Pregenerated sensors for KPNA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021929Ensembl transcript IDs: ENSMUST00000022496.9
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACATGGCTTGCTTTAGAAGCATCAAAATGAAGAGGCAAGAGTGCTaGGAGCCTTCTGTTGCTTGCTGTCTTATCGCTTGGTGGCCATCT | + |
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Preference number: 1 (lower is better) Translates to: DMACFRSIKMKRQEC*EPSVACCLIAWWPS Trigger: AGATGGCCACCAAGCGATAAGACAGCAAGCAACAGAAGGCTCCCAGCACTCTTGCCTCTTCATTTTGATGCTTCTAAAGCAAGCCATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR TCA 90 bp | TTGATCCACAGCGCACCTTTTTCCAAAGGCGTATCAGTGGGCAGCTaGTATACCACCACTATGGAATATTCTAACTGGAGACTGCAGTTG | + |
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Preference number: 1 (lower is better) Translates to: LIHSAPFSKGVSVGS*YTTTMEYSNWRLQL Trigger: CAACTGCAGTCTCCAGTTAGAATATTCCATAGTGGTGGTATATCAGCTGCCCACTGATACGCCTTTGGAAAAAGGTGCGCTGTGGATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR CCA 90 bp | CTTTTTCCAAAGGCGTATCAGTGGGCAGCTGATATACCACCACTATaGAATATTCTAACTGGAGACTGCAGTTGTCAGCATGTGGCACCA | + |
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Preference number: 1 (lower is better) Translates to: LFPKAYQWAADIPPL*NILTGDCSCQHVAP Trigger: TGGTGCCACATGCTGACAACTGCAGTCTCCAGTTAGAATATTCCATAGTGGTGGTATATCAGCTGCCCACTGATACGCCTTTGGAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR TCA 90 bp | AACTGCAAAGTGACTGAGACATGGCTTGCTTTAGAAGCATCAAAATaGAGAGGCAAGAGTGCTGGGAGCCTTCTGTTGCTTGCTGTCTTA | + |
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Preference number: 1 (lower is better) Translates to: NCKVTETWLALEASK*RGKSAGSLLLLAVL Trigger: TAAGACAGCAAGCAACAGAAGGCTCCCAGCACTCTTGCCTCTTCATTTTGATGCTTCTAAAGCAAGCCATGTCTCAGTCACTTTGCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR GCA 90 bp | GTGGCTCCACCTTGGCAGATACATATATTTGTAATGAAGCACACCTaGTATGTGTTGTTTATCAGTGAAAACACCCCAGCTGTTTCACAA | + |
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Preference number: 1 (lower is better) Translates to: VAPPWQIHIFVMKHT*YVLFISENTPAVSQ Trigger: TTGTGAAACAGCTGGGGTGTTTTCACTGATAAACAACACATAGCAGGTGTGCTTCATTACAAATATATGTATCTGCCAAGGTGGAGCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR CAA 90 bp | GAGGCAAGAGTGCTGGGAGCCTTCTGTTGCTTGCTGTCTTATCGCTaGGTGGCCATCTGGTGGTGTTTCATATTGAATGAAAGATGCTGC | + |
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Preference number: 2 (lower is better) Translates to: EARVLGAFCCLLSYR*VAIWWCFILNERCC Trigger: GCAGCATCTTTCATTCAATATGAAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCAACAGAAGGCTCCCAGCACTCTTGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR CAA 90 bp | AAGCATCAAAATGAAGAGGCAAGAGTGCTGGGAGCCTTCTGTTGCTaGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTCATATTG | + |
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Preference number: 2 (lower is better) Translates to: KHQNEEARVLGAFCC*LSYRLVAIWWCFIL Trigger: CAATATGAAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCAACAGAAGGCTCCCAGCACTCTTGCCTCTTCATTTTGATGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR CCA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCAAGAGGCAAGAGTGCTaGGAGCCTTCTGTTGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: CLSVKTPQLFHKALMASVKRQEC*EPSVAC Trigger: GCAAGCAACAGAAGGCTCCCAGCACTCTTGCCTCTT...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR CCA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCCCAAAGGCGTATCAGTaGGCAGCTGATATACCACCA | + |
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Preference number: 2 (lower is better) Translates to: CLSVKTPQLFHKALMASVPKAYQ*AADIPP Trigger: TGGTGGTATATCAGCTGCCCACTGATACGCCTTTGG...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR CAA 90 bp | AAGTCTGTAACAGGTTGCAGCTCAGGTAGAGACCATGCACAGCATTaGATTATTCAAAACAGCAGGAACACACAGGCTGAAGTGAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: KSVTGCSSGRDHAQH*IIQNSRNTQAEVSG Trigger: ACCACTCACTTCAGCCTGTGTGTTCCTGCTGTTTTGAATAATCAAATGCTGTGCATGGTCTCTACCTGAGCTGCAACCTGTTACAGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR TCA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCCAACTGCAAAGTGACTaGGACATGGCTTGCTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: CLSVKTPQLFHKALMASVQLQSD*DMACFR Trigger: TCTAAAGCAAGCCATGTCTCAGTCACTTTGCAGTTG...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTCAGGAACACACAGGCTaGAGTGAGTGGTCAAATAGG | + |
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Preference number: 2 (lower is better) Translates to: LVSILDTRQNSLFKVAPPQEHTG*SEWSNR Trigger: CCTATTTGACCACTCACTTCAGCCTGTGTGTTCCTG...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTGCAGTTGTCAGCATGTaGCACCAGGGAACATGGAAA | + |
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Preference number: 2 (lower is better) Translates to: LVSILDTRQNSLFKVAPPAVVSM*HQGTWK Trigger: TTTCCATGTTCCCTGGTGCCACATGCTGACAACTGC...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTGTATCAGTGGGCAGCTaGTATACCACCACTATGGAA | + |
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Preference number: 2 (lower is better) Translates to: LVSILDTRQNSLFKVAPPVSVGS*YTTTME Trigger: TTCCATAGTGGTGGTATATCAGCTGCCCACTGATAC...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR GCA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTGAGCCTTCTGTTGCTTaGTGTCTTATCGCTTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: HTLVSILDTRQNSLFKVAEPSVA*CLIAWW Trigger: CCACCAAGCGATAAGACAGCAAGCAACAGAAGGCTC...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR GCA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCAGGAAATCATGCATATaGATTTACAGTCCATGTGAG | + |
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Preference number: 2 (lower is better) Translates to: CLSVKTPQLFHKALMASVRKSCI*IYSPCE Trigger: CTCACATGGACTGTAAATGCATATGCATGATTTCCT...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTTGTCTTATCGCTTGGTaGCCATCTGGTGGTGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: LVSILDTRQNSLFKVAPPCLIAW*PSGGVS Trigger: TGAAACACCACCAGATGGCCACCAAGCGATAAGACA...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR TCA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTTTGGCAACTGCAAAGTaGCTGAGACATGGCTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: HTLVSILDTRQNSLFKVALATAK*LRHGLL Trigger: AAGCAAGCCATGTCTCAGTCACTTTGCAGTTGCCAA...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR CCA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCTCATTCATTAATAACTaGGTCAGACCATTTGCCATA | + |
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Preference number: 2 (lower is better) Translates to: CLSVKTPQLFHKALMASVSFINN*VRPFAI Trigger: TATGGCAAATGGTCTGACCCAGTTATTAATGAATGA...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR TCA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCATACCAAAGTGTCTTaGTCCACAGCGCACCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: HTLVSILDTRQNSLFKVAHTKVS*STAHLF Trigger: AAAAAGGTGCGCTGTGGATCAAGACACTTTGGTATG...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR CCA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCGCTTGGTGGCCATCTaGTGGTGTTTCATATTGAAT | + |
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Preference number: 2 (lower is better) Translates to: HTLVSILDTRQNSLFKVARLVAI*WCFILN Trigger: ATTCAATATGAAACACCACCAGATGGCCACCAAGCG...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTGGTGGTGTTTCATATTaGATGAAAGATGCTGCACTT | + |
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Preference number: 2 (lower is better) Translates to: LVSILDTRQNSLFKVAPPGGVSY*MKDAAL Trigger: AAGTGCAGCATCTTTCATTCAATATGAAACACCACC...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTACCATGCACAGCATTTaGTTATTCAAAACAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LVSILDTRQNSLFKVAPPTMHSI*LFKTAG Trigger: TCCTGCTGTTTTGAATAATCAAATGCTGTGCATGGT...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR CCA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTATGGAATATTCTAACTaGAGACTGCAGTTGTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: HTLVSILDTRQNSLFKVAMEYSN*RLQLSA Trigger: TGCTGACAACTGCAGTCTCCAGTTAGAATATTCCAT...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR TCA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTATTTGCCATAAGCAATaGCTTTACATAGTAAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: HTLVSILDTRQNSLFKVAICHKQ*LYIVRP Trigger: TGGCCTTACTATGTAAAGTCATTGCTTATGGCAAAT...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR GCA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTGTAATGAAGCACACCTaGTATGTGTTGTTTATCAGT | + |
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Preference number: 2 (lower is better) Translates to: HTLVSILDTRQNSLFKVAVMKHT*YVLFIS Trigger: ACTGATAAACAACACATAGCAGGTGTGCTTCATTAC...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR CCA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTATGAAAATATGTTTGTaGAGGACAATGATGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: HTLVSILDTRQNSLFKVAMKICL*RTMMEA Trigger: AGCCTCCATCATTGTCCTCCACAAACATATTTTCAT...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR CAA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCAACTGGAGACTGCAGTaGTCAGCATGTGGCACCAGG | + |
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Preference number: 3 (lower is better) Translates to: CLSVKTPQLFHKALMASVNWRLQ*SACGTR Trigger: CCTGGTGCCACATGCTGACAACTGCAGTCTCCAGTT...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR TCA 72 bp | CAGGTTGCAGCTCAGGTAGAGACCATGCACAGCATTTaGTTATTCAAAACAGCAGGAACACACAGGCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: QVAAQVETMHSI*LFKTAGTHRLK Trigger: CTTCAGCCTGTGTGTTCCTGCTGTTTTGAATAATCAAATGCTGTGCATGGTCTCTACCTGAGCTGCAACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR TCA 72 bp | AGCGCACCTTTTTCCAAAGGCGTATCAGTGGGCAGCTaGTATACCACCACTATGGAATATTCTAACTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SAPFSKGVSVGS*YTTTMEYSNWR Trigger: TCTCCAGTTAGAATATTCCATAGTGGTGGTATATCAGCTGCCCACTGATACGCCTTTGGAAAAAGGTGCGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR CCA 72 bp | AAGGCGTATCAGTGGGCAGCTGATATACCACCACTATaGAATATTCTAACTGGAGACTGCAGTTGTCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: KAYQWAADIPPL*NILTGDCSCQH Trigger: ATGCTGACAACTGCAGTCTCCAGTTAGAATATTCCATAGTGGTGGTATATCAGCTGCCCACTGATACGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR CCA 72 bp | TTCTGTTGCTTGCTGTCTTATCGCTTGGTGGCCATCTaGTGGTGTTTCATATTGAATGAAAGATGCTGCACT | + |
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Preference number: 3 (lower is better) Translates to: FCCLLSYRLVAI*WCFILNERCCT Trigger: AGTGCAGCATCTTTCATTCAATATGAAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCAACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR CAA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTGCTGGGAGCCTTCTGTaGCTTGCTGTCTTATCGCTT | + |
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Preference number: 3 (lower is better) Translates to: HTLVSILDTRQNSLFKVAAGSLL*LAVLSL Trigger: AAGCGATAAGACAGCAAGCAACAGAAGGCTCCCAGC...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR CAA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCGCGAAAGCATTACCATaGATATCTAAAGCTCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: CLSVKTPQLFHKALMASVAKALP*ISKALP Trigger: AGGAAGAGCTTTAGATATCAATGGTAATGCTTTCGC...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR GCA 72 bp | CCTTGGCAGATACATATATTTGTAATGAAGCACACCTaGTATGTGTTGTTTATCAGTGAAAACACCCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: PWQIHIFVMKHT*YVLFISENTPA Trigger: AGCTGGGGTGTTTTCACTGATAAACAACACATAGCAGGTGTGCTTCATTACAAATATATGTATCTGCCAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR CAA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTTGGTGGTGTTTCATATaGAATGAAAGATGCTGCACT | + |
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Preference number: 3 (lower is better) Translates to: HTLVSILDTRQNSLFKVAWWCFI*NERCCT Trigger: AGTGCAGCATCTTTCATTCAATATGAAACACCACCA...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| 3UTR-3UTR CAA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTCCTCTACACAGATCCTaGGTTTATCTTTTAATGTGT | + |
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Preference number: 3 (lower is better) Translates to: LVSILDTRQNSLFKVAPPPLHRS*VYLLMC Trigger: ACACATTAAAAGATAAACCAAGGATCTGTGTAGAGG...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS-3UTR CCA 90 bp | GGGAGCCTTCTGTTGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTAAGCTCTTGATGCGGTaGTTCTCCAAGCCGGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: GSLLLLAVLSLGGHLVVFKLLMR*FSKPGF Trigger: GAACCCCGGCTTGGAGAACCACCGCATCAAGAGCTT...AAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCAACAGAAGGCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS-3UTR CCA 90 bp | GGGAGCCTTCTGTTGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTTGTCTCCATAGGCGGTaGGGGGTCTTTATTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GSLLLLAVLSLGGHLVVFCLHRR*GVFIPA Trigger: TGCAGGAATAAAGACCCCCCACCGCCTATGGAGACA...AAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCAACAGAAGGCTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS-3UTR TCA 90 bp | GGGAGCCTTCTGTTGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTCTGCAGTTTGAACTTTaGCTTCCTGGTGGCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GSLLLLAVLSLGGHLVVFLQFEL*LPGGSE Trigger: TTCTGAGCCACCAGGAAGTCAAAGTTCAAACTGCAG...AAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCAACAGAAGGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS-3UTR TCA 90 bp | TGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTCATATTGAATGAACCCGTCTGTCAAGTATaGCAGCGCCCAAACAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: CLLSYRLVAIWWCFILNEPVCQV*QRPNSV Trigger: GACACTGTTTGGGCGCTGTCATACTTGACAGACGGG...TTCATTCAATATGAAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS-3UTR CCA 90 bp | GGGAGCCTTCTGTTGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTTGCACAGCACTCAACTaGACTACAGGATTATCACTT | + |
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Preference number: 4 (lower is better) Translates to: GSLLLLAVLSLGGHLVVFCTALN*TTGLSL Trigger: AAGTGATAATCCTGTAGTCCAGTTGAGTGCTGTGCA...AAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCAACAGAAGGCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS-3UTR GCA 90 bp | TGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTCATATTGAATGAAAGAACCACCTGGGTCTaGTCATCAGTGCCAGTCACT | + |
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Preference number: 4 (lower is better) Translates to: CLLSYRLVAIWWCFILNERTTWV*SSVPVT Trigger: AGTGACTGGCACTGATGAGCAGACCCAGGTGGTTCT...TTCATTCAATATGAAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS-3UTR GCA 90 bp | GGGAGCCTTCTGTTGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTGGTGGTATTACGTTCTaGTGTACAAGGTATTCAACT | + |
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Preference number: 4 (lower is better) Translates to: GSLLLLAVLSLGGHLVVFGGITF*CTRYST Trigger: AGTTGAATACCTTGTACAGCAGAACGTAATACCACC...AAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCAACAGAAGGCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS-3UTR TCA 90 bp | TGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTCATATTGAATGAACTGAGTGCTGCAGTTTaGACTTTGACTTCCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: CLLSYRLVAIWWCFILNELSAAV*TLTSWW Trigger: CCACCAGGAAGTCAAAGTTCAAACTGCAGCACTCAG...TTCATTCAATATGAAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS-3UTR GCA 90 bp | TGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTCATATTGAATGAAAGTTTCCTTGCTGCCTaGACAGCACTCAACTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: CLLSYRLVAIWWCFILNESFLAA*TALNWT Trigger: AGTCCAGTTGAGTGCTGTGCAGGCAGCAAGGAAACT...TTCATTCAATATGAAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR GCA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCCCCAACCGCTCTGAGTaGTGCAGTTTGAACTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CLSVKTPQLFHKALMASVPNRSE*CSLNFD Trigger: GTCAAAGTTCAAACTGCAGCACTCAGAGCGGTTGGG...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCTTTCTCTTTTGGGTGTaGCAAGAGGTTTGGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLSVKTPQLFHKALMASVFLFWV*QEVWEV Trigger: CACTTCCCAAACCTCTTGTCACACCCAAAAGAGAAA...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR GCA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCAACAGCTTGAGTCTGTaGAGAAGTTCCCGATGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: CLSVKTPQLFHKALMASVNSLSL*RSSRCY Trigger: ATAGCATCGGGAACTTCTGCACAGACTCAAGCTGTT...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR GCA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCAACCGCTCTGAGTGCTaGAGTTTGAACTTTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLSVKTPQLFHKALMASVNRSEC*SLNFDF Trigger: GAAGTCAAAGTTCAAACTGCAGCACTCAGAGCGGTT...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| 3UTR CAA 72 bp | ACCACCACTATGGAATATTCTAACTGGAGACTGCAGTaGTCAGCATGTGGCACCAGGGAACATGGAAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: TTTMEYSNWRLQ*SACGTREHGKY Trigger: ATATTTTCCATGTTCCCTGGTGCCACATGCTGACAACTGCAGTCTCCAGTTAGAATATTCCATAGTGGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR TCA 90 bp | TGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTCATATTGAATGAAGAAGGGTACAACCCCTaGATCAATAACCATCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: CLLSYRLVAIWWCFILNEEGYNP*INNHLY Trigger: ATACAGATGGTTATTGATTCAGGGGTTGTACCCTTC...TTCATTCAATATGAAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR GCA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCATAACCATCTGTATTTaGTCATTTCCCCCGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLSVKTPQLFHKALMASVITICI*SFPPSV Trigger: GACAGACGGGGGAAATGAGCAAATACAGATGGTTAT...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTACTTTGACTTCCTGGTaGCTCAGAAGGGGTACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVSILDTRQNSLFKVAPPTLTSW*LRRGTR Trigger: CCTCGTACCCCTTCTGAGCCACCAGGAAGTCAAAGT...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR TCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTGACTGTACAACAGCTTaGGTCTGTGCAGAAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSILDTRQNSLFKVAPPDCTTA*VCAEVP Trigger: GGGAACTTCTGCACAGACTCAAGCTGTTGTACAGTC...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR TCA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTGCTGGCAAAATCTCCTaGACTGTCTCCATAGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HTLVSILDTRQNSLFKVAAGKIS*TVSIGG Trigger: ACCGCCTATGGAGACAGTTCAGGAGATTTTGCCAGC...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCACAAGGTATTCAACTTaGTCTTTTCTGCCACTTATC | + |
|
Preference number: 4 (lower is better) Translates to: CLSVKTPQLFHKALMASVTRYST*SFLPLI Trigger: GATAAGTGGCAGAAAAGATCAAGTTGAATACCTTGT...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTAAGAGGTTTGGGAAGTaGGACAGGACATCACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVSILDTRQNSLFKVAPPKRFGK*DRTSQL Trigger: CAACTGTGATGTCCTGTCCCACTTCCCAAACCTCTT...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTCATATTGAATGAACTTTTGTTTGAAGGTTaGCTGTTGGGTCAAAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLSYRLVAIWWCFILNELLFEG*LLGQNC Trigger: ACAATTTTGACCCAACAGCCAACCTTCAAACAAAAG...TTCATTCAATATGAAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR TCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTACCACCTGCACCACTTaGGAATCTTTTACTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVSILDTRQNSLFKVAPPTTCTT*ESFTDS Trigger: ACTGTCAGTAAAAGATTCTCAAGTGGTGCAGGTGGT...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR TCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTCTCCACACTCTTCTATaGTCTCAGCTATTGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVSILDTRQNSLFKVAPPLHTLL*SQLLCL Trigger: CAAGCACAATAGCTGAGATCATAGAAGAGTGTGGAG...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTGAGCACACACAAAGCTaGCAAAATCTCCTGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVSILDTRQNSLFKVAPPEHTQS*QNLLNC Trigger: ACAGTTCAGGAGATTTTGCCAGCTTTGTGTGTGCTC...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTTCCTTGTGTTGCTTCTaGAATGAGGCTAGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVSILDTRQNSLFKVAPPSLCCF*NEARIF Trigger: GAAGATCCTAGCCTCATTCCAGAAGCAACACAAGGA...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR GCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTCTCAGCTATTGTGCTTaGTTCATCACCAGCCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: LVSILDTRQNSLFKVAPPLSYCA*FITSHY Trigger: ATAATGGCTGGTGATGAAGCAAGCACAATAGCTGAG...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTGAGTCGCAGAAAAAGTaGTACTGCATTAGACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LVSILDTRQNSLFKVAPPESQKK*YCIRLY Trigger: GTACAGTCTAATGCAGTACCACTTTTTCTGCGACTC...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR GCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTCAGAAAAAGTGGTACTaGATTAGACTGTACAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSILDTRQNSLFKVAPPQKKWY*IRLYNS Trigger: GCTGTTGTACAGTCTAATGCAGTACCACTTTTTCTG...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTTGCCTGCTGTTATATTaGAAAGGAACCATACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVSILDTRQNSLFKVAPPCLLLY*KGTILL Trigger: AAGCAGTATGGTTCCTTTCCAATATAACAGCAGGCA...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR TCA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTTTAAATTCTTTTGTTTaGAGGTTGGCTGTTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVSILDTRQNSLFKVAPPLNSFV*RLAVGS Trigger: TGACCCAACAGCCAACCTTCAAACAAAAGAATTTAA...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR GCA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTTTGCTGCTGATTGCCTaGTGTTATATTGGAAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HTLVSILDTRQNSLFKVALLLIA*CYIGKE Trigger: TTCCTTTCCAATATAACAGCAGGCAATCAGCAGCAA...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR GCA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTGAACTTGCTGCTGATTaGCTGCTGTTATATTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTLVSILDTRQNSLFKVAELAAD*LLLYWK Trigger: TTTCCAATATAACAGCAGGCAATCAGCAGCAAGTTC...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CCA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTTTGAAGGTTGGCTGTTaGGTCAAAATTGTAAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: HTLVSILDTRQNSLFKVALKVGC*VKIVST Trigger: GGTACTTACAATTTTGACCCAACAGCCAACCTTCAA...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| 3UTR CAA 72 bp | ATACATATATTTGTAATGAAGCACACCTGCTATGTGTaGTTTATCAGTGAAAACACCCCAGCTGTTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: IHIFVMKHTCYV*FISENTPAVSQ Trigger: TTGTGAAACAGCTGGGGTGTTTTCACTGATAAACAACACATAGCAGGTGTGCTTCATTACAAATATATGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR GCA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTGGAAAGGAACCATACTaGTTCCTTATTTATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTLVSILDTRQNSLFKVAGKEPY*FLIYFL Trigger: GAGAAAATAAATAAGGAAGCAGTATGGTTCCTTTCC...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CAA 90 bp | GGGAGCCTTCTGTTGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTGACAGGACATCACAGTaGAGAACCACCTGGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSLLLLAVLSLGGHLVVFDRTSQ*RTTWVC Trigger: GCAGACCCAGGTGGTTCTCAACTGTGATGTCCTGTC...AAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCAACAGAAGGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS GCA 90 bp | TTTGGGAAGTGGGACAGGACATCACAGTTGAGAACCACCTGGGTCTaGTCATCAGTGCCAGTCACTATGTTCCCAACCGCTCTGAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FGKWDRTSQLRTTWV*SSVPVTMFPTALSA Trigger: AGCACTCAGAGCGGTTGGGAACATAGTGACTGGCACTGATGAGCAGACCCAGGTGGTTCTCAACTGTGATGTCCTGTCCCACTTCCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCTCGCGGCCCTTGTTCTaGAAGCTCTTGATGCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CLSVKTPQLFHKALMASVSRPLF*KLLMRW Trigger: CCACCGCATCAAGAGCTTCAAGAACAAGGGCCGCGA...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CAA 90 bp | GGGAGCCTTCTGTTGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTTTATTCCTGCAGAGATaGACAATGACCCATGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: GSLLLLAVLSLGGHLVVFLFLQR*TMTHVT Trigger: CGTCACATGGGTCATTGTCAATCTCTGCAGGAATAA...AAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCAACAGAAGGCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CAA 90 bp | GGGAGCCTTCTGTTGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTTTTGAAGGTTGGCTGTaGGGTCAAAATTGTAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GSLLLLAVLSLGGHLVVFFEGWL*GQNCKY Trigger: GTACTTACAATTTTGACCCAACAGCCAACCTTCAAA...AAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCAACAGAAGGCTCCC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CAA 90 bp | TGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTCATATTGAATGAATGGATAATAGTTTCCTaGCTGCCTGCACAGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: CLLSYRLVAIWWCFILNEWIIVS*LPAQHS Trigger: TGAGTGCTGTGCAGGCAGCAAGGAAACTATTATCCA...TTCATTCAATATGAAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CAA 90 bp | TGCTTGCTGTCTTATCGCTTGGTGGCCATCTGGTGGTGTTTCATATTGAATGAAAAGGACAGAAGAGGTTaGACAACTCCCAGTGATATG | + |
|
Preference number: 5 (lower is better) Translates to: CLLSYRLVAIWWCFILNEKDRRG*TTPSDM Trigger: CATATCACTGGGAGTTGTCAAACCTCTTCTGTCCTT...TTCATTCAATATGAAACACCACCAGATGGCCACCAAGCGATAAGACAGCAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCTATTACAGCTTGAACTaGCTGCTGATTGCCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CLSVKTPQLFHKALMASVYYSLN*LLIACC Trigger: ACAGCAGGCAATCAGCAGCAAGTTCAAGCTGTAATA...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CAA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTTCCACATCGCGGCCCTaGTTCTTGAAGCTCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LVSILDTRQNSLFKVAPPSTSRP*FLKLLM Trigger: CATCAAGAGCTTCAAGAACAAGGGCCGCGATGTGGA...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTATCAGTGAAAACACCCCAGCTGTTTCACAAAGCTCTGATGGCATCTGTCAATAACCATCTGTATTaGCTCATTTCCCCCGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CLSVKTPQLFHKALMASVNNHLY*LISPVC Trigger: ACAGACGGGGGAAATGAGCAAATACAGATGGTTATT...GACAGATGCCATCAGAGCTTTGTGAAACAGCTGGGGTGTTTTCACTGATAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CAA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTGGTGTGACAAGAGGTTaGGGAAGTGGGACAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: HTLVSILDTRQNSLFKVAGVTRG*GSGTGH Trigger: ATGTCCTGTCCCACTTCCCAAACCTCTTGTCACACC...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CAA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTAGACTGTACAACAGCTaGAGTCTGTGCAGAAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HTLVSILDTRQNSLFKVARLYNS*SLCRSS Trigger: GGAACTTCTGCACAGACTCAAGCTGTTGTACAGTCT...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CAA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTTTGCCTGCTGTTATATaGGAAAGGAACCATACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LVSILDTRQNSLFKVAPPLPAVI*ERNHTA Trigger: AGCAGTATGGTTCCTTTCCAATATAACAGCAGGCAA...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CAA 90 bp | CATACGCTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTAGCATCTATTACAGCTaGAACTTGCTGCTGATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HTLVSILDTRQNSLFKVASIYYS*NLLLIA Trigger: GGCAATCAGCAGCAAGTTCAAGCTGTAATAGATGCT...AGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAGCGTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS TCA 90 bp | ATTATCAGGATGTTTTTAAGACCATCTAGAACCACCTGCACCACTTaGGAATCTTTTACTGACAGTAAGTTACAGAATGGTGGTATTACG | + |
|
Preference number: 5 (lower is better) Translates to: IIRMFLRPSRTTCTT*ESFTDSKLQNGGIT Trigger: CGTAATACCACCATTCTGTAACTTACTGTCAGTAAAAGATTCTCAAGTGGTGCAGGTGGTTCTAGATGGTCTTAAAAACATCCTGATAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CAA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTTTATTAGGTCATCAATaGGTGGATTTCTGTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVSILDTRQNSLFKVAPPLLGHQ*VDFCHW Trigger: CCAGTGACAGAAATCCACCAATTGATGACCTAATAA...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS-3UTR CAA 90 bp | CTTGTATCCATTTTAGATACAAGACAAAACTCACTCTTTAAAGTGGCTCCACCTATTAAATTCTTTTGTTaGAAGGTTGGCTGTTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVSILDTRQNSLFKVAPPIKFFC*KVGCWV Trigger: GACCCAACAGCCAACCTTCAAACAAAAGAATTTAAT...AGGTGGAGCCACTTTAAAGAGTGAGTTTTGTCTTGTATCTAAAATGGATACAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
||
| CDS CAA 72 bp | TGTCTTCGCATCGTCTCCACATCGCGGCCCTTGTTCTaGAAGCTCTTGATGCGGTGGTTCTCCAAGCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CLRIVSTSRPLF*KLLMRWFSKPG Trigger: CCCCGGCTTGGAGAACCACCGCATCAAGAGCTTCAAGAACAAGGGCCGCGATGTGGAGACGATGCGAAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS CAA 90 bp | TCATTTCTGTGTCTTCGCATCGTCTCCACATCGCGGCCCTTGTTCTaGAAGCTCTTGATGCGGTGGTTCTCCAAGCCGGGGTTCTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SFLCLRIVSTSRPLF*KLLMRWFSKPGFSA Trigger: GGCCGAGAACCCCGGCTTGGAGAACCACCGCATCAAGAGCTTCAAGAACAAGGGCCGCGATGTGGAGACGATGCGAAGACACAGAAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS GCA 72 bp | TGGGACAGGACATCACAGTTGAGAACCACCTGGGTCTaGTCATCAGTGCCAGTCACTATGTTCCCAACCGCT | + |
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Preference number: 6 (lower is better) Translates to: WDRTSQLRTTWV*SSVPVTMFPTA Trigger: AGCGGTTGGGAACATAGTGACTGGCACTGATGAGCAGACCCAGGTGGTTCTCAACTGTGATGTCCTGTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS CAA 72 bp | TTTCTGTGTCTTCGCATCGTCTCCACATCGCGGCCCTaGTTCTTGAAGCTCTTGATGCGGTGGTTCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: FLCLRIVSTSRP*FLKLLMRWFSK Trigger: CTTGGAGAACCACCGCATCAAGAGCTTCAAGAACAAGGGCCGCGATGTGGAGACGATGCGAAGACACAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS TCA 72 bp | GTGGCTCAGAAGGGGTACGAGGAAGGGTACAACCCCTaGATCAATAACCATCTGTATTTGCTCATTTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: VAQKGYEEGYNP*INNHLYLLISP Trigger: GGGGGAAATGAGCAAATACAGATGGTTATTGATTCAGGGGTTGTACCCTTCCTCGTACCCCTTCTGAGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS TCA 72 bp | CAGTGTCTACAAGAATATTTATGTCCGTATGGTAGATaGGCACACACAAAGCTGGCAAAATCTCCTGAACTG | + |
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Preference number: 6 (lower is better) Translates to: QCLQEYLCPYGR*AHTKLAKSPEL Trigger: CAGTTCAGGAGATTTTGCCAGCTTTGTGTGTGCTCATCTACCATACGGACATAAATATTCTTGTAGACACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS CAA 72 bp | CAGAAAAAGTGGTACTGCATTAGACTGTACAACAGCTaGAGTCTGTGCAGAAGTTCCCGATGCTATATTAGT | + |
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Preference number: 6 (lower is better) Translates to: QKKWYCIRLYNS*SLCRSSRCYIS Trigger: ACTAATATAGCATCGGGAACTTCTGCACAGACTCAAGCTGTTGTACAGTCTAATGCAGTACCACTTTTTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS TCA 72 bp | ATGTTTTTAAGACCATCTAGAACCACCTGCACCACTTaGGAATCTTTTACTGACAGTAAGTTACAGAATGGT | + |
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Preference number: 6 (lower is better) Translates to: MFLRPSRTTCTT*ESFTDSKLQNG Trigger: ACCATTCTGTAACTTACTGTCAGTAAAAGATTCTCAAGTGGTGCAGGTGGTTCTAGATGGTCTTAAAAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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| CDS CCA 72 bp | TTAGAAATTAAATTCTTTTGTTTGAAGGTTGGCTGTTaGGTCAAAATTGTAAGTACCTCCTTGTGTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LEIKFFCLKVGC*VKIVSTSLCCF Trigger: GAAGCAACACAAGGAGGTACTTACAATTTTGACCCAACAGCCAACCTTCAAACAAAAGAATTTAATTTCTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022496.9 |
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