Pregenerated sensors for KPNA6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003731Ensembl transcript IDs: ENSMUST00000003828.11, ENSMUST00000102590.11, ENSMUST00000126010.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGTGGCTGCTCTCCTGCCCACCAGAAGGCTGCTCCTCTCTCTGCTaGCTGCTGGTGCTTCCCGTGCCCTCCCCTCCCCGGAGGCAGACA | + |
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Preference number: 1 (lower is better) Translates to: GWLLSCPPEGCSSLC*LLVLPVPSPPRRQT Trigger: TGTCTGCCTCCGGGGAGGGGAGGGCACGGGAAGCACCAGCAGCCAGCAGAGAGAGGAGCAGCCTTCTGGTGGGCAGGAGAGCAGCCACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| 3UTR CCA 90 bp | GTGGGGGATCACCACAGCAGGGCACTGTGCTGCCACCTCCACAGGTaGTCTGCCCAGCTGACACTGTACCCAGCTCCCAGAGCTTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: VGDHHSRALCCHLHR*SAQLTLYPAPRAWF Trigger: AAACCAAGCTCTGGGAGCTGGGTACAGTGTCAGCTGGGCAGACCACCTGTGGAGGTGGCAGCACAGTGCCCTGCTGTGGTGATCCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR CCA 90 bp | CTGGAACAGGAGGAACAGTGCTGTTCTAGAGAGCGGCTAAGGGTGTaGGGGATCACCACAGCAGGGCACTGTGCTGCCACCTCCACAGGT | + |
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Preference number: 1 (lower is better) Translates to: LEQEEQCCSRERLRV*GITTAGHCAATSTG Trigger: ACCTGTGGAGGTGGCAGCACAGTGCCCTGCTGTGGTGATCCCCCACACCCTTAGCCGCTCTCTAGAACAGCACTGTTCCTCCTGTTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR CCA 90 bp | AAAAGGCTACAACCAACATCCAGGGCCATGATCACTGGGGAGGGCTaGAAACTGAAGTCAGTCGGCCAGGAGCCGACTGTGAGGGACACC | + |
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Preference number: 1 (lower is better) Translates to: KRLQPTSRAMITGEG*KLKSVGQEPTVRDT Trigger: GGTGTCCCTCACAGTCGGCTCCTGGCCGACTGACTTCAGTTTCCAGCCCTCCCCAGTGATCATGGCCCTGGATGTTGGTTGTAGCCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR GCA 90 bp | AACAGGGTCAGTAGCTACACAGGAGAAGCCCTGTCTAAAGGCCTGTaGCCCTCCCTTCCACTCCACTGGTATACTTGCTCCAGGAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: NRVSSYTGEALSKGL*PSLPLHWYTCSRRV Trigger: CACTCTCCTGGAGCAAGTATACCAGTGGAGTGGAAGGGAGGGGCACAGGCCTTTAGACAGGGCTTCTCCTGTGTAGCTACTGACCCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR GCA 90 bp | TGCAAATGTGGGGCACAGAGAGATCTGCTGGAACAGGAGGAACAGTaGTGTTCTAGAGAGCGGCTAAGGGTGTGGGGGATCACCACAGCA | + |
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Preference number: 1 (lower is better) Translates to: CKCGAQRDLLEQEEQ*CSRERLRVWGITTA Trigger: TGCTGTGGTGATCCCCCACACCCTTAGCCGCTCTCTAGAACAGCACTGTTCCTCCTGTTCCAGCAGATCTCTCTGTGCCCCACATTTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR CCA 90 bp | AACGGGCAGAGGAAAGCAGGACATTTGTGTCTCATGCTGAGGATCTaGCTCCAGGGCCAGGGTCCTAACTGTCACTTGAGAGGTTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: NGQRKAGHLCLMLRI*LQGQGPNCHLRGSG Trigger: CCCTGAACCTCTCAAGTGACAGTTAGGACCCTGGCCCTGGAGCCAGATCCTCAGCATGAGACACAAATGTCCTGCTTTCCTCTGCCCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR TCA 90 bp | CAGGAGTGCAGGGTGAGTGGGCATCATCAGCTTTGTGTGCTAGTGTaGGCATCAGAAGTCAGGCTGGCCTACAAGCAGGTAGGTAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: QECRVSGHHQLCVLV*ASEVRLAYKQVGKP Trigger: AGGCTTACCTACCTGCTTGTAGGCCAGCCTGACTTCTGATGCTCACACTAGCACACAAAGCTGATGATGCCCACTCACCCTGCACTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR GCA 90 bp | CACGCAGAAGCACCGTCTTTTCCTCTCCCTCAGCTAAAATCCCACTaGAGCTCTAGCCCACAGTTAGCTTCAGAACATAGGCTACTGGGG | + |
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Preference number: 1 (lower is better) Translates to: HAEAPSFPLPQLKSH*SSSPQLASEHRLLG Trigger: CCCCAGTAGCCTATGTTCTGAAGCTAACTGTGGGCTAGAGCTGCAGTGGGATTTTAGCTGAGGGAGAGGAAAAGACGGTGCTTCTGCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR GCA 90 bp | CTAGAATGTGCCAGGAAGCCTGTCTCTTACCACCTCTCAGGGAAGTaGGGCTTGAAGCTGCCACTGCTCAGAATCTATAGTTCAGTGCAC | + |
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Preference number: 1 (lower is better) Translates to: LECARKPVSYHLSGK*GLKLPLLRIYSSVH Trigger: GTGCACTGAACTATAGATTCTGAGCAGTGGCAGCTTCAAGCCGCACTTCCCTGAGAGGTGGTAAGAGACAGGCTTCCTGGCACATTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR CCA 90 bp | AGCACCTTGCCTTCCCGGAAGGCACTCGCCAGCGTGGTCCAATGTTaGTTGAACTTTTCAGTATTAACTGCCTGCCCTGAAGAGGAATCT | + |
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Preference number: 1 (lower is better) Translates to: STLPSRKALASVVQC*LNFSVLTACPEEES Trigger: AGATTCCTCTTCAGGGCAGGCAGTTAATACTGAAAAGTTCAACCAACATTGGACCACGCTGGCGAGTGCCTTCCGGGAAGGCAAGGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR CCA 90 bp | AACAGAGAGAGCAGCAGACTCCATCAGGCCTTGCTCCCTTCAGGCTaGGAACAATCAGACCCAGCTGATTTACTTCATAAAGGTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: NRESSRLHQALLPSG*EQSDPADLLHKGSR Trigger: TCTGGAACCTTTATGAAGTAAATCAGCTGGGTCTGATTGTTCCCAGCCTGAAGGGAGCAAGGCCTGATGGAGTCTGCTGCTCTCTCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR CCA 90 bp | CTAAACAGAAACCTTAACGTCAGAGCCACAGGAGTGCAGGGTGAGTaGGCATCATCAGCTTTGTGTGCTAGTGTGAGCATCAGAAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: LNRNLNVRATGVQGE*ASSALCASVSIRSQ Trigger: CTGACTTCTGATGCTCACACTAGCACACAAAGCTGATGATGCCCACTCACCCTGCACTCCTGTGGCTCTGACGTTAAGGTTTCTGTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR CCA 90 bp | CTTACCTGGAAACCCCAAGCTGTCCCTGGGCGATGTTCCATCTGCTaGGTAGCTGAGACCTCATACCCACTTCATTTATATAACAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: LTWKPQAVPGRCSIC*VAETSYPLHLYNRS Trigger: TGACCTGTTATATAAATGAAGTGGGTATGAGGTCTCAGCTACCCAGCAGATGGAACATCGCCCAGGGACAGCTTGGGGTTTCCAGGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR GCA 90 bp | GGATTCATGACTATCCCGATACACGACACTAACTCCAACCTCCTCTaGAACTTAGGGGTCATCAGAGCAAGGACTTTCTCCTCAGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: GFMTIPIHDTNSNLL*NLGVIRARTFSSGE Trigger: TTCTCCTGAGGAGAAAGTCCTTGCTCTGATGACCCCTAAGTTGCAGAGGAGGTTGGAGTTAGTGTCGTGTATCGGGATAGTCATGAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR TCA 90 bp | TGGTCCCAAGTGGTGGCCCAGAATACAAGCAGAGAAAATAAGGACTaGGTTCAGCCCTGTGAGCAGAAACTTGTTCGTCTTTCTGGTCTT | + |
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Preference number: 1 (lower is better) Translates to: WSQVVAQNTSRENKD*VQPCEQKLVRLSGL Trigger: AAGACCAGAAAGACGAACAAGTTTCTGCTCACAGGGCTGAACTCAGTCCTTATTTTCTCTGCTTGTATTCTGGGCCACCACTTGGGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR CCA 90 bp | AGAAACACACTTCCTCTGTGTGGGAAGTGTGTCTTTGTACCGGCTTaGTTTCAAAGAAAGAAACTCCACGCAGAAGCACCGTCTTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: RNTLPLCGKCVFVPA*FQRKKLHAEAPSFP Trigger: AGGAAAAGACGGTGCTTCTGCGTGGAGTTTCTTTCTTTGAAACCAAGCCGGTACAAAGACACACTTCCCACACAGAGGAAGTGTGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR CCA 90 bp | TGCAAATTGATTACCTCAGTCCTCCTTTGTCTACCCCTGGGCTCCTaGGTTAAAGACATGTGCAGCCAAAATAGTGTAAGGAAGAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: CKLITSVLLCLPLGS*VKDMCSQNSVRKRN Trigger: GTTTCTCTTCCTTACACTATTTTGGCTGCACATGTCTTTAACCCAGGAGCCCAGGGGTAGACAAAGGAGGACTGAGGTAATCAATTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| 3UTR TCA 90 bp | CTCAGAGGTTCATTCAACTCTGAGGTGAATTTTCAAGTAAACAAATaGAGTTGGGTCGCACCATTTAGGAGGTGGGTAGGAAACAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: LRGSFNSEVNFQVNK*SWVAPFRRWVGNRV Trigger: GACCCTGTTTCCTACCCACCTCCTAAATGGTGCGACCCAACTTCATTTGTTTACTTGAAAATTCACCTCAGAGTTGAATGAACCTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR CCA 90 bp | ATTTACTTCATAAAGGTTCCAGAAGTGAGAGTTGGTCCCAAGTGGTaGCCCAGAATACAAGCAGAGAAAATAAGGACTGAGTTCAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: IYFIKVPEVRVGPKW*PRIQAEKIRTEFSP Trigger: AGGGCTGAACTCAGTCCTTATTTTCTCTGCTTGTATTCTGGGCCACCACTTGGGACCAACTCTCACTTCTGGAACCTTTATGAAGTAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR CCA 90 bp | CTGATTTACTTCATAAAGGTTCCAGAAGTGAGAGTTGGTCCCAAGTaGTGGCCCAGAATACAAGCAGAGAAAATAAGGACTGAGTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: LIYFIKVPEVRVGPK*WPRIQAEKIRTEFS Trigger: GCTGAACTCAGTCCTTATTTTCTCTGCTTGTATTCTGGGCCACCACTTGGGACCAACTCTCACTTCTGGAACCTTTATGAAGTAAATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR TCA 90 bp | CAAGCTCAGGAGAAAACACAGCCACCTCAGAGGTTCATTCAACTCTaGGGTGAATTTTCAAGTAAACAAATGAAGTTGGGTCGCACCATT | + |
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Preference number: 1 (lower is better) Translates to: QAQEKTQPPQRFIQL*GEFSSKQMKLGRTI Trigger: AATGGTGCGACCCAACTTCATTTGTTTACTTGAAAATTCACCTCAGAGTTGAATGAACCTCTGAGGTGGCTGTGTTTTCTCCTGAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGGCGCTTGCTCCCTCCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCGGTGTGCGGGGCTGCTaGTGGGGTGGCTGCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: QRALAPSREGDEQVESTVGVRGC*WGGCSP Trigger: AGGAGAGCAGCCACCCCACCAGCAGCCCCGCACACC...GACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGGAGGGAGCAAGCGCCCTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| 3UTR-3UTR GCA 90 bp | CCTCCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTTGCTGGTGGGGTGGCTaGTCTCCTGCCCACCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: PPGKGMNRSRAQSRGSRCCWWGG*SPAHQK Trigger: CTTCTGGTGGGCAGGAGAGCAGCCACCCCACCAGCA...ACACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGCAGAAAGGGGAAGTGGTAGATACAAGGTCCCGGGTAAAGGGGACACCAGTGCGGGGCTGCTGGTaGGGTGGCTGCTCTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GQQKGEVVDTRSRVKGTPVRGCW*GGCSPA Trigger: GGCAGGAGAGCAGCCACCCCACCAGCAGCCCCGCAC...TGGTGTCCCCTTTACCCGGGACCTTGTATCTACCACTTCCCCTTTCTGCTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGGCGCTTGCTCCCTCCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTGCCCACCAGAAGGCTaGTCCTCTCTCTGCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: QRALAPSREGDEQVESTVCPPEG*SSLCWL Trigger: CAGCCAGCAGAGAGAGGAGCAGCCTTCTGGTGGGCA...GACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGGAGGGAGCAAGCGCCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| 3UTR-3UTR CCA 90 bp | TTGATTACCTCAGTCCTCCTTTGTCTACCCCTGGGCTCCTGGGTTAAAGACATGGTGCGGGGCTGCTGGTaGGGTGGCTGCTCTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LITSVLLCLPLGSWVKDMVRGCW*GGCSPA Trigger: GGCAGGAGAGCAGCCACCCCACCAGCAGCCCCGCAC...CATGTCTTTAACCCAGGAGCCCAGGGGTAGACAAAGGAGGACTGAGGTAATCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| 3UTR-3UTR GCA 90 bp | GTCTGCCCAGCTGACACTGTACCCAGCTCCCAGAGCTTGGTTTTAGTGTACTGTCCTCTCTCTGCTGGCTaGTGGTGCTTCCCGTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: VCPADTVPSSQSLVLVYCPLSAG*WCFPCP Trigger: AGGGCACGGGAAGCACCAGCAGCCAGCAGAGAGAGG...ACAGTACACTAAAACCAAGCTCTGGGAGCTGGGTACAGTGTCAGCTGGGCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGATGGGGCTGCTGGTGGGGTaGCTGCTCTCCTGCCCACCA | + |
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Preference number: 2 (lower is better) Translates to: RETHTSPSCLKTQCEPQMGLLVG*LLSCPP Trigger: TGGTGGGCAGGAGAGCAGCCACCCCACCAGCAGCCC...CATCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| 3UTR-3UTR GCA 90 bp | GCTTGGTTTCAAAGAAAGAAACTCCACGCAGAAGCACCGTCTTTTCCTCTCCCTGCAGGTGTGCGGGGCTaGTGGTGGGGTGGCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: AWFQRKKLHAEAPSFPLPAGVRG*WWGGCS Trigger: AGAGCAGCCACCCCACCAGCAGCCCCGCACACCTGC...AGGGAGAGGAAAAGACGGTGCTTCTGCGTGGAGTTTCTTTCTTTGAAACCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCAGAATCTATAGTTCAGTGCACCTAGCCTTGCACACTTCCCCAGCCTGCAGCAGGGCACTGTGCTaGCACCTCCACAGGTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: LLRIYSSVHLALHTSPACSRALC*HLHRWS Trigger: AGACCACCTGTGGAGGTGGCAGCACAGTGCCCTGCT...GCAGGCTGGGGAAGTGTGCAAGGCTAGGTGCACTGAACTATAGATTCTGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR GCA 90 bp | AGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGATGCCTCTCTCTGCTGGCTaGTGGTGCTTCCCGTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: RETHTSPSCLKTQCEPQMPLSAG*WCFPCP Trigger: AGGGCACGGGAAGCACCAGCAGCCAGCAGAGAGAGG...CATCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| 3UTR-3UTR GCA 90 bp | AAGGTGCAAATTGATTACCTCAGTCCTCCTTTGTCTACCCCTGGGCTCCTGGGTTGCCCACCAGAAGGCTaGTCCTCTCTCTGCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: KVQIDYLSPPLSTPGLLGCPPEG*SSLCWL Trigger: CAGCCAGCAGAGAGAGGAGCAGCCTTCTGGTGGGCA...ACCCAGGAGCCCAGGGGTAGACAAAGGAGGACTGAGGTAATCAATTTGCACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| 3UTR-3UTR GCA 90 bp | AAGCTGCCACTGCTCAGAATCTATAGTTCAGTGCACCTAGCCTTGCACACTTCCTGTCCAGAGGGCGCTTaGTCCCTCCAGGGAAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: KLPLLRIYSSVHLALHTSCPEGA*SLQGRG Trigger: TCCCCTTCCCTGGAGGGAGCAAGCGCCCTCTGGACA...GGAAGTGTGCAAGGCTAGGTGCACTGAACTATAGATTCTGAGCAGTGGCAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGATGCTTTTTGCTTGGGAGCAAGGAACAGAGAGAGCAGCAGACTCCATCCTGTCTAAAGGCCTGTaGCCCTCCCTTCCACTCCAC | + |
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Preference number: 2 (lower is better) Translates to: GRMLFAWEQGTERAADSILSKGL*PSLPLH Trigger: GTGGAGTGGAAGGGAGGGGCACAGGCCTTTAGACAG...GATGGAGTCTGCTGCTCTCTCTGTTCCTTGCTCCCAAGCAAAAAGCATCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGATGTGCTCCTCTCTCTGCTaGCTGCTGGTGCTTCCCGTG | + |
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Preference number: 2 (lower is better) Translates to: RETHTSPSCLKTQCEPQMCSSLC*LLVLPV Trigger: CACGGGAAGCACCAGCAGCCAGCAGAGAGAGGAGCA...CATCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| 3UTR CAA 90 bp | ACTAGGAGCAGTTTCAGTCAGGTTAAAAACAAAAGGGCCAGCACCTaGCCTTCCCGGAAGGCACTCGCCAGCGTGGTCCAATGTTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: TRSSFSQVKNKRAST*PSRKALASVVQCWL Trigger: CAACCAACATTGGACCACGCTGGCGAGTGCCTTCCGGGAAGGCAAGGTGCTGGCCCTTTTGTTTTTAACCTGACTGAAACTGCTCCTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR CAA 90 bp | CTGAAGCCAGAGATAATGGAAAACGGGCAGAGGAAAGCAGGACATTaGTGTCTCATGCTGAGGATCTGGCTCCAGGGCCAGGGTCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: LKPEIMENGQRKAGH*CLMLRIWLQGQGPN Trigger: GTTAGGACCCTGGCCCTGGAGCCAGATCCTCAGCATGAGACACAAATGTCCTGCTTTCCTCTGCCCGTTTTCCATTATCTCTGGCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR TCA 90 bp | ATATGGGTCAGAGCAAGAACACTTTGTTTGGGACTTCTCCCCTCCCCTCCCACCTCTCAAAACCCAATGTaGGCCTCAGATGGTTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: IWVRARTLCLGLLPSPPTSQNPM*ASDGSV Trigger: GACAGAACCATCTGAGGCTCACATTGGGTTTTGAGA...GGTGGGAGGGGAGGGGAGAAGTCCCAAACAAAGTGTTCTTGCTCTGACCCATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCGGTCTCAGTCTTCCTTCACAGTTCCCTGCACATGCTACACAGTTCTTTCTGAGTTCAGCCCTGTaGGCAGAAACTTGTTCGTCT | + |
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Preference number: 2 (lower is better) Translates to: PGGLSLPSQFPAHATQFFLSSAL*AETCSS Trigger: AGACGAACAAGTTTCTGCTCACAGGGCTGAACTCAG...AAAGAACTGTGTAGCATGTGCAGGGAACTGTGAAGGAAGACTGAGACCGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR CCA 90 bp | GCTTGGTTTCAAAGAAAGAAACTCCACGCAGAAGCACCGTCTTTTCCTCTCCCTATCACTGGGGAGGGCTaGAAACTGAAGTCAGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: AWFQRKKLHAEAPSFPLPITGEG*KLKSVG Trigger: GCCGACTGACTTCAGTTTCCAGCCCTCCCCAGTGAT...AGGGAGAGGAAAAGACGGTGCTTCTGCGTGGAGTTTCTTTCTTTGAAACCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR TCA 90 bp | CAGTTCCCTGCACATGCTACACAGTTCTTTTCTCTAAACAGAAACCTTAACGTCGCCAGGAGCCGACTGTaGGGGACACCTAGAGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: QFPAHATQFFSLNRNLNVARSRL*GTPRVE Trigger: CTCTACTCTAGGTGTCCCTCACAGTCGGCTCCTGGC...GACGTTAAGGTTTCTGTTTAGAGAAAAGAACTGTGTAGCATGTGCAGGGAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR GCA 90 bp | GTCTGCCCAGCTGACACTGTACCCAGCTCCCAGAGCTTGGTTTTAGTGTACTGTAGGGAGAAAGGGAAATaGAAGCTAGGTACAAGGATC | + |
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Preference number: 2 (lower is better) Translates to: VCPADTVPSSQSLVLVYCREKGK*KLGTRI Trigger: GATCCTTGTACCTAGCTTGCATTTCCCTTTCTCCCT...ACAGTACACTAAAACCAAGCTCTGGGAGCTGGGTACAGTGTCAGCTGGGCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR CAA 90 bp | CAGAAACACACTTCCTCTGTGTGGGAAGTGTGTCTTTGTACCGGCTaGGTTTCAAAGAAAGAAACTCCACGCAGAAGCACCGTCTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: QKHTSSVWEVCLCTG*VSKKETPRRSTVFS Trigger: GGAAAAGACGGTGCTTCTGCGTGGAGTTTCTTTCTTTGAAACCAAGCCGGTACAAAGACACACTTCCCACACAGAGGAAGTGTGTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR TCA 90 bp | CAGCCCTGTGAGCAGAAACTTGTTCGTCTTTCTGGTCTTCCTCACAGTATCCCAGAGGACTGGGATGGATaGAGAAAGATAATTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: QPCEQKLVRLSGLPHSIPEDWDG*RKIIGK Trigger: CTTCCCAATTATCTTTCTTCATCCATCCCAGTCCTC...TGGGATACTGTGAGGAAGACCAGAAAGACGAACAAGTTTCTGCTCACAGGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGATGCTTTTTGCTTGGGAGCAAGGAACAGAGAGAGCAGCAGACTCCATCTGGGTTAAAGACATGTaGAGCCAAAATAGTGTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GRMLFAWEQGTERAADSIWVKDM*SQNSVR Trigger: CCTTACACTATTTTGGCTGCACATGTCTTTAACCCA...GATGGAGTCTGCTGCTCTCTCTGTTCCTTGCTCCCAAGCAAAAAGCATCCTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR-3UTR CCA 90 bp | TTGGTTTCAAAGAAAGAAACTCCACGCAGAAGCACCGTCTTTTCCTCTCCCTCACCCACCTCCCACCTCTaGAATATTCCATCTGCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: LVSKKETPRRSTVFSSPSPTSHL*NIPSAQ Trigger: TTGAGCAGATGGAATATTCCAGAGGTGGGAGGTGGG...TGAGGGAGAGGAAAAGACGGTGCTTCTGCGTGGAGTTTCTTTCTTTGAAACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTCAGGAGAAAACACAGCCACCTCAGAGGTTCATTCAACTCTGAGGTGAATCAAGAACACTTTGTTTaGGACTTCTCCCCTCCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: KLRRKHSHLRGSFNSEVNQEHFV*DFSPPL Trigger: GAGGGGAGGGGAGAAGTCCCAAACAAAGTGTTCTTG...ATTCACCTCAGAGTTGAATGAACCTCTGAGGTGGCTGTGTTTTCTCCTGAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCAGGCAGACAGAAACACACTTCCTCTGTGTGGGAAGTGTGTCTTTGTACCTACATGATCCAGCTATaGCAGAAGGAAGAAGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SAGRQKHTSSVWEVCLCTYMIQL*QKEEER Trigger: CCTTTCTTCTTCCTTCTGCCATAGCTGGATCATGTA...GGTACAAAGACACACTTCCCACACAGAGGAAGTGTGTTTCTGTCTGCCTGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR-3UTR TCA 90 bp | CTTCAGGCTGGGAACAATCAGACCCAGCTGATTTACTTCATAAAGGTTCCAGAAAAAGGCAGGGATTCATaGCTATCCCGATACACGACA | + |
|
Preference number: 2 (lower is better) Translates to: LQAGNNQTQLIYFIKVPEKGRDS*LSRYTT Trigger: TGTCGTGTATCGGGATAGTCATGAATCCCTGCCTTT...TTCTGGAACCTTTATGAAGTAAATCAGCTGGGTCTGATTGTTCCCAGCCTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR-3UTR TCA 90 bp | CTTCAGGCTGGGAACAATCAGACCCAGCTGATTTACTTCATAAAGGTTCCAGAATTTAAAGGTGCAAATTaGTTACCTCAGTCCTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LQAGNNQTQLIYFIKVPEFKGAN*LPQSSF Trigger: AAAGGAGGACTGAGGTAATCAATTTGCACCTTTAAA...TTCTGGAACCTTTATGAAGTAAATCAGCTGGGTCTGATTGTTCCCAGCCTGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR GCA 72 bp | CAGCAGGGCACTGTGCTGCCACCTCCACAGGTGGTCTaGCCAGCTGACACTGTACCCAGCTCCCAGAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QQGTVLPPPQVV*PADTVPSSQSL Trigger: CAAGCTCTGGGAGCTGGGTACAGTGTCAGCTGGGCAGACCACCTGTGGAGGTGGCAGCACAGTGCCCTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CCA 72 bp | GAGGAACAGTGCTGTTCTAGAGAGCGGCTAAGGGTGTaGGGGATCACCACAGCAGGGCACTGTGCTGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: EEQCCSRERLRV*GITTAGHCAAT Trigger: GGTGGCAGCACAGTGCCCTGCTGTGGTGATCCCCCACACCCTTAGCCGCTCTCTAGAACAGCACTGTTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CCA 72 bp | CAACCAACATCCAGGGCCATGATCACTGGGGAGGGCTaGAAACTGAAGTCAGTCGGCCAGGAGCCGACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QPTSRAMITGEG*KLKSVGQEPTV Trigger: CACAGTCGGCTCCTGGCCGACTGACTTCAGTTTCCAGCCCTCCCCAGTGATCATGGCCCTGGATGTTGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR CAA 90 bp | CAGCCCTGTGAGCAGAAACTTGTTCGTCTTTCTGGTCTTCCTCACAGTATCCCACTGTCCAGAGGGCGCTaGCTCCCTCCAGGGAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QPCEQKLVRLSGLPHSIPLSRGR*LPPGKG Trigger: CCCCTTCCCTGGAGGGAGCAAGCGCCCTCTGGACAG...TGGGATACTGTGAGGAAGACCAGAAAGACGAACAAGTTTCTGCTCACAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR GCA 72 bp | GGGGCACAGAGAGATCTGCTGGAACAGGAGGAACAGTaGTGTTCTAGAGAGCGGCTAAGGGTGTGGGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: GAQRDLLEQEEQ*CSRERLRVWGI Trigger: GATCCCCCACACCCTTAGCCGCTCTCTAGAACAGCACTGTTCCTCCTGTTCCAGCAGATCTCTCTGTGCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCTGTGAGCAGAAACTTGTTCGTCTTTCTGGTCTTCCTCACAGTATCCCAGGGAGGGAGGGATCTTaGTCTCATGGGGGCCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: QPCEQKLVRLSGLPHSIPGREGS*SHGGLP Trigger: GGGGAGGCCCCCATGAGACAAAGATCCCTCCCTCCC...TGGGATACTGTGAGGAAGACCAGAAAGACGAACAAGTTTCTGCTCACAGGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR TCA 72 bp | ACGGGCAGAGGAAAGCAGGACATTTGTGTCTCATGCTaGGGATCTGGCTCCAGGGCCAGGGTCCTAACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: TGRGKQDICVSC*GSGSRARVLTV Trigger: GACAGTTAGGACCCTGGCCCTGGAGCCAGATCCTCAGCATGAGACACAAATGTCCTGCTTTCCTCTGCCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR GCA 72 bp | CAAGGAACAGAGAGAGCAGCAGACTCCATCAGGCCTTaGTCCCTTCAGGCTGGGAACAATCAGACCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QGTERAADSIRP*SLQAGNNQTQL Trigger: CAGCTGGGTCTGATTGTTCCCAGCCTGAAGGGAGCAAGGCCTGATGGAGTCTGCTGCTCTCTCTGTTCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGCGGTCTCAGTCTTCCTTCACAGTTCCCTGCACATGCTACACAGTTCTTTAAAAGGGCCAGCACCTaGCCTTCCCGGAAGGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: PGGLSLPSQFPAHATQFFKRAST*PSRKAL Trigger: GAGTGCCTTCCGGGAAGGCAAGGTGCTGGCCCTTTT...AAAGAACTGTGTAGCATGTGCAGGGAACTGTGAAGGAAGACTGAGACCGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR TCA 72 bp | GGATCTGGCTCCAGGGCCAGGGTCCTAACTGTCACTTaGGAGGTTCAGGGGTCTACTCTTCAGATAAGGACG | + |
|
Preference number: 3 (lower is better) Translates to: GSGSRARVLTVT*EVQGSTLQIRT Trigger: CGTCCTTATCTGAAGAGTAGACCCCTGAACCTCTCAAGTGACAGTTAGGACCCTGGCCCTGGAGCCAGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR GCA 72 bp | CTCCCCTCCCACCTCCCACCTCTGGAATATTCCATCTaGTCAAGTACCCAAGAGTTACACACGTCAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LPSHLPPLEYSI*SSTQELHTSGQ Trigger: CTGCCCTGACGTGTGTAACTCTTGGGTACTTGAGCAGATGGAATATTCCAGAGGTGGGAGGTGGGAGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| 3UTR GCA 72 bp | GTTTCAGTCAGGTTAAAAACAAAAGGGCCAGCACCTTaGCTTCCCGGAAGGCACTCGCCAGCGTGGTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: VSVRLKTKGPAP*LPGRHSPAWSN Trigger: ATTGGACCACGCTGGCGAGTGCCTTCCGGGAAGGCAAGGTGCTGGCCCTTTTGTTTTTAACCTGACTGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR GCA 72 bp | GCCAGGAAGCCTGTCTCTTACCACCTCTCAGGGAAGTaGGGCTTGAAGCTGCCACTGCTCAGAATCTATAGT | + |
|
Preference number: 3 (lower is better) Translates to: ARKPVSYHLSGK*GLKLPLLRIYS Trigger: ACTATAGATTCTGAGCAGTGGCAGCTTCAAGCCGCACTTCCCTGAGAGGTGGTAAGAGACAGGCTTCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR TCA 72 bp | AGCCTGTCTCTTACCACCTCTCAGGGAAGTGCGGCTTaGAGCTGCCACTGCTCAGAATCTATAGTTCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SLSLTTSQGSAA*SCHCSESIVQC Trigger: GCACTGAACTATAGATTCTGAGCAGTGGCAGCTTCAAGCCGCACTTCCCTGAGAGGTGGTAAGAGACAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CCA 72 bp | TTCAGATCTGCAAATGTGGGGCACAGAGAGATCTGCTaGAACAGGAGGAACAGTGCTGTTCTAGAGAGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: FRSANVGHREIC*NRRNSAVLESG Trigger: GCCGCTCTCTAGAACAGCACTGTTCCTCCTGTTCCAGCAGATCTCTCTGTGCCCCACATTTGCAGATCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CCA 72 bp | CCTTCCCGGAAGGCACTCGCCAGCGTGGTCCAATGTTaGTTGAACTTTTCAGTATTAACTGCCTGCCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSRKALASVVQC*LNFSVLTACPE Trigger: TTCAGGGCAGGCAGTTAATACTGAAAAGTTCAACCAACATTGGACCACGCTGGCGAGTGCCTTCCGGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CCA 72 bp | AGGAAAGCAGGACATTTGTGTCTCATGCTGAGGATCTaGCTCCAGGGCCAGGGTCCTAACTGTCACTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RKAGHLCLMLRI*LQGQGPNCHLR Trigger: TCTCAAGTGACAGTTAGGACCCTGGCCCTGGAGCCAGATCCTCAGCATGAGACACAAATGTCCTGCTTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR GCA 72 bp | GCACCGTCTTTTCCTCTCCCTCAGCTAAAATCCCACTaGAGCTCTAGCCCACAGTTAGCTTCAGAACATAGG | + |
|
Preference number: 3 (lower is better) Translates to: APSFPLPQLKSH*SSSPQLASEHR Trigger: CCTATGTTCTGAAGCTAACTGTGGGCTAGAGCTGCAGTGGGATTTTAGCTGAGGGAGAGGAAAAGACGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CCA 72 bp | CCAGCAGCAAGAACCTCAACTTCAGATCTGCAAATGTaGGGCACAGAGAGATCTGCTGGAACAGGAGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: PAARTSTSDLQM*GTERSAGTGGT Trigger: TGTTCCTCCTGTTCCAGCAGATCTCTCTGTGCCCCACATTTGCAGATCTGAAGTTGAGGTTCTTGCTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR GCA 72 bp | ACTATCCCGATACACGACACTAACTCCAACCTCCTCTaGAACTTAGGGGTCATCAGAGCAAGGACTTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TIPIHDTNSNLL*NLGVIRARTFS Trigger: GGAGAAAGTCCTTGCTCTGATGACCCCTAAGTTGCAGAGGAGGTTGGAGTTAGTGTCGTGTATCGGGATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CCA 72 bp | CCCAAGAGTTACACACGTCAGGGCAGAGGACTGGGATaGATGAAGAAAGATAATTGGGAAGGAAGTCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: PKSYTRQGRGLG*MKKDNWEGSHH Trigger: GTGGTGACTTCCTTCCCAATTATCTTTCTTCATCCATCCCAGTCCTCTGCCCTGACGTGTGTAACTCTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| 3UTR CCA 72 bp | CTTCCTCTGTGTGGGAAGTGTGTCTTTGTACCGGCTTaGTTTCAAAGAAAGAAACTCCACGCAGAAGCACCG | + |
|
Preference number: 3 (lower is better) Translates to: LPLCGKCVFVPA*FQRKKLHAEAP Trigger: CGGTGCTTCTGCGTGGAGTTTCTTTCTTTGAAACCAAGCCGGTACAAAGACACACTTCCCACACAGAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CCA 72 bp | AGCTCTGCAGGCAGACAGAAACACACTTCCTCTGTGTaGGAAGTGTGTCTTTGTACCGGCTTGGTTTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSAGRQKHTSSV*EVCLCTGLVSK Trigger: CTTTGAAACCAAGCCGGTACAAAGACACACTTCCCACACAGAGGAAGTGTGTTTCTGTCTGCCTGCAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR CAA 90 bp | CCAGGCGGTCTCAGTCTTCCTTCACAGTTCCCTGCACATGCTACACAGTTCTTTCAGCGTGGTCCAATGTaGGTTGAACTTTTCAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: PGGLSLPSQFPAHATQFFQRGPM*VELFSI Trigger: AATACTGAAAAGTTCAACCAACATTGGACCACGCTG...AAAGAACTGTGTAGCATGTGCAGGGAACTGTGAAGGAAGACTGAGACCGCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| 3UTR-3UTR CAA 90 bp | CCTAGCCTTGCACACTTCCCCAGCCTGCTAGGGAAGCTTGTCACTAACTATCCTTGTCTTTGTACCGGCTaGGTTTCAAAGAAAGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: PSLAHFPSLLGKLVTNYPCLCTG*VSKKET Trigger: AGTTTCTTTCTTTGAAACCAAGCCGGTACAAAGACA...AGGATAGTTAGTGACAAGCTTCCCTAGCAGGCTGGGGAAGTGTGCAAGGCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR TCA 72 bp | GTGGTGGCCCAGAATACAAGCAGAGAAAATAAGGACTaGGTTCAGCCCTGTGAGCAGAAACTTGTTCGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VVAQNTSRENKD*VQPCEQKLVRL Trigger: AAGACGAACAAGTTTCTGCTCACAGGGCTGAACTCAGTCCTTATTTTCTCTGCTTGTATTCTGGGCCACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR GCA 72 bp | TTCATTGTGGGTAACAGTGAGTTAGAGAAGGCAGGATaGTTTTTGCTTGGGAGCAAGGAACAGAGAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FIVGNSELEKAG*FLLGSKEQREQ Trigger: CTGCTCTCTCTGTTCCTTGCTCCCAAGCAAAAAGCATCCTGCCTTCTCTAACTCACTGTTACCCACAATGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR GCA 72 bp | GTTTCCAGGCGGTCTCAGTCTTCCTTCACAGTTCCCTaGACATGCTACACAGTTCTTTTCTCTAAACAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSRRSQSSFTVP*TCYTVLFSKQK Trigger: TTTCTGTTTAGAGAAAAGAACTGTGTAGCATGTGCAGGGAACTGTGAAGGAAGACTGAGACCGCCTGGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR GCA 72 bp | GTCCAATGTTGGTTGAACTTTTCAGTATTAACTGCCTaGCCTGAAGAGGAATCTGGAGCAGGAACTCAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VQCWLNFSVLTA*PEEESGAGTQN Trigger: GTTTTGAGTTCCTGCTCCAGATTCCTCTTCAGGGCAGGCAGTTAATACTGAAAAGTTCAACCAACATTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CCA 72 bp | TTCATAAAGGTTCCAGAAGTGAGAGTTGGTCCCAAGTaGTGGCCCAGAATACAAGCAGAGAAAATAAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: FIKVPEVRVGPK*WPRIQAEKIRT Trigger: AGTCCTTATTTTCTCTGCTTGTATTCTGGGCCACCACTTGGGACCAACTCTCACTTCTGGAACCTTTATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR TCA 72 bp | ATGTTGGTTGAACTTTTCAGTATTAACTGCCTGCCCTaGAGAGGAATCTGGAGCAGGAACTCAAAACTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: MLVELFSINCLP*RGIWSRNSKLK Trigger: CTTTAGTTTTGAGTTCCTGCTCCAGATTCCTCTTCAGGGCAGGCAGTTAATACTGAAAAGTTCAACCAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR TCA 72 bp | GAGAAAACACAGCCACCTCAGAGGTTCATTCAACTCTaGGGTGAATTTTCAAGTAAACAAATGAAGTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: EKTQPPQRFIQL*GEFSSKQMKLG Trigger: ACCCAACTTCATTTGTTTACTTGAAAATTCACCTCAGAGTTGAATGAACCTCTGAGGTGGCTGTGTTTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | GCTGGTGGGGTGGCTGCTCTCCTGCCCACCAGAAGGCTGCTCCTCTCTCTGCTGTGCGTCTCATCCACCTaGGGAGCCAGGCTGCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: AGGVAALLPTRRLLLSLLCVSST*GARLLS Trigger: CGACAGCAGCCTGGCTCCTCAGGTGGATGAGACGCA...CAGCAGAGAGAGGAGCAGCCTTCTGGTGGGCAGGAGAGCAGCCACCCCACCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS-3UTR TCA 90 bp | GGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTGCGGGGGGCCACAGTAGGGATTaGCCCCTGAGCCACTACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKGMNRSRAQSRGSRCAGGHSRD*PLSHYA Trigger: AGCGTAGTGGCTCAGGGGTCAATCCCTACTGTGGCC...CCCCGCACACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCC 64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTGCGGGGGGGGCCTCAGGCTGCTaGAAGATGAACTGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKGMNRSRAQSRGSRCAGGASGC*KMNCCC Trigger: GCAACAGCAGTTCATCTTCCAGCAGCCTGAGGCCCC...CCCCGCACACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCC 63% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTGAGCTGCTCAGTAGGTaGAGGAGGCAAGGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPGKGMNRSRAQSRGSRCELLSR*RRQGRA Trigger: AGCCCTCCCTTGCCTCCTCCACCTACTGAGCAGCTC...ACACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | GCTGGTGGGGTGGCTGCTCTCCTGCCCACCAGAAGGCTGCTCCTCTCTCTGCTGCTGAGCCACTACGCTTaGTTTCTTGCTCTCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGGVAALLPTRRLLLSLLLSHYA*FLALQA Trigger: GGCTTGGAGAGCAAGAAAGCAAGCGTAGTGGCTCAG...CAGCAGAGAGAGGAGCAGCCTTCTGGTGGGCAGGAGAGCAGCCACCCCACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | CCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTGCGTTCTGTTTCCGAAGCTaGATGCCCTCTTCCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGKGMNRSRAQSRGSRCAFCFRS*MPSSSL Trigger: GAGGGAGGAAGAGGGCATTCAGCTTCGGAAACAGAA...CGCACACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | GCTGGTGGGGTGGCTGCTCTCCTGCCCACCAGAAGGCTGCTCCTCTCTCTGCTGAGCTTCCTTCCGGATTaGTTCCTTAGAGCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGGVAALLPTRRLLLSLLSFLPD*FLRAAQ Trigger: CTGAGCAGCTCTAAGGAATCAATCCGGAAGGAAGCT...CAGCAGAGAGAGGAGCAGCCTTCTGGTGGGCAGGAGAGCAGCCACCCCACCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | CCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTGCGGTTTCCGAAGCTGAATaGCCTCTTCCTCCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGKGMNRSRAQSRGSRCAVSEAE*PLPPSF Trigger: GAAGGAGGGAGGAAGAGGGCATTCAGCTTCGGAAAC...CGCACACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTGCGGGGGAGGACTCGGCTCTTTaGACAGGAGTTTCCGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: GKGMNRSRAQSRGSRCAGEDSAL*TGVSGI Trigger: AATTCCGGAAACTCCTGTCCAAAGAGCCGAGTCCTC...CCCCGCACACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | CCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTGCGGACCTTTGCAAACTCTaGAGGAGGGTTCTTGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PGKGMNRSRAQSRGSRCADLCKL*RRVLAS Trigger: CGAGGCAAGAACCCTCCTCCAGAGTTTGCAAAGGTC...CGCACACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | CCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTGCGAGTCTGAGTCACTGCTaGAGAGCAGTCGGGACAATA | + |
|
Preference number: 4 (lower is better) Translates to: PGKGMNRSRAQSRGSRCASLSHC*RAVGTI Trigger: TATTGTCCCGACTGCTCTTCAGCAGTGACTCAGACT...CGCACACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGCGCTTGCTCCCTCCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCCAGGCTGCTGGAAGATaGACTGCTGTTGCGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QRALAPSREGDEQVESTVQAAGR*TAVASH Trigger: ATGAGACGCAACAGCAGTTCATCTTCCAGCAGCCTG...GACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGGAGGGAGCAAGCGCCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | CCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTGCGGAGTCTATGACTGCCTaGATCTTCTCATTGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGKGMNRSRAQSRGSRCAESMTA*IFSLGP Trigger: TGGCCCCAATGAGAAGATCCAGGCAGTCATAGACTC...CGCACACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | CCCTCCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTCCAGAGTCTATGACTaGCTGGATCTTCTCATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSREGDEQVESTVSGQQVSRVYD*LDLLIG Trigger: CCCAATGAGAAGATCCAGGCAGTCATAGACTCTGGA...CACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | TGTGCGGGGCTGCTGGTGGGGTGGCTGCTCTCCTGCCCACCAGAAGGCTGCTCCCCATTGAGGGCCACTTaGACAATTTTTGAATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: CAGLLVGWLLSCPPEGCSPLRAT*TIFESI Trigger: AATGGATTCAAAAATTGTGCAAGTGGCCCTCAATGG...GGAGCAGCCTTCTGGTGGGCAGGAGAGCAGCCACCCCACCAGCAGCCCCGCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | CCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTGCGTCCGGAATTTCTGCGTaGTTGCTAACTGCAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGKGMNRSRAQSRGSRCASGISA*LLTASQ Trigger: CTGACTTGCAGTTAGCAACCACGCAGAAATTCCGGA...CGCACACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | CGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGATGGTTCTGTCTGTCCTGCGTCTCATCCACCTaGGGAGCCAGGCTGCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RPLLVSKPNVSLRWFCLSCVSST*GARLLS Trigger: CGACAGCAGCCTGGCTCCTCAGGTGGATGAGACGCA...GGACAGACAGAACCATCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTACAAGGAGAGACCTTTaGAAACTCTGGAGGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPGKGMNRSRAQSRGSRCTRRDL*KLWRRV Trigger: AACCCTCCTCCAGAGTTTGCAAAGGTCTCTCCTTGT...ACACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTTCCGGAATTTCTGCGTaGTTGCTAACTGCAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPGKGMNRSRAQSRGSRCSGISA*LLTASQ Trigger: CTGACTTGCAGTTAGCAACCACGCAGAAATTCCGGA...ACACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | CCCTCCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGCAATTAAGAATGACCTaGGTCTGGATGTCATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSREGDEQVESTVSGQQVQLRMT*VWMSSP Trigger: TGGGGATGACATCCAGACCCAGGTCATTCTTAATTG...CACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| 3UTR CAA 72 bp | GCAAGGAACAGAGAGAGCAGCAGACTCCATCAGGCCTaGCTCCCTTCAGGCTGGGAACAATCAGACCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARNRESSRLHQA*LPSGWEQSDPA Trigger: AGCTGGGTCTGATTGTTCCCAGCCTGAAGGGAGCAAGGCCTGATGGAGTCTGCTGCTCTCTCTGTTCCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | CGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGATGGTTCTGTCTGTCCGAGCTGCTCAGTAGGTaGAGGAGGCAAGGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPLLVSKPNVSLRWFCLSELLSR*RRQGRA Trigger: AGCCCTCCCTTGCCTCCTCCACCTACTGAGCAGCTC...GGACAGACAGAACCATCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | CCATCTGCTCAAGTACCCAAGAGTTACACACGTCAGGGCAGAGGACTGGGATGGCCCTGTTGCCAGCAGTaGTGTTTGAAATGGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSAQVPKSYTRQGRGLGWPCCQQ*CLKWSS Trigger: GCTGGACCATTTCAAACATCACTGCTGGCAACAGGG...CCATCCCAGTCCTCTGCCCTGACGTGTGTAACTCTTGGGTACTTGAGCAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | CCATCTGCTCAAGTACCCAAGAGTTACACACGTCAGGGCAGAGGACTGGGATGGATGACAGCCTGTATTTaGGCCCTGTTGCCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSAQVPKSYTRQGRGLGWMTACI*ALLPAV Trigger: CACTGCTGGCAACAGGGCTCAAATACAGGCTGTCAT...CCATCCCAGTCCTCTGCCCTGACGTGTGTAACTCTTGGGTACTTGAGCAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | TTCCATCTGCTCAAGTACCCAAGAGTTACACACGTCAGGGCAGAGGACTGGGATCTGATGTGGCGTTGGTaGTGGCCCAGGCTGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FHLLKYPRVTHVRAEDWDLMWRW*WPRLLL Trigger: AAGAAGCAGCCTGGGCCATCACCAACGCCACATCAG...ATCCCAGTCCTCTGCCCTGACGTGTGTAACTCTTGGGTACTTGAGCAGATGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGCTGATGTGGCGTTGGTaGTGGCCCAGGCTGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRETHTSPSCLKTQCEPQLMWRW*WPRLLL Trigger: AAGAAGCAGCCTGGGCCATCACCAACGCCACATCAG...CTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGCTCAGGAGTTCCTCCTaGTGTGGCGTTGGTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRETHTSPSCLKTQCEPQLRSSS*CGVGDG Trigger: GCCATCACCAACGCCACATCAGGAGGAACTCCTGAG...CTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | CCCTCCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTACAGGGAAGATGTTTaGATCTATGACAGCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PSREGDEQVESTVSGQQVYREDV*IYDSLY Trigger: ATACAGGCTGTCATAGATGCAAACATCTTCCCTGTA...CACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | CCCTCCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGCCATTGAGGGCCACTTaGACAATTTTTGAATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: PSREGDEQVESTVSGQQVPLRAT*TIFESI Trigger: AATGGATTCAAAAATTGTGCAAGTGGCCCTCAATGG...CACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTATTTCCTGGTTCTCGTaGCTCTGGAGAAACTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: PPGKGMNRSRAQSRGSRCISWFS*LWRNSI Trigger: AATTGAGTTTCTCCAGAGCCACGAGAACCAGGAAAT...ACACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| 3UTR CAA 72 bp | GGTCTTAGGCATAGGGTTAGAGGGAGGGAGGGATCTTaGTCTCATGGGGGCCTCCCCATTAGCCTCTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLRHRVRGREGS*SHGGLPISLYF Trigger: GAAATAGAGGCTAATGGGGAGGCCCCCATGAGACAAAGATCCCTCCCTCCCTCTAACCCTATGCCTAAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CAA 72 bp | CGCCCCGGTTTCTGGCTGCTTTTCTCACAGCCAGCTTaGGTCCTGCACATAGTTCAGGCTTCAGACAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RPGFWLLFSQPA*VLHIVQASDKM Trigger: CATCTTGTCTGAAGCCTGAACTATGTGCAGGACCAAAGCTGGCTGTGAGAAAAGCAGCCAGAAACCGGGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | CTCTTACCACCTCTCAGGGAAGTGCGGCTTGAAGCTGCCACTGCTCAGAATCTAATGACAGCCTGTATTTaGGCCCTGTTGCCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLPPLREVRLEAATAQNLMTACI*ALLPAV Trigger: CACTGCTGGCAACAGGGCTCAAATACAGGCTGTCAT...TAGATTCTGAGCAGTGGCAGCTTCAAGCCGCACTTCCCTGAGAGGTGGTAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | GAAGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGACTCAGGAGTTCCTCCTaGTGTGGCGTTGGTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: EEKPTRPLLVSKPNVSLRLRSSS*CGVGDG Trigger: GCCATCACCAACGCCACATCAGGAGGAACTCCTGAG...TCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGGTAGGGATTGACCCCTaGGCCACTACGCTTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRETHTSPSCLKTQCEPQVGIDP*ATTLAF Trigger: GAAAGCAAGCGTAGTGGCTCAGGGGTCAATCCCTAC...CTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAGAATCTATAGTTCAGTGCACCTAGCCTTGCACACTTCCCCAGCCTGCGTTTCCGAAGCTGAATaGCCTCTTCCTCCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRIYSSVHLALHTSPACVSEAE*PLPPSF Trigger: GAAGGAGGGAGGAAGAGGGCATTCAGCTTCGGAAAC...GCAGGCTGGGGAAGTGTGCAAGGCTAGGTGCACTGAACTATAGATTCTGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | CCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCTCGGGGCAGCAGGTGTGCGCAGGCAGCTTCAAACTaGAATGTACAATTCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PGKGMNRSRAQSRGSRCAQAASN*NVQFSF Trigger: AAATGAGAATTGTACATTGCAGTTTGAAGCTGCCTG...CGCACACCTGCTGCCCCGAGACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGCGCTTGCTCCCTCCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCCCTTGTACGGAACTCTaGTTTCTGAAGGATTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QRALAPSREGDEQVESTVPCTEL*FLKDFN Trigger: ATTGAAATCCTTCAGAAAGCAGAGTTCCGTACAAGG...GACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGGAGGGAGCAAGCGCCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | CAGAGGGCGCTTGCTCCCTCCAGGGAAGGGGATGAACAGGTCGAGAGCACAGTCAATAACTTCATCTATTaGAGGACTCGGCTCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRALAPSREGDEQVESTVNNFIY*RTRLFG Trigger: TCCAAAGAGCCGAGTCCTCCAATAGATGAAGTTATT...GACTGTGCTCTCGACCTGTTCATCCCCTTCCCTGGAGGGAGCAAGCGCCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGAATCTATAGTTCAGTGCACCTAGCCTTGCACACTTCCCCAGCCTGCCCTGGATCTTCTCATTaGGGCCATCAGACAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRIYSSVHLALHTSPACPGSSH*GHQTGR Trigger: CCTACCTGTCTGATGGCCCCAATGAGAAGATCCAGG...GCAGGCTGGGGAAGTGTGCAAGGCTAGGTGCACTGAACTATAGATTCTGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CAA 72 bp | TCCCGGAAGGCACTCGCCAGCGTGGTCCAATGTTGGTaGAACTTTTCAGTATTAACTGCCTGCCCTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRKALASVVQCW*NFSVLTACPEE Trigger: CTCTTCAGGGCAGGCAGTTAATACTGAAAAGTTCAACCAACATTGGACCACGCTGGCGAGTGCCTTCCGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CAA 72 bp | GAGATAATGGAAAACGGGCAGAGGAAAGCAGGACATTaGTGTCTCATGCTGAGGATCTGGCTCCAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EIMENGQRKAGH*CLMLRIWLQGQ Trigger: CTGGCCCTGGAGCCAGATCCTCAGCATGAGACACAAATGTCCTGCTTTCCTCTGCCCGTTTTCCATTATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGTTCTGTTTCCGAAGCTaGATGCCCTCTTCCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRETHTSPSCLKTQCEPQFCFRS*MPSSSL Trigger: GAGGGAGGAAGAGGGCATTCAGCTTCGGAAACAGAA...CTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | CGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGATGGTTCTGTCTGTCCATCTGCCAGCAAGTCTaGGTCACTGCTGAAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLLVSKPNVSLRWFCLSICQQV*VTAEEQ Trigger: CTGCTCTTCAGCAGTGACTCAGACTTGCTGGCAGAT...GGACAGACAGAACCATCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | CTGCAGGCAGACAGAAACACACTTCCTCTGTGTGGGAAGTGTGTCTTTGTACCGCCCTGTTGCCAGCAGTaGTGTTTGAAATGGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQADRNTLPLCGKCVFVPPCCQQ*CLKWSS Trigger: GCTGGACCATTTCAAACATCACTGCTGGCAACAGGG...CGGTACAAAGACACACTTCCCACACAGAGGAAGTGTGTTTCTGTCTGCCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | CCATCTGCTCAAGTACCCAAGAGTTACACACGTCAGGGCAGAGGACTGGGATGGCTTAATGCAGCCCAGTaGTACCAGGTACCTGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSAQVPKSYTRQGRGLGWLNAAQ*YQVPDL Trigger: CAAATCAGGTACCTGGTATCACTGGGCTGCATTAAG...CCATCCCAGTCCTCTGCCCTGACGTGTGTAACTCTTGGGTACTTGAGCAGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | GTCTGCCCAGCTGACACTGTACCCAGCTCCCAGAGCTTGGTTTTAGTGTACTGTGAGGACTCGGCTCTTTaGACAGGAGTTTCCGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: VCPADTVPSSQSLVLVYCEDSAL*TGVSGI Trigger: AATTCCGGAAACTCCTGTCCAAAGAGCCGAGTCCTC...ACAGTACACTAAAACCAAGCTCTGGGAGCTGGGTACAGTGTCAGCTGGGCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | CGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGATGGTTCTGTCTGTCCGACCTTTGCAAACTCTaGAGGAGGGTTCTTGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RPLLVSKPNVSLRWFCLSDLCKL*RRVLAS Trigger: CGAGGCAAGAACCCTCCTCCAGAGTTTGCAAAGGTC...GGACAGACAGAACCATCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGGAGGCAAGGGAGGGCTaGACAATTAAGAATGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRETHTSPSCLKTQCEPQEAREG*TIKNDL Trigger: CAGGTCATTCTTAATTGTTCAGCCCTCCCTTGCCTC...CTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | CTGCAGGCAGACAGAAACACACTTCCTCTGTGTGGGAAGTGTGTCTTTGTACCGAGCTTCCTTCCGGATTaGTTCCTTAGAGCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQADRNTLPLCGKCVFVPSFLPD*FLRAAQ Trigger: CTGAGCAGCTCTAAGGAATCAATCCGGAAGGAAGCT...CGGTACAAAGACACACTTCCCACACAGAGGAAGTGTGTTTCTGTCTGCCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | TTCCATCTGCTCAAGTACCCAAGAGTTACACACGTCAGGGCAGAGGACTGGGATGTGATACCAGGTACCTaGTTTGCTCAGGAGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FHLLKYPRVTHVRAEDWDVIPGT*FAQEFL Trigger: GAGGAACTCCTGAGCAAATCAGGTACCTGGTATCAC...ATCCCAGTCCTCTGCCCTGACGTGTGTAACTCTTGGGTACTTGAGCAGATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | TCTGCAGGCAGACAGAAACACACTTCCTCTGTGTGGGAAGTGTGTCTTTGTACCTGCGTGGTTGCTAACTaGAAGTCAGAGTCGTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SAGRQKHTSSVWEVCLCTCVVAN*KSESSE Trigger: CTCGGACGACTCTGACTTGCAGTTAGCAACCACGCA...GGTACAAAGACACACTTCCCACACAGAGGAAGTGTGTTTCTGTCTGCCTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | TTGATTACCTCAGTCCTCCTTTGTCTACCCCTGGGCTCCTGGGTTAAAGACATGCTGAGCCACTACGCTTaGTTTCTTGCTCTCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LITSVLLCLPLGSWVKDMLSHYA*FLALQA Trigger: GGCTTGGAGAGCAAGAAAGCAAGCGTAGTGGCTCAG...CATGTCTTTAACCCAGGAGCCCAGGGGTAGACAAAGGAGGACTGAGGTAATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | GAAGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGACCTGGATCTTCTCATTaGGGCCATCAGACAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: EEKPTRPLLVSKPNVSLRPGSSH*GHQTGR Trigger: CCTACCTGTCTGATGGCCCCAATGAGAAGATCCAGG...TCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGGAGTCTATGACTGCCTaGATCTTCTCATTGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRETHTSPSCLKTQCEPQESMTA*IFSLGP Trigger: TGGCCCCAATGAGAAGATCCAGGCAGTCATAGACTC...CTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | AAGCTCAGGAGAAAACACAGCCACCTCAGAGGTTCATTCAACTCTGAGGTGAATGGGGCCTCAGGCTGCTaGAAGATGAACTGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLRRKHSHLRGSFNSEVNGASGC*KMNCCC Trigger: GCAACAGCAGTTCATCTTCCAGCAGCCTGAGGCCCC...ATTCACCTCAGAGTTGAATGAACCTCTGAGGTGGCTGTGTTTTCTCCTGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | GTCTGCCCAGCTGACACTGTACCCAGCTCCCAGAGCTTGGTTTTAGTGTACTGTATAATTGTCCTTCCCTaGGCTTGCCATGGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VCPADTVPSSQSLVLVYCIIVLP*ACHGLH Trigger: ATGGAGACCATGGCAAGCCCAGGGAAGGACAATTAT...ACAGTACACTAAAACCAAGCTCTGGGAGCTGGGTACAGTGTCAGCTGGGCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGACAATTTTGGTCTGCTaGGACGTTCCAGAGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GRETHTSPSCLKTQCEPQTILVC*DVPEAM Trigger: CATTGCCTCTGGAACGTCTCAGCAGACCAAAATTGT...CTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | AGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGATGAGTCTGAGTCACTGCTaGAGAGCAGTCGGGACAATA | + |
|
Preference number: 4 (lower is better) Translates to: RETHTSPSCLKTQCEPQMSLSHC*RAVGTI Trigger: TATTGTCCCGACTGCTCTTCAGCAGTGACTCAGACT...CATCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | ACCTCTGGAATATTCCATCTGCTCAAGTACCCAAGAGTTACACACGTCAGGGCAATCTGCCAGCAAGTCTaGGTCACTGCTGAAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSGIFHLLKYPRVTHVRAICQQV*VTAEEQ Trigger: CTGCTCTTCAGCAGTGACTCAGACTTGCTGGCAGAT...TGCCCTGACGTGTGTAACTCTTGGGTACTTGAGCAGATGGAATATTCCAGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | TCTGCAGGCAGACAGAAACACACTTCCTCTGTGTGGGAAGTGTGTCTTTGTACCGTGATACCAGGTACCTaGTTTGCTCAGGAGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SAGRQKHTSSVWEVCLCTVIPGT*FAQEFL Trigger: GAGGAACTCCTGAGCAAATCAGGTACCTGGTATCAC...GGTACAAAGACACACTTCCCACACAGAGGAAGTGTGTTTCTGTCTGCCTGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | CTCTTACCACCTCTCAGGGAAGTGCGGCTTGAAGCTGCCACTGCTCAGAATCTATGTTCTCTAGTCCATTaGGGGCCACTTGCACAATTT | + |
|
Preference number: 4 (lower is better) Translates to: LLPPLREVRLEAATAQNLCSLVH*GPLAQF Trigger: AAATTGTGCAAGTGGCCCTCAATGGACTAGAGAACA...TAGATTCTGAGCAGTGGCAGCTTCAAGCCGCACTTCCCTGAGAGGTGGTAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | AAGCTCAGGAGAAAACACAGCCACCTCAGAGGTTCATTCAACTCTGAGGTGAATGTAGGGATTGACCCCTaGGCCACTACGCTTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLRRKHSHLRGSFNSEVNVGIDP*ATTLAF Trigger: GAAAGCAAGCGTAGTGGCTCAGGGGTCAATCCCTAC...ATTCACCTCAGAGTTGAATGAACCTCTGAGGTGGCTGTGTTTTCTCCTGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | ACCTCTGGAATATTCCATCTGCTCAAGTACCCAAGAGTTACACACGTCAGGGCATGCGTGGTTGCTAACTaGAAGTCAGAGTCGTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSGIFHLLKYPRVTHVRACVVAN*KSESSE Trigger: CTCGGACGACTCTGACTTGCAGTTAGCAACCACGCA...TGCCCTGACGTGTGTAACTCTTGGGTACTTGAGCAGATGGAATATTCCAGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | CGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGATGGTTCTGTCTGTCCCTACGCTTGCTTTCTTaGTCTCCAAGCCGAAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RPLLVSKPNVSLRWFCLSLRLLS*SPSRRM Trigger: CATTCTTCGGCTTGGAGAGCAAGAAAGCAAGCGTAG...GGACAGACAGAACCATCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| 3UTR CAA 72 bp | GTGGGTAACAGTGAGTTAGAGAAGGCAGGATGCTTTTaGCTTGGGAGCAAGGAACAGAGAGAGCAGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VGNSELEKAGCF*LGSKEQREQQT Trigger: AGTCTGCTGCTCTCTCTGTTCCTTGCTCCCAAGCAAAAAGCATCCTGCCTTCTCTAACTCACTGTTACCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | TTGATTACCTCAGTCCTCCTTTGTCTACCCCTGGGCTCCTGGGTTAAAGACATGACAATTTTGGTCTGCTaGGACGTTCCAGAGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LITSVLLCLPLGSWVKDMTILVC*DVPEAM Trigger: CATTGCCTCTGGAACGTCTCAGCAGACCAAAATTGT...CATGTCTTTAACCCAGGAGCCCAGGGGTAGACAAAGGAGGACTGAGGTAATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | TTGATTACCTCAGTCCTCCTTTGTCTACCCCTGGGCTCCTGGGTTAAAGACATGCAGCTCCTGCTTCAATaGCAATTTTGGTCTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LITSVLLCLPLGSWVKDMQLLLQ*QFWSAE Trigger: CTCAGCAGACCAAAATTGTCATTGAAGCAGGAGCTG...CATGTCTTTAACCCAGGAGCCCAGGGGTAGACAAAGGAGGACTGAGGTAATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | AGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGATGAGACTCCAGAGTCTATaGCTGCCTGGATCTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RETHTSPSCLKTQCEPQMRLQSL*LPGSSH Trigger: ATGAGAAGATCCAGGCAGTCATAGACTCTGGAGTCT...CATCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | ACCTCTGGAATATTCCATCTGCTCAAGTACCCAAGAGTTACACACGTCAGGGCAGAGGCAAGGGAGGGCTaGACAATTAAGAATGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSGIFHLLKYPRVTHVRAEAREG*TIKNDL Trigger: CAGGTCATTCTTAATTGTTCAGCCCTCCCTTGCCTC...TGCCCTGACGTGTGTAACTCTTGGGTACTTGAGCAGATGGAATATTCCAGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | GGGCAGCAGAAAGGGGAAGTGGTAGATACAAGGTCCCGGGTAAAGGGGACACCACAGGCAGCTTCAAACTaGAATGTACAATTCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GQQKGEVVDTRSRVKGTPQAASN*NVQFSF Trigger: AAATGAGAATTGTACATTGCAGTTTGAAGCTGCCTG...TGGTGTCCCCTTTACCCGGGACCTTGTATCTACCACTTCCCCTTTCTGCTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | CAGCCCTGTGAGCAGAAACTTGTTCGTCTTTCTGGTCTTCCTCACAGTATCCCAACAAGGAGAGACCTTTaGAAACTCTGGAGGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QPCEQKLVRLSGLPHSIPTRRDL*KLWRRV Trigger: AACCCTCCTCCAGAGTTTGCAAAGGTCTCTCCTTGT...TGGGATACTGTGAGGAAGACCAGAAAGACGAACAAGTTTCTGCTCACAGGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGATCCAGAGTCTATGACTaGCTGGATCTTCTCATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EEKPTRPLLVSKPNVSLRSRVYD*LDLLIG Trigger: CCCAATGAGAAGATCCAGGCAGTCATAGACTCTGGA...TCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | TTGATTACCTCAGTCCTCCTTTGTCTACCCCTGGGCTCCTGGGTTAAAGACATGACCAGGTACCTGATTTaGTCAGGAGTTCCTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LITSVLLCLPLGSWVKDMTRYLI*SGVPPD Trigger: ATCAGGAGGAACTCCTGAGCAAATCAGGTACCTGGT...CATGTCTTTAACCCAGGAGCCCAGGGGTAGACAAAGGAGGACTGAGGTAATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | CTCTTACCACCTCTCAGGGAAGTGCGGCTTGAAGCTGCCACTGCTCAGAATCTATGGTTCTCGTGGCTCTaGAGAAACTCAATTTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPPLREVRLEAATAQNLWFSWL*RNSILS Trigger: GGATAAAATTGAGTTTCTCCAGAGCCACGAGAACCA...TAGATTCTGAGCAGTGGCAGCTTCAAGCCGCACTTCCCTGAGAGGTGGTAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CAA 72 bp | ACTTCCTCTGTGTGGGAAGTGTGTCTTTGTACCGGCTaGGTTTCAAAGAAAGAAACTCCACGCAGAAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TSSVWEVCLCTG*VSKKETPRRST Trigger: GGTGCTTCTGCGTGGAGTTTCTTTCTTTGAAACCAAGCCGGTACAAAGACACACTTCCCACACAGAGGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | AGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGATGTGTTCTCTAGTCCATTaGGGGCCACTTGCACAATTT | + |
|
Preference number: 4 (lower is better) Translates to: RETHTSPSCLKTQCEPQMCSLVH*GPLAQF Trigger: AAATTGTGCAAGTGGCCCTCAATGGACTAGAGAACA...CATCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGAATGGGGACAGCTCCTaGTTCAATGACAATTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRETHTSPSCLKTQCEPQNGDSS*FNDNFG Trigger: ACCAAAATTGTCATTGAAGCAGGAGCTGTCCCCATT...CTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | CTCTTACCACCTCTCAGGGAAGTGCGGCTTGAAGCTGCCACTGCTCAGAATCTACCTTGTACGGAACTCTaGTTTCTGAAGGATTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLPPLREVRLEAATAQNLPCTEL*FLKDFN Trigger: ATTGAAATCCTTCAGAAAGCAGAGTTCCGTACAAGG...TAGATTCTGAGCAGTGGCAGCTTCAAGCCGCACTTCCCTGAGAGGTGGTAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGTGCAAATTGATTACCTCAGTCCTCCTTTGTCTACCCCTGGGCTCCTGACCAGGTACCTGATTTaGTCAGGAGTTCCTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LKVQIDYLSPPLSTPGLLTRYLI*SGVPPD Trigger: ATCAGGAGGAACTCCTGAGCAAATCAGGTACCTGGT...CAGGAGCCCAGGGGTAGACAAAGGAGGACTGAGGTAATCAATTTGCACCTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | GCTTGGTTTCAAAGAAAGAAACTCCACGCAGAAGCACCGTCTTTTCCTCTCCCTCTACGCTTGCTTTCTTaGTCTCCAAGCCGAAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: AWFQRKKLHAEAPSFPLPLRLLS*SPSRRM Trigger: CATTCTTCGGCTTGGAGAGCAAGAAAGCAAGCGTAG...AGGGAGAGGAAAAGACGGTGCTTCTGCGTGGAGTTTCTTTCTTTGAAACCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | CGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGATGGTTCTGTCTGTCCTGGTTCTCGTGGCTCTaGAGAAACTCAATTTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: RPLLVSKPNVSLRWFCLSWFSWL*RNSILS Trigger: GGATAAAATTGAGTTTCTCCAGAGCCACGAGAACCA...GGACAGACAGAACCATCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | ACCTCTGGAATATTCCATCTGCTCAAGTACCCAAGAGTTACACACGTCAGGGCAAGATGTTTGCATCTATaGCAGCCTGTATTTGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSGIFHLLKYPRVTHVRARCLHL*QPVFEP Trigger: GGGCTCAAATACAGGCTGTCATAGATGCAAACATCT...TGCCCTGACGTGTGTAACTCTTGGGTACTTGAGCAGATGGAATATTCCAGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | ACCTCTGGAATATTCCATCTGCTCAAGTACCCAAGAGTTACACACGTCAGGGCAAGTTTCCGGAATTTCTaGGTGGTTGCTAACTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSGIFHLLKYPRVTHVRASFRNF*VVANCK Trigger: CTTGCAGTTAGCAACCACGCAGAAATTCCGGAAACT...TGCCCTGACGTGTGTAACTCTTGGGTACTTGAGCAGATGGAATATTCCAGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | AGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGATGAATGGGGACAGCTCCTaGTTCAATGACAATTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RETHTSPSCLKTQCEPQMNGDSS*FNDNFG Trigger: ACCAAAATTGTCATTGAAGCAGGAGCTGTCCCCATT...CATCTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | ACCTCTGGAATATTCCATCTGCTCAAGTACCCAAGAGTTACACACGTCAGGGCACAATTAAGAATGACCTaGGTCTGGATGTCATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSGIFHLLKYPRVTHVRAQLRMT*VWMSSP Trigger: TGGGGATGACATCCAGACCCAGGTCATTCTTAATTG...TGCCCTGACGTGTGTAACTCTTGGGTACTTGAGCAGATGGAATATTCCAGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | TTGGTTTCAAAGAAAGAAACTCCACGCAGAAGCACCGTCTTTTCCTCTCCCTCAAGATGTTTGCATCTATaGCAGCCTGTATTTGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSKKETPRRSTVFSSPSRCLHL*QPVFEP Trigger: GGGCTCAAATACAGGCTGTCATAGATGCAAACATCT...TGAGGGAGAGGAAAAGACGGTGCTTCTGCGTGGAGTTTCTTTCTTTGAAACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | TCAGACAAGATGCTCTCTCAGAAGGAAAACAAGTTTTCACTCAGATTTGTTGGCCAGGCTGCTGGAAGATaGACTGCTGTTGCGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SDKMLSQKENKFSLRFVGQAAGR*TAVASH Trigger: ATGAGACGCAACAGCAGTTCATCTTCCAGCAGCCTG...GCCAACAAATCTGAGTGAAAACTTGTTTTCCTTCTGAGAGAGCATCTTGTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CAA 72 bp | AAAATAAGGACTGAGTTCAGCCCTGTGAGCAGAAACTaGTTCGTCTTTCTGGTCTTCCTCACAGTATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KIRTEFSPVSRN*FVFLVFLTVSH Trigger: GTGGGATACTGTGAGGAAGACCAGAAAGACGAACAAGTTTCTGCTCACAGGGCTGAACTCAGTCCTTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CAA 72 bp | ACAGAAACACACTTCCTCTGTGTGGGAAGTGTGTCTTaGTACCGGCTTGGTTTCAAAGAAAGAAACTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: TETHFLCVGSVS*YRLGFKERNST Trigger: CGTGGAGTTTCTTTCTTTGAAACCAAGCCGGTACAAAGACACACTTCCCACACAGAGGAAGTGTGTTTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR TCA 90 bp | CAGTTCCCTGCACATGCTACACAGTTCTTTTCTCTAAACAGAAACCTTAACGTCCTTAATGCAGCCCAGTaGTACCAGGTACCTGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: QFPAHATQFFSLNRNLNVLNAAQ*YQVPDL Trigger: CAAATCAGGTACCTGGTATCACTGGGCTGCATTAAG...GACGTTAAGGTTTCTGTTTAGAGAAAAGAACTGTGTAGCATGTGCAGGGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CAA 72 bp | TGCTCTCTCAGAAGGAAAACAAGTTTTCACTCAGATTaGTTGGCGTTGACCTTAGCTTCTTCCCTTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSLRRKTSFHSD*LALTLASSLAV Trigger: CACAGCAAGGGAAGAAGCTAAGGTCAACGCCAACAAATCTGAGTGAAAACTTGTTTTCCTTCTGAGAGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR GCA 90 bp | AAGCTCAGGAGAAAACACAGCCACCTCAGAGGTTCATTCAACTCTGAGGTGAATTACAGGGAAGATGTTTaGATCTATGACAGCCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KLRRKHSHLRGSFNSEVNYREDV*IYDSLY Trigger: ATACAGGCTGTCATAGATGCAAACATCTTCCCTGTA...ATTCACCTCAGAGTTGAATGAACCTCTGAGGTGGCTGTGTTTTCTCCTGAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| 3UTR CAA 72 bp | TCTCTCAGAAGGAAAACAAGTTTTCACTCAGATTTGTaGGCGTTGACCTTAGCTTCTTCCCTTGCTGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLRRKTSFHSDL*ALTLASSLAVH Trigger: ATGCACAGCAAGGGAAGAAGCTAAGGTCAACGCCAACAAATCTGAGTGAAAACTTGTTTTCCTTCTGAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR CCA 90 bp | AAGCATACAAGATTAATATGGGTCAGAGCAAGAACACTTTGTTTGGGACTTCTCATTTCCTGGTTCTCGTaGCTCTGGAGAAACTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: KHTRLIWVRARTLCLGLLISWFS*LWRNSI Trigger: AATTGAGTTTCTCCAGAGCCACGAGAACCAGGAAAT...GAGAAGTCCCAAACAAAGTGTTCTTGCTCTGACCCATATTAATCTTGTATGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
||
| CDS-3UTR CAA 90 bp | TGTGCGGGGCTGCTGGTGGGGTGGCTGCTCTCCTGCCCACCAGAAGGCTGCTCCACTACGCTTGCTTTCTaGCTCTCCAAGCCGAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: CAGLLVGWLLSCPPEGCSTTLAF*LSKPKN Trigger: ATTCTTCGGCTTGGAGAGCAAGAAAGCAAGCGTAGT...GGAGCAGCCTTCTGGTGGGCAGGAGAGCAGCCACCCCACCAGCAGCCCCGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CAA 90 bp | GCTGGTGGGGTGGCTGCTCTCCTGCCCACCAGAAGGCTGCTCCTCTCTCTGCTGTATGACAGCCTGTATTaGAGCCCTGTTGCCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: AGGVAALLPTRRLLLSLLYDSLY*SPVASS Trigger: ACTGCTGGCAACAGGGCTCAAATACAGGCTGTCATA...CAGCAGAGAGAGGAGCAGCCTTCTGGTGGGCAGGAGAGCAGCCACCCCACCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CAA 90 bp | AAGGTGCAAATTGATTACCTCAGTCCTCCTTTGTCTACCCCTGGGCTCCTGGGTTGCCTCGGCAGAGGTTaGACAGGGCCCAGACTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KVQIDYLSPPLSTPGLLGCLGRG*TGPRLH Trigger: ATGCAGTCTGGGCCCTGTCAAACCTCTGCCGAGGCA...ACCCAGGAGCCCAGGGGTAGACAAAGGAGGACTGAGGTAATCAATTTGCACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGTGCAAATTGATTACCTCAGTCCTCCTTTGTCTACCCCTGGGCTCCTGCCTCCTGATGTGGCGTaGGTGATGGCCCAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LKVQIDYLSPPLSTPGLLPPDVA*VMAQAA Trigger: AGCAGCCTGGGCCATCACCAACGCCACATCAGGAGG...CAGGAGCCCAGGGGTAGACAAAGGAGGACTGAGGTAATCAATTTGCACCTTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
||
| CDS TCA 90 bp | CAAGCCATAGGCTTCCTCGATGAGGCCACAGTAGGGATTGACCCCTaGGCCACTACGCTTGCTTTCTTGCTCTCCAAGCCGAAGAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: QAIGFLDEATVGIDP*ATTLAFLLSKPKNV Trigger: AACATTCTTCGGCTTGGAGAGCAAGAAAGCAAGCGTAGTGGCTCAGGGGTCAATCCCTACTGTGGCCTCATCGAGGAAGCCTATGGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS-3UTR CAA 90 bp | CCTAGCCTTGCACACTTCCCCAGCCTGCTAGGGAAGCTTGTCACTAACTATCCTGAAGATGAACTGCTGTaGCGTCTCATCCACCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: PSLAHFPSLLGKLVTNYPEDELL*RLIHLR Trigger: CCTCAGGTGGATGAGACGCAACAGCAGTTCATCTTC...AGGATAGTTAGTGACAAGCTTCCCTAGCAGGCTGGGGAAGTGTGCAAGGCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| CDS CCA 90 bp | CAGCAAGCTTCCTTCCGGATTGATTCCTTAGAGCTGCTCAGTAGGTaGAGGAGGCAAGGGAGGGCTGAACAATTAAGAATGACCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: QQASFRIDSLELLSR*RRQGRAEQLRMTWV Trigger: GACCCAGGTCATTCTTAATTGTTCAGCCCTCCCTTGCCTCCTCCACCTACTGAGCAGCTCTAAGGAATCAATCCGGAAGGAAGCTTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS-3UTR CAA 90 bp | ATTTACTTCATAAAGGTTCCAGAAGTGAGAGTTGGTCCCAAGTGGTGGCCCAGATGCCTCGGCAGAGGTTaGACAGGGCCCAGACTGCAT | + |
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Preference number: 5 (lower is better) Translates to: IYFIKVPEVRVGPKWWPRCLGRG*TGPRLH Trigger: ATGCAGTCTGGGCCCTGTCAAACCTCTGCCGAGGCA...TCTGGGCCACCACTTGGGACCAACTCTCACTTCTGGAACCTTTATGAAGTAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| CDS-3UTR CAA 90 bp | GGAAGAGAAACCCACACGTCCCCTTCTTGTCTCAAAACCCAATGTGAGCCTCAGGAAGATGAACTGCTGTaGCGTCTCATCCACCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GRETHTSPSCLKTQCEPQEDELL*RLIHLR Trigger: CCTCAGGTGGATGAGACGCAACAGCAGTTCATCTTC...CTGAGGCTCACATTGGGTTTTGAGACAAGAAGGGGACGTGTGGGTTTCTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS GCA 90 bp | GGCTCTTTGGACAGGAGTTTCCGGAATTTCTGCGTGGTTGCTAACTaGAAGTCAGAGTCGTCCGAGAAGAGCATCTCTACCATCTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: GSLDRSFRNFCVVAN*KSESSEKSISTISL Trigger: GAGAGAGATGGTAGAGATGCTCTTCTCGGACGACTCTGACTTGCAGTTAGCAACCACGCAGAAATTCCGGAAACTCCTGTCCAAAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS GCA 90 bp | TCTATTGGAGGACTCGGCTCTTTGGACAGGAGTTTCCGGAATTTCTaGGTGGTTGCTAACTGCAAGTCAGAGTCGTCCGAGAAGAGCATC | + |
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Preference number: 5 (lower is better) Translates to: SIGGLGSLDRSFRNF*VVANCKSESSEKSI Trigger: GATGCTCTTCTCGGACGACTCTGACTTGCAGTTAGCAACCACGCAGAAATTCCGGAAACTCCTGTCCAAAGAGCCGAGTCCTCCAATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS CCA 90 bp | TTGGAGGACTCGGCTCTTTGGACAGGAGTTTCCGGAATTTCTGCGTaGTTGCTAACTGCAAGTCAGAGTCGTCCGAGAAGAGCATCTCTA | + |
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Preference number: 5 (lower is better) Translates to: LEDSALWTGVSGISA*LLTASQSRPRRASL Trigger: TAGAGATGCTCTTCTCGGACGACTCTGACTTGCAGTTAGCAACCACGCAGAAATTCCGGAAACTCCTGTCCAAAGAGCCGAGTCCTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS-3UTR CAA 90 bp | CCATCTGCTCAAGTACCCAAGAGTTACACACGTCAGGGCAGAGGACTGGGATGGATGTTCTCTAGTCCATaGAGGGCCACTTGCACAATT | + |
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Preference number: 5 (lower is better) Translates to: PSAQVPKSYTRQGRGLGWMFSSP*RATCTI Trigger: AATTGTGCAAGTGGCCCTCAATGGACTAGAGAACAT...CCATCCCAGTCCTCTGCCCTGACGTGTGTAACTCTTGGGTACTTGAGCAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS-3UTR CAA 90 bp | CAGGCTGGGAACAATCAGACCCAGCTGATTTACTTCATAAAGGTTCCAGAAGTGTATGACAGCCTGTATTaGAGCCCTGTTGCCAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: QAGNNQTQLIYFIKVPEVYDSLY*SPVASS Trigger: ACTGCTGGCAACAGGGCTCAAATACAGGCTGTCATA...CACTTCTGGAACCTTTATGAAGTAAATCAGCTGGGTCTGATTGTTCCCAGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| CDS TCA 90 bp | TTTCTCCGTTTAAAAAGTTGTTGTTCCCGCTTCTGTTTCCGAAGCTaGATGCCCTCTTCCTCCCTCCTTCGTCTCATTTCCTCAGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: FLRLKSCCSRFCFRS*MPSSSLLRLISSGF Trigger: AAACCCTGAGGAAATGAGACGAAGGAGGGAGGAAGAGGGCATTCAGCTTCGGAAACAGAAGCGGGAACAACAACTTTTTAAACGGAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 ENSMUST00000126010.2 |
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| CDS-3UTR CAA 90 bp | ATTTACTTCATAAAGGTTCCAGAAGTGAGAGTTGGTCCCAAGTGGTGGCCCAGAATGTTCTCTAGTCCATaGAGGGCCACTTGCACAATT | + |
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Preference number: 5 (lower is better) Translates to: IYFIKVPEVRVGPKWWPRMFSSP*RATCTI Trigger: AATTGTGCAAGTGGCCCTCAATGGACTAGAGAACAT...TCTGGGCCACCACTTGGGACCAACTCTCACTTCTGGAACCTTTATGAAGTAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| CDS-3UTR CAA 90 bp | CAGTTCCCTGCACATGCTACACAGTTCTTTTCTCTAAACAGAAACCTTAACGTCACTACGCTTGCTTTCTaGCTCTCCAAGCCGAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: QFPAHATQFFSLNRNLNVTTLAF*LSKPKN Trigger: ATTCTTCGGCTTGGAGAGCAAGAAAGCAAGCGTAGT...GACGTTAAGGTTTCTGTTTAGAGAAAAGAACTGTGTAGCATGTGCAGGGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102590.11 |
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| CDS TCA 72 bp | GGCTTCCTCGATGAGGCCACAGTAGGGATTGACCCCTaGGCCACTACGCTTGCTTTCTTGCTCTCCAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: GFLDEATVGIDP*ATTLAFLLSKP Trigger: CGGCTTGGAGAGCAAGAAAGCAAGCGTAGTGGCTCAGGGGTCAATCCCTACTGTGGCCTCATCGAGGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS TCA 72 bp | TGCTGGAAGATGAACTGCTGTTGCGTCTCATCCACCTaGGGAGCCAGGCTGCTGTCGTCATCCTCTACACCA | + |
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Preference number: 6 (lower is better) Translates to: CWKMNCCCVSST*GARLLSSSSTP Trigger: TGGTGTAGAGGATGACGACAGCAGCCTGGCTCCTCAGGTGGATGAGACGCAACAGCAGTTCATCTTCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS GCA 72 bp | GGACTCGGCTCTTTGGACAGGAGTTTCCGGAATTTCTaGGTGGTTGCTAACTGCAAGTCAGAGTCGTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: GLGSLDRSFRNF*VVANCKSESSE Trigger: CTCGGACGACTCTGACTTGCAGTTAGCAACCACGCAGAAATTCCGGAAACTCCTGTCCAAAGAGCCGAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS CAA 90 bp | GAGGACTCGGCTCTTTGGACAGGAGTTTCCGGAATTTCTGCGTGGTaGCTAACTGCAAGTCAGAGTCGTCCGAGAAGAGCATCTCTACCA | + |
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Preference number: 6 (lower is better) Translates to: EDSALWTGVSGISAW*LTASQSRPRRASLP Trigger: TGGTAGAGATGCTCTTCTCGGACGACTCTGACTTGCAGTTAGCAACCACGCAGAAATTCCGGAAACTCCTGTCCAAAGAGCCGAGTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS GCA 72 bp | GACAGGAGTTTCCGGAATTTCTGCGTGGTTGCTAACTaGAAGTCAGAGTCGTCCGAGAAGAGCATCTCTACC | + |
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Preference number: 6 (lower is better) Translates to: DRSFRNFCVVAN*KSESSEKSIST Trigger: GGTAGAGATGCTCTTCTCGGACGACTCTGACTTGCAGTTAGCAACCACGCAGAAATTCCGGAAACTCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS CCA 72 bp | TCGGCTCTTTGGACAGGAGTTTCCGGAATTTCTGCGTaGTTGCTAACTGCAAGTCAGAGTCGTCCGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SALWTGVSGISA*LLTASQSRPRR Trigger: TCTTCTCGGACGACTCTGACTTGCAGTTAGCAACCACGCAGAAATTCCGGAAACTCCTGTCCAAAGAGCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS CAA 72 bp | GCTCTTTGGACAGGAGTTTCCGGAATTTCTGCGTGGTaGCTAACTGCAAGTCAGAGTCGTCCGAGAAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: ALWTGVSGISAW*LTASQSRPRRA Trigger: TGCTCTTCTCGGACGACTCTGACTTGCAGTTAGCAACCACGCAGAAATTCCGGAAACTCCTGTCCAAAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS GCA 72 bp | AAAGTTGTTGTTCCCGCTTCTGTTTCCGAAGCTGAATaGCCTCTTCCTCCCTCCTTCGTCTCATTTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: KVVVPASVSEAE*PLPPSFVSFPQ Trigger: CTGAGGAAATGAGACGAAGGAGGGAGGAAGAGGGCATTCAGCTTCGGAAACAGAAGCGGGAACAACAACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 ENSMUST00000126010.2 |
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| CDS CCA 72 bp | TCCTTCCGGATTGATTCCTTAGAGCTGCTCAGTAGGTaGAGGAGGCAAGGGAGGGCTGAACAATTAAGAATG | + |
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Preference number: 6 (lower is better) Translates to: SFRIDSLELLSR*RRQGRAEQLRM Trigger: CATTCTTAATTGTTCAGCCCTCCCTTGCCTCCTCCACCTACTGAGCAGCTCTAAGGAATCAATCCGGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS TCA 72 bp | TTAAAAAGTTGTTGTTCCCGCTTCTGTTTCCGAAGCTaGATGCCCTCTTCCTCCCTCCTTCGTCTCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: LKSCCSRFCFRS*MPSSSLLRLIS Trigger: GGAAATGAGACGAAGGAGGGAGGAAGAGGGCATTCAGCTTCGGAAACAGAAGCGGGAACAACAACTTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 ENSMUST00000126010.2 |
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| CDS TCA 72 bp | CTTGCTCTCCAAGCCGAAGAATGTTCTCTAGTCCATTaGGGGCCACTTGCACAATTTTTGAATCCATTACAG | + |
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Preference number: 6 (lower is better) Translates to: LALQAEECSLVH*GPLAQFLNPLQ Trigger: CTGTAATGGATTCAAAAATTGTGCAAGTGGCCCTCAATGGACTAGAGAACATTCTTCGGCTTGGAGAGCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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| CDS CAA 72 bp | TCTTGCTCTCCAAGCCGAAGAATGTTCTCTAGTCCATaGAGGGCCACTTGCACAATTTTTGAATCCATTACA | + |
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Preference number: 6 (lower is better) Translates to: SCSPSRRMFSSP*RATCTIFESIT Trigger: TGTAATGGATTCAAAAATTGTGCAAGTGGCCCTCAATGGACTAGAGAACATTCTTCGGCTTGGAGAGCAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003828.11 ENSMUST00000102590.11 |
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