAGAATCCAGTTCAATGACCTCCAGTCTCTACTCTGCGCGACTCTTCAGAATGTTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | GCAGACGGTAACTACATTCTTGAAGGAATGTGCCAAGACTCAGGGTGGGGAAGGGGCTTCACAGACCACTaGCATGATAAAGTGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ADGNYILEGMCQDSGWGRGFTDH*HDKVPF Trigger: GAAAGGCACTTTATCATGCAAGTGGTCTGTGAAGCC...CCTTCCCCACCCTGAGTCTTGGCACATTCCTTCAAGAATGTAGTTACCGTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | TGCTTCCCTGGAACAGAACACGACAAAACACAGGCAAGGTCTTGTTTTCATCAGCAGCCACTCTTACCCTaGTGTCTGGACACTGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CFPGTEHDKTQARSCFHQQPLLP*CLDTVW Trigger: CCACACAGTGTCCAGACACAAGGGTAAGAGTGGCTG...CTGATGAAAACAAGACCTTGCCTGTGTTTTGTCGTGTTCTGTTCCAGGGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | GAGAAAGGATTAGTAACAGCACTTGTCAACTGCTTCCCTGGAACAGAACACGACAGTTTCCTCAGTTCCTaGGTTGCCCACGTAGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EKGLVTALVNCFPGTEHDSFLSS*VAHVAR Trigger: CCTCGCTACGTGGGCAACCAAGGAACTGAGGAAACT...GTCGTGTTCTGTTCCAGGGAAGCAGTTGACAAGTGCTGTTACTAATCCTTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS CCA 90 bp | GCTCCTCCTTCCTCATCCCCTGGATTATGGCAGTCAGGATCTCATTaGACTTATCCTGTAGCTGCTCTGGGTCTATATCTTGGCAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: APPSSSPGLWQSGSH*TYPVAALGLYLGKC Trigger: ACATTTGCCAAGATATAGACCCAGAGCAGCTACAGGATAAGTCCAATGAGATCCTGACTGCCATAATCCAGGGGATGAGGAAGGAGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | ATCCAATCAGCCCATTTCCTCCTCTCGAGCACTGAATGCATCTGGGAGAAAGGACGCCAGTCAGGGTTCTaGATGTGCTCTTTAATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IQSAHFLLSSTECIWEKGRQSGF*MCSLIK Trigger: CTTTATTAAAGAGCACATCAAGAACCCTGACTGGCG...TCCTTTCTCCCAGATGCATTCAGTGCTCGAGAGGAGGAAATGGGCTGATTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS GCA 90 bp | TTCTTGACTTCCCGTCGAGCATTAGCATCAATAGCGAGCCACCTCTaGTGGTATTGTGCCTTGATATCTGGATCTTTCGATGTCAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLTSRRALASIASHL*WYCALISGSFDVKE Trigger: CTCTTTGACATCGAAAGATCCAGATATCAAGGCACAATACCAGCAGAGGTGGCTCGCTATTGATGCTAATGCTCGACGGGAAGTCAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS CCA 90 bp | TTGACTTCCCGTCGAGCATTAGCATCAATAGCGAGCCACCTCTGCTaGTATTGTGCCTTGATATCTGGATCTTTCGATGTCAAAGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LTSRRALASIASHLC*YCALISGSFDVKEF Trigger: GAACTCTTTGACATCGAAAGATCCAGATATCAAGGCACAATACCAGCAGAGGTGGCTCGCTATTGATGCTAATGCTCGACGGGAAGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | CACACTGTCTTAGTGGTTAGTTGGTTTGGAGTGCAGCAAGAGACCAATACCGCATGCTGGTATTGTGCCTaGATATCTGGATCTTTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: HTVLVVSWFGVQQETNTACWYCA*ISGSFD Trigger: ATCGAAAGATCCAGATATCAAGGCACAATACCAGCA...TGCGGTATTGGTCTCTTGCTGCACTCCAAACCAACTAACCACTAAGACAGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | CACACTGTCTTAGTGGTTAGTTGGTTTGGAGTGCAGCAAGAGACCAATACCGCACTCTGGGTCTATATCTaGGCAAATGTAACCAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: HTVLVVSWFGVQQETNTALWVYI*ANVTNS Trigger: GCTATTGGTTACATTTGCCAAGATATAGACCCAGAG...TGCGGTATTGGTCTCTTGCTGCACTCCAAACCAACTAACCACTAAGACAGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | CACCATTTTACTAATCTTCAACTTCAGTGGAAAAATAGAGCCTTCTTCCTGGTGAAGGCCTCCATGTACTaGAGGAATTCACCACCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HHFTNLQLQWKNRAFFLVKASMY*RNSPPN Trigger: GTTGGGTGGTGAATTCCTCAAGTACATGGAGGCCTT...CACCAGGAAGAAGGCTCTATTTTTCCACTGAAGTTGAAGATTAGTAAAATGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | AAAAATAGAGCCTTCTTCCTGGTGCCATTTTCATCACAACAGTTGTATTTAGTGCCACCTCTGCTGGTATaGTGCCTTGATATCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: KNRAFFLVPFSSQQLYLVPPLLV*CLDIWI Trigger: GATCCAGATATCAAGGCACAATACCAGCAGAGGTGG...CACTAAATACAACTGTTGTGATGAAAATGGCACCAGGAAGAAGGCTCTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | AAAAATAGAGCCTTCTTCCTGGTGCCATTTTCATCACAACAGTTGTATTTAGTGATGTCAAAGTCTGACTaGTCAACCTGGGCTTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KNRAFFLVPFSSQQLYLVMSKSD*STWAWE Trigger: CTCCCAAGCCCAGGTTGACAAGTCAGACTTTGACAT...CACTAAATACAACTGTTGTGATGAAAATGGCACCAGGAAGAAGGCTCTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS-3UTR CAA 90 bp | AAAAATAGAGCCTTCTTCCTGGTGCCATTTTCATCACAACAGTTGTATTTAGTGTGCCTTTCAGACTCTTaGTCAAAGTTTGCTTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KNRAFFLVPFSSQQLYLVCLSDS*SKFALV Trigger: CACCAAAGCAAACTTTGACAAAGAGTCTGAAAGGCA...CACTAAATACAACTGTTGTGATGAAAATGGCACCAGGAAGAAGGCTCTATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS GCA 72 bp | ACAGCAGGTGGACAGGAGCATGAGGCACACCCCAGCTaGTTTGCAAGGGTTCCAGTCATCGTCGTCATCGTT | + |
|
Preference number: 6 (lower is better) Translates to: TAGGQEHEAHPS*FARVPVIVVIV Trigger: AACGATGACGACGATGACTGGAACCCTTGCAAAGCAGCTGGGGTGTGCCTCATGCTCCTGTCCACCTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS TCA 72 bp | TCAGACACTGTAAAAGGGGTGCCAGGTAGACATCGTTaGTGGCGGCTTCAGGCAGCAGCTCACAGATCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SDTVKGVPGRHR*WRLQAAAHRSC Trigger: GCAGGATCTGTGAGCTGCTGCCTGAAGCCGCCATCAACGATGTCTACCTGGCACCCCTTTTACAGTGTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS GCA 72 bp | CAGTGTCTGTGTGAGGATGGGCACCAAGTACTGCAGTaGTCCCTTGGCGTAAAATTTGCTGGTGTGCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: QCLCEDGHQVLQ*SLGVKFAGVLR Trigger: CCGGAGCACACCAGCAAATTTTACGCCAAGGGAGCACTGCAGTACTTGGTGCCCATCCTCACACAGACACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS GCA 72 bp | GAATTCACCACCCAACACTTCCACCAGTGTGCTAACTaGCATCAGGGCATCTTCTTGCACTCCCCCAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: EFTTQHFHQCAN*HQGIFLHSPRP Trigger: GGGTCTGGGGGAGTGCAAGAAGATGCCCTGATGGCAGTTAGCACACTGGTGGAAGTGTTGGGTGGTGAATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS CAA 72 bp | CAGGTGGACAGGAGCATGAGGCACACCCCAGCTGCTTaGCAAGGGTTCCAGTCATCGTCGTCATCGTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QVDRSMRHTPAA*QGFQSSSSSFS Trigger: TGAAAACGATGACGACGATGACTGGAACCCTTGCAAAGCAGCTGGGGTGTGCCTCATGCTCCTGTCCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS CCA 72 bp | GCATCTTCTTGCACTCCCCCAGACCCAGCTGTGCTTTaGAACATCCTTAACAGGGAGGCCATGACCACATCA | + |
|
Preference number: 6 (lower is better) Translates to: ASSCTPPDPAVL*NILNREAMTTS Trigger: TGATGTGGTCATGGCCTCCCTGTTAAGGATGTTCCAAAGCACAGCTGGGTCTGGGGGAGTGCAAGAAGATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS TCA 72 bp | ATTCTGTCGGATGTGCTCTGGATATGGGACTCCATCTaGAGCACCTGCTGCAGCCGTTCCATAATGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ILSDVLWIWDSI*STCCSRSIMTR Trigger: CCTGGTCATTATGGAACGGCTGCAGCAGGTGCTTCAGATGGAGTCCCATATCCAGAGCACATCCGACAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS CAA 90 bp | TCTTCACAGCAGGTGGACAGGAGCATGAGGCACACCCCAGCTGCTTaGCAAGGGTTCCAGTCATCGTCGTCATCGTTTTCATCCTGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSQQVDRSMRHTPAA*QGFQSSSSSFSSCL Trigger: TAAACAGGATGAAAACGATGACGACGATGACTGGAACCCTTGCAAAGCAGCTGGGGTGTGCCTCATGCTCCTGTCCACCTGCTGTGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS TCA 72 bp | TCTGAAGAGTCGCGCAGAGTAGAGACTGGAGGTCATTaGACTGGATTCTGTCGGATGTGCTCTGGATATGGG | + |
|
Preference number: 6 (lower is better) Translates to: SEESRRVETGGH*TGFCRMCSGYG Trigger: CCCATATCCAGAGCACATCCGACAGAATCCAGTTCAATGACCTCCAGTCTCTACTCTGCGCGACTCTTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS CAA 90 bp | GGCTCCTCCTTCCTCATCCCCTGGATTATGGCAGTCAGGATCTCATaGGACTTATCCTGTAGCTGCTCTGGGTCTATATCTTGGCAAATG | + |
|
Preference number: 6 (lower is better) Translates to: GSSFLIPWIMAVRIS*DLSCSCSGSISWQM Trigger: CATTTGCCAAGATATAGACCCAGAGCAGCTACAGGATAAGTCCAATGAGATCCTGACTGCCATAATCCAGGGGATGAGGAAGGAGGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS TCA 72 bp | CAGCTGTGCTTTGGAACATCCTTAACAGGGAGGCCATaGCCACATCAGAGATCTGCAGAGCATCTTGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: QLCFGTSLTGRP*PHQRSAEHLDA Trigger: AGCATCAAGATGCTCTGCAGATCTCTGATGTGGTCATGGCCTCCCTGTTAAGGATGTTCCAAAGCACAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS GCA 72 bp | TCCCGTCGAGCATTAGCATCAATAGCGAGCCACCTCTaGTGGTATTGTGCCTTGATATCTGGATCTTTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: SRRALASIASHL*WYCALISGSFD Trigger: ATCGAAAGATCCAGATATCAAGGCACAATACCAGCAGAGGTGGCTCGCTATTGATGCTAATGCTCGACGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS CCA 72 bp | CGTCGAGCATTAGCATCAATAGCGAGCCACCTCTGCTaGTATTGTGCCTTGATATCTGGATCTTTCGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: RRALASIASHLC*YCALISGSFDV Trigger: GACATCGAAAGATCCAGATATCAAGGCACAATACCAGCAGAGGTGGCTCGCTATTGATGCTAATGCTCGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS CCA 72 bp | TTCACATTGTTACTAGGCTCCTCCTTCCTCATCCCCTaGATTATGGCAGTCAGGATCTCATTGGACTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: FTLLLGSSFLIP*IMAVRISLDLS Trigger: GGATAAGTCCAATGAGATCCTGACTGCCATAATCCAGGGGATGAGGAAGGAGGAGCCTAGTAACAATGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS CAA 90 bp | TTCCCGTCGAGCATTAGCATCAATAGCGAGCCACCTCTGCTGGTATaGTGCCTTGATATCTGGATCTTTCGATGTCAAAGAGTTCTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: FPSSISINSEPPLLV*CLDIWIFRCQRVLN Trigger: ATTAAGAACTCTTTGACATCGAAAGATCCAGATATCAAGGCACAATACCAGCAGAGGTGGCTCGCTATTGATGCTAATGCTCGACGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS CAA 72 bp | AGCATTAGCATCAATAGCGAGCCACCTCTGCTGGTATaGTGCCTTGATATCTGGATCTTTCGATGTCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SISINSEPPLLV*CLDIWIFRCQR Trigger: TCTTTGACATCGAAAGATCCAGATATCAAGGCACAATACCAGCAGAGGTGGCTCGCTATTGATGCTAATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||
| CDS GCA 72 bp | ATTAGCATCAATAGCGAGCCACCTCTGCTGGTATTGTaGCTTGATATCTGGATCTTTCGATGTCAAAGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: ISINSEPPLLVL*LDIWIFRCQRV Trigger: AACTCTTTGACATCGAAAGATCCAGATATCAAGGCACAATACCAGCAGAGGTGGCTCGCTATTGATGCTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001479.5 |
||