Pregenerated sensors for KPNA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027782Ensembl transcript IDs: ENSMUST00000029353.9
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTCAGAGGGCAACCTTCAAGAATCAGTTCTCTCCTTCTACCATGTaGATTCCAGGGATCCAACTTGCATCAGGCTTGTTGTTGGATAAA | + |
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Preference number: 1 (lower is better) Translates to: GQRATFKNQFSPSTM*IPGIQLASGLLLDK Trigger: TTTATCCAACAACAAGCCTGATGCAAGTTGGATCCCTGGAATCCACATGGTAGAAGGAGAGAACTGATTCTTGAAGGTTGCCCTCTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR TCA 90 bp | ACACACCAGAAGAGGGCATCAGATCTCATTACAGATAACCATCTGTaGGCCATCATGTGGTTGCTAGGATTTGAACTCAGGACCTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: THQKRASDLITDNHL*AIMWLLGFELRTFG Trigger: TCCAAAGGTCCTGAGTTCAAATCCTAGCAACCACATGATGGCTCACAGATGGTTATCTGTAATGAGATCTGATGCCCTCTTCTGGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR TCA 90 bp | TTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTTTCCATTaGGCCATCTCACCAGCCCTACAGCATCATTTATTAAGAGTTAAT | + |
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Preference number: 1 (lower is better) Translates to: FELRTFGRAVSALFH*AISPALQHHLLRVN Trigger: ATTAACTCTTAATAAATGATGCTGTAGGGCTGGTGAGATGGCTCAATGGAAAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR TCA 90 bp | TGGTCTCACAAAGCAGAAGCTATTAAAGTCAGAAAAAGAAGAGCTTaGCACAGACATCCAGAGCAAACCTTTTATTATTTAAAGGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: WSHKAEAIKVRKRRA*HRHPEQTFYYLKGL Trigger: CAGGCCCTTTAAATAATAAAAGGTTTGCTCTGGATGTCTGTGTCAAGCTCTTCTTTTTCTGACTTTAATAGCTTCTGCTTTGTGAGACCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR CCA 90 bp | AGAATGCATCAAATGTGTAAGGACTTTGCAAGTATAATGAAAGTTTaGGCTTTAATCGAAAGAGAAATTACCCCGGAAACGAGTGACCTG | + |
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Preference number: 1 (lower is better) Translates to: RMHQMCKDFASIMKV*ALIEREITPETSDL Trigger: CAGGTCACTCGTTTCCGGGGTAATTTCTCTTTCGATTAAAGCCCAAACTTTCATTATACTTGCAAAGTCCTTACACATTTGATGCATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR CCA 90 bp | CCTGACCCTGGATCCAACTCGAACCTCTTTAAAATTTACTCTGTATaGGGTATTCAATTACTACAAGAAAGTCAAAATCAGTCCAACAGA | + |
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Preference number: 1 (lower is better) Translates to: PDPGSNSNLFKIYSV*GIQLLQESQNQSNR Trigger: TCTGTTGGACTGATTTTGACTTTCTTGTAGTAATTGAATACCCCATACAGAGTAAATTTTAAAGAGGTTCGAGTTGGATCCAGGGTCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR GCA 90 bp | GAGGAAACATTGGGTAAAATTAGCAACTATAGTCAAGAGTTCATTTaGTACTGCTGTTGTATGTCTCCCAAGCCTTTACACATTGAGTTA | + |
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Preference number: 1 (lower is better) Translates to: EETLGKISNYSQEFI*YCCCMSPKPLHIEL Trigger: TAACTCAATGTGTAAAGGCTTGGGAGACATACAACAGCAGTAGCAAATGAACTCTTGACTATAGTTGCTAATTTTACCCAATGTTTCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR TCA 90 bp | CCCTTAATACTGTGGGAGAGGTTATCTAGAACATCCCATCAATTATaGGTCAGATTATGGAAAGTTTCCACATTTCTTTGGAAAAAGACA | + |
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Preference number: 1 (lower is better) Translates to: PLILWERLSRTSHQL*VRLWKVSTFLWKKT Trigger: TGTCTTTTTCCAAAGAAATGTGGAAACTTTCCATAATCTGACTCATAATTGATGGGATGTTCTAGATAACCTCTCCCACAGTATTAAGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR CCA 90 bp | TACATGCTCAGCTACCTACCAGGATTCTTTATATATATATATACATaGATAACTATTCTGTATAGCTGGCCTACTACAAGTGCACTGATT | + |
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Preference number: 1 (lower is better) Translates to: YMLSYLPGFFIYIYT*ITILYSWPTTSALI Trigger: AATCAGTGCACTTGTAGTAGGCCAGCTATACAGAATAGTTATCCATGTATATATATATATAAAGAATCCTGGTAGGTAGCTGAGCATGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGACCTGACCTTACCAAGCCAGCCCTTCAAAAGAGGGCACAGGCTTCCCCTGCTTGACTGGAGAAAGTaGAGGAAGGTCAAAGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SDLTLPSQPFKRGHRLPLLDWRK*RKVKAL Trigger: CAAGGCTTTGACCTTCCTTCACTTTCTCCAGTCAAG...CAGGGGAAGCCTGTGCCCTCTTTTGAAGGGCTGGCTTGGTAAGGTCAGGTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGAATCAGTTCTCTCCTTCTACCATGTGGATTCCAGGGATCCAACTTGCATCGGAACCACAAGGGACTaGCTGCTGTGGCCCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: QESVLSFYHVDSRDPTCIGTTRD*LLWPWW Trigger: CCACCAGGGCCACAGCAGTCAGTCCCTTGTGGTTCC...GATGCAAGTTGGATCCCTGGAATCCACATGGTAGAAGGAGAGAACTGATTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR TCA 90 bp | AAGAATCAGTTCTCTCCTTCTACCATGTGGATTCCAGGGATCCAACTTGCATCAGGCACAGGCTTCCCCTaGGATCAGAGAGGCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: KNQFSPSTMWIPGIQLASGTGFP*DQRGSC Trigger: GCAGGAGCCTCTCTGATCTCAGGGGAAGCCTGTGCC...TGATGCAAGTTGGATCCCTGGAATCCACATGGTAGAAGGAGAGAACTGATTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR GCA 90 bp | AGTGACCTGACCTTACCAAGCCAGCCCTTCAAAAGAGGGCACAGGCTTCCCCTGTATGTTTCTCGGTGCTaGATTGTACCTAACCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SDLTLPSQPFKRGHRLPLYVSRC*IVPNLH Trigger: GTGGAGGTTAGGTACAATGCAGCACCGAGAAACATA...CAGGGGAAGCCTGTGCCCTCTTTTGAAGGGCTGGCTTGGTAAGGTCAGGTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTACTCCCTGCTTCCAGGGGACACAAGGACTACAGGAATAGTGATAAGACAAACTAGATGCAGCCCCTaGCCCTGGATCCAACTCGAA | + |
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Preference number: 2 (lower is better) Translates to: PYSLLPGDTRTTGIVIRQTRCSP*PWIQLE Trigger: TTCGAGTTGGATCCAGGGTCAGGGGCTGCATCTAGT...TTGTCTTATCACTATTCCTGTAGTCCTTGTGTCCCCTGGAAGCAGGGAGTAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTACTCCCTGCTTCCAGGGGACACAAGGACTACAGGAATAGTGATAAGACAAGTACCTTCAACCCTATaGGGTGCAGTCAAGGTAACC | + |
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Preference number: 2 (lower is better) Translates to: PYSLLPGDTRTTGIVIRQVPSTL*GAVKVT Trigger: GGTTACCTTGACTGCACCTCATAGGGTTGAAGGTAC...TTGTCTTATCACTATTCCTGTAGTCCTTGTGTCCCCTGGAAGCAGGGAGTAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAATCAGTTCTCTCCTTCTACCATGTGGATTCCAGGGATCCAACTTGCATCACTGCTGTGGCCCTGGTaGGAGGCACTTTCCTGTATA | + |
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Preference number: 2 (lower is better) Translates to: KNQFSPSTMWIPGIQLASLLWPW*EALSCI Trigger: TATACAGGAAAGTGCCTCCCACCAGGGCCACAGCAG...TGATGCAAGTTGGATCCCTGGAATCCACATGGTAGAAGGAGAGAACTGATTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTACTCCCTGCTTCCAGGGGACACAAGGACTACAGGAATAGTGATAAGACAAAATAAAAAGGCAGGCTaGGGATGTAGCTCAGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: PYSLLPGDTRTTGIVIRQNKKAG*GCSSVV Trigger: CACCACTGAGCTACATCCCCAGCCTGCCTTTTTATT...TTGTCTTATCACTATTCCTGTAGTCCTTGTGTCCCCTGGAAGCAGGGAGTAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR TCA 90 bp | TATTGCTCCTACACATTAATTTCTGAAGCAGGGTCTTATGACAATAAAGCCCAGGGCACCGAAGACCTGTaGCCTGTAGCCCTTTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: YCSYTLISEAGSYDNKAQGTEDL*PVALSS Trigger: AGAGGAAAGGGCTACAGGTCACAGGTCTTCGGTGCC...CTGGGCTTTATTGTCATAAGACCCTGCTTCAGAAATTAATGTGTAGGAGCAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR CAA 90 bp | CCCTTCTCTCATACATATATTTGCAGTGCTAGGCTTCTCACATGCTaGACAAGGGCCATACAACTGAACTGTATCCCCAGCCCTAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: PFSHTYICSARLLTC*TRAIQLNCIPSPKK Trigger: CTTTTTAGGGCTGGGGATACAGTTCAGTTGTATGGCCCTTGTCAAGCATGTGAGAAGCCTAGCACTGCAAATATATGTATGAGAGAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR CAA 90 bp | GAACTGCAGCAGTTACACCTGCAGTACTGGGAGGTACTAGATTTGTaGAAGACTTCACCTGTTTACAAAGGCAGCACATTGGCAAACCTA | + |
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Preference number: 2 (lower is better) Translates to: ELQQLHLQYWEVLDL*KTSPVYKGSTLANL Trigger: TAGGTTTGCCAATGTGCTGCCTTTGTAAACAGGTGAAGTCTTCAACAAATCTAGTACCTCCCAGTACTGCAGGTGTAACTGCTGCAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGAATCAGTTCTCTCCTTCTACCATGTGGATTCCAGGGATCCAACTTGCATCGTAGACAACTACTTCTaGTCACAGTGCTGGGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: QESVLSFYHVDSRDPTCIVDNYF*SQCWAL Trigger: TAAAGCCCAGCACTGTGATCAGAAGTAGTTGTCTAC...GATGCAAGTTGGATCCCTGGAATCCACATGGTAGAAGGAGAGAACTGATTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTATGGGGTATTCAATTACTACAAGAAAGTCAAAATCAGTCCAACAGAGCTACCAGGACTAGGAGTCTaGTTCATGCGCGAAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: LYGVFNYYKKVKISPTELPGLGV*FMREEP Trigger: GGGCTCTTCGCGCATGAAGCAGACTCCTAGTCCTGG...TAGCTCTGTTGGACTGATTTTGACTTTCTTGTAGTAATTGAATACCCCATACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTACTCCCTGCTTCCAGGGGACACAAGGACTACAGGAATAGTGATAAGACAATTGAAGCAAGGTTTGTaGGGTAAGAAGACATCAGGT | + |
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Preference number: 2 (lower is better) Translates to: PYSLLPGDTRTTGIVIRQLKQGL*GKKTSG Trigger: ACCTGATGTCTTCTTACCCCACAAACCTTGCTTCAA...TTGTCTTATCACTATTCCTGTAGTCCTTGTGTCCCCTGGAAGCAGGGAGTAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR CAA 90 bp | CTGAAGCAGGGTCTTATGACAATAAAGCCCAGGCTGGATTTGAACTaGGTAATTCTCCTGCCTAGAAGAGCTAGAATTACATGCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LKQGLMTIKPRLDLN*VILLPRRARITCSA Trigger: AGCTGAGCATGTAATTCTAGCTCTTCTAGGCAGGAGAATTACCAAGTTCAAATCCAGCCTGGGCTTTATTGTCATAAGACCCTGCTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTATGGGGTATTCAATTACTACAAGAAAGTCAAAATCAGTCCAACAGAGCTATGTCCATTCACACACTaGTTCACAGCGAGGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LYGVFNYYKKVKISPTELCPFTH*FTARPG Trigger: CCCAGGCCTCGCTGTGAAGCAGTGTGTGAATGGACA...TAGCTCTGTTGGACTGATTTTGACTTTCTTGTAGTAATTGAATACCCCATACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGAATCAGTTCTCTCCTTCTACCATGTGGATTCCAGGGATCCAACTTGCATCTACTTGAAAGGGGCTTaGTGTCAAAAATGGCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: QESVLSFYHVDSRDPTCIYLKGA*CQKWQF Trigger: AAACTGCCATTTTTGACATCAAGCCCCTTTCAAGTA...GATGCAAGTTGGATCCCTGGAATCCACATGGTAGAAGGAGAGAACTGATTCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR CCA 90 bp | TATTGCTCCTACACATTAATTTCTGAAGCAGGGTCTTATGACAATAAAGCCCAGCTTCACAGCGAGGCCTaGGCTCATTTCCTTGACTTA | + |
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Preference number: 2 (lower is better) Translates to: YCSYTLISEAGSYDNKAQLHSEA*AHFLDL Trigger: TAAGTCAAGGAAATGAGCCCAGGCCTCGCTGTGAAG...CTGGGCTTTATTGTCATAAGACCCTGCTTCAGAAATTAATGTGTAGGAGCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR GCA 90 bp | CACAGAGAAAGAGCCCTCGCTTCAGATGAAATTCAGACTTGTAAGGCCCTGAGAATAGATTTGGCCCAGTaGAAATACAGAAAATATCAG | + |
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Preference number: 2 (lower is better) Translates to: HRERALASDEIQTCKALRIDLAQ*KYRKYQ Trigger: CTGATATTTTCTGTATTTGCACTGGGCCAAATCTAT...TCTCAGGGCCTTACAAGTCTGAATTTCATCTGAAGCGAGGGCTCTTTCTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR TCA 90 bp | ATACGTAAGTACACTGTAGCTGTCTTTAGACACACCAGAAGAGGGCATCAGATCACTGAACAAGTTCTGTaGACTGAAATACTAATACCC | + |
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Preference number: 2 (lower is better) Translates to: IRKYTVAVFRHTRRGHQITEQVL*TEILIP Trigger: GGGTATTAGTATTTCAGTTCACAGAACTTGTTCAGT...GATCTGATGCCCTCTTCTGGTGTGTCTAAAGACAGCTACAGTGTACTTACGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR TCA 90 bp | AAGAATCAGTTCTCTCCTTCTACCATGTGGATTCCAGGGATCCAACTTGCATCACTACTACAAGTGCACTaGTTACTGTTCACTGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: KNQFSPSTMWIPGIQLASLLQVH*LLFTEK Trigger: TTTTTCAGTGAACAGTAATCAGTGCACTTGTAGTAG...TGATGCAAGTTGGATCCCTGGAATCCACATGGTAGAAGGAGAGAACTGATTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTATGGGGTATTCAATTACTACAAGAAAGTCAAAATCAGTCCAACAGAGCTAATGGATTGTGTCACATaGACGCACAGAGAAAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: LYGVFNYYKKVKISPTELMDCVT*THRERA Trigger: GGCTCTTTCTCTGTGCGTTCATGTGACACAATCCAT...TAGCTCTGTTGGACTGATTTTGACTTTCTTGTAGTAATTGAATACCCCATACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR TCA 90 bp | TATGGGGTATTCAATTACTACAAGAAAGTCAAAATCAGTCCAACAGAGCTATCCGGCATGAAGATGGTATaGGCAGAGAAAGGAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: YGVFNYYKKVKISPTELSGMKMV*AEKGDR Trigger: TCTGTCTCCTTTCTCTGCTCATACCATCTTCATGCC...GGATAGCTCTGTTGGACTGATTTTGACTTTCTTGTAGTAATTGAATACCCCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR GCA 90 bp | AAGAATCAGTTCTCTCCTTCTACCATGTGGATTCCAGGGATCCAACTTGCATCAACTAAACTTTCCTGGTaGATCTTAATGGTGTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: KNQFSPSTMWIPGIQLASTKLSW*ILMVCR Trigger: TCTACACACCATTAAGATGCACCAGGAAAGTTTAGT...TGATGCAAGTTGGATCCCTGGAATCCACATGGTAGAAGGAGAGAACTGATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR GCA 90 bp | ATACGTAAGTACACTGTAGCTGTCTTTAGACACACCAGAAGAGGGCATCAGATCACACCTCATGGAAACTaGATGTATATGTACTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: IRKYTVAVFRHTRRGHQITPHGN*MYMYFG Trigger: TCCAAAGTACATATACATGCAGTTTCCATGAGGTGT...GATCTGATGCCCTCTTCTGGTGTGTCTAAAGACAGCTACAGTGTACTTACGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR GCA 90 bp | ATACGTAAGTACACTGTAGCTGTCTTTAGACACACCAGAAGAGGGCATCAGATCTCTCATACATATATTTaGAGTGCTAGGCTTCTCACA | + |
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Preference number: 2 (lower is better) Translates to: IRKYTVAVFRHTRRGHQISHTYI*SARLLT Trigger: TGTGAGAAGCCTAGCACTGCAAATATATGTATGAGA...GATCTGATGCCCTCTTCTGGTGTGTCTAAAGACAGCTACAGTGTACTTACGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAATCAGTTCTCTCCTTCTACCATGTGGATTCCAGGGATCCAACTTGCATCACTAACTAAACTTTCCTaGTGCATCTTAATGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: KNQFSPSTMWIPGIQLASLTKLS*CILMVC Trigger: ACACACCATTAAGATGCACCAGGAAAGTTTAGTTAG...TGATGCAAGTTGGATCCCTGGAATCCACATGGTAGAAGGAGAGAACTGATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR GCA 90 bp | TATTGCTCCTACACATTAATTTCTGAAGCAGGGTCTTATGACAATAAAGCCCAGTGGGCATCGCTTTTATaGTTACAAGGCTTGATGATG | + |
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Preference number: 2 (lower is better) Translates to: YCSYTLISEAGSYDNKAQWASLL*LQGLMM Trigger: CATCATCAAGCCTTGTAAGCATAAAAGCGATGCCCA...CTGGGCTTTATTGTCATAAGACCCTGCTTCAGAAATTAATGTGTAGGAGCAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR GCA 90 bp | CAATATCTCTTGTCATGGACCAGAATGCATCAAATGTGTAAGGACTTTGCAAGTTGTCAACAGGGAGACTaGATTTGTAGATGGTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: QYLLSWTRMHQMCKDFASCQQGD*ICRWCQ Trigger: TTGACACCATCTACAAATGCAGTCTCCCTGTTGACA...ACTTGCAAAGTCCTTACACATTTGATGCATTCTGGTCCATGACAAGAGATATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTATGGGGTATTCAATTACTACAAGAAAGTCAAAATCAGTCCAACAGAGCTACTGGCCTACTACAAGTaGACTGATTACTGTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: LYGVFNYYKKVKISPTELLAYYK*TDYCSL Trigger: CAGTGAACAGTAATCAGTGCACTTGTAGTAGGCCAG...TAGCTCTGTTGGACTGATTTTGACTTTCTTGTAGTAATTGAATACCCCATACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR TCA 90 bp | CAATATCTCTTGTCATGGACCAGAATGCATCAAATGTGTAAGGACTTTGCAAGTACAAGTTCTGTGAACTaGAATACTAATACCCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: QYLLSWTRMHQMCKDFASTSSVN*NTNTPR Trigger: TCTGGGGGTATTAGTATTTCAGTTCACAGAACTTGT...ACTTGCAAAGTCCTTACACATTTGATGCATTCTGGTCCATGACAAGAGATATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR GCA 90 bp | TCTGTTAATCTAACTGACAATATCTCTTGTCATGGACCAGAATGCATCAAATGTTTCAACCCTATGAGGTaGAGTCAAGGTAACCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: SVNLTDNISCHGPECIKCFNPMR*SQGNPN Trigger: GTTAGGGTTACCTTGACTGCACCTCATAGGGTTGAA...ACATTTGATGCATTCTGGTCCATGACAAGAGATATTGTCAGTTAGATTAACAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR GCA 90 bp | TATGGGGTATTCAATTACTACAAGAAAGTCAAAATCAGTCCAACAGAGCTATCCAGCCAGGAGCTCTATTaGTACAAGGAAATGGATTGT | + |
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Preference number: 2 (lower is better) Translates to: YGVFNYYKKVKISPTELSSQELY*YKEMDC Trigger: ACAATCCATTTCCTTGTAGCAATAGAGCTCCTGGCT...GGATAGCTCTGTTGGACTGATTTTGACTTTCTTGTAGTAATTGAATACCCCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR CCA 90 bp | GCTATTTTTAGGACTATTCAAGTTAATGGAATTGCTGGGTTAATTTCTGGGGCTGACTGCATTTGTAGATaGTGTCAACTGAACAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: AIFRTIQVNGIAGLISGADCICR*CQLNKF Trigger: GAACTTGTTCAGTTGACACCATCTACAAATGCAGTC...AGCCCCAGAAATTAACCCAGCAATTCCATTAACTTGAATAGTCCTAAAAATAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR CAA 90 bp | CTATGTCAATATTTAAAATATAACTCAAGCTGTCTCTTAATCCTCTaGACTGGAGAAAGTGAAGGAAGGTCAAAGCCTTGGTTAGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: LCQYLKYNSSCLLIL*TGESEGRSKPWLVS Trigger: TGACACTAACCAAGGCTTTGACCTTCCTTCACTTTCTCCAGTCAAGAGGATTAAGAGACAGCTTGAGTTATATTTTAAATATTGACATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR TCA 90 bp | GCTATTTTTAGGACTATTCAAGTTAATGGAATTGCTGGGTTAATTTCTGGGGCTGCTAAAAGGAGCCATTaGGGTATACTCTTAAAAACA | + |
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Preference number: 2 (lower is better) Translates to: AIFRTIQVNGIAGLISGAAKRSH*GILLKT Trigger: TGTTTTTAAGAGTATACCTCAATGGCTCCTTTTAGC...AGCCCCAGAAATTAACCCAGCAATTCCATTAACTTGAATAGTCCTAAAAATAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| 3UTR-3UTR CCA 90 bp | TATGGGGTATTCAATTACTACAAGAAAGTCAAAATCAGTCCAACAGAGCTATCCCAATATCTCTTGTCATaGACCAGAATGCATCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: YGVFNYYKKVKISPTELSQYLLS*TRMHQM Trigger: CATTTGATGCATTCTGGTCCATGACAAGAGATATTG...GGATAGCTCTGTTGGACTGATTTTGACTTTCTTGTAGTAATTGAATACCCCATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTGTTAATCTAACTGACAATATCTCTTGTCATGGACCAGAATGCATCAAATGTGACCTACAGAAACTGTaGAACAAACATATGTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: SVNLTDNISCHGPECIKCDLQKL*NKHMSC Trigger: ACATGACATATGTTTGTTTCACAGTTTCTGTAGGTC...ACATTTGATGCATTCTGGTCCATGACAAGAGATATTGTCAGTTAGATTAACAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR GCA 72 bp | GAAACAGGGCAGGAGCAGGAACCACAAGGGACTGACTaGTGTGGCCCTGGTGGGAGGCACTTTCCTGTATAC | + |
|
Preference number: 3 (lower is better) Translates to: ETGQEQEPQGTD*CGPGGRHFPVY Trigger: GTATACAGGAAAGTGCCTCCCACCAGGGCCACAGCAGTCAGTCCCTTGTGGTTCCTGCTCCTGCCCTGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGACCTGACCTTACCAAGCCAGCCCTTCAAAAGAGGGCACAGGCTTCCCCTGCCTGGGCTCATTTCCTaGACTTATATGGGCATCGCT | + |
|
Preference number: 3 (lower is better) Translates to: SDLTLPSQPFKRGHRLPLPGLIS*TYMGIA Trigger: AGCGATGCCCATATAAGTCAAGGAAATGAGCCCAGG...CAGGGGAAGCCTGTGCCCTCTTTTGAAGGGCTGGCTTGGTAAGGTCAGGTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGACCTGACCTTACCAAGCCAGCCCTTCAAAAGAGGGCACAGGCTTCCCCTGTGTCTCTTAATCCTCTaGACTGGAGAAAGTGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SDLTLPSQPFKRGHRLPLCLLIL*TGESEG Trigger: TCCTTCACTTTCTCCAGTCAAGAGGATTAAGAGACA...CAGGGGAAGCCTGTGCCCTCTTTTGAAGGGCTGGCTTGGTAAGGTCAGGTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGACCTGACCTTACCAAGCCAGCCCTTCAAAAGAGGGCACAGGCTTCCCCTGTTCAATGCTATAGATTaGGCCCAGTGCAAATACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SDLTLPSQPFKRGHRLPLFNAID*AQCKYR Trigger: TCTGTATTTGCACTGGGCCAAATCTATAGCATTGAA...CAGGGGAAGCCTGTGCCCTCTTTTGAAGGGCTGGCTTGGTAAGGTCAGGTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR CCA 72 bp | TTAAAGAGCAGTAGGCCAGCAATGGGAATACAGATGTaGCAGAACTGCAGCAGTTACACCTGCAGTACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LKSSRPAMGIQM*QNCSSYTCSTG Trigger: CCCAGTACTGCAGGTGTAACTGCTGCAGTTCTGCCACATCTGTATTCCCATTGCTGGCCTACTGCTCTTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR-3UTR CAA 90 bp | CACAGAGAAAGAGCCCTCGCTTCAGATGAAATTCAGACTTGTAAGGCCCTGAGAGAAGGCAAATCAAGCTaGCATGCGTCCACATACAGC | + |
|
Preference number: 3 (lower is better) Translates to: HRERALASDEIQTCKALREGKSS*HASTYS Trigger: GCTGTATGTGGACGCATGCAAGCTTGATTTGCCTTC...TCTCAGGGCCTTACAAGTCTGAATTTCATCTGAAGCGAGGGCTCTTTCTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR CCA 72 bp | TGGCCCTGGTGGGAGGCACTTTCCTGTATACTCAGCTaGTCTCACAAAGCAGAAGCTATTAAAGTCAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: WPWWEALSCILS*SHKAEAIKVRK Trigger: TTTTCTGACTTTAATAGCTTCTGCTTTGTGAGACCAGCTGAGTATACAGGAAAGTGCCTCCCACCAGGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR CCA 72 bp | GCAACCTTCAAGAATCAGTTCTCTCCTTCTACCATGTaGATTCCAGGGATCCAACTTGCATCAGGCTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: ATFKNQFSPSTM*IPGIQLASGLL Trigger: CAACAAGCCTGATGCAAGTTGGATCCCTGGAATCCACATGGTAGAAGGAGAGAACTGATTCTTGAAGGTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR CCA 72 bp | GATGTGGCAGAACTGCAGCAGTTACACCTGCAGTACTaGGAGGTACTAGATTTGTTGAAGACTTCACCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: DVAELQQLHLQY*EVLDLLKTSPV Trigger: AACAGGTGAAGTCTTCAACAAATCTAGTACCTCCCAGTACTGCAGGTGTAACTGCTGCAGTTCTGCCACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR TCA 72 bp | CTCAAGCTGTCTCTTAATCCTCTTGACTGGAGAAAGTaGAGGAAGGTCAAAGCCTTGGTTAGTGTCAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LKLSLNPLDWRK*RKVKALVSVNR Trigger: CCTGTTGACACTAACCAAGGCTTTGACCTTCCTTCACTTTCTCCAGTCAAGAGGATTAAGAGACAGCTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR TCA 72 bp | AGGACCTTTGGAAGAGCAGTCAGTGCTCTTTTCCATTaGGCCATCTCACCAGCCCTACAGCATCATTTATTA | + |
|
Preference number: 3 (lower is better) Translates to: RTFGRAVSALFH*AISPALQHHLL Trigger: TAATAAATGATGCTGTAGGGCTGGTGAGATGGCTCAATGGAAAAGAGCACTGACTGCTCTTCCAAAGGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR TCA 72 bp | CAGAATTCAGGCACGTTCATGTTTACAGAGCGTTGCTaGTATGCTGACCTTGCCCTTAAGGAGCTTACAATC | + |
|
Preference number: 3 (lower is better) Translates to: QNSGTFMFTERC*YADLALKELTI Trigger: GATTGTAAGCTCCTTAAGGGCAAGGTCAGCATATCAGCAACGCTCTGTAAACATGAACGTGCCTGAATTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGAATCAGTTCTCTCCTTCTACCATGTGGATTCCAGGGATCCAACTTGCATCACAGAAAAAGAAGAGCTaGACACAGACATCCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KNQFSPSTMWIPGIQLASQKKKS*TQTSRA Trigger: TGCTCTGGATGTCTGTGTCAAGCTCTTCTTTTTCTG...TGATGCAAGTTGGATCCCTGGAATCCACATGGTAGAAGGAGAGAACTGATTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR TCA 72 bp | AAGAGGGCATCAGATCTCATTACAGATAACCATCTGTaGGCCATCATGTGGTTGCTAGGATTTGAACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KRASDLITDNHL*AIMWLLGFELR Trigger: CCTGAGTTCAAATCCTAGCAACCACATGATGGCTCACAGATGGTTATCTGTAATGAGATCTGATGCCCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR GCA 72 bp | TCTCATACATATATTTGCAGTGCTAGGCTTCTCACATaGTTGACAAGGGCCATACAACTGAACTGTATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SHTYICSARLLT*LTRAIQLNCIP Trigger: GGGGATACAGTTCAGTTGTATGGCCCTTGTCAAGCATGTGAGAAGCCTAGCACTGCAAATATATGTATGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR-3UTR CAA 90 bp | ATACGTAAGTACACTGTAGCTGTCTTTAGACACACCAGAAGAGGGCATCAGATCTATGCACTTTGTCATTaGGAGCCACATGTTGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: IRKYTVAVFRHTRRGHQIYALCH*EPHVGY Trigger: ATAGCCAACATGTGGCTCCAAATGACAAAGTGCATA...GATCTGATGCCCTCTTCTGGTGTGTCTAAAGACAGCTACAGTGTACTTACGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR CCA 72 bp | AGTATTACGGTATGCTTAAACAATAAAAAGGCAGGCTaGGGATGTAGCTCAGTGGTGTTTAGCATGCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SITVCLNNKKAG*GCSSVVFSMLA Trigger: TGCTAGCATGCTAAACACCACTGAGCTACATCCCCAGCCTGCCTTTTTATTGTTTAAGCATACCGTAATACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR-3UTR CAA 90 bp | TATTGCTCCTACACATTAATTTCTGAAGCAGGGTCTTATGACAATAAAGCCCAGTCCCATGAGCCAAGCTaGATGGATCAACCCTTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: YCSYTLISEAGSYDNKAQSHEPS*MDQPFL Trigger: TAAAAAGGGTTGATCCATCAAGCTTGGCTCATGGGA...CTGGGCTTTATTGTCATAAGACCCTGCTTCAGAAATTAATGTGTAGGAGCAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTTAATCTAACTGACAATATCTCTTGTCATGGACCAGAATGCATCAAATGTAGGAAGGTCAAAGCCTaGGTTAGTGTCAACAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SVNLTDNISCHGPECIKCRKVKA*VSVNRE Trigger: CTCCCTGTTGACACTAACCAAGGCTTTGACCTTCCT...ACATTTGATGCATTCTGGTCCATGACAAGAGATATTGTCAGTTAGATTAACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR-3UTR CAA 90 bp | TATGGGGTATTCAATTACTACAAGAAAGTCAAAATCAGTCCAACAGAGCTATCCGGCCTTGTATGCACTTaGTCATTTGGAGCCACATGT | + |
|
Preference number: 3 (lower is better) Translates to: YGVFNYYKKVKISPTELSGLVCT*SFGATC Trigger: ACATGTGGCTCCAAATGACAAAGTGCATACAAGGCC...GGATAGCTCTGTTGGACTGATTTTGACTTTCTTGTAGTAATTGAATACCCCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR GCA 72 bp | CATTTATTAAGAGTTAATGTGCACTACATAGGAAAATaGAGTAGCATGCAGAGGCTGAGGCATGAAGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: HLLRVNVHYIGK*SSMQRLRHEDG Trigger: ACCATCTTCATGCCTCAGCCTCTGCATGCTACTGCATTTTCCTATGTAGTGCACATTAACTCTTAATAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR GCA 72 bp | AAGACACTCTTAAGTCAGAGAGTTAGTATTACGGTATaGTTAAACAATAAAAAGGCAGGCTGGGGATGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: KTLLSQRVSITV*LNNKKAGWGCS Trigger: GCTACATCCCCAGCCTGCCTTTTTATTGTTTAAGCATACCGTAATACTAACTCTCTGACTTAAGAGTGTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTATTTTTAGGACTATTCAAGTTAATGGAATTGCTGGGTTAATTTCTGGGGCTGTACTTGAAAGGGGCTaGATGTCAAAAATGGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: AIFRTIQVNGIAGLISGAVLERG*MSKMAV Trigger: AACTGCCATTTTTGACATCAAGCCCCTTTCAAGTAC...AGCCCCAGAAATTAACCCAGCAATTCCATTAACTTGAATAGTCCTAAAAATAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR TCA 72 bp | CTGTGGGAGAGGTTATCTAGAACATCCCATCAATTATaGGTCAGATTATGGAAAGTTTCCACATTTCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LWERLSRTSHQL*VRLWKVSTFLW Trigger: CCAAAGAAATGTGGAAACTTTCCATAATCTGACTCATAATTGATGGGATGTTCTAGATAACCTCTCCCACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR TCA 72 bp | ATGGAAACTGCATGTATATGTACTTTGGAGGGAAACTaGACCAGAATTTTTGATAGTCTCTCACAGGTAATC | + |
|
Preference number: 3 (lower is better) Translates to: METACICTLEGN*TRIFDSLSQVI Trigger: GATTACCTGTGAGAGACTATCAAAAATTCTGGTTCAGTTTCCCTCCAAAGTACATATACATGCAGTTTCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR TCA 72 bp | CAGCATTTAATAATAAGTCCAGTAGACAACTACTTCTaGTCACAGTGCTGGGCTTTACAGCATCCTTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QHLIISPVDNYF*SQCWALQHPFK Trigger: TTTAAAAGGATGCTGTAAAGCCCAGCACTGTGATCAGAAGTAGTTGTCTACTGGACTTATTATTAAATGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR-3UTR CAA 90 bp | TATGGGGTATTCAATTACTACAAGAAAGTCAAAATCAGTCCAACAGAGCTATCCCAACTTGCATCAGGCTaGTTGTTGGATAAAATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: YGVFNYYKKVKISPTELSQLASG*LLDKIN Trigger: GTTTATTTTATCCAACAACAAGCCTGATGCAAGTTG...GGATAGCTCTGTTGGACTGATTTTGACTTTCTTGTAGTAATTGAATACCCCATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| CDS-3UTR TCA 90 bp | AGTGACCTGACCTTACCAAGCCAGCCCTTCAAAAGAGGGCACAGGCTTCCCCTGGCTGGAAGAATCTCCTaGATTGTCTCCATTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDLTLPSQPFKRGHRLPLAGRIS*IVSIGG Trigger: ACCACCAATGGAGACAATTCAGGAGATTCTTCCAGC...CAGGGGAAGCCTGTGCCCTCTTTTGAAGGGCTGGCTTGGTAAGGTCAGGTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| CDS-3UTR TCA 90 bp | TATCACACACTTTTATTGAGTGCCCACAGAATTCAGGCACGTTCATGTTTACAGGAGGCAGCCTCGATCTaGGGGCCCGGCTTTACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YHTLLLSAHRIQARSCLQEAASI*GPGFTA Trigger: GGCCGTAAAGCCGGGCCCTCAGATCGAGGCTGCCTC...CTGTAAACATGAACGTGCCTGAATTCTGTGGGCACTCAATAAAAGTGTGTGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| CDS-3UTR CCA 90 bp | TATTGCTCCTACACATTAATTTCTGAAGCAGGGTCTTATGACAATAAAGCCCAGCGGGCCTCCGCTTCCTaGCTGGCCTCTCCTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YCSYTLISEAGSYDNKAQRASAS*LASPAL Trigger: CAGGGCAGGAGAGGCCAGCCAGGAAGCGGAGGCCCG...CTGGGCTTTATTGTCATAAGACCCTGCTTCAGAAATTAATGTGTAGGAGCAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| CDS-3UTR CCA 90 bp | TATCACACACTTTTATTGAGTGCCCACAGAATTCAGGCACGTTCATGTTTACAGTCTCGTTGTCCGCCATaGCCGGGCCGGCGACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YHTLLLSAHRIQARSCLQSRCPP*PGRRLS Trigger: GGAGAGTCGCCGGCCCGGCCATGGCGGACAACGAGA...CTGTAAACATGAACGTGCCTGAATTCTGTGGGCACTCAATAAAAGTGTGTGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| CDS-3UTR GCA 90 bp | TCTGTTAATCTAACTGACAATATCTCTTGTCATGGACCAGAATGCATCAAATGTGGCGGCGGAATGTGCTaGCGGCTGAGAGGGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVNLTDNISCHGPECIKCGGGMC*RLRGGG Trigger: GCCTCCCCCTCTCAGCCGGCAGCACATTCCGCCGCC...ACATTTGATGCATTCTGGTCCATGACAAGAGATATTGTCAGTTAGATTAACAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| CDS-3UTR GCA 90 bp | TATTGCTCCTACACATTAATTTCTGAAGCAGGGTCTTATGACAATAAAGCCCAGCTGGCTGGCCTCTCCTaGCCTGAGCTCGGGTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: YCSYTLISEAGSYDNKAQLAGLS*PELGYH Trigger: GTGGTACCCGAGCTCAGGGCAGGAGAGGCCAGCCAG...CTGGGCTTTATTGTCATAAGACCCTGCTTCAGAAATTAATGTGTAGGAGCAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| CDS-3UTR CCA 90 bp | CACAGAGAAAGAGCCCTCGCTTCAGATGAAATTCAGACTTGTAAGGCCCTGAGAAAAGTGGCACAGCATTaGACTGAACCACTGCTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: HRERALASDEIQTCKALRKVAQH*TEPLLA Trigger: CGCAAGCAGTGGTTCAGTCCAATGCTGTGCCACTTT...TCTCAGGGCCTTACAAGTCTGAATTTCATCTGAAGCGAGGGCTCTTTCTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| CDS-3UTR TCA 90 bp | CAAGAATCAGTTCTCTCCTTCTACCATGTGGATTCCAGGGATCCAACTTGCATCGAGGTCCATCACCTATaGTGTTTCCCAACGCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: QESVLSFYHVDSRDPTCIEVHHL*CFPTPI Trigger: TATGGGCGTTGGGAAACATCATAGGTGATGGACCTC...GATGCAAGTTGGATCCCTGGAATCCACATGGTAGAAGGAGAGAACTGATTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| CDS-3UTR CCA 90 bp | CAAGAATCAGTTCTCTCCTTCTACCATGTGGATTCCAGGGATCCAACTTGCATCACTTTAACTTCCTGGTaGCTGAGTAGCGGAACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QESVLSFYHVDSRDPTCITLTSW*LSSGTK Trigger: CTTGGTTCCGCTACTCAGCCACCAGGAAGTTAAAGT...GATGCAAGTTGGATCCCTGGAATCCACATGGTAGAAGGAGAGAACTGATTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR CAA 72 bp | CATACATATATTTGCAGTGCTAGGCTTCTCACATGCTaGACAAGGGCCATACAACTGAACTGTATCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTYICSARLLTC*TRAIQLNCIPS Trigger: GCTGGGGATACAGTTCAGTTGTATGGCCCTTGTCAAGCATGTGAGAAGCCTAGCACTGCAAATATATGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| CDS-3UTR TCA 90 bp | CAATATCTCTTGTCATGGACCAGAATGCATCAAATGTGTAAGGACTTTGCAAGTCGCAGTGCAGCAGTCTaGACTTTAACTTCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QYLLSWTRMHQMCKDFASRSAAV*TLTSWW Trigger: CCACCAGGAAGTTAAAGTTCAGACTGCTGCACTGCG...ACTTGCAAAGTCCTTACACATTTGATGCATTCTGGTCCATGACAAGAGATATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR CAA 72 bp | CAGTTACACCTGCAGTACTGGGAGGTACTAGATTTGTaGAAGACTTCACCTGTTTACAAAGGCAGCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: QLHLQYWEVLDL*KTSPVYKGSTL Trigger: CAATGTGCTGCCTTTGTAAACAGGTGAAGTCTTCAACAAATCTAGTACCTCCCAGTACTGCAGGTGTAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| CDS-3UTR GCA 90 bp | CCTTACTCCCTGCTTCCAGGGGACACAAGGACTACAGGAATAGTGATAAGACAAATTGGCTATGGTTTCTaGTTGATCTTCAGCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PYSLLPGDTRTTGIVIRQIGYGF*LIFSHF Trigger: AAAATGGCTGAAGATCAAGCAGAAACCATAGCCAAT...TTGTCTTATCACTATTCCTGTAGTCCTTGTGTCCCCTGGAAGCAGGGAGTAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR CAA 72 bp | GGTCTTATGACAATAAAGCCCAGGCTGGATTTGAACTaGGTAATTCTCCTGCCTAGAAGAGCTAGAATTACA | + |
|
Preference number: 4 (lower is better) Translates to: GLMTIKPRLDLN*VILLPRRARIT Trigger: TGTAATTCTAGCTCTTCTAGGCAGGAGAATTACCAAGTTCAAATCCAGCCTGGGCTTTATTGTCATAAGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| 3UTR CAA 72 bp | AAAAGAACACTAATATACACACTATCGCACCACCTCTaGTCATATGATATACGTGATCACCAGAGGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRTLIYTLSHHL*SYDIRDHQRTA Trigger: GGCTGTCCTCTGGTGATCACGTATATCATATGACAAGAGGTGGTGCGATAGTGTGTATATTAGTGTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| CDS-3UTR TCA 90 bp | AAGAATCAGTTCTCTCCTTCTACCATGTGGATTCCAGGGATCCAACTTGCATCAAGATGGACTTATGAATaGAAGCAGAGGTTTTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: KNQFSPSTMWIPGIQLASRWTYE*KQRFYN Trigger: GTTGTAAAACCTCTGCTTTCATTCATAAGTCCATCT...TGATGCAAGTTGGATCCCTGGAATCCACATGGTAGAAGGAGAGAACTGATTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| CDS-3UTR GCA 90 bp | CAATATCTCTTGTCATGGACCAGAATGCATCAAATGTGTAAGGACTTTGCAAGTCTGCTGTTGATTTCCTaGAGTGATGTTGGAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QYLLSWTRMHQMCKDFASLLLIS*SDVGEE Trigger: TTCCTCTCCAACATCACTGCAGGAAATCAACAGCAG...ACTTGCAAAGTCCTTACACATTTGATGCATTCTGGTCCATGACAAGAGATATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| CDS-3UTR CCA 90 bp | TATGGGGTATTCAATTACTACAAGAAAGTCAAAATCAGTCCAACAGAGCTATCCAAATTCTTGAGCCGTTaGTTGTCCAATTTCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YGVFNYYKKVKISPTELSKFLSR*LSNFSL Trigger: CAACGAGAAATTGGACAACCAACGGCTCAAGAATTT...GGATAGCTCTGTTGGACTGATTTTGACTTTCTTGTAGTAATTGAATACCCCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| CDS GCA 90 bp | CAACCACCGCGCCGCACAGACGCTCCCAGGAAGCCGGCCGCCGCCTaGGTCGCCCGCCCGTCCGCTCGCTTCCTCTCGCCCGCCGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QPPRRTDAPRKPAAA*VARPSARFLSPAGP Trigger: AGGCCCGGCGGGCGAGAGGAAGCGAGCGGACGGGCGGGCGACGCAGGCGGCGGCCGGCTTCCTGGGAGCGTCTGTGCGGCGCGGTGGTTG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
||
| CDS TCA 90 bp | CTCTCGCCCGCCGGGCCTCCGCTTCCTGGCTGGCCTCTCCTGCCCTaGGCTCGGGTACCACAGCAGCTCTGGCGAAGACGACTGCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LSPAGPPLPGWPLLP*ARVPQQLWRRRLRG Trigger: GCCCCGCAGTCGTCTTCGCCAGAGCTGCTGTGGTACCCGAGCTCAGGGCAGGAGAGGCCAGCCAGGAAGCGGAGGCCCGGCGGGCGAGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| CDS-3UTR CAA 90 bp | CACAGAGAAAGAGCCCTCGCTTCAGATGAAATTCAGACTTGTAAGGCCCTGAGATTGTCCAATTTCTCGTaGTCCGCCATGGCCGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: HRERALASDEIQTCKALRLSNFS*SAMAGP Trigger: CGGCCCGGCCATGGCGGACAACGAGAAATTGGACAA...TCTCAGGGCCTTACAAGTCTGAATTTCATCTGAAGCGAGGGCTCTTTCTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| CDS-3UTR CAA 90 bp | CCTTACTCCCTGCTTCCAGGGGACACAAGGACTACAGGAATAGTGATAAGACAAAAAATTCTTGAGCCGTaGGTTGTCCAATTTCTCGTT | + |
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Preference number: 5 (lower is better) Translates to: PYSLLPGDTRTTGIVIRQKILEP*VVQFLV Trigger: AACGAGAAATTGGACAACCAACGGCTCAAGAATTTT...TTGTCTTATCACTATTCCTGTAGTCCTTGTGTCCCCTGGAAGCAGGGAGTAAGG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| CDS-3UTR CAA 90 bp | CCTTACTCCCTGCTTCCAGGGGACACAAGGACTACAGGAATAGTGATAAGACAAAGGTGGAATAACATTTaGTTGGATAAGATAGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: PYSLLPGDTRTTGIVIRQRWNNI*LDKIGH Trigger: GTGGCCTATCTTATCCAACAAAATGTTATTCCACCT...TTGTCTTATCACTATTCCTGTAGTCCTTGTGTCCCCTGGAAGCAGGGAGTAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| CDS-3UTR CAA 90 bp | CCTTACTCCCTGCTTCCAGGGGACACAAGGACTACAGGAATAGTGATAAGACAATGGAATAACATTTTGTaGGATAAGATAGGCCACTTG | + |
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Preference number: 5 (lower is better) Translates to: PYSLLPGDTRTTGIVIRQWNNIL*DKIGHL Trigger: CAAGTGGCCTATCTTATCCAACAAAATGTTATTCCA...TTGTCTTATCACTATTCCTGTAGTCCTTGTGTCCCCTGGAAGCAGGGAGTAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| CDS-3UTR CAA 90 bp | TCTGTTAATCTAACTGACAATATCTCTTGTCATGGACCAGAATGCATCAAATGTAACCACTGCTTGCGTTaGTTCAGACGTTCCAGATGC | + |
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Preference number: 5 (lower is better) Translates to: SVNLTDNISCHGPECIKCNHCLR*FRRSRC Trigger: GCATCTGGAACGTCTGAACAAACGCAAGCAGTGGTT...ACATTTGATGCATTCTGGTCCATGACAAGAGATATTGTCAGTTAGATTAACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| CDS-3UTR CAA 90 bp | TCTGTTAATCTAACTGACAATATCTCTTGTCATGGACCAGAATGCATCAAATGTTTCTTGAGCCGTTGGTaGTCCAATTTCTCGTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: SVNLTDNISCHGPECIKCFLSRW*SNFSLS Trigger: GGACAACGAGAAATTGGACAACCAACGGCTCAAGAA...ACATTTGATGCATTCTGGTCCATGACAAGAGATATTGTCAGTTAGATTAACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| CDS-3UTR CAA 90 bp | GCTATTTTTAGGACTATTCAAGTTAATGGAATTGCTGGGTTAATTTCTGGGGCTTTGTTCTTAAAATTCTaGAGCCGTTGGTTGTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: AIFRTIQVNGIAGLISGALFLKF*SRWLSN Trigger: ATTGGACAACCAACGGCTCAAGAATTTTAAGAACAA...AGCCCCAGAAATTAACCCAGCAATTCCATTAACTTGAATAGTCCTAAAAATAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| CDS GCA 72 bp | CGCCGCACAGACGCTCCCAGGAAGCCGGCCGCCGCCTaGGTCGCCCGCCCGTCCGCTCGCTTCCTCTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: RRTDAPRKPAAA*VARPSARFLSP Trigger: GGGCGAGAGGAAGCGAGCGGACGGGCGGGCGACGCAGGCGGCGGCCGGCTTCCTGGGAGCGTCTGTGCGGCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| CDS GCA 72 bp | GGGGCCAGCGGCGGCGGCGGCAACGGCGGCGGAATGTaGTGCCGGCTGAGAGGGGGAGGCAGCCTCGATCTG | + |
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Preference number: 6 (lower is better) Translates to: GASGGGGNGGGM*CRLRGGGSLDL Trigger: CAGATCGAGGCTGCCTCCCCCTCTCAGCCGGCAGCACATTCCGCCGCCGTTGCCGCCGCCGCCGCTGGCCCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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| CDS GCA 72 bp | GCCAGCGGCGGCGGCGGCAACGGCGGCGGAATGTGCTaGCGGCTGAGAGGGGGAGGCAGCCTCGATCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: ASGGGGNGGGMC*RLRGGGSLDLR Trigger: CCTCAGATCGAGGCTGCCTCCCCCTCTCAGCCGGCAGCACATTCCGCCGCCGTTGCCGCCGCCGCCGCTGGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029353.9 |
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