Pregenerated sensors for KPNA7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038770Ensembl transcript IDs: ENSMUST00000110672.8, ENSMUST00000110673.8, ENSMUST00000116454.10, ENSMUST00000139024.8, ENSMUST00000151196.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTCATGCCATGGTGTCGGGTCTCTGCTGCCCCCTGAAGCCGTGTTaGTGTCACTGGCCTGTGCTGCTGTGGAGGGCTGTGATGTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: SHAMVSGLCCPLKPC*CHWPVLLWRAVMLS Trigger: GGACAACATCACAGCCCTCCACAGCAGCACAGGCCAGTGACATCAACACGGCTTCAGGGGGCAGCAGAGACCCGACACCATGGCATGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR TCA 90 bp | TTACCACTGACAGTCATGCCATGGTGTCGGGTCTCTGCTGCCCCCTaGAGCCGTGTTGATGTCACTGGCCTGTGCTGCTGTGGAGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: LPLTVMPWCRVSAAP*SRVDVTGLCCCGGL Trigger: CAGCCCTCCACAGCAGCACAGGCCAGTGACATCAACACGGCTTCAGGGGGCAGCAGAGACCCGACACCATGGCATGACTGTCAGTGGTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR GCA 90 bp | CTGGCCTGTGCTGCTGTGGAGGGCTGTGATGTTGTCCGTGGCTCTTaGTGTGGCAGAGGGGCCCAGCTCAGATGTCCAATATCTGTACTG | + |
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Preference number: 1 (lower is better) Translates to: LACAAVEGCDVVRGS*CGRGAQLRCPISVL Trigger: CAGTACAGATATTGGACATCTGAGCTGGGCCCCTCTGCCACAGCAAGAGCCACGGACAACATCACAGCCCTCCACAGCAGCACAGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR TCA 90 bp | CGTGCTTGGGTCCGTCTGTGGTCCTGCTGCAGCAGGGGGAGGTATTaGTGTCGGTGGCTTGTGTTACCACTGACAGTCATGCCATGGTGT | + |
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Preference number: 1 (lower is better) Translates to: RAWVRLWSCCSRGRY*CRWLVLPLTVMPWC Trigger: ACACCATGGCATGACTGTCAGTGGTAACACAAGCCACCGACATCAATACCTCCCCCTGCTGCAGCAGGACCACAGACGGACCCAAGCACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR GCA 90 bp | AGCACTGAAGAAGACAGAAGTAGGCGATCAGCTCAAGGCCAGCTTTaGCTACATGGGGACTTCAGGGCTAGCTGGGAACACATGAGACCC | + |
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Preference number: 1 (lower is better) Translates to: STEEDRSRRSAQGQL*LHGDFRASWEHMRP Trigger: GGGTCTCATGTGTTCCCAGCTAGCCCTGAAGTCCCCATGTAGGCAAAGCTGGCCTTGAGCTGATCGCCTACTTCTGTCTTCTTCAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGCCCAGGGCCGTGCTTGGGTCCGTCTGTGGTCCTGCTGCAGCAGGGGGATGCTGTGGAGGGCTGTaGTGTTGTCCGTGGCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LLPRAVLGSVCGPAAAGGCCGGL*CCPWLL Trigger: CAAGAGCCACGGACAACATCACAGCCCTCCACAGCA...TCCCCCTGCTGCAGCAGGACCACAGACGGACCCAAGCACGGCCCTGGGCAGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGCCCAGGGCCGTGCTTGGGTCCGTCTGTGGTCCTGCTGCAGCAGGGGGAGTCTCTGCTGCCCCCTaGAGCCGTGTTGATGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: LLPRAVLGSVCGPAAAGGVSAAP*SRVDVT Trigger: AGTGACATCAACACGGCTTCAGGGGGCAGCAGAGAC...TCCCCCTGCTGCAGCAGGACCACAGACGGACCCAAGCACGGCCCTGGGCAGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR-3UTR GCA 90 bp | TTGACTGCTGCTGCCCAGGGCCGTGCTTGGGTCCGTCTGTGGTCCTGCTGCAGCGTTGTCCGTGGCTCTTaGTGTGGCAGAGGGGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LTAAAQGRAWVRLWSCCSVVRGS*CGRGAQ Trigger: CTGGGCCCCTCTGCCACAGCAAGAGCCACGGACAAC...GCTGCAGCAGGACCACAGACGGACCCAAGCACGGCCCTGGGCAGCAGCAGTCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR-3UTR GCA 90 bp | CCGTGCTTGGGTCCGTCTGTGGTCCTGCTGCAGCAGGGGGAGGTATTGATGTCGGTTGTCCGTGGCTCTTaGTGTGGCAGAGGGGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PCLGPSVVLLQQGEVLMSVVRGS*CGRGAQ Trigger: CTGGGCCCCTCTGCCACAGCAAGAGCCACGGACAAC...CGACATCAATACCTCCCCCTGCTGCAGCAGGACCACAGACGGACCCAAGCACGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR CAA 90 bp | CAGTCATGCCATGGTGTCGGGTCTCTGCTGCCCCCTGAAGCCGTGTaGATGTCACTGGCCTGTGCTGCTGTGGAGGGCTGTGATGTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: QSCHGVGSLLPPEAV*MSLACAAVEGCDVV Trigger: GACAACATCACAGCCCTCCACAGCAGCACAGGCCAGTGACATCAACACGGCTTCAGGGGGCAGCAGAGACCCGACACCATGGCATGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR CAA 90 bp | CCGTGCTTGGGTCCGTCTGTGGTCCTGCTGCAGCAGGGGGAGGTATaGATGTCGGTGGCTTGTGTTACCACTGACAGTCATGCCATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: PCLGPSVVLLQQGEV*MSVACVTTDSHAMV Trigger: CACCATGGCATGACTGTCAGTGGTAACACAAGCCACCGACATCAATACCTCCCCCTGCTGCAGCAGGACCACAGACGGACCCAAGCACGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR-3UTR TCA 90 bp | CCGTGCTTGGGTCCGTCTGTGGTCCTGCTGCAGCAGGGGGAGGTATTGATGTCGGGCTTGTGTTACCACTaGCAGTCATGCCATGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: PCLGPSVVLLQQGEVLMSGLCYH*QSCHGV Trigger: GACACCATGGCATGACTGTCAGTGGTAACACAAGCC...CGACATCAATACCTCCCCCTGCTGCAGCAGGACCACAGACGGACCCAAGCACGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR CAA 90 bp | AAATGTTTGCCACGTATATTTGACTGCTGCTGCCCAGGGCCGTGCTaGGGTCCGTCTGTGGTCCTGCTGCAGCAGGGGGAGGTATTGATG | + |
|
Preference number: 2 (lower is better) Translates to: KCLPRIFDCCCPGPC*GPSVVLLQQGEVLM Trigger: CATCAATACCTCCCCCTGCTGCAGCAGGACCACAGACGGACCCAAGCACGGCCCTGGGCAGCAGCAGTCAAATATACGTGGCAAACATTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR-3UTR TCA 90 bp | TGCCTACATGGGGACTTCAGGGCTAGCTGGGAACACATGAGACCCTGTTTCAGATGCTGTGGAGGGCTGTaGTGTTGTCCGTGGCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: CLHGDFRASWEHMRPCFRCCGGL*CCPWLL Trigger: CAAGAGCCACGGACAACATCACAGCCCTCCACAGCA...TCTGAAACAGGGTCTCATGTGTTCCCAGCTAGCCCTGAAGTCCCCATGTAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTGCCACGTATATTTGACTGCTGCTGCCCAGGGCCGTGCTTGGGTCCGTCTGGTCCAATATCTGTACTaGCACCAGAGACCATGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: VCHVYLTAAAQGRAWVRLVQYLY*HQRPCG Trigger: TCCACATGGTCTCTGGTGGCAGTACAGATATTGGAC...CAGACGGACCCAAGCACGGCCCTGGGCAGCAGCAGTCAAATATACGTGGCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR TCA 72 bp | ATGGTGTCGGGTCTCTGCTGCCCCCTGAAGCCGTGTTaGTGTCACTGGCCTGTGCTGCTGTGGAGGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: MVSGLCCPLKPC*CHWPVLLWRAV Trigger: CACAGCCCTCCACAGCAGCACAGGCCAGTGACATCAACACGGCTTCAGGGGGCAGCAGAGACCCGACACCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR GCA 72 bp | TTGCCACGTATATTTGACTGCTGCTGCCCAGGGCCGTaGTTGGGTCCGTCTGTGGTCCTGCTGCAGCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LPRIFDCCCPGP*LGPSVVLLQQG Trigger: CCCCTGCTGCAGCAGGACCACAGACGGACCCAAGCACGGCCCTGGGCAGCAGCAGTCAAATATACGTGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR TCA 72 bp | ACAGTCATGCCATGGTGTCGGGTCTCTGCTGCCCCCTaGAGCCGTGTTGATGTCACTGGCCTGTGCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: TVMPWCRVSAAP*SRVDVTGLCCC Trigger: ACAGCAGCACAGGCCAGTGACATCAACACGGCTTCAGGGGGCAGCAGAGACCCGACACCATGGCATGACTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR GCA 72 bp | GCTGCTGTGGAGGGCTGTGATGTTGTCCGTGGCTCTTaGTGTGGCAGAGGGGCCCAGCTCAGATGTCCAATA | + |
|
Preference number: 3 (lower is better) Translates to: AAVEGCDVVRGS*CGRGAQLRCPI Trigger: TATTGGACATCTGAGCTGGGCCCCTCTGCCACAGCAAGAGCCACGGACAACATCACAGCCCTCCACAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR TCA 72 bp | GTCCGTCTGTGGTCCTGCTGCAGCAGGGGGAGGTATTaGTGTCGGTGGCTTGTGTTACCACTGACAGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: VRLWSCCSRGRY*CRWLVLPLTVM Trigger: CATGACTGTCAGTGGTAACACAAGCCACCGACATCAATACCTCCCCCTGCTGCAGCAGGACCACAGACGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR GCA 72 bp | GCAGAGGGGCCCAGCTCAGATGTCCAATATCTGTACTaGCACCAGAGACCATGTGGATGTCCGTGGTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: AEGPSSDVQYLY*HQRPCGCPWSV Trigger: TACTGACCACGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTGAGCTGGGCCCCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR GCA 72 bp | GAAGACAGAAGTAGGCGATCAGCTCAAGGCCAGCTTTaGCTACATGGGGACTTCAGGGCTAGCTGGGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: EDRSRRSAQGQL*LHGDFRASWEH Trigger: GTGTTCCCAGCTAGCCCTGAAGTCCCCATGTAGGCAAAGCTGGCCTTGAGCTGATCGCCTACTTCTGTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
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| 3UTR TCA 72 bp | GCCTACATGGGGACTTCAGGGCTAGCTGGGAACACATaGGACCCTGTTTCAGAAAATGATACCACCAACCAC | + |
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Preference number: 3 (lower is better) Translates to: AYMGTSGLAGNT*DPVSENDTTNH Trigger: GTGGTTGGTGGTATCATTTTCTGAAACAGGGTCTCATGTGTTCCCAGCTAGCCCTGAAGTCCCCATGTAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
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| 3UTR TCA 72 bp | GCTAGCTGGGAACACATGAGACCCTGTTTCAGAAAATaGTACCACCAACCACTAAAACTCAACGTAATGACA | + |
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Preference number: 3 (lower is better) Translates to: ASWEHMRPCFRK*YHQPLKLNVMT Trigger: TGTCATTACGTTGAGTTTTAGTGGTTGGTGGTATCATTTTCTGAAACAGGGTCTCATGTGTTCCCAGCTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
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| CDS-3UTR CCA 90 bp | CTGCTGCCCAGGGCCGTGCTTGGGTCCGTCTGTGGTCCTGCTGCAGCAGGGGGAGCTCCACTTGGTGTCTaGGCCCAGCGGCCACGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LLPRAVLGSVCGPAAAGGAPLGV*AQRPRC Trigger: GCAACGTGGCCGCTGGGCCCAGACACCAAGTGGAGC...TCCCCCTGCTGCAGCAGGACCACAGACGGACCCAAGCACGGCCCTGGGCAGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR CAA 72 bp | CCACGTATATTTGACTGCTGCTGCCCAGGGCCGTGCTaGGGTCCGTCTGTGGTCCTGCTGCAGCAGGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PRIFDCCCPGPC*GPSVVLLQQGE Trigger: CTCCCCCTGCTGCAGCAGGACCACAGACGGACCCAAGCACGGCCCTGGGCAGCAGCAGTCAAATATACGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR CCA 90 bp | GTGCTGCTGTGGAGGGCTGTGATGTTGTCCGTGGCTCTTGCTGTGGCAGAGGGGCGGCCACGTTGCTCATaGTCCAGGCAGCCAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: VLLWRAVMLSVALAVAEGRPRCS*SRQPAP Trigger: AGGTGCTGGCTGCCTGGACCATGAGCAACGTGGCCG...CCCCTCTGCCACAGCAAGAGCCACGGACAACATCACAGCCCTCCACAGCAGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| 3UTR CAA 72 bp | CATGGTGTCGGGTCTCTGCTGCCCCCTGAAGCCGTGTaGATGTCACTGGCCTGTGCTGCTGTGGAGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HGVGSLLPPEAV*MSLACAAVEGC Trigger: ACAGCCCTCCACAGCAGCACAGGCCAGTGACATCAACACGGCTTCAGGGGGCAGCAGAGACCCGACACCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR GCA 90 bp | CTGCTGCCCAGGGCCGTGCTTGGGTCCGTCTGTGGTCCTGCTGCAGCAGGGGGACGGGTAGCCCGAAAATaGAGGATTGGATCTGAACTA | + |
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Preference number: 4 (lower is better) Translates to: LLPRAVLGSVCGPAAAGGRVARK*RIGSEL Trigger: TAGTTCAGATCCAATCCTGCATTTTCGGGCTACCCG...TCCCCCTGCTGCAGCAGGACCACAGACGGACCCAAGCACGGCCCTGGGCAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR CCA 90 bp | CCGTGCTTGGGTCCGTCTGTGGTCCTGCTGCAGCAGGGGGAGGTATTGATGTCGGGGTGCTTCAGGACCTaGCCCAACACCTTCAGCATG | + |
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Preference number: 4 (lower is better) Translates to: PCLGPSVVLLQQGEVLMSGCFRT*PNTFSM Trigger: CATGCTGAAGGTGTTGGGCCAGGTCCTGAAGCACCC...CGACATCAATACCTCCCCCTGCTGCAGCAGGACCACAGACGGACCCAAGCACGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR TCA 90 bp | TGGCCTGTGCTGCTGTGGAGGGCTGTGATGTTGTCCGTGGCTCTTGCTGTGGCACGATGCAGCAGGAGTTaGCAGAGGGGAGGTAGCATC | + |
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Preference number: 4 (lower is better) Translates to: WPVLLWRAVMLSVALAVARCSRS*QRGGSI Trigger: GATGCTACCTCCCCTCTGTCAACTCCTGCTGCATCG...TGCCACAGCAAGAGCCACGGACAACATCACAGCCCTCCACAGCAGCACAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR TCA 90 bp | CCCCCTGAAGCCGTGTTGATGTCACTGGCCTGTGCTGCTGTGGAGGGCTGTGATAGAGTCAGCTGGTCCTaGGAGGCTCCTGTTGCAATG | + |
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Preference number: 4 (lower is better) Translates to: PPEAVLMSLACAAVEGCDRVSWS*EAPVAM Trigger: CATTGCAACAGGAGCCTCTCAGGACCAGCTGACTCT...ATCACAGCCCTCCACAGCAGCACAGGCCAGTGACATCAACACGGCTTCAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR GCA 90 bp | TTGACTGCTGCTGCCCAGGGCCGTGCTTGGGTCCGTCTGTGGTCCTGCTGCAGCGATGGATATACTCTTTaGCACCCTTGGTCAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LTAAAQGRAWVRLWSCCSDGYTL*HPWSGR Trigger: CCTACCTGACCAAGGGTGGCAAAGAGTATATCCATC...GCTGCAGCAGGACCACAGACGGACCCAAGCACGGCCCTGGGCAGCAGCAGTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR GCA 90 bp | CCCCCTGAAGCCGTGTTGATGTCACTGGCCTGTGCTGCTGTGGAGGGCTGTGATTTCTGCACAGTCTCCTaGCTTTGCCTCCCGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: PPEAVLMSLACAAVEGCDFCTVS*LCLPCA Trigger: AGCACACGGGAGGCAAAGGCAGGAGACTGTGCAGAA...ATCACAGCCCTCCACAGCAGCACAGGCCAGTGACATCAACACGGCTTCAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
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| CDS-3UTR CCA 90 bp | GTTTGCCACGTATATTTGACTGCTGCTGCCCAGGGCCGTGCTTGGGTCCGTCTGGGGTGCTTCAGGACCTaGCCCAACACCTTCAGCATG | + |
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Preference number: 4 (lower is better) Translates to: VCHVYLTAAAQGRAWVRLGCFRT*PNTFSM Trigger: CATGCTGAAGGTGTTGGGCCAGGTCCTGAAGCACCC...CAGACGGACCCAAGCACGGCCCTGGGCAGCAGCAGTCAAATATACGTGGCAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR CCA 90 bp | GTTTGCCACGTATATTTGACTGCTGCTGCCCAGGGCCGTGCTTGGGTCCGTCTGCAGCCAGCACCTGGATaGAGGTCTTCGGGTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VCHVYLTAAAQGRAWVRLQPAPG*RSSGAS Trigger: TGAAGCACCCGAAGACCTCCATCCAGGTGCTGGCTG...CAGACGGACCCAAGCACGGCCCTGGGCAGCAGCAGTCAAATATACGTGGCAAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR CCA 90 bp | GGCTCTTGCTGTGGCAGAGGGGCCCAGCTCAGATGTCCAATATCTGTACTGCCAAAAAGCTGCTCCACTTaGTGTCTGGGCCCAGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: GSCCGRGAQLRCPISVLPKSCST*CLGPAA Trigger: GGCCGCTGGGCCCAGACACCAAGTGGAGCAGCTTTT...TGGCAGTACAGATATTGGACATCTGAGCTGGGCCCCTCTGCCACAGCAAGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR GCA 90 bp | GTGCTGCTGTGGAGGGCTGTGATGTTGTCCGTGGCTCTTGCTGTGGCAGAGGGGGGAGGGGTATTTTCCTaGGAGATCATTTCCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: VLLWRAVMLSVALAVAEGGGVFS*EIISLA Trigger: TGCCAGGGAAATGATCTCGCAGGAAAATACCCCTCC...CCCCTCTGCCACAGCAAGAGCCACGGACAACATCACAGCCCTCCACAGCAGCAC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR GCA 90 bp | GGCTCTTGCTGTGGCAGAGGGGCCCAGCTCAGATGTCCAATATCTGTACTGCCAAGGGCCCACACTGCCTaGTCAGACACTGTCAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GSCCGRGAQLRCPISVLPRAHTA*SDTVRC Trigger: ACACCTGACAGTGTCTGAGCAGGCAGTGTGGGCCCT...TGGCAGTACAGATATTGGACATCTGAGCTGGGCCCCTCTGCCACAGCAAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR GCA 90 bp | CGGTGGCTTGTGTTACCACTGACAGTCATGCCATGGTGTCGGGTCTCTGCTGCCCAAGCCTGGGCAGGATaGCAGTGGTCACCACATGAT | + |
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Preference number: 4 (lower is better) Translates to: RWLVLPLTVMPWCRVSAAQAWAG*QWSPHD Trigger: ATCATGTGGTGACCACTGGCATCCTGCCCAGGCTTG...GGCAGCAGAGACCCGACACCATGGCATGACTGTCAGTGGTAACACAAGCCACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR CCA 90 bp | GGCTCTTGCTGTGGCAGAGGGGCCCAGCTCAGATGTCCAATATCTGTACTGCCACCTCGAACTGCAGCTTaGGGTGAGGTGTCGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GSCCGRGAQLRCPISVLPPRTAA*GEVSPS Trigger: TGAAGGCGACACCTCACCCCAAGCTGCAGTTCGAGG...TGGCAGTACAGATATTGGACATCTGAGCTGGGCCCCTCTGCCACAGCAAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR CCA 90 bp | GCTCAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGTGGTGCTCCACTTGGTGTCTaGGCCCAGCGGCCACGTTGC | + |
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Preference number: 4 (lower is better) Translates to: AQMSNICTATRDHVDVRGAPLGV*AQRPRC Trigger: GCAACGTGGCCGCTGGGCCCAGACACCAAGTGGAGC...ACCACGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR GCA 90 bp | GTGGCTTGTGTTACCACTGACAGTCATGCCATGGTGTCGGGTCTCTGCTGCCCCACAACAGCTCGGGTCTaGTCTGAAGTTCCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VACVTTDSHAMVSGLCCPTTARV*SEVPEA Trigger: TGCCTCAGGAACTTCAGAGCAGACCCGAGCTGTTGT...GGGGCAGCAGAGACCCGACACCATGGCATGACTGTCAGTGGTAACACAAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR GCA 90 bp | GTTTGCCACGTATATTTGACTGCTGCTGCCCAGGGCCGTGCTTGGGTCCGTCTGACAACAGCTCGGGTCTaGTCTGAAGTTCCTGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: VCHVYLTAAAQGRAWVRLTTARV*SEVPEA Trigger: TGCCTCAGGAACTTCAGAGCAGACCCGAGCTGTTGT...CAGACGGACCCAAGCACGGCCCTGGGCAGCAGCAGTCAAATATACGTGGCAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR CCA 90 bp | TGTGCTGCTGTGGAGGGCTGTGATGTTGTCCGTGGCTCTTGCTGTGGCAGAGGGCCTGCTCATCTTTCCTaGTCTTCCGGAGTTGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CAAVEGCDVVRGSCCGRGPAHLS*SSGVVD Trigger: GTCTACAACTCCGGAAGACCAGGAAAGATGAGCAGG...CCCTCTGCCACAGCAAGAGCCACGGACAACATCACAGCCCTCCACAGCAGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| 3UTR CAA 72 bp | GGTCCGTCTGTGGTCCTGCTGCAGCAGGGGGAGGTATaGATGTCGGTGGCTTGTGTTACCACTGACAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPSVVLLQQGEV*MSVACVTTDSH Trigger: ATGACTGTCAGTGGTAACACAAGCCACCGACATCAATACCTCCCCCTGCTGCAGCAGGACCACAGACGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTACATGGGGACTTCAGGGCTAGCTGGGAACACATGAGACCCTGTTTCAGAACAGTCTCCTGCCTTTaGCTCCCGTGTGCTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLHGDFRASWEHMRPCFRTVSCL*LPCAGS Trigger: ACTCCCAGCACACGGGAGGCAAAGGCAGGAGACTGT...TCTGAAACAGGGTCTCATGTGTTCCCAGCTAGCCCTGAAGTCCCCATGTAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTACATGGGGACTTCAGGGCTAGCTGGGAACACATGAGACCCTGTTTCAGACAGCCAGCACCTGGATaGAGGTCTTCGGGTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLHGDFRASWEHMRPCFRQPAPG*RSSGAS Trigger: TGAAGCACCCGAAGACCTCCATCCAGGTGCTGGCTG...TCTGAAACAGGGTCTCATGTGTTCCCAGCTAGCCCTGAAGTCCCCATGTAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGTAAAAGCTGCTCCACTTaGTGTCTGGGCCCAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PAQMSNICTATRDHVDVRKSCST*CLGPAA Trigger: GGCCGCTGGGCCCAGACACCAAGTGGAGCAGCTTTT...ACGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTGAGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCTTGTGTTACCACTGACAGTCATGCCATGGTGTCGGGTCTCTGCTGCCCCCTGTTGTCGTGGCAATaGCATTTCTTTGCCTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VACVTTDSHAMVSGLCCPLLSWQ*HFFASV Trigger: TACCGAGGCAAAGAAATGTCATTGCCACGACAACAG...GGGGCAGCAGAGACCCGACACCATGGCATGACTGTCAGTGGTAACACAAGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCTCAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGTCGATGCAGCAGGAGTTaGCAGAGGGGAGGTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PAQMSNICTATRDHVDVRRCSRS*QRGGSI Trigger: GATGCTACCTCCCCTCTGTCAACTCCTGCTGCATCG...ACGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTGAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR GCA 90 bp | TTGACTGCTGCTGCCCAGGGCCGTGCTTGGGTCCGTCTGTGGTCCTGCTGCAGCGCAATGACATTTCTTTaGCTCGGTACTTATAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTAAAQGRAWVRLWSCCSAMTFL*LGTYSS Trigger: AGAACTATAAGTACCGAGGCAAAGAAATGTCATTGC...GCTGCAGCAGGACCACAGACGGACCCAAGCACGGCCCTGGGCAGCAGCAGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR GCA 90 bp | CAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGTGGTCAGAGGGCCCACACTGCCTaGTCAGACACTGTCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QMSNICTATRDHVDVRGQRAHTA*SDTVRC Trigger: ACACCTGACAGTGTCTGAGCAGGCAGTGTGGGCCCT...CTGACCACGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGTGGTCAGCCTCGAACTGCAGCTTaGGGTGAGGTGTCGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QMSNICTATRDHVDVRGQPRTAA*GEVSPS Trigger: TGAAGGCGACACCTCACCCCAAGCTGCAGTTCGAGG...CTGACCACGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCTTGCTGTGGCAGAGGGGCCCAGCTCAGATGTCCAATATCTGTACTGCCACTGTTGTCGTGGCAATaGCATTTCTTTGCCTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSCCGRGAQLRCPISVLPLLSWQ*HFFASV Trigger: TACCGAGGCAAAGAAATGTCATTGCCACGACAACAG...TGGCAGTACAGATATTGGACATCTGAGCTGGGCCCCTCTGCCACAGCAAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR TCA 90 bp | GCTCAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGTGGTAGAGTCAGCTGGTCCTaGGAGGCTCCTGTTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: AQMSNICTATRDHVDVRGRVSWS*EAPVAM Trigger: CATTGCAACAGGAGCCTCTCAGGACCAGCTGACTCT...ACCACGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTGAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGCTCAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGAGTTCAATCAGGGGCTaGATGGCACCCTCTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PSSDVQYLYCHQRPCGCPSSIRG*MAPSFT Trigger: TGTGAAAGAGGGTGCCATTCAGCCCCTGATTGAACT...CGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTGAGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR GCA 90 bp | CGGTGGCTTGTGTTACCACTGACAGTCATGCCATGGTGTCGGGTCTCTGCTGCCACAGTCTCTGAATTCTaGACAGTCTCCAGCGATATT | + |
|
Preference number: 4 (lower is better) Translates to: RWLVLPLTVMPWCRVSAATVSEF*TVSSDI Trigger: AATATCGCTGGAGACTGTGCAGAATTCAGAGACTGT...GGCAGCAGAGACCCGACACCATGGCATGACTGTCAGTGGTAACACAAGCCACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110672.8 |
||
| CDS-3UTR GCA 90 bp | CTTAGCACTGAAGAAGACAGAAGTAGGCGATCAGCTCAAGGCCAGCTTTGCCTACAAGCCTGGGCAGGATaGCAGTGGTCACCACATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSTEEDRSRRSAQGQLCLQAWAG*QWSPHD Trigger: ATCATGTGGTGACCACTGGCATCCTGCCCAGGCTTG...TAGGCAAAGCTGGCCTTGAGCTGATCGCCTACTTCTGTCTTCTTCAGTGCTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTCAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGGCACGGCGCTCTCACTaGGATATGGATCTTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSSDVQYLYCHQRPCGCPARRSH*DMDLCF Trigger: GAAACAAAGATCCATATCCCAGTGAGAGCGCCGTGC...CGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTGAGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGCTGTGGAGGGCTGTGATGTTGTCCGTGGCTCTTGCTGTGGCAGAGGGCACACAACCTCCTTCTaGACTTTTAATTCTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: CAAVEGCDVVRGSCCGRGHTTSF*TFNSAF Trigger: GAATGCAGAATTAAAAGTCCAGAAGGAGGTTGTGTG...CCCTCTGCCACAGCAAGAGCCACGGACAACATCACAGCCCTCCACAGCAGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGTGCACGGCGCTCTCACTaGGATATGGATCTTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PAQMSNICTATRDHVDVRARRSH*DMDLCF Trigger: GAAACAAAGATCCATATCCCAGTGAGAGCGCCGTGC...ACGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTGAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTGGCAGAGGGGCCCAGCTCAGATGTCCAATATCTGTACTGCCACCAGAGAGATTGGTATGCCTTTTaGAATAAGGTTGATCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVAEGPSSDVQYLYCHQRDWYAF*NKVDQV Trigger: CACCTGATCAACCTTATTTCAAAAGGCATACCAATC...TCTCTGGTGGCAGTACAGATATTGGACATCTGAGCTGGGCCCCTCTGCCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGTGGTCAGAGACACTGTCAGGTGTaGGGAACAGAGGAGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QMSNICTATRDHVDVRGQRHCQV*GTEEFN Trigger: ATTGAACTCCTCTGTTCCCCACACCTGACAGTGTCT...CTGACCACGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR GCA 90 bp | CTTAGCACTGAAGAAGACAGAAGTAGGCGATCAGCTCAAGGCCAGCTTTGCCTACGGGTAGCCCGAAAATaGAGGATTGGATCTGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: LSTEEDRSRRSAQGQLCLRVARK*RIGSEL Trigger: TAGTTCAGATCCAATCCTGCATTTTCGGGCTACCCG...TAGGCAAAGCTGGCCTTGAGCTGATCGCCTACTTCTGTCTTCTTCAGTGCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
||
| CDS-3UTR GCA 90 bp | CTTAGCACTGAAGAAGACAGAAGTAGGCGATCAGCTCAAGGCCAGCTTTGCCTAGATGGATATACTCTTTaGCACCCTTGGTCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTEEDRSRRSAQGQLCLDGYTL*HPWSGR Trigger: CCTACCTGACCAAGGGTGGCAAAGAGTATATCCATC...TAGGCAAAGCTGGCCTTGAGCTGATCGCCTACTTCTGTCTTCTTCAGTGCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
||
| CDS-3UTR TCA 90 bp | AACGGCAACAAAAACAAAAGACATGGTCCCTCGTTGATCCCTCGGCTGATAAAAAGTTCAATCAGGGGCTaGATGGCACCCTCTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: NGNKNKRHGPSLIPRLIKSSIRG*MAPSFT Trigger: TGTGAAAGAGGGTGCCATTCAGCCCCTGATTGAACT...TTTTATCAGCCGAGGGATCAACGAGGGACCATGTCTTTTGTTTTTGTTGCCGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGTTGTTTCGGCATAAGTTaGACAAAGTCCATGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PAQMSNICTATRDHVDVRCFGIS*TKSMRC Trigger: ACATCTCATGGACTTTGTCCAACTTATGCCGAAACA...ACGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTGAGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGTGGTCAGCACACAACCTCCTTCTaGACTTTTAATTCTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: QMSNICTATRDHVDVRGQHTTSF*TFNSAF Trigger: GAATGCAGAATTAAAAGTCCAGAAGGAGGTTGTGTG...CTGACCACGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTCAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGATGGAAATGTTGTGGTaGTGCTGTAAACACTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: PSSDVQYLYCHQRPCGCPMEMLW*CCKHSI Trigger: AATTGAGTGTTTACAGCACCACCACAACATTTCCAT...CGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTGAGCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCTCAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGTGCAATGACATTTCTTTaGCTCGGTACTTATAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PAQMSNICTATRDHVDVRAMTFL*LGTYSS Trigger: AGAACTATAAGTACCGAGGCAAAGAAATGTCATTGC...ACGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTGAGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGTATGGAAATGTTGTGGTaGTGCTGTAAACACTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: PAQMSNICTATRDHVDVRMEMLW*CCKHSI Trigger: AATTGAGTGTTTACAGCACCACCACAACATTTCCAT...ACGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTGAGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS CCA 90 bp | CTGGGCCCAGCGGCCACGTTGCTCATGGTCCAGGCAGCCAGCACCTaGATGGAGGTCTTCGGGTGCTTCAGGACCTGGCCCAACACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGPAATLLMVQAAST*MEVFGCFRTWPNTF Trigger: GAAGGTGTTGGGCCAGGTCCTGAAGCACCCGAAGACCTCCATCCAGGTGCTGGCTGCCTGGACCATGAGCAACGTGGCCGCTGGGCCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
||
| CDS CCA 90 bp | GCCCAGCGGCCACGTTGCTCATGGTCCAGGCAGCCAGCACCTGGATaGAGGTCTTCGGGTGCTTCAGGACCTGGCCCAACACCTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AQRPRCSWSRQPAPG*RSSGASGPGPTPSA Trigger: TGCTGAAGGTGTTGGGCCAGGTCCTGAAGCACCCGAAGACCTCCATCCAGGTGCTGGCTGCCTGGACCATGAGCAACGTGGCCGCTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
||
| CDS-3UTR CAA 90 bp | CCCCCTGAAGCCGTGTTGATGTCACTGGCCTGTGCTGCTGTGGAGGGCTGTGATCAAAAGCTGCTCCACTaGGTGTCTGGGCCCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPEAVLMSLACAAVEGCDQKLLH*VSGPSG Trigger: GCCGCTGGGCCCAGACACCAAGTGGAGCAGCTTTTG...ATCACAGCCCTCCACAGCAGCACAGGCCAGTGACATCAACACGGCTTCAGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS TCA 90 bp | GCAATGTTGGTGAGCACCCATGCGGCCTCGAACTGCAGCTTGGGGTaGGGTGTCGCCTTCAGGAAGTCCACCAGCTTGGGAATGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: AMLVSTHAASNCSLG*GVAFRKSTSLGMSP Trigger: CGGGCTCATTCCCAAGCTGGTGGACTTCCTGAAGGCGACACCTCACCCCAAGCTGCAGTTCGAGGCCGCATGGGTGCTCACCAACATTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 ENSMUST00000139024.8 |
||
| CDS-3UTR CAA 90 bp | CGGTGGCTTGTGTTACCACTGACAGTCATGCCATGGTGTCGGGTCTCTGCTGCCCAAAAGCTGCTCCACTaGGTGTCTGGGCCCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RWLVLPLTVMPWCRVSAAQKLLH*VSGPSG Trigger: GCCGCTGGGCCCAGACACCAAGTGGAGCAGCTTTTG...GGCAGCAGAGACCCGACACCATGGCATGACTGTCAGTGGTAACACAAGCCACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR CAA 90 bp | TTGACTGCTGCTGCCCAGGGCCGTGCTTGGGTCCGTCTGTGGTCCTGCTGCAGCTGTGGGATGGCATTATaGGAGATGACACAGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LTAAAQGRAWVRLWSCCSCGMAL*EMTQSL Trigger: CAGAGACTGTGTCATCTCCAATAATGCCATCCCACA...GCTGCAGCAGGACCACAGACGGACCCAAGCACGGCCCTGGGCAGCAGCAGTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCTGTGCTGCTGTGGAGGGCTGTGATGTTGTCCGTGGCTCTTGCTGTGGCATTCTTCAGCCTCTCTTaGGGAGCCTTTGAGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WPVLLWRAVMLSVALAVAFFSLS*GAFEVA Trigger: GGCTACCTCAAAGGCTCCCAAAGAGAGGCTGAAGAA...TGCCACAGCAAGAGCCACGGACAACATCACAGCCCTCCACAGCAGCACAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS CCA 90 bp | AGGTCTACCAAAATAGGCAGCAAGTTACACAAAAGCTGCTCCACTTaGTGTCTGGGCCCAGCGGCCACGTTGCTCATGGTCCAGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSTKIGSKLHKSCST*CLGPAATLLMVQAA Trigger: GGCTGCCTGGACCATGAGCAACGTGGCCGCTGGGCCCAGACACCAAGTGGAGCAGCTTTTGTGTAACTTGCTGCCTATTTTGGTAGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
||
| CDS CCA 90 bp | CTTTGCCTCCCGTGTGCTGGGAGTAAAGATCTGCACCTGCGTGTCTaGCATCTTTCTGTCAGCGATATTCCCAAGGGCCCACACTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LCLPCAGSKDLHLRV*HLSVSDIPKGPHCL Trigger: CAGGCAGTGTGGGCCCTTGGGAATATCGCTGACAGAAAGATGCCAGACACGCAGGTGCAGATCTTTACTCCCAGCACACGGGAGGCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
||
| CDS GCA 90 bp | GCACAGTCTCCTGCCTTTGCCTCCCGTGTGCTGGGAGTAAAGATCTaGACCTGCGTGTCTGGCATCTTTCTGTCAGCGATATTCCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AQSPAFASRVLGVKI*TCVSGIFLSAIFPR Trigger: CCTTGGGAATATCGCTGACAGAAAGATGCCAGACACGCAGGTGCAGATCTTTACTCCCAGCACACGGGAGGCAAAGGCAGGAGACTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCTTGCTGTGGCAGAGGGGCCCAGCTCAGATGTCCAATATCTGTACTGCCATTCTTCAGCCTCTCTTaGGGAGCCTTTGAGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSCCGRGAQLRCPISVLPFFSLS*GAFEVA Trigger: GGCTACCTCAAAGGCTCCCAAAGAGAGGCTGAAGAA...TGGCAGTACAGATATTGGACATCTGAGCTGGGCCCCTCTGCCACAGCAAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCTGCTGTGGAGGGCTGTGATGTTGTCCGTGGCTCTTGCTGTGGCAGAGGGCCCGAAAATGCAGGATaGGATCTGAACTATTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: CAAVEGCDVVRGSCCGRGPENAG*DLNYSP Trigger: CGGTGAATAGTTCAGATCCAATCCTGCATTTTCGGG...CCCTCTGCCACAGCAAGAGCCACGGACAACATCACAGCCCTCCACAGCAGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS GCA 90 bp | AATTCTGCACAGTCTCCAGCGATATTCCCAAGGGCCCACACTGCCTaGTCAGACACTGTCAGGTGTGGGGAACAGAGGAGTTCAATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSAQSPAIFPRAHTA*SDTVRCGEQRSSIR Trigger: CCTGATTGAACTCCTCTGTTCCCCACACCTGACAGTGTCTGAGCAGGCAGTGTGGGCCCTTGGGAATATCGCTGGAGACTGTGCAGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000116454.10 ENSMUST00000139024.8 |
||
| CDS GCA 90 bp | TCTGGCATCTTTCTGTCAGCGATATTCCCAAGGGCCCACACTGCCTaGTCAGACACTGTCAGGTGTGGGGAACAGAGGAGTTCAATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGIFLSAIFPRAHTA*SDTVRCGEQRSSIR Trigger: CCTGATTGAACTCCTCTGTTCCCCACACCTGACAGTGTCTGAGCAGGCAGTGTGGGCCCTTGGGAATATCGCTGACAGAAAGATGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
||
| CDS GCA 90 bp | CGTGTCTGGCATCTTTCTGTCAGCGATATTCCCAAGGGCCCACACTaGCTGCTCAGACACTGTCAGGTGTGGGGAACAGAGGAGTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RVWHLSVSDIPKGPH*LLRHCQVWGTEEFN Trigger: ATTGAACTCCTCTGTTCCCCACACCTGACAGTGTCTGAGCAGGCAGTGTGGGCCCTTGGGAATATCGCTGACAGAAAGATGCCAGACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCTGCTGTGGAGGGCTGTGATGTTGTCCGTGGCTCTTGCTGTGGCAGAGGGTTGCTGATGGAAATGTaGTGGTGGTGCTGTAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: CAAVEGCDVVRGSCCGRGLLMEM*WWCCKH Trigger: GTGTTTACAGCACCACCACAACATTTCCATCAGCAA...CCCTCTGCCACAGCAAGAGCCACGGACAACATCACAGCCCTCCACAGCAGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
||
| CDS GCA 90 bp | TCTGAATTCTGCACAGTCTCCAGCGATATTCCCAAGGGCCCACACTaGCTGCTCAGACACTGTCAGGTGTGGGGAACAGAGGAGTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SEFCTVSSDIPKGPH*LLRHCQVWGTEEFN Trigger: ATTGAACTCCTCTGTTCCCCACACCTGACAGTGTCTGAGCAGGCAGTGTGGGCCCTTGGGAATATCGCTGGAGACTGTGCAGAATTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000116454.10 |
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| CDS CCA 90 bp | GGAGTTGACAGAGGGGAGGTAGCATCTGCCGCACGGCGCTCTCACTaGGATATGGATCTTTGTTTCGGCATAAGTTGGACAAAGTCCATG | + |
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Preference number: 5 (lower is better) Translates to: GVDRGEVASAARRSH*DMDLCFGISWTKSM Trigger: CATGGACTTTGTCCAACTTATGCCGAAACAAAGATCCATATCCCAGTGAGAGCGCCGTGCGGCAGATGCTACCTCCCCTCTGTCAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
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| CDS GCA 90 bp | TTCCTTAGTAGGTCTACCAAAATAGGCAGCAAGTTACACAAAAGCTaGTCCACTTGGTGTCTGGGCCCAGCGGCCACGTTGCTCATGGTC | + |
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Preference number: 5 (lower is better) Translates to: FLSRSTKIGSKLHKS*STWCLGPAATLLMV Trigger: GACCATGAGCAACGTGGCCGCTGGGCCCAGACACCAAGTGGAGCAGCTTTTGTGTAACTTGCTGCCTATTTTGGTAGACCTACTAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
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| CDS-3UTR CAA 90 bp | GGCTCTTGCTGTGGCAGAGGGGCCCAGCTCAGATGTCCAATATCTGTACTGCCACCTTTTGAAATAAGGTaGATCAGGTGTGGGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: GSCCGRGAQLRCPISVLPPFEIR*IRCGMA Trigger: TGCCATCCCACACCTGATCAACCTTATTTCAAAAGG...TGGCAGTACAGATATTGGACATCTGAGCTGGGCCCCTCTGCCACAGCAAGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR CAA 90 bp | GGCTCTTGCTGTGGCAGAGGGGCCCAGCTCAGATGTCCAATATCTGTACTGCCATTGTTTCGGCATAAGTaGGACAAAGTCCATGAGATG | + |
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Preference number: 5 (lower is better) Translates to: GSCCGRGAQLRCPISVLPLFRHK*DKVHEM Trigger: CATCTCATGGACTTTGTCCAACTTATGCCGAAACAA...TGGCAGTACAGATATTGGACATCTGAGCTGGGCCCCTCTGCCACAGCAAGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR CAA 90 bp | GCTGTGGCAGAGGGGCCCAGCTCAGATGTCCAATATCTGTACTGCCACCAGAGATTGTTTCGGCATAAGTaGGACAAAGTCCATGAGATG | + |
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Preference number: 5 (lower is better) Translates to: AVAEGPSSDVQYLYCHQRLFRHK*DKVHEM Trigger: CATCTCATGGACTTTGTCCAACTTATGCCGAAACAA...TCTCTGGTGGCAGTACAGATATTGGACATCTGAGCTGGGCCCCTCTGCCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS GCA 90 bp | CAGCATGCCAGCATCGATAGCCATCTGGGTCTGTTCATCTGTTCCTaGCACAATGTTGCCTATAGTGTGGAGACAAGGTATCGAGATGCT | + |
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Preference number: 5 (lower is better) Translates to: QHASIDSHLGLFICS*HNVAYSVETRYRDA Trigger: AGCATCTCGATACCTTGTCTCCACACTATAGGCAACATTGTGGCAGGAACAGATGAACAGACCCAGATGGCTATCGATGCTGGCATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
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| CDS-3UTR CAA 90 bp | CAGATGTCCAATATCTGTACTGCCACCAGAGACCATGTGGATGTCCGTGGTCAGCCCGAAAATGCAGGATaGGATCTGAACTATTCACCG | + |
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Preference number: 5 (lower is better) Translates to: QMSNICTATRDHVDVRGQPENAG*DLNYSP Trigger: CGGTGAATAGTTCAGATCCAATCCTGCATTTTCGGG...CTGACCACGGACATCCACATGGTCTCTGGTGGCAGTACAGATATTGGACATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS CCA 90 bp | ATCTGGGTCTGTTCATCTGTTCCTGCCACAATGTTGCCTATAGTGTaGAGACAAGGTATCGAGATGCTGAGTTCCGAGCTGGTCATAAGC | + |
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Preference number: 5 (lower is better) Translates to: IWVCSSVPATMLPIV*RQGIEMLSSELVIS Trigger: GCTTATGACCAGCTCGGAACTCAGCATCTCGATACCTTGTCTCCACACTATAGGCAACATTGTGGCAGGAACAGATGAACAGACCCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
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| CDS GCA 90 bp | GTAGACTGGAAGCAATCCTCTGTTGTCGTGGCAATGACATTTCTTTaGCTCGGTACTTATAGTTCTTCAGCCTCTCTTTGGGAGCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: VDWKQSSVVVAMTFL*LGTYSSSASLWEPL Trigger: CAAAGGCTCCCAAAGAGAGGCTGAAGAACTATAAGTACCGAGGCAAAGAAATGTCATTGCCACGACAACAGAGGATTGCTTCCAGTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 ENSMUST00000139024.8 ENSMUST00000151196.2 |
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| CDS-3UTR CAA 90 bp | AACGGCAACAAAAACAAAAGACATGGTCCCTCGTTGATCCCTCGGCTGATAAAACCTTTTGAAATAAGGTaGATCAGGTGTGGGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: NGNKNKRHGPSLIPRLIKPFEIR*IRCGMA Trigger: TGCCATCCCACACCTGATCAACCTTATTTCAAAAGG...TTTTATCAGCCGAGGGATCAACGAGGGACCATGTCTTTTGTTTTTGTTGCCGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS-3UTR CAA 90 bp | AACGGCAACAAAAACAAAAGACATGGTCCCTCGTTGATCCCTCGGCTGATAAAATTGCTGATGGAAATGTaGTGGTGGTGCTGTAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: NGNKNKRHGPSLIPRLIKLLMEM*WWCCKH Trigger: GTGTTTACAGCACCACCACAACATTTCCATCAGCAA...TTTTATCAGCCGAGGGATCAACGAGGGACCATGTCTTTTGTTTTTGTTGCCGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 |
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| CDS GCA 72 bp | GCTGCTCCACTTGGTGTCTGGGCCCAGCGGCCACGTTaGTCATGGTCCAGGCAGCCAGCACCTGGATGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AAPLGVWAQRPR*SWSRQPAPGWR Trigger: CCTCCATCCAGGTGCTGGCTGCCTGGACCATGAGCAACGTGGCCGCTGGGCCCAGACACCAAGTGGAGCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
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| CDS CAA 72 bp | AGCTGCTCCACTTGGTGTCTGGGCCCAGCGGCCACGTaGCTCATGGTCCAGGCAGCCAGCACCTGGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SCSTWCLGPAAT*LMVQAASTWME Trigger: CTCCATCCAGGTGCTGGCTGCCTGGACCATGAGCAACGTGGCCGCTGGGCCCAGACACCAAGTGGAGCAGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
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| CDS TCA 72 bp | CTCGGGTCTGCTCTGAAGTTCCTGAGGCAATGTTGGTaGGCACCCATGCGGCCTCGAACTGCAGCTTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LGSALKFLRQCW*APMRPRTAAWG Trigger: ACCCCAAGCTGCAGTTCGAGGCCGCATGGGTGCTCACCAACATTGCCTCAGGAACTTCAGAGCAGACCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 ENSMUST00000139024.8 |
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| CDS CCA 72 bp | GCAGCAAGTTACACAAAAGCTGCTCCACTTGGTGTCTaGGCCCAGCGGCCACGTTGCTCATGGTCCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AASYTKAAPLGV*AQRPRCSWSRQ Trigger: CTGCCTGGACCATGAGCAACGTGGCCGCTGGGCCCAGACACCAAGTGGAGCAGCTTTTGTGTAACTTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
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| CDS GCA 72 bp | CAGTCTCCAGCGATATTCCCAAGGGCCCACACTGCCTaGTCAGACACTGTCAGGTGTGGGGAACAGAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: QSPAIFPRAHTA*SDTVRCGEQRS Trigger: ACTCCTCTGTTCCCCACACCTGACAGTGTCTGAGCAGGCAGTGTGGGCCCTTGGGAATATCGCTGGAGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000116454.10 ENSMUST00000139024.8 |
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| CDS GCA 72 bp | TGCACAGTCTCCAGCGATATTCCCAAGGGCCCACACTaGCTGCTCAGACACTGTCAGGTGTGGGGAACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: CTVSSDIPKGPH*LLRHCQVWGTE Trigger: CTCTGTTCCCCACACCTGACAGTGTCTGAGCAGGCAGTGTGGGCCCTTGGGAATATCGCTGGAGACTGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000116454.10 ENSMUST00000139024.8 |
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| CDS CAA 72 bp | ACAGCTCGGGTCTGCTCTGAAGTTCCTGAGGCAATGTaGGTGAGCACCCATGCGGCCTCGAACTGCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: TARVCSEVPEAM*VSTHAASNCSL Trigger: CAAGCTGCAGTTCGAGGCCGCATGGGTGCTCACCAACATTGCCTCAGGAACTTCAGAGCAGACCCGAGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 ENSMUST00000139024.8 |
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| CDS GCA 72 bp | TTTCTGTCAGCGATATTCCCAAGGGCCCACACTGCCTaGTCAGACACTGTCAGGTGTGGGGAACAGAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: FLSAIFPRAHTA*SDTVRCGEQRS Trigger: ACTCCTCTGTTCCCCACACCTGACAGTGTCTGAGCAGGCAGTGTGGGCCCTTGGGAATATCGCTGACAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
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| CDS GCA 72 bp | CATCTTTCTGTCAGCGATATTCCCAAGGGCCCACACTaGCTGCTCAGACACTGTCAGGTGTGGGGAACAGAG | + |
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Preference number: 6 (lower is better) Translates to: HLSVSDIPKGPH*LLRHCQVWGTE Trigger: CTCTGTTCCCCACACCTGACAGTGTCTGAGCAGGCAGTGTGGGCCCTTGGGAATATCGCTGACAGAAAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
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| CDS GCA 72 bp | CCTGCCTTTGCCTCCCGTGTGCTGGGAGTAAAGATCTaGACCTGCGTGTCTGGCATCTTTCTGTCAGCGATA | + |
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Preference number: 6 (lower is better) Translates to: PAFASRVLGVKI*TCVSGIFLSAI Trigger: TATCGCTGACAGAAAGATGCCAGACACGCAGGTGCAGATCTTTACTCCCAGCACACGGGAGGCAAAGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
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| CDS CCA 72 bp | CCGTGTGCTGGGAGTAAAGATCTGCACCTGCGTGTCTaGCATCTTTCTGTCAGCGATATTCCCAAGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PCAGSKDLHLRV*HLSVSDIPKGP Trigger: TGGGCCCTTGGGAATATCGCTGACAGAAAGATGCCAGACACGCAGGTGCAGATCTTTACTCCCAGCACACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
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| CDS GCA 72 bp | AGGTCTACCAAAATAGGCAGCAAGTTACACAAAAGCTaGTCCACTTGGTGTCTGGGCCCAGCGGCCACGTTG | + |
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Preference number: 6 (lower is better) Translates to: RSTKIGSKLHKS*STWCLGPAATL Trigger: CAACGTGGCCGCTGGGCCCAGACACCAAGTGGAGCAGCTTTTGTGTAACTTGCTGCCTATTTTGGTAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
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| CDS CCA 72 bp | AGAGGGGAGGTAGCATCTGCCGCACGGCGCTCTCACTaGGATATGGATCTTTGTTTCGGCATAAGTTGGACA | + |
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Preference number: 6 (lower is better) Translates to: RGEVASAARRSH*DMDLCFGISWT Trigger: TGTCCAACTTATGCCGAAACAAAGATCCATATCCCAGTGAGAGCGCCGTGCGGCAGATGCTACCTCCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
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| CDS CCA 72 bp | AAAATAGGCAGCAAGTTACACAAAAGCTGCTCCACTTaGTGTCTGGGCCCAGCGGCCACGTTGCTCATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: KIGSKLHKSCST*CLGPAATLLMV Trigger: GACCATGAGCAACGTGGCCGCTGGGCCCAGACACCAAGTGGAGCAGCTTTTGTGTAACTTGCTGCCTATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
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| CDS CAA 72 bp | CAAAATAGGCAGCAAGTTACACAAAAGCTGCTCCACTaGGTGTCTGGGCCCAGCGGCCACGTTGCTCATGGT | + |
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Preference number: 6 (lower is better) Translates to: QNRQQVTQKLLH*VSGPSGHVAHG Trigger: ACCATGAGCAACGTGGCCGCTGGGCCCAGACACCAAGTGGAGCAGCTTTTGTGTAACTTGCTGCCTATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
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| CDS TCA 72 bp | AAGATTCCCGAGTGGGCAAGCAGAGTCAGCTGGTCCTaGGAGGCTCCTGTTGCAATGTTAATCACAGTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: KIPEWASRVSWS*EAPVAMLITVH Trigger: GTGCACTGTGATTAACATTGCAACAGGAGCCTCTCAGGACCAGCTGACTCTGCTTGCCCACTCGGGAATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
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| CDS GCA 72 bp | GCCTCAATAATCAAATTGAGAGGAGGGGTATTTTCCTaGGAGATCATTTCCCTGGCAGCCCGGGTAGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: ASIIKLRGGVFS*EIISLAARVAR Trigger: TCGGGCTACCCGGGCTGCCAGGGAAATGATCTCGCAGGAAAATACCCCTCCTCTCAATTTGATTATTGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 ENSMUST00000139024.8 |
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| CDS GCA 72 bp | TTTGCCTCCCGTGTGCTGGGAGTAAAGATCTGCACCTaGGTGTCTGGCATCTTTCTGTCAGCGATATTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: FASRVLGVKICT*VSGIFLSAIFP Trigger: TGGGAATATCGCTGACAGAAAGATGCCAGACACGCAGGTGCAGATCTTTACTCCCAGCACACGGGAGGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
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| CDS GCA 72 bp | GGAGATGACACAGTCTCTGAATTCTGCACAGTCTCCTaGCTTTGCCTCCCGTGTGCTGGGAGTAAAGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GDDTVSEFCTVS*LCLPCAGSKDL Trigger: CAGATCTTTACTCCCAGCACACGGGAGGCAAAGGCAGGAGACTGTGCAGAATTCAGAGACTGTGTCATCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
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| CDS CCA 72 bp | CCCAACACCTTCAGCATGCCAGCATCGATAGCCATCTaGGTCTGTTCATCTGTTCCTGCCACAATGTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PNTFSMPASIAI*VCSSVPATMLP Trigger: AGGCAACATTGTGGCAGGAACAGATGAACAGACCCAGATGGCTATCGATGCTGGCATGCTGAAGGTGTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
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| CDS GCA 72 bp | ACCGCTTGGATGATGTCGTCCAGAGTGAAGTTGACCTaGTCATCTTTCCTGGTCTTCCGGAGTTGTAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: TAWMMSSRVKLT*SSFLVFRSCRL Trigger: CAGTCTACAACTCCGGAAGACCAGGAAAGATGAGCAGGTCAACTTCACTCTGGACGACATCATCCAAGCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139024.8 |
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| CDS GCA 72 bp | GATGGCATTATTGGAGATGACACAGTCTCTGAATTCTaGACAGTCTCCAGCGATATTCCCAAGGGCCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: DGIIGDDTVSEF*TVSSDIPKGPH Trigger: GTGTGGGCCCTTGGGAATATCGCTGGAGACTGTGCAGAATTCAGAGACTGTGTCATCTCCAATAATGCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000116454.10 |
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| CDS CAA 72 bp | CTATTCACCGCTTGGATGATGTCGTCCAGAGTGAAGTaGACCTGCTCATCTTTCCTGGTCTTCCGGAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LFTAWMMSSRVK*TCSSFLVFRSC Trigger: ACAACTCCGGAAGACCAGGAAAGATGAGCAGGTCAACTTCACTCTGGACGACATCATCCAAGCGGTGAATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139024.8 |
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| CDS CCA 72 bp | CCTGCTCATCTTTCCTGGTCTTCCGGAGTTGTAGACTaGAAGCAATCCTCTGTTGTCGTGGCAATGACATTT | + |
|
Preference number: 6 (lower is better) Translates to: PAHLSWSSGVVD*KQSSVVVAMTF Trigger: AAATGTCATTGCCACGACAACAGAGGATTGCTTCCAGTCTACAACTCCGGAAGACCAGGAAAGATGAGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 ENSMUST00000139024.8 |
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| CDS CAA 90 bp | GGTATGCCTTTTGAAATAAGGTTGATCAGGTGTGGGATGGCATTATaGGAGATGACACAGTCTCTGAATTCTGCACAGTCTCCAGCGATA | + |
|
Preference number: 6 (lower is better) Translates to: GMPFEIRLIRCGMAL*EMTQSLNSAQSPAI Trigger: TATCGCTGGAGACTGTGCAGAATTCAGAGACTGTGTCATCTCCAATAATGCCATCCCACACCTGATCAACCTTATTTCAAAAGGCATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110672.8 ENSMUST00000116454.10 |
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| CDS CAA 90 bp | GGTATGCCTTTTGAAATAAGGTTGATCAGGTGTGGGATGGCATTATaGGAGATGACACAGTCTCTGAATTCTGCACAGTCTCCTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GMPFEIRLIRCGMAL*EMTQSLNSAQSPAF Trigger: AAAGGCAGGAGACTGTGCAGAATTCAGAGACTGTGTCATCTCCAATAATGCCATCCCACACCTGATCAACCTTATTTCAAAAGGCATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110673.8 |
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| CDS GCA 72 bp | AAGCAATCCTCTGTTGTCGTGGCAATGACATTTCTTTaGCTCGGTACTTATAGTTCTTCAGCCTCTCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: KQSSVVVAMTFL*LGTYSSSASLW Trigger: CCAAAGAGAGGCTGAAGAACTATAAGTACCGAGGCAAAGAAATGTCATTGCCACGACAACAGAGGATTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 ENSMUST00000139024.8 ENSMUST00000151196.2 |
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| CDS CAA 72 bp | CTCTCACTGGGATATGGATCTTTGTTTCGGCATAAGTaGGACAAAGTCCATGAGATGTTCCGAAGAAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSLGYGSLFRHK*DKVHEMFRRNV Trigger: CACATTTCTTCGGAACATCTCATGGACTTTGTCCAACTTATGCCGAAACAAAGATCCATATCCCAGTGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
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| CDS CCA 72 bp | GTTGCAATGTTAATCACAGTGCACACAACCTCCTTCTaGACTTTTAATTCTGCATTCCTTAGTAGGTCTACC | + |
|
Preference number: 6 (lower is better) Translates to: VAMLITVHTTSF*TFNSAFLSRST Trigger: GGTAGACCTACTAAGGAATGCAGAATTAAAAGTCCAGAAGGAGGTTGTGTGCACTGTGATTAACATTGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110672.8 ENSMUST00000110673.8 ENSMUST00000116454.10 |
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