Pregenerated sensors for KNTC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029414Ensembl transcript IDs: ENSMUST00000031366.12, ENSMUST00000197265.2, ENSMUST00000198841.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGATCTCACAGGGAGCTGCATCTGCTGGCACAGGCTTCCCACAATaGTTTGAATACTCATTTATCAACGCTGATGCTTCATCTACACTG | + |
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Preference number: 1 (lower is better) Translates to: RISQGAASAGTGFPQ*FEYSFINADASSTL Trigger: CAGTGTAGATGAAGCATCAGCGTTGATAAATGAGTATTCAAAGCATTGTGGGAAGCCTGTGCCAGCAGATGCAGCTCCCTGTGAGATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197265.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGGGAGCTGCATCTGCTGGCACAGGCTTCCCACAATGCTTTGAATACTCATATATGTTCTTCTATCTaGTGTAAAATGATCCGAGCA | + |
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Preference number: 2 (lower is better) Translates to: HRELHLLAQASHNALNTHICSSI*CKMIRA Trigger: TGCTCGGATCATTTTACAGCAGATAGAAGAACATAT...ATGAGTATTCAAAGCATTGTGGGAAGCCTGTGCCAGCAGATGCAGCTCCCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197265.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGCCGGTGTTTATCACGTGGCATTTCAACAACTGAAAATACTTTGTCTTTGCACCAGACTTCCAATCTaGTGTGAAAACCCTGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: VAGVYHVAFQQLKILCLCTRLPI*CENPAS Trigger: GCTAGCAGGGTTTTCACATCAGATTGGAAGTCTGGT...GCAAAGACAAAGTATTTTCAGTTGTTGAAATGCCACGTGATAAACACCGGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197265.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCTGCTGGCACAGGCTTCCCACAATGCTTTGAATACTCATTTATCAACGCTTGGCATTTCAACAACTaGAAATACTTTGTCTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: ASAGTGFPQCFEYSFINAWHFNN*KYFVFA Trigger: GGCAAAGACAAAGTATTTTCAGTTGTTGAAATGCCA...AGCGTTGATAAATGAGTATTCAAAGCATTGTGGGAAGCCTGTGCCAGCAGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197265.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTTGAATACTCATTTATCAACGCTGATGCTTCATCTACACTGAAGTCATTTGAAAACCCTGCTAGCTaGCCAGTGTTCATATGTTCT | + |
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Preference number: 2 (lower is better) Translates to: CFEYSFINADASSTLKSFENPAS*PVFICS Trigger: AGAACATATGAACACTGGCCAGCTAGCAGGGTTTTC...AAATGACTTCAGTGTAGATGAAGCATCAGCGTTGATAAATGAGTATTCAAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197265.2 |
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| 3UTR TCA 72 bp | ATCTCAGAGTCCCATGTCATGTATAAAACCCGAGGTTaGGCTGTACTAACCATTAGCCAATCACAAGGCACC | + |
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Preference number: 3 (lower is better) Translates to: ISESHVMYKTRG*AVLTISQSQGT Trigger: GGTGCCTTGTGATTGGCTAATGGTTAGTACAGCTCAACCTCGGGTTTTATACATGACATGGGACTCTGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198841.2 |
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| 3UTR GCA 72 bp | ACTTGTTTGTTTTACTATGATCCACCAAGAAATGTCTaGAGGATCTCACAGGGAGCTGCATCTGCTGGCACA | + |
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Preference number: 3 (lower is better) Translates to: TCLFYYDPPRNV*RISQGAASAGT Trigger: TGTGCCAGCAGATGCAGCTCCCTGTGAGATCCTGCAGACATTTCTTGGTGGATCATAGTAAAACAAACAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197265.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTTGTTTTACTATGATCCACCAAGAAATGTCTGCAGGATCTCACAGGGAGCTGCTTCCCACAATGCTTaGAATACTCATTTATCAACG | + |
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Preference number: 3 (lower is better) Translates to: CLFYYDPPRNVCRISQGAASHNA*NTHLST Trigger: CGTTGATAAATGAGTATTCAAAGCATTGTGGGAAGC...AGCTCCCTGTGAGATCCTGCAGACATTTCTTGGTGGATCATAGTAAAACAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197265.2 |
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| CDS-3UTR TCA 90 bp | GAAATGTCTGCAGGATCTCACAGGGAGCTGCATCTGCTGGCACAGGCTTCCCACGCTGCCACGCTTTGCTaGAGTAGGGCACCTGCCATA | + |
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Preference number: 4 (lower is better) Translates to: EMSAGSHRELHLLAQASHAATLC*SRAPAI Trigger: TATGGCAGGTGCCCTACTTCAGCAAAGCGTGGCAGC...GTGGGAAGCCTGTGCCAGCAGATGCAGCTCCCTGTGAGATCCTGCAGACATTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197265.2 |
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| CDS-3UTR CCA 90 bp | CACAGGGAGCTGCATCTGCTGGCACAGGCTTCCCACAATGCTTTGAATACTCATGAGAGCAGAGGGATCTaGATCACGCGCTGCCACGCT | + |
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Preference number: 4 (lower is better) Translates to: HRELHLLAQASHNALNTHESRGI*ITRCHA Trigger: AGCGTGGCAGCGCGTGATCCAGATCCCTCTGCTCTC...ATGAGTATTCAAAGCATTGTGGGAAGCCTGTGCCAGCAGATGCAGCTCCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197265.2 |
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| CDS-3UTR CCA 90 bp | GAAATGTCTGCAGGATCTCACAGGGAGCTGCATCTGCTGGCACAGGCTTCCCACACTGCCATAGGTTCGTaGCTGTGGTTCTTCCACAAG | + |
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Preference number: 4 (lower is better) Translates to: EMSAGSHRELHLLAQASHTAIGS*LWFFHK Trigger: CTTGTGGAAGAACCACAGCCACGAACCTATGGCAGT...GTGGGAAGCCTGTGCCAGCAGATGCAGCTCCCTGTGAGATCCTGCAGACATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197265.2 |
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| CDS-3UTR TCA 90 bp | TGTTTGTTTTACTATGATCCACCAAGAAATGTCTGCAGGATCTCACAGGGAGCTCAGCAGTCTGCTAACTaGCTGGGTCTTAAAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: CLFYYDPPRNVCRISQGAQQSAN*LGLKGQ Trigger: CTGTCCTTTAAGACCCAGTCAGTTAGCAGACTGCTG...AGCTCCCTGTGAGATCCTGCAGACATTTCTTGGTGGATCATAGTAAAACAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197265.2 |
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| CDS-3UTR CCA 90 bp | TGCTTTGAATACTCATTTATCAACGCTGATGCTTCATCTACACTGAAGTCATTTAGTCTGCTAACTGACTaGGTCTTAAAGGACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: CFEYSFINADASSTLKSFSLLTD*VLKDRK Trigger: CTTCCTGTCCTTTAAGACCCAGTCAGTTAGCAGACT...AAATGACTTCAGTGTAGATGAAGCATCAGCGTTGATAAATGAGTATTCAAAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197265.2 |
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| CDS TCA 90 bp | CTCCTGTTCAGACACCTGCAGGGCCAGTGCCTGTCGGTGCAGCTTTaGCTTGATGCTCAGGTGTGTCCCCCTAGCCGGGGTGGGCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: LLFRHLQGQCLSVQL*LDAQVCPPSRGGPG Trigger: CCCGGGCCCACCCCGGCTAGGGGGACACACCTGAGCATCAAGTCAAAGCTGCACCGACAGGCACTGGCCCTGCAGGTGTCTGAACAGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 90 bp | GCCCACTCGGGGTTGACGATGGACAGGAGGTACGACTCCAGCGTCTaGATGAGCTTATCCACTTCCTTGCTCATCAGGGTGGAGGACCTG | + |
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Preference number: 5 (lower is better) Translates to: AHSGLTMDRRYDSSV*MSLSTSLLIRVEDL Trigger: CAGGTCCTCCACCCTGATGAGCAAGGAAGTGGATAAGCTCATGCAGACGCTGGAGTCGTACCTCCTGTCCATCGTCAACCCCGAGTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | AGTAAAGGGACCAGCTCAGTGGCTTTCGCCAGGAGTTTGGAATGCTaGTGCTTTGTGGACTCCGGGGCAGCATCTCCCTGGCTCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SKGTSSVAFARSLEC*CFVDSGAASPWLWL Trigger: CAGCCAGAGCCAGGGAGATGCTGCCCCGGAGTCCACAAAGCATCAGCATTCCAAACTCCTGGCGAAAGCCACTGAGCTGGTCCCTTTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | TTCCTGATCGTTCAGCTTGTGGGCTATGAGCACGGCTTCCGTTCCTaGGAGCCGGACCTGGAGGCAGAGCTTCTTCTGCAAGGCTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: FLIVQLVGYEHGFRS*EPDLEAELLLQGFG Trigger: GCCAAAGCCTTGCAGAAGAAGCTCTGCCTCCAGGTCCGGCTCTCAGGAACGGAAGCCGTGCTCATAGCCCACAAGCTGAACGATCAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 90 bp | GGGGTGGTCCATTTCCAGGTGCTGTTTCACCAGCTGCTCCACGGCTaGACTCCAGGGAACCACCGCCTTGTACATTATCTTCAGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: GVVHFQVLFHQLLHG*TPGNHRLVHYLQHS Trigger: GCTGTGCTGAAGATAATGTACAAGGCGGTGGTTCCCTGGAGTGCAGCCGTGGAGCAGCTGGTGAAACAGCACCTGGAAATGGACCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | GCTCTGGGGCCGAGACCCTGTCGAACATGCGGAACACCACAGTGGTaGCATTTTCCTTCTCAAAGTCCGAGAGGGCCAGCTTGCAGTTGT | + |
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Preference number: 5 (lower is better) Translates to: ALGPRPCRTCGTPQW*HFPSQSPRGPACSC Trigger: ACAACTGCAAGCTGGCCCTCTCGGACTTTGAGAAGGAAAATGCCACCACTGTGGTGTTCCGCATGTTCGACAGGGTCTCGGCCCCAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | TCAGCTCTGGGGCCGAGACCCTGTCGAACATGCGGAACACCACAGTaGTGGCATTTTCCTTCTCAAAGTCCGAGAGGGCCAGCTTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: SALGPRPCRTCGTPQ*WHFPSQSPRGPACS Trigger: ACTGCAAGCTGGCCCTCTCGGACTTTGAGAAGGAAAATGCCACCACTGTGGTGTTCCGCATGTTCGACAGGGTCTCGGCCCCAGAGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | AGCTTGTGGGCTATGAGCACGGCTTCCGTTCCTGAGAGCCGGACCTaGAGGCAGAGCTTCTTCTGCAAGGCTTTGGCCTTTTCACACGTC | + |
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Preference number: 5 (lower is better) Translates to: SLWAMSTASVPESRT*RQSFFCKALAFSHV Trigger: GACGTGTGAAAAGGCCAAAGCCTTGCAGAAGAAGCTCTGCCTCCAGGTCCGGCTCTCAGGAACGGAAGCCGTGCTCATAGCCCACAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | GTGGCATGCGAGGTCATGGATCTCAGAAGGAAGGCTGAGTCCTCCTaGGGCCACCATTGGGACATCGTCAGCCAACATCTGACAGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: VACEVMDLRRKAESS*GHHWDIVSQHLTEL Trigger: AAGCTCTGTCAGATGTTGGCTGACGATGTCCCAATGGTGGCCCCAGGAGGACTCAGCCTTCCTTCTGAGATCCATGACCTCGCATGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | GCCGGTGGCAGAGTGATCATGTGCTCCAGCGCGTACTGGTATTCGTaGTCCACTGGCGGGGAGATCCTTCTGTATGACTTCAAGTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: AGGRVIMCSSAYWYS*STGGEILLYDFKCL Trigger: GAGACACTTGAAGTCATACAGAAGGATCTCCCCGCCAGTGGACCACGAATACCAGTACGCGCTGGAGCACATGATCACTCTGCCACCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | CAGAACTTCAAACTAGACATCTTGAAGGGGCCTTCTGGGACTTCCTaGGTGAGGCTGATGGCAATGGCGACAGCCCACTCGGGGTTGACG | + |
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Preference number: 5 (lower is better) Translates to: QNFKLDILKGPSGTS*VRLMAMATAHSGLT Trigger: CGTCAACCCCGAGTGGGCTGTCGCCATTGCCATCAGCCTCACCCAGGAAGTCCCAGAAGGCCCCTTCAAGATGTCTAGTTTGAAGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | TGTTCTTCAGTAAAGGGACCAGCTCAGTGGCTTTCGCCAGGAGTTTaGAATGCTGATGCTTTGTGGACTCCGGGGCAGCATCTCCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: CSSVKGPAQWLSPGV*NADALWTPGQHLPG Trigger: GCCAGGGAGATGCTGCCCCGGAGTCCACAAAGCATCAGCATTCCAAACTCCTGGCGAAAGCCACTGAGCTGGTCCCTTTACTGAAGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | GGACATTCAAGGATGGCGACGAGACTGTCACAGCAGTCTGCTAACTaGCTGGGTCTTAAAGGACAGGAAGCCGAGAGCAGAGGGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: GHSRMATRLSQQSAN*LGLKGQEAESRGIW Trigger: CCAGATCCCTCTGCTCTCGGCTTCCTGTCCTTTAAGACCCAGTCAGTTAGCAGACTGCTGTGACAGTCTCGTCGCCATCCTTGAATGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 90 bp | AACTTGACTTTGGGGTGGTCCATTTCCAGGTGCTGTTTCACCAGCTaGTCCACGGCTGCACTCCAGGGAACCACCGCCTTGTACATTATC | + |
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Preference number: 5 (lower is better) Translates to: NLTLGWSISRCCFTS*STAALQGTTALYII Trigger: GATAATGTACAAGGCGGTGGTTCCCTGGAGTGCAGCCGTGGAGCAGCTGGTGAAACAGCACCTGGAAATGGACCACCCCAAAGTCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 90 bp | AACATCCAGCAAATAATCTGGACTGCAGATGGTGACAGCGTGGCATaGGAGGTCATGGATCTCAGAAGGAAGGCTGAGTCCTCCTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: NIQQIIWTADGDSVA*EVMDLRRKAESSWG Trigger: GCCCCAGGAGGACTCAGCCTTCCTTCTGAGATCCATGACCTCGCATGCCACGCTGTCACCATCTGCAGTCCAGATTATTTGCTGGATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | CAAAGTCCGAGAGGGCCAGCTTGCAGTTGTATTTCCTATGCAGAATaGTCAGCTCCCGCAACTTGCTCACCAGTGTCCGTAACTGGCGGA | + |
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Preference number: 5 (lower is better) Translates to: QSPRGPACSCISYAE*SAPATCSPVSVTGG Trigger: TCCGCCAGTTACGGACACTGGTGAGCAAGTTGCGGGAGCTGATCATTCTGCATAGGAAATACAACTGCAAGCTGGCCCTCTCGGACTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | TCCCTATCACTCTTAAATATTCCTGATCGTTCAGCTTGTGGGCTATaGGCACGGCTTCCGTTCCTGAGAGCCGGACCTGGAGGCAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: SLSLLNIPDRSACGL*ARLPFLRAGPGGRA Trigger: AGCTCTGCCTCCAGGTCCGGCTCTCAGGAACGGAAGCCGTGCTCATAGCCCACAAGCTGAACGATCAGGAATATTTAAGAGTGATAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 90 bp | CAGGTAACAGATGAGGGAGAATCCGCTTCTGTCGTGAGAACAAACTaGTCTACGGGAAGAGAGGGCCAGTTCCACACAGGAGTGAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: QVTDEGESASVVRTN*STGREGQFHTGVRV Trigger: CACTCTCACTCCTGTGTGGAACTGGCCCTCTCTTCCCGTAGAGCAGTTTGTTCTCACGACAGAAGCGGATTCTCCCTCATCTGTTACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | GCACTTCATCCTCTTCCAGCTCAAAGAACTCCGATGCTTTCTCACTaGGCACCGTTGAGGGGCACAGCCATTTCTCCAACAACATGTCCC | + |
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Preference number: 5 (lower is better) Translates to: ALHPLPAQRTPMLSH*APLRGTAISPTTCP Trigger: GGGACATGTTGTTGGAGAAATGGCTGTGCCCCTCAACGGTGCCCAGTGAGAAAGCATCGGAGTTCTTTGAGCTGGAAGAGGATGAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | CTCACGATGAGGTGCGCTGGCTTCCCTATCACTCTTAAATATTCCTaGTCGTTCAGCTTGTGGGCTATGAGCACGGCTTCCGTTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LTMRCAGFPITLKYS*SFSLWAMSTASVPE Trigger: CTCAGGAACGGAAGCCGTGCTCATAGCCCACAAGCTGAACGATCAGGAATATTTAAGAGTGATAGGGAAGCCAGCGCACCTCATCGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | GGCAGGTCAGAGCAAAAGCGGGAAGGTCTAACTGGACGTACTGCTTaGCGACTCCCATCATGTCCAGGTCATCTGAAACTGGACATTCAA | + |
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Preference number: 5 (lower is better) Translates to: GRSEQKREGLTGRTA*RLPSCPGHLKLDIQ Trigger: TTGAATGTCCAGTTTCAGATGACCTGGACATGATGGGAGTCGCCAAGCAGTACGTCCAGTTAGACCTTCCCGCTTTTGCTCTGACCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | CGCGTACTGGTATTCGTGGTCCACTGGCGGGGAGATCCTTCTGTATaGCTTCAAGTGTCTCAGAAGATTCAGCGCCTGATTGATGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: RVLVFVVHWRGDPSV*LQVSQKIQRLIDVH Trigger: GTGAACATCAATCAGGCGCTGAATCTTCTGAGACACTTGAAGTCATACAGAAGGATCTCCCCGCCAGTGGACCACGAATACCAGTACGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | TCATCAGCTTCGCGATTAAGAGCAGGGTTGGCAGCGACTCTTCGCTaGGCTCTGAGGAGAGAATTTTCCAGAAGTTCTGTGCTGTGCCAA | + |
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Preference number: 5 (lower is better) Translates to: SSASRLRAGLAATLR*ALRREFSRSSVLCQ Trigger: TTGGCACAGCACAGAACTTCTGGAAAATTCTCTCCTCAGAGCTCAGCGAAGAGTCGCTGCCAACCCTGCTCTTAATCGCGAAGCTGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | AAAATTTCAAGGATGGCGACGAGACTGTCACAGCAGTCTGCTAACTaGCTGGGTCTTAAAGGACAGGAAGCCGAGAGCAGAGGGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: KISRMATRLSQQSAN*LGLKGQEAESRGIW Trigger: CCAGATCCCTCTGCTCTCGGCTTCCTGTCCTTTAAGACCCAGTCAGTTAGCAGACTGCTGTGACAGTCTCGTCGCCATCCTTGAAATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197265.2 |
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| CDS GCA 90 bp | TCCTTCTCAAAGTCCGAGAGGGCCAGCTTGCAGTTGTATTTCCTATaGAGAATGATCAGCTCCCGCAACTTGCTCACCAGTGTCCGTAAC | + |
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Preference number: 5 (lower is better) Translates to: SFSKSERASLQLYFL*RMISSRNLLTSVRN Trigger: GTTACGGACACTGGTGAGCAAGTTGCGGGAGCTGATCATTCTGCATAGGAAATACAACTGCAAGCTGGCCCTCTCGGACTTTGAGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 90 bp | AACTGTTTACTCAAGCTGATACTCATGACGTTTGACATAGAGTGCTaGAGGCAGGTACCAAAGGAGCCCACCACGAACCTCAGGGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: NCLLKLILMTFDIEC*RQVPKEPTTNLRAS Trigger: GCTAGCCCTGAGGTTCGTGGTGGGCTCCTTTGGTACCTGCCTGCAGCACTCTATGTCAAACGTCATGAGTATCAGCTTGAGTAAACAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | CGACTCCCATCATGTCCAGGTCATCTGAAACTGGACATTCAAGGATaGCGACGAGACTGTCACAGCAGTCTGCTAACTGACTGGGTCTTA | + |
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Preference number: 5 (lower is better) Translates to: RLPSCPGHLKLDIQG*RRDCHSSLLTDWVL Trigger: TAAGACCCAGTCAGTTAGCAGACTGCTGTGACAGTCTCGTCGCCATCCTTGAATGTCCAGTTTCAGATGACCTGGACATGATGGGAGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | GAACAAACTGCTCTACGGGAAGAGAGGGCCAGTTCCACACAGGAGTaGGAGTGTAAGCATCCCACAAGCTCAGCACATTATCAGTATCCA | + |
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Preference number: 5 (lower is better) Translates to: EQTALREERASSTQE*ECKHPTSSAHYQYP Trigger: TGGATACTGATAATGTGCTGAGCTTGTGGGATGCTTACACTCTCACTCCTGTGTGGAACTGGCCCTCTCTTCCCGTAGAGCAGTTTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 90 bp | AGTAACTGTTTACTCAAGCTGATACTCATGACGTTTGACATAGAGTaGTGCAGGCAGGTACCAAAGGAGCCCACCACGAACCTCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: SNCLLKLILMTFDIE*CRQVPKEPTTNLRA Trigger: AGCCCTGAGGTTCGTGGTGGGCTCCTTTGGTACCTGCCTGCAGCACTCTATGTCAAACGTCATGAGTATCAGCTTGAGTAAACAGTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | CTCAGTGAGGTCTTCTCAGAGGAGATCTTCCCAAGCAAGTCGGCTTaGTACAGTGCAGTCACGTTTTCTTTTCTTGAGCCAACACTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LSEVFSEEIFPSKSA*YSAVTFSFLEPTLR Trigger: CCTGAGTGTTGGCTCAAGAAAAGAAAACGTGACTGCACTGTACCAAGCCGACTTGCTTGGGAAGATCTCCTCTGAGAAGACCTCACTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | TGGAAGTTGCCGCTTCTCTCCCCCACAAAGAGAAACTTTCCTTCTTaGCACAGGCCGACCACATCCACGTCAGTATCGAAGATAAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: WKLPLLSPTKRNFPS*HRPTTSTSVSKIRN Trigger: GTTTCTTATCTTCGATACTGACGTGGATGTGGTCGGCCTGTGTCAAGAAGGAAAGTTTCTCTTTGTGGGGGAGAGAAGCGGCAACTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | CAGAGCTTCTTCTGCAAGGCTTTGGCCTTTTCACACGTCTCATCCTaGGGTGGGATGTTTTGTAGCCATCTCTCAGCTAAATACAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: QSFFCKALAFSHVSS*GGMFCSHLSAKYRQ Trigger: CTGCCTGTATTTAGCTGAGAGATGGCTACAAAACATCCCACCTCAGGATGAGACGTGTGAAAAGGCCAAAGCCTTGCAGAAGAAGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | AAGCAAAGCTCTGCAACCAATCGTACTGCCATAGGTTCGTGGCTGTaGTTCTTCCACAAGCCCTTAATCATGCCTTCTTTGGGACTGTTG | + |
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Preference number: 5 (lower is better) Translates to: KQSSATNRTAIGSWL*FFHKPLIMPSLGLL Trigger: CAACAGTCCCAAAGAAGGCATGATTAAGGGCTTGTGGAAGAACCACAGCCACGAACCTATGGCAGTACGATTGGTTGCAGAGCTTTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | TTTTGCTTTCTGCAGGGGGCATCACTGATGAGATCAATTCATAGATaGCAGGCAGCACCACCTGGGACTCGAGAACAATTCCATCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: FCFLQGASLMRSIHR*QAAPPGTREQFHLH Trigger: GTGAAGATGGAATTGTTCTCGAGTCCCAGGTGGTGCTGCCTGTCATCTATGAATTGATCTCATCAGTGATGCCCCCTGCAGAAAGCAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | TACAAAGCCTTTCGCTTATGCTGGGATGTTCGTAGAGGCTCACGATaGGGTGCGCTGGCTTCCCTATCACTCTTAAATATTCCTGATCGT | + |
|
Preference number: 5 (lower is better) Translates to: YKAFRLCWDVRRGSR*GALASLSLLNIPDR Trigger: ACGATCAGGAATATTTAAGAGTGATAGGGAAGCCAGCGCACCTCATCGTGAGCCTCTACGAACATCCCAGCATAAGCGAAAGGCTTTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 90 bp | GCCAAGGCGAGGTCCAGATCCACCACCCGACAGTTAAACACTTTATaGAGGAGTGTCGTAGCATTTTCTCTGATAAATGTGATGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: AKARSRSTTRQLNTL*RSVVAFSLINVMDF Trigger: GAAGTCCATCACATTTATCAGAGAAAATGCTACGACACTCCTGCATAAAGTGTTTAACTGTCGGGTGGTGGATCTGGACCTCGCCTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | GACTGGTCTGCAACGATTATAAACCCATGGCTTAAGCTGAATGCTTaGATCTTCGGACTCAGTGAGGTCTTCTCAGAGGAGATCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: DWSATIINPWLKLNA*IFGLSEVFSEEIFP Trigger: TGGGAAGATCTCCTCTGAGAAGACCTCACTGAGTCCGAAGATCCAAGCATTCAGCTTAAGCCATGGGTTTATAATCGTTGCAGACCAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 90 bp | CCCTGGGCCACCTTCAGAGCATCTTCTAAAGAAGACGGGATGTCCTaGTTTAGAATGTATCGGATCACTCTCATTATTTCCTTGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PWATFRASSKEDGMS*FRMYRITLIISLFR Trigger: CCTGAACAAGGAAATAATGAGAGTGATCCGATACATTCTAAAGCAGGACATCCCGTCTTCTTTAGAAGATGCTCTGAAGGTGGCCCAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031366.12 ENSMUST00000198841.2 |
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| CDS CCA 90 bp | TATTCTAAGCAAAGCTCTGCAACCAATCGTACTGCCATAGGTTCGTaGCTGTGGTTCTTCCACAAGCCCTTAATCATGCCTTCTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: YSKQSSATNRTAIGS*LWFFHKPLIMPSLG Trigger: TCCCAAAGAAGGCATGATTAAGGGCTTGTGGAAGAACCACAGCCACGAACCTATGGCAGTACGATTGGTTGCAGAGCTTTGCTTAGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | CTGTCAAGCAATATCACTGACTGGTCTGCAACGATTATAAACCCATaGCTTAAGCTGAATGCTTGGATCTTCGGACTCAGTGAGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSSNITDWSATIINP*LKLNAWIFGLSEVF Trigger: GAAGACCTCACTGAGTCCGAAGATCCAAGCATTCAGCTTAAGCCATGGGTTTATAATCGTTGCAGACCAGTCAGTGATATTGCTTGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | CACAGGCCGACCACATCCACGTCAGTATCGAAGATAAGAAACAACTaGAGTGATCTGCATATACTGTCAAGCAATATCACTGACTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HRPTTSTSVSKIRNN*SDLHILSSNITDWS Trigger: AGACCAGTCAGTGATATTGCTTGACAGTATATGCAGATCACTCCAGTTGTTTCTTATCTTCGATACTGACGTGGATGTGGTCGGCCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | TCATTTGAACCATCTTTCTCAATAATGAGATTCCGGTACGTTCGCTaGCTCTCGTCCAAAGCTTTCTCCACAAAAGCCTTGGTGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFEPSFSIMRFRYVR*LSSKAFSTKALVNS Trigger: GCTGTTCACCAAGGCTTTTGTGGAGAAAGCTTTGGACGAGAGTCAGCGAACGTACCGGAATCTCATTATTGAGAAAGATGGTTCAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | CATCCTTCTTCTGCAGATTGTCTTTTCGAATATCACACAGGATCTTaGGAATATCCACCGATGTCTTCGCCACAGATATTCTCCAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HPSSADCLFEYHTGS*EYPPMSSPQIFSRP Trigger: AGGCCTGGAGAATATCTGTGGCGAAGACATCGGTGGATATTCTCAAGATCCTGTGTGATATTCGAAAAGACAATCTGCAGAAGAAGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 90 bp | TCGTCCTGGATTTTGCATAGGTTTTCTTTAGCTTCATCTACAAGTTaGTGCCATTTGGACTGCTCACTCTTGTCCGAGGAAATCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSWILHRFSLASSTS*CHLDCSLLSEEIKA Trigger: GGCTTTGATTTCCTCGGACAAGAGTGAGCAGTCCAAATGGCAGCAACTTGTAGATGAAGCTAAAGAAAACCTATGCAAAATCCAGGACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 90 bp | GAGCGGCCTTCATCAGCATTCCACAGTCATCCATCTGGCATTGTCTaGAAAGCTCCACAGCGGTTAAAGTGTATTTACTTAGTTCTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ERPSSAFHSHPSGIV*KAPQRLKCIYLVLK Trigger: TTTTAGAACTAAGTAAATACACTTTAACCGCTGTGGAGCTTTGCAGACAATGCCAGATGGATGACTGTGGAATGCTGATGAAGGCCGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | AAATACCAAGTTTACCAAGACGAATACCCCACTTGGCATCGATACTaGGCTCGTGGAACCAAAGTCCTGTTTCAATATCCTGGTAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KYQVYQDEYPTWHRY*ARGTKVLFQYPGRD Trigger: ATCTCTACCAGGATATTGAAACAGGACTTTGGTTCCACGAGCTCAGTATCGATGCCAAGTGGGGTATTCGTCTTGGTAAACTTGGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 90 bp | GAATGCACAACTACCGGTTCCCCCAATTATCACAGAAGTTTTACTTaGAAATGTTCCAGATTGAGATGCCACAAGACTGAGACAACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ECTTTGSPNYHRSFT*KCSRLRCHKTETTV Trigger: CACAGTTGTCTCAGTCTTGTGGCATCTCAATCTGGAACATTTGCAAGTAAAACTTCTGTGATAATTGGGGGAACCGGTAGTTGTGCATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 90 bp | CATAGGTTTTCTTTAGCTTCATCTACAAGTTGCTGCCATTTGGACTaGTCACTCTTGTCCGAGGAAATCAAAGCCAGCTTCTCCAACATA | + |
|
Preference number: 5 (lower is better) Translates to: HRFSLASSTSCCHLD*SLLSEEIKASFSNI Trigger: TATGTTGGAGAAGCTGGCTTTGATTTCCTCGGACAAGAGTGAGCAGTCCAAATGGCAGCAACTTGTAGATGAAGCTAAAGAAAACCTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 90 bp | TACAAGAGGGAGAATACGGTTTTCTCCTTCACTAGTGGAGCAGTATaGCAAACTTATAGAATCCAAAGGATGTCTTTTGCTTTCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YKRENTVFSFTSGAV*QTYRIQRMSFAFCR Trigger: CCTGCAGAAAGCAAAAGACATCCTTTGGATTCTATAAGTTTGCCATACTGCTCCACTAGTGAAGGAGAAAACCGTATTCTCCCTCTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 90 bp | AAGATAATGCCAGAATTTTGTCGTAATTCTGCCACGCTTTATCTATaGACTTCCAGAGGTTGTCGAATACATCCTTTTGAGGTAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KIMPEFCRNSATLYL*TSRGCRIHPFEVRE Trigger: CTCTCTTACCTCAAAAGGATGTATTCGACAACCTCTGGAAGTTCATAGATAAAGCGTGGCAGAATTACGACAAAATTCTGGCATTATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | ACCTGCAGGGCCAGTGCCTGTCGGTGCAGCTTTGACTaGATGCTCAGGTGTGTCCCCCTAGCCGGGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TCRASACRCSFD*MLRCVPLAGVG Trigger: GCCCACCCCGGCTAGGGGGACACACCTGAGCATCAAGTCAAAGCTGCACCGACAGGCACTGGCCCTGCAGGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | GTGAGGCTGATGGCAATGGCGACAGCCCACTCGGGGTaGACGATGGACAGGAGGTACGACTCCAGCGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VRLMAMATAHSG*TMDRRYDSSVC Trigger: GCAGACGCTGGAGTCGTACCTCCTGTCCATCGTCAACCCCGAGTGGGCTGTCGCCATTGCCATCAGCCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | AAGGAGCCCACCACGAACCTCAGGGCTAGCTCCCACTaGCTACATTCCTGGAGGCTCCGGAGCAGAGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: KEPTTNLRASSH*LHSWRLRSRAE Trigger: CTCTGCTCTGCTCCGGAGCCTCCAGGAATGTAGTCAGTGGGAGCTAGCCCTGAGGTTCGTGGTGGGCTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 72 bp | GGACTGCAGATGGTGACAGCGTGGCATGCGAGGTCATaGATCTCAGAAGGAAGGCTGAGTCCTCCTGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLQMVTAWHARS*ISEGRLSPPGA Trigger: GGCCCCAGGAGGACTCAGCCTTCCTTCTGAGATCCATGACCTCGCATGCCACGCTGTCACCATCTGCAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | CGTGGCATGCGAGGTCATGGATCTCAGAAGGAAGGCTaGGTCCTCCTGGGGCCACCATTGGGACATCGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RGMRGHGSQKEG*VLLGPPLGHRQ Trigger: CTGACGATGTCCCAATGGTGGCCCCAGGAGGACTCAGCCTTCCTTCTGAGATCCATGACCTCGCATGCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 72 bp | CAGGCCTTGTCCTCCTCAGAGCCGTCAGGCTCCTCCTaGAGTGCCAGTCGAGCCCAGATGATAACCCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QALSSSEPSGSS*SASRAQMITLS Trigger: AGAAAGGGTTATCATCTGGGCTCGACTGGCACTGCAGGAGGAGCCTGACGGCTCTGAGGAGGACAAGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 72 bp | TGGCTTTCGCCAGGAGTTTGGAATGCTGATGCTTTGTaGACTCCGGGGCAGCATCTCCCTGGCTCTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WLSPGVWNADAL*TPGQHLPGSGC Trigger: GCAGCCAGAGCCAGGGAGATGCTGCCCCGGAGTCCACAAAGCATCAGCATTCCAAACTCCTGGCGAAAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 90 bp | TTTGTGGACTCCGGGGCAGCATCTCCCTGGCTCTGGCTGCTAGTGTaGCGGAGCAGAGTTTCAATGAACAGCCGAAGGGCAGCGTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FVDSGAASPWLWLLV*RSRVSMNSRRAASE Trigger: CTCTGACGCTGCCCTTCGGCTGTTCATTGAAACTCTGCTCCGCAACACTAGCAGCCAGAGCCAGGGAGATGCTGCCCCGGAGTCCACAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 90 bp | ACTTCCTGGGTGAGGCTGATGGCAATGGCGACAGCCCACTCGGGGTaGACGATGGACAGGAGGTACGACTCCAGCGTCTGCATGAGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: TSWVRLMAMATAHSG*TMDRRYDSSVCMSL Trigger: TAAGCTCATGCAGACGCTGGAGTCGTACCTCCTGTCCATCGTCAACCCCGAGTGGGCTGTCGCCATTGCCATCAGCCTCACCCAGGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 90 bp | GACAGGAGGTACGACTCCAGCGTCTGCATGAGCTTATCCACTTCCTaGCTCATCAGGGTGGAGGACCTGGCTTGTGCCGACTTCAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: DRRYDSSVCMSLSTS*LIRVEDLACADFRS Trigger: GCTCCTGAAGTCGGCACAAGCCAGGTCCTCCACCCTGATGAGCAAGGAAGTGGATAAGCTCATGCAGACGCTGGAGTCGTACCTCCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | GTTCAGCTTGTGGGCTATGAGCACGGCTTCCGTTCCTaGGAGCCGGACCTGGAGGCAGAGCTTCTTCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VQLVGYEHGFRS*EPDLEAELLLQ Trigger: TTGCAGAAGAAGCTCTGCCTCCAGGTCCGGCTCTCAGGAACGGAAGCCGTGCTCATAGCCCACAAGCTGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 72 bp | GGGCCGAGACCCTGTCGAACATGCGGAACACCACAGTaGTGGCATTTTCCTTCTCAAAGTCCGAGAGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GPRPCRTCGTPQ*WHFPSQSPRGP Trigger: TGGCCCTCTCGGACTTTGAGAAGGAAAATGCCACCACTGTGGTGTTCCGCATGTTCGACAGGGTCTCGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | TCCACCGATGTCTTCGCCACAGATATTCTCCAGGCCTaGTCCTCCTCAGAGCCGTCAGGCTCCTCCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: STDVFATDILQA*SSSEPSGSSCS Trigger: ACTGCAGGAGGAGCCTGACGGCTCTGAGGAGGACAAGGCCTGGAGAATATCTGTGGCGAAGACATCGGTGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 72 bp | AAACTAGACATCTTGAAGGGGCCTTCTGGGACTTCCTaGGTGAGGCTGATGGCAATGGCGACAGCCCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: KLDILKGPSGTS*VRLMAMATAHS Trigger: CGAGTGGGCTGTCGCCATTGCCATCAGCCTCACCCAGGAAGTCCCAGAAGGCCCCTTCAAGATGTCTAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 72 bp | GCCGGACCTGGAGGCAGAGCTTCTTCTGCAAGGCTTTaGCCTTTTCACACGTCTCATCCTGAGGTGGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: AGPGGRASSARL*PFHTSHPEVGC Trigger: ACATCCCACCTCAGGATGAGACGTGTGAAAAGGCCAAAGCCTTGCAGAAGAAGCTCTGCCTCCAGGTCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | TACGACTCCAGCGTCTGCATGAGCTTATCCACTTCCTaGCTCATCAGGGTGGAGGACCTGGCTTGTGCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: YDSSVCMSLSTS*LIRVEDLACAD Trigger: GTCGGCACAAGCCAGGTCCTCCACCCTGATGAGCAAGGAAGTGGATAAGCTCATGCAGACGCTGGAGTCGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 90 bp | TTGAGAATATCCACCGATGTCTTCGCCACAGATATTCTCCAGGCCTaGTCCTCCTCAGAGCCGTCAGGCTCCTCCTGCAGTGCCAGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: LRISTDVFATDILQA*SSSEPSGSSCSASR Trigger: TCGACTGGCACTGCAGGAGGAGCCTGACGGCTCTGAGGAGGACAAGGCCTGGAGAATATCTGTGGCGAAGACATCGGTGGATATTCTCAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 72 bp | GGGTTGACGATGGACAGGAGGTACGACTCCAGCGTCTaGATGAGCTTATCCACTTCCTTGCTCATCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GLTMDRRYDSSV*MSLSTSLLIRV Trigger: CACCCTGATGAGCAAGGAAGTGGATAAGCTCATGCAGACGCTGGAGTCGTACCTCCTGTCCATCGTCAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 72 bp | GTAAAGGGACCAGCTCAGTGGCTTTCGCCAGGAGTTTaGAATGCTGATGCTTTGTGGACTCCGGGGCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VKGPAQWLSPGV*NADALWTPGQH Trigger: ATGCTGCCCCGGAGTCCACAAAGCATCAGCATTCCAAACTCCTGGCGAAAGCCACTGAGCTGGTCCCTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 72 bp | CACTGCAGAGCTCGTGCTTTGTGGGCAAACGTTAGCTaGCGCATGCCCAGTGTACTTGTAGCTGAAGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HCRARALWANVS*RMPSVLVAEVA Trigger: TGCCACTTCAGCTACAAGTACACTGGGCATGCGCCAGCTAACGTTTGCCCACAAAGCACGAGCTCTGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | AGGATGGCGACGAGACTGTCACAGCAGTCTGCTAACTaGCTGGGTCTTAAAGGACAGGAAGCCGAGAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RMATRLSQQSAN*LGLKGQEAESR Trigger: TCTGCTCTCGGCTTCCTGTCCTTTAAGACCCAGTCAGTTAGCAGACTGCTGTGACAGTCTCGTCGCCATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031366.12 ENSMUST00000197265.2 |
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| CDS GCA 72 bp | GATGAGGGAGAATCCGCTTCTGTCGTGAGAACAAACTaGTCTACGGGAAGAGAGGGCCAGTTCCACACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: DEGESASVVRTN*STGREGQFHTG Trigger: TCCTGTGTGGAACTGGCCCTCTCTTCCCGTAGAGCAGTTTGTTCTCACGACAGAAGCGGATTCTCCCTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 72 bp | CATTTCCAGGTGCTGTTTCACCAGCTGCTCCACGGCTaGACTCCAGGGAACCACCGCCTTGTACATTATCTT | + |
|
Preference number: 6 (lower is better) Translates to: HFQVLFHQLLHG*TPGNHRLVHYL Trigger: AAGATAATGTACAAGGCGGTGGTTCCCTGGAGTGCAGCCGTGGAGCAGCTGGTGAAACAGCACCTGGAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 72 bp | AGAGTGATCATGTGCTCCAGCGCGTACTGGTATTCGTaGTCCACTGGCGGGGAGATCCTTCTGTATGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: RVIMCSSAYWYS*STGGEILLYDF Trigger: GAAGTCATACAGAAGGATCTCCCCGCCAGTGGACCACGAATACCAGTACGCGCTGGAGCACATGATCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 72 bp | CCTCTTCCAGCTCAAAGAACTCCGATGCTTTCTCACTaGGCACCGTTGAGGGGCACAGCCATTTCTCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: PLPAQRTPMLSH*APLRGTAISPT Trigger: TGTTGGAGAAATGGCTGTGCCCCTCAACGGTGCCCAGTGAGAAAGCATCGGAGTTCTTTGAGCTGGAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | CCGCTTCTCTCCCCCACAAAGAGAAACTTTCCTTCTTaGCACAGGCCGACCACATCCACGTCAGTATCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLLSPTKRNFPS*HRPTTSTSVSK Trigger: CTTCGATACTGACGTGGATGTGGTCGGCCTGTGTCAAGAAGGAAAGTTTCTCTTTGTGGGGGAGAGAAGCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | GCTCTACGGGAAGAGAGGGCCAGTTCCACACAGGAGTaGGAGTGTAAGCATCCCACAAGCTCAGCACATTAT | + |
|
Preference number: 6 (lower is better) Translates to: ALREERASSTQE*ECKHPTSSAHY Trigger: ATAATGTGCTGAGCTTGTGGGATGCTTACACTCTCACTCCTGTGTGGAACTGGCCCTCTCTTCCCGTAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | TCAATGAACAGCCGAAGGGCAGCGTCAGAGTCCAGCTaGAATGTGCTGCAATACTCCAGAATGAGGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SMNSRRAASESS*NVLQYSRMRLV Trigger: CACCAGCCTCATTCTGGAGTATTGCAGCACATTTCAGCTGGACTCTGACGCTGCCCTTCGGCTGTTCATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | CTCTTAAATATTCCTGATCGTTCAGCTTGTGGGCTATaGGCACGGCTTCCGTTCCTGAGAGCCGGACCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLNIPDRSACGL*ARLPFLRAGPG Trigger: TCCAGGTCCGGCTCTCAGGAACGGAAGCCGTGCTCATAGCCCACAAGCTGAACGATCAGGAATATTTAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | GTACTGCTTGGCGACTCCCATCATGTCCAGGTCATCTaGAACTGGACATTCAAGGATGGCGACGAGACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VLLGDSHHVQVI*NWTFKDGDETV Trigger: GACAGTCTCGTCGCCATCCTTGAATGTCCAGTTTCAGATGACCTGGACATGATGGGAGTCGCCAAGCAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 72 bp | CAAATAATCTGGACTGCAGATGGTGACAGCGTGGCATaGGAGGTCATGGATCTCAGAAGGAAGGCTGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QIIWTADGDSVA*EVMDLRRKAES Trigger: GGACTCAGCCTTCCTTCTGAGATCCATGACCTCGCATGCCACGCTGTCACCATCTGCAGTCCAGATTATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 72 bp | CTCAAGCTGATACTCATGACGTTTGACATAGAGTGCTaGAGGCAGGTACCAAAGGAGCCCACCACGAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: LKLILMTFDIEC*RQVPKEPTTNL Trigger: GAGGTTCGTGGTGGGCTCCTTTGGTACCTGCCTGCAGCACTCTATGTCAAACGTCATGAGTATCAGCTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | AGCTGCTCCACGGCTGCACTCCAGGGAACCACCGCCTaGTACATTATCTTCAGCACAGCATCAAAGATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SCSTAALQGTTA*YIIFSTASKMR Trigger: TCTCATCTTTGATGCTGTGCTGAAGATAATGTACAAGGCGGTGGTTCCCTGGAGTGCAGCCGTGGAGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | ATCCACTTCCTTGCTCATCAGGGTGGAGGACCTGGCTaGTGCCGACTTCAGGAGCTTTGGCTTCAGGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: IHFLAHQGGGPG*CRLQELWLQVF Trigger: AAAAACCTGAAGCCAAAGCTCCTGAAGTCGGCACAAGCCAGGTCCTCCACCCTGATGAGCAAGGAAGTGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 90 bp | AGGCAGGTCAGAGCAAAAGCGGGAAGGTCTAACTGGACGTACTGCTaGGCGACTCCCATCATGTCCAGGTCATCTGAAACTGGACATTCA | + |
|
Preference number: 6 (lower is better) Translates to: RQVRAKAGRSNWTYC*ATPIMSRSSETGHS Trigger: TGAATGTCCAGTTTCAGATGACCTGGACATGATGGGAGTCGCCAAGCAGTACGTCCAGTTAGACCTTCCCGCTTTTGCTCTGACCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 90 bp | GTGGTGGCATTTTCCTTCTCAAAGTCCGAGAGGGCCAGCTTGCAGTaGTATTTCCTATGCAGAATGATCAGCTCCCGCAACTTGCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: VVAFSFSKSERASLQ*YFLCRMISSRNLLT Trigger: GGTGAGCAAGTTGCGGGAGCTGATCATTCTGCATAGGAAATACAACTGCAAGCTGGCCCTCTCGGACTTTGAGAAGGAAAATGCCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 90 bp | TGTTTCACCAGCTGCTCCACGGCTGCACTCCAGGGAACCACCGCCTaGTACATTATCTTCAGCACAGCATCAAAGATGAGATCTGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CFTSCSTAALQGTTA*YIIFSTASKMRSVS Trigger: TGACACAGATCTCATCTTTGATGCTGTGCTGAAGATAATGTACAAGGCGGTGGTTCCCTGGAGTGCAGCCGTGGAGCAGCTGGTGAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS TCA 72 bp | AGAGGGCCAGCTTGCAGTTGTATTTCCTATGCAGAATaGTCAGCTCCCGCAACTTGCTCACCAGTGTCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: RGPACSCISYAE*SAPATCSPVSV Trigger: TACGGACACTGGTGAGCAAGTTGCGGGAGCTGATCATTCTGCATAGGAAATACAACTGCAAGCTGGCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS TCA 72 bp | TCGCGATTAAGAGCAGGGTTGGCAGCGACTCTTCGCTaGGCTCTGAGGAGAGAATTTTCCAGAAGTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SRLRAGLAATLR*ALRREFSRSSV Trigger: CACAGAACTTCTGGAAAATTCTCTCCTCAGAGCTCAGCGAAGAGTCGCTGCCAACCCTGCTCTTAATCGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS TCA 72 bp | AGGTGCGCTGGCTTCCCTATCACTCTTAAATATTCCTaGTCGTTCAGCTTGTGGGCTATGAGCACGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RCAGFPITLKYS*SFSLWAMSTAS Trigger: GGAAGCCGTGCTCATAGCCCACAAGCTGAACGATCAGGAATATTTAAGAGTGATAGGGAAGCCAGCGCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS TCA 72 bp | TTGTTTGGTGACAGTAGCTGGGACAGTTTAGCTTCATaGAGATGGAGTCAGCAAAGCAGCCCCCGCCACACA | + |
|
Preference number: 6 (lower is better) Translates to: LFGDSSWDSLAS*RWSQQSSPRHT Trigger: TGTGTGGCGGGGGCTGCTTTGCTGACTCCATCTTCATGAAGCTAAACTGTCCCAGCTACTGTCACCAAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198841.2 |
||
| CDS GCA 72 bp | AAGTCCGAGAGGGCCAGCTTGCAGTTGTATTTCCTATaGAGAATGATCAGCTCCCGCAACTTGCTCACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: KSERASLQLYFL*RMISSRNLLTS Trigger: ACTGGTGAGCAAGTTGCGGGAGCTGATCATTCTGCATAGGAAATACAACTGCAAGCTGGCCCTCTCGGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS GCA 72 bp | TCCCCTGTGTTTGTGCTCAGCCTGTGCAGCTTCCTGTaGCTTAATATACTGTTCTCGAAGGCCAGCTACCAA | + |
|
Preference number: 6 (lower is better) Translates to: SPVFVLSLCSFL*LNILFSKASYQ Trigger: TTGGTAGCTGGCCTTCGAGAACAGTATATTAAGGCACAGGAAGCTGCACAGGCTGAGCACAAACACAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS GCA 72 bp | AGAGGTTGTCGAATACATCCTTTTGAGGTAAGAGAGTaGAGTAAGCCAAGGCGAGGTCCAGATCCACCACCC | + |
|
Preference number: 6 (lower is better) Translates to: RGCRIHPFEVRE*SKPRRGPDPPP Trigger: GGGTGGTGGATCTGGACCTCGCCTTGGCTTACTGCACTCTCTTACCTCAAAAGGATGTATTCGACAACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS GCA 72 bp | TCAACAGGACGAGCCTGGAGGAGATACACGACTCTATaGAGCACTTCATCCTCTTCCAGCTCAAAGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: STGRAWRRYTTL*STSSSSSSKNS Trigger: GGAGTTCTTTGAGCTGGAAGAGGATGAAGTGCTGCATAGAGTCGTGTATCTCCTCCAGGCTCGTCCTGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 72 bp | CTGTGTCAGACAAGCATCTTATCACGGCCATGGCCTTaGCTTCCCACGCTGTGTCGAAGAGAGTCATTGACT | + |
|
Preference number: 6 (lower is better) Translates to: LCQTSILSRPWP*LPTLCRRESLT Trigger: AGTCAATGACTCTCTTCGACACAGCGTGGGAAGCAAAGGCCATGGCCGTGATAAGATGCTTGTCTGACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS TCA 72 bp | GTCGGCTTGGTACAGTGCAGTCACGTTTTCTTTTCTTaGGCCAACACTCAGGCATCCACTTCCAGTGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: VGLVQCSHVFFS*ANTQASTSSVI Trigger: GATGACACTGGAAGTGGATGCCTGAGTGTTGGCTCAAGAAAAGAAAACGTGACTGCACTGTACCAAGCCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS TCA 72 bp | ATGGCAAAGCTCTCGGCTTCGGCAAATCTGTGCTTGTaGAGTAACCGGCTCAGTCTGTTTTCTGGTAACACC | + |
|
Preference number: 6 (lower is better) Translates to: MAKLSASANLCL*SNRLSLFSGNT Trigger: GGTGTTACCAGAAAACAGACTGAGCCGGTTACTTCACAAGCACAGATTTGCCGAAGCCGAGAGCTTTGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS TCA 72 bp | TTTCCTGGGTGGTTTCATAGGTTACCCATTGGGCCTTaGGGCAGAAATTCACCACGAAGTCATCGTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: FPGWFHRLPIGP*GRNSPRSHRPG Trigger: TCCAGGACGATGACTTCGTGGTGAATTTCTGCCTCAAGGCCCAATGGGTAACCTATGAAACCACCCAGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS GCA 72 bp | TTACTCAAGCTGATACTCATGACGTTTGACATAGAGTaGTGCAGGCAGGTACCAAAGGAGCCCACCACGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LLKLILMTFDIE*CRQVPKEPTTN Trigger: GTTCGTGGTGGGCTCCTTTGGTACCTGCCTGCAGCACTCTATGTCAAACGTCATGAGTATCAGCTTGAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CCA 72 bp | CAAAGCTCTGCAACCAATCGTACTGCCATAGGTTCGTaGCTGTGGTTCTTCCACAAGCCCTTAATCATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QSSATNRTAIGS*LWFFHKPLIMP Trigger: AGGCATGATTAAGGGCTTGTGGAAGAACCACAGCCACGAACCTATGGCAGTACGATTGGTTGCAGAGCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031366.12 ENSMUST00000197265.2 |
||
| CDS CAA 72 bp | TTGTATTTCCTATGCAGAATGATCAGCTCCCGCAACTaGCTCACCAGTGTCCGTAACTGGCGGACTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LYFLCRMISSRN*LTSVRNWRTSS Trigger: AGAGGAAGTCCGCCAGTTACGGACACTGGTGAGCAAGTTGCGGGAGCTGATCATTCTGCATAGGAAATACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 90 bp | TCCCAAGCAAGTCGGCTTGGTACAGTGCAGTCACGTTTTCTTTTCTaGAGCCAACACTCAGGCATCCACTTCCAGTGTCATCGCTTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SQASRLGTVQSRFLF*SQHSGIHFQCHRLL Trigger: TAACAAGCGATGACACTGGAAGTGGATGCCTGAGTGTTGGCTCAAGAAAAGAAAACGTGACTGCACTGTACCAAGCCGACTTGCTTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CCA 72 bp | GTCTTCTCAGAGGAGATCTTCCCAAGCAAGTCGGCTTaGTACAGTGCAGTCACGTTTTCTTTTCTTGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VFSEEIFPSKSA*YSAVTFSFLEP Trigger: TGGCTCAAGAAAAGAAAACGTGACTGCACTGTACCAAGCCGACTTGCTTGGGAAGATCTCCTCTGAGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CCA 72 bp | TCTGCAACCAATCGTACTGCCATAGGTTCGTGGCTGTaGTTCTTCCACAAGCCCTTAATCATGCCTTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SATNRTAIGSWL*FFHKPLIMPSL Trigger: CAAAGAAGGCATGATTAAGGGCTTGTGGAAGAACCACAGCCACGAACCTATGGCAGTACGATTGGTTGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 72 bp | AGTCGGCTTGGTACAGTGCAGTCACGTTTTCTTTTCTaGAGCCAACACTCAGGCATCCACTTCCAGTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SRLGTVQSRFLF*SQHSGIHFQCH Trigger: ATGACACTGGAAGTGGATGCCTGAGTGTTGGCTCAAGAAAAGAAAACGTGACTGCACTGTACCAAGCCGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 72 bp | ACTGAGCATTTCCTGGGTGGTTTCATAGGTTACCCATaGGGCCTTGAGGCAGAAATTCACCACGAAGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: TEHFLGGFIGYP*GLEAEIHHEVI Trigger: GATGACTTCGTGGTGAATTTCTGCCTCAAGGCCCAATGGGTAACCTATGAAACCACCCAGGAAATGCTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 72 bp | GTGGCATTTTCCTTCTCAAAGTCCGAGAGGGCCAGCTaGCAGTTGTATTTCCTATGCAGAATGATCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VAFSFSKSERAS*QLYFLCRMISS Trigger: GGAGCTGATCATTCTGCATAGGAAATACAACTGCAAGCTGGCCCTCTCGGACTTTGAGAAGGAAAATGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 90 bp | TTTGGCATAACTGAGCATTTCCTGGGTGGTTTCATAGGTTACCCATaGGGCCTTGAGGCAGAAATTCACCACGAAGTCATCGTCCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: FGITEHFLGGFIGYP*GLEAEIHHEVIVLD Trigger: ATCCAGGACGATGACTTCGTGGTGAATTTCTGCCTCAAGGCCCAATGGGTAACCTATGAAACCACCCAGGAAATGCTCAGTTATGCCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 90 bp | TCACGGCCATGGCCTTTGCTTCCCACGCTGTGTCGAAGAGAGTCATaGACTTTGAGCTACACCTCTTCAGTAAATCCTCTATATAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRPWPLLPTLCRRES*TLSYTSSVNPLYRA Trigger: TGCTCTATATAGAGGATTTACTGAAGAGGTGTAGCTCAAAGTCAATGACTCTCTTCGACACAGCGTGGGAAGCAAAGGCCATGGCCGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 90 bp | CCATGGCCTTTGCTTCCCACGCTGTGTCGAAGAGAGTCATTGACTTaGAGCTACACCTCTTCAGTAAATCCTCTATATAGAGCAACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PWPLLPTLCRRESLT*SYTSSVNPLYRATA Trigger: TGCTGTTGCTCTATATAGAGGATTTACTGAAGAGGTGTAGCTCAAAGTCAATGACTCTCTTCGACACAGCGTGGGAAGCAAAGGCCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | TTTCGCTTATGCTGGGATGTTCGTAGAGGCTCACGATaGGGTGCGCTGGCTTCCCTATCACTCTTAAATATT | + |
|
Preference number: 6 (lower is better) Translates to: FRLCWDVRRGSR*GALASLSLLNI Trigger: AATATTTAAGAGTGATAGGGAAGCCAGCGCACCTCATCGTGAGCCTCTACGAACATCCCAGCATAAGCGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 72 bp | GCAACGATTATAAACCCATGGCTTAAGCTGAATGCTTaGATCTTCGGACTCAGTGAGGTCTTCTCAGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ATIINPWLKLNA*IFGLSEVFSEE Trigger: CTCCTCTGAGAAGACCTCACTGAGTCCGAAGATCCAAGCATTCAGCTTAAGCCATGGGTTTATAATCGTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CCA 72 bp | CCTTATAAACAAGCTCAACATCCAGTCCGAACTGAATaGCAAAGCTCTCGGCTTCGGCAAATCTGTGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PYKQAQHPVRTE*QSSRLRQICAC Trigger: ACAAGCACAGATTTGCCGAAGCCGAGAGCTTTGCCATTCAGTTCGGACTGGATGTTGAGCTTGTTTATAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CCA 72 bp | CGGCTGTATGGATATCGGGATAATCTTTGCCAGATGTaGTACAAAGCCTTTCGCTTATGCTGGGATGTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: RLYGYRDNLCQM*YKAFRLCWDVR Trigger: ACGAACATCCCAGCATAAGCGAAAGGCTTTGTACCACATCTGGCAAAGATTATCCCGATATCCATACAGCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 72 bp | CAAAGCTTTCTCCACAAAAGCCTTGGTGAACAGCGTTaGCTTCGATGTGACGTAGATAAGGTGGAAGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: QSFLHKSLGEQR*LRCDVDKVEVA Trigger: GGCAACTTCCACCTTATCTACGTCACATCGAAGCAAACGCTGTTCACCAAGGCTTTTGTGGAGAAAGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | TGGCCTTTGCTTCCCACGCTGTGTCGAAGAGAGTCATaGACTTTGAGCTACACCTCTTCAGTAAATCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: WPLLPTLCRRES*TLSYTSSVNPL Trigger: TAGAGGATTTACTGAAGAGGTGTAGCTCAAAGTCAATGACTCTCTTCGACACAGCGTGGGAAGCAAAGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 90 bp | AGGCTTCTCATCTTCTCCTTCGCTGTTGCTGTCAGGGTGACTAATTaGAGATTTGTAATTCCTTGCCAGGTAACAGATGAGGGAGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: RLLIFSFAVAVRVTN*RFVIPCQVTDEGES Trigger: GGATTCTCCCTCATCTGTTACCTGGCAAGGAATTACAAATCTCAAATTAGTCACCCTGACAGCAACAGCGAAGGAGAAGATGAGAAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS TCA 72 bp | GTTTACCAAGACGAATACCCCACTTGGCATCGATACTaGGCTCGTGGAACCAAAGTCCTGTTTCAATATCCT | + |
|
Preference number: 6 (lower is better) Translates to: VYQDEYPTWHRY*ARGTKVLFQYP Trigger: AGGATATTGAAACAGGACTTTGGTTCCACGAGCTCAGTATCGATGCCAAGTGGGGTATTCGTCTTGGTAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS TCA 72 bp | CAGAGTCCAGCTGAAATGTGCTGCAATACTCCAGAATaGGGCTGGTGTCCATGTCTATGTTATTCACAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QSPAEMCCNTPE*GWCPCLCYSQE Trigger: CTCTTGTGAATAACATAGACATGGACACCAGCCTCATTCTGGAGTATTGCAGCACATTTCAGCTGGACTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS TCA 72 bp | TGCAGGATAACACTTTCCTCAGGTAAGGAATCATGTTaGAGCCCAGAAGCTTCTGCAAGAGCCCATTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: CRITLSSGKESC*SPEASARAHSK Trigger: TTTGGAATGGGCTCTTGCAGAAGCTTCTGGGCTTCAACATGATTCCTTACCTGAGGAAAGTGTTATCCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031366.12 ENSMUST00000197265.2 |
||
| CDS GCA 72 bp | TCTTTAGCTTCATCTACAAGTTGCTGCCATTTGGACTaGTCACTCTTGTCCGAGGAAATCAAAGCCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLASSTSCCHLD*SLLSEEIKASF Trigger: GAAGCTGGCTTTGATTTCCTCGGACAAGAGTGAGCAGTCCAAATGGCAGCAACTTGTAGATGAAGCTAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 72 bp | TCATCTACAAGTTGCTGCCATTTGGACTGCTCACTCTaGTCCGAGGAAATCAAAGCCAGCTTCTCCAACATA | + |
|
Preference number: 6 (lower is better) Translates to: SSTSCCHLDCSL*SEEIKASFSNI Trigger: TATGTTGGAGAAGCTGGCTTTGATTTCCTCGGACAAGAGTGAGCAGTCCAAATGGCAGCAACTTGTAGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 90 bp | TGGGCCTTGAGGCAGAAATTCACCACGAAGTCATCGTCCTGGATTTaGCATAGGTTTTCTTTAGCTTCATCTACAAGTTGCTGCCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: WALRQKFTTKSSSWI*HRFSLASSTSCCHL Trigger: CAAATGGCAGCAACTTGTAGATGAAGCTAAAGAAAACCTATGCAAAATCCAGGACGATGACTTCGTGGTGAATTTCTGCCTCAAGGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 90 bp | TCATCCTTCTTCTGCAGATTGTCTTTTCGAATATCACACAGGATCTaGAGAATATCCACCGATGTCTTCGCCACAGATATTCTCCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSFFCRLSFRISHRI*RISTDVFATDILQA Trigger: GGCCTGGAGAATATCTGTGGCGAAGACATCGGTGGATATTCTCAAGATCCTGTGTGATATTCGAAAAGACAATCTGCAGAAGAAGGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS TCA 72 bp | CTTTCAAAGTCAGCCCGATGTCTAAGCCAAAGATACTaGGCACAAGCGAAGTTTCCTTCACTTAGCTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSKSARCLSQRY*AQAKFPSLSCK Trigger: TTTGCAGCTAAGTGAAGGAAACTTCGCTTGTGCTCAGTATCTTTGGCTTAGACATCGGGCTGACTTTGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS GCA 72 bp | AGGTCCAGATCCACCACCCGACAGTTAAACACTTTATaGAGGAGTGTCGTAGCATTTTCTCTGATAAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: RSRSTTRQLNTL*RSVVAFSLINV Trigger: CACATTTATCAGAGAAAATGCTACGACACTCCTGCATAAAGTGTTTAACTGTCGGGTGGTGGATCTGGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS GCA 72 bp | CCTGCTAGCTGGCCAGTGTTCATATGTTCTTCTATCTaGTGTAAAATGATCCGAGCATCACAGGAATTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PASWPVFICSSI*CKMIRASQEFR Trigger: TCTGAATTCCTGTGATGCTCGGATCATTTTACAGCAGATAGAAGAACATATGAACACTGGCCAGCTAGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 72 bp | AGGTTTTCTTTAGCTTCATCTACAAGTTGCTGCCATTaGGACTGCTCACTCTTGTCCGAGGAAATCAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RFSLASSTSCCH*DCSLLSEEIKA Trigger: GGCTTTGATTTCCTCGGACAAGAGTGAGCAGTCCAAATGGCAGCAACTTGTAGATGAAGCTAAAGAAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 72 bp | AAAGAAATACCAAGTTTACCAAGACGAATACCCCACTaGGCATCGATACTGAGCTCGTGGAACCAAAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KEIPSLPRRIPH*ASILSSWNQSP Trigger: AGGACTTTGGTTCCACGAGCTCAGTATCGATGCCAAGTGGGGTATTCGTCTTGGTAAACTTGGTATTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CAA 90 bp | GGGATGTCCTGCTTTAGAATGTATCGGATCACTCTCATTATTTCCTaGTTCAGGAGATTCACCTCTCTTATCCCATACCCTCGCAAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GMSCFRMYRITLIIS*FRRFTSLIPYPRKS Trigger: ACTTTTGCGAGGGTATGGGATAAGAGAGGTGAATCTCCTGAACAAGGAAATAATGAGAGTGATCCGATACATTCTAAAGCAGGACATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031366.12 ENSMUST00000198841.2 |
||
| CDS GCA 72 bp | ACTACCGGTTCCCCCAATTATCACAGAAGTTTTACTTaGAAATGTTCCAGATTGAGATGCCACAAGACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TTGSPNYHRSFT*KCSRLRCHKTE Trigger: CTCAGTCTTGTGGCATCTCAATCTGGAACATTTGCAAGTAAAACTTCTGTGATAATTGGGGGAACCGGTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS GCA 72 bp | TCATCAGCATTCCACAGTCATCCATCTGGCATTGTCTaGAAAGCTCCACAGCGGTTAAAGTGTATTTACTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSAFHSHPSGIV*KAPQRLKCIYL Trigger: TAAGTAAATACACTTTAACCGCTGTGGAGCTTTGCAGACAATGCCAGATGGATGACTGTGGAATGCTGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
||
| CDS CCA 72 bp | AATATCACTGACTGGTCTGCAACGATTATAAACCCATaGCTTAAGCTGAATGCTTGGATCTTCGGACTCAGT | + |
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Preference number: 6 (lower is better) Translates to: NITDWSATIINP*LKLNAWIFGLS Trigger: ACTGAGTCCGAAGATCCAAGCATTCAGCTTAAGCCATGGGTTTATAATCGTTGCAGACCAGTCAGTGATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 72 bp | GCCTTGAGGCAGAAATTCACCACGAAGTCATCGTCCTaGATTTTGCATAGGTTTTCTTTAGCTTCATCTACA | + |
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Preference number: 6 (lower is better) Translates to: ALRQKFTTKSSS*ILHRFSLASST Trigger: TGTAGATGAAGCTAAAGAAAACCTATGCAAAATCCAGGACGATGACTTCGTGGTGAATTTCTGCCTCAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | ATCTTCTCCTTCGCTGTTGCTGTCAGGGTGACTAATTaGAGATTTGTAATTCCTTGCCAGGTAACAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: IFSFAVAVRVTN*RFVIPCQVTDE Trigger: CTCATCTGTTACCTGGCAAGGAATTACAAATCTCAAATTAGTCACCCTGACAGCAACAGCGAAGGAGAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | TTGCTTCCCACGCTGTGTCGAAGAGAGTCATTGACTTaGAGCTACACCTCTTCAGTAAATCCTCTATATAGA | + |
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Preference number: 6 (lower is better) Translates to: LLPTLCRRESLT*SYTSSVNPLYR Trigger: TCTATATAGAGGATTTACTGAAGAGGTGTAGCTCAAAGTCAATGACTCTCTTCGACACAGCGTGGGAAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | CTGTGGTTCTTCCACAAGCCCTTAATCATGCCTTCTTaGGGACTGTTGCAGAATAATTCATATGTGATGGGA | + |
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Preference number: 6 (lower is better) Translates to: LWFFHKPLIMPS*GLLQNNSYVMG Trigger: TCCCATCACATATGAATTATTCTGCAACAGTCCCAAAGAAGGCATGATTAAGGGCTTGTGGAAGAACCACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 90 bp | TCTTTAGCTTCATCTACAAGTTGCTGCCATTTGGACTGCTCACTCTaGTCCGAGGAAATCAAAGCCAGCTTCTCCAACATATCATTTGAT | + |
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Preference number: 6 (lower is better) Translates to: SLASSTSCCHLDCSL*SEEIKASFSNISFD Trigger: ATCAAATGATATGTTGGAGAAGCTGGCTTTGATTTCCTCGGACAAGAGTGAGCAGTCCAAATGGCAGCAACTTGTAGATGAAGCTAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 90 bp | GGTTCGTGGCTGTGGTTCTTCCACAAGCCCTTAATCATGCCTTCTTaGGGACTGTTGCAGAATAATTCATATGTGATGGGAATATTCAAT | + |
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Preference number: 6 (lower is better) Translates to: GSWLWFFHKPLIMPS*GLLQNNSYVMGIFN Trigger: ATTGAATATTCCCATCACATATGAATTATTCTGCAACAGTCCCAAAGAAGGCATGATTAAGGGCTTGTGGAAGAACCACAGCCACGAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | ATCCAGCACAAAAAGCAGGTTGTCGATCAGCTGAAATaGCTTTGCACCTTTAATAATGTCTGTGCCCACAAA | + |
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Preference number: 6 (lower is better) Translates to: IQHKKQVVDQLK*LCTFNNVCAHK Trigger: TTTGTGGGCACAGACATTATTAAAGGTGCAAAGTCATTTCAGCTGATCGACAACCTGCTTTTTGTGCTGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | TCTGCAGATTGTCTTTTCGAATATCACACAGGATCTTaGGAATATCCACCGATGTCTTCGCCACAGATATTC | + |
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Preference number: 6 (lower is better) Translates to: SADCLFEYHTGS*EYPPMSSPQIF Trigger: GAATATCTGTGGCGAAGACATCGGTGGATATTCTCAAGATCCTGTGTGATATTCGAAAAGACAATCTGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | AGGCAGAAATTCACCACGAAGTCATCGTCCTGGATTTaGCATAGGTTTTCTTTAGCTTCATCTACAAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: RQKFTTKSSSWI*HRFSLASSTSC Trigger: GCAACTTGTAGATGAAGCTAAAGAAAACCTATGCAAAATCCAGGACGATGACTTCGTGGTGAATTTCTGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | GAATTCAGCAAATTCTCCAGCATTTTCACGTCAAACTaGCTTTCAAAGTCAGCCCGATGTCTAAGCCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: EFSKFSSIFTSN*LSKSARCLSQR Trigger: TCTTTGGCTTAGACATCGGGCTGACTTTGAAAGCAAGTTTGACGTGAAAATGCTGGAGAATTTGCTGAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | CGAGGAAATCAAAGCCAGCTTCTCCAACATATCATTTaGTTTGACCTTATAAACAAGCTCAACATCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: RGNQSQLLQHII*FDLINKLNIQS Trigger: GGACTGGATGTTGAGCTTGTTTATAAGGTCAAATCAAATGATATGTTGGAGAAGCTGGCTTTGATTTCCTCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | CCAGAATTTTGTCGTAATTCTGCCACGCTTTATCTATaGACTTCCAGAGGTTGTCGAATACATCCTTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: PEFCRNSATLYL*TSRGCRIHPFE Trigger: CTCAAAAGGATGTATTCGACAACCTCTGGAAGTTCATAGATAAAGCGTGGCAGAATTACGACAAAATTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CCA 72 bp | ACCACATCCACGTCAGTATCGAAGATAAGAAACAACTaGAGTGATCTGCATATACTGTCAAGCAATATCACT | + |
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Preference number: 6 (lower is better) Translates to: TTSTSVSKIRNN*SDLHILSSNIT Trigger: AGTGATATTGCTTGACAGTATATGCAGATCACTCCAGTTGTTTCTTATCTTCGATACTGACGTGGATGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | TCTGTGCCCACAAAGTTCTTAAGAGACATTTCTTTCTaGGTAGAATCGGGTTCCCATTTTGAGAATGCACAA | + |
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Preference number: 6 (lower is better) Translates to: SVPTKFLRDISF*VESGSHFENAQ Trigger: TTGTGCATTCTCAAAATGGGAACCCGATTCTACCAAGAAAGAAATGTCTCTTAAGAACTTTGTGGGCACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | CTGGCCAGTTTGCCTTATCAGTTAACTCTAGGTTCCTaGATGCTTGTTCTAGCCATTTTGCAAGAATGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LASLPYQLTLGS*MLVLAILQECF Trigger: AAAACATTCTTGCAAAATGGCTAGAACAAGCATCAAGGAACCTAGAGTTAACTGATAAGGCAAACTGGCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 90 bp | TTAATAATGTCTGTGCCCACAAAGTTCTTAAGAGACATTTCTTTCTaGGTAGAATCGGGTTCCCATTTTGAGAATGCACAACTACCGGTT | + |
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Preference number: 6 (lower is better) Translates to: LIMSVPTKFLRDISF*VESGSHFENAQLPV Trigger: AACCGGTAGTTGTGCATTCTCAAAATGGGAACCCGATTCTACCAAGAAAGAAATGTCTCTTAAGAACTTTGTGGGCACAGACATTATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | AAGACCTCAAAGTTCTCCTGTAAACTAGCAACCATTTaGAATCGCTTCAGGAATTCTTCAGATTCATCCTTC | + |
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Preference number: 6 (lower is better) Translates to: KTSKFSCKLATI*NRFRNSSDSSF Trigger: GAAGGATGAATCTGAAGAATTCCTGAAGCGATTTCAAATGGTTGCTAGTTTACAGGAGAACTTTGAGGTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS GCA 72 bp | AATCGCTTCAGGAATTCTTCAGATTCATCCTTCTTCTaGAGATTGTCTTTTCGAATATCACACAGGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: NRFRNSSDSSFF*RLSFRISHRIL Trigger: CAAGATCCTGTGTGATATTCGAAAAGACAATCTGCAGAAGAAGGATGAATCTGAAGAATTCCTGAAGCGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS TCA 72 bp | AAATCAAAGCCAGCTTCTCCAACATATCATTTGATTTaGCCTTATAAACAAGCTCAACATCCAGTCCGAACT | + |
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Preference number: 6 (lower is better) Translates to: KSKPASPTYHLI*PYKQAQHPVRT Trigger: AGTTCGGACTGGATGTTGAGCTTGTTTATAAGGTCAAATCAAATGATATGTTGGAGAAGCTGGCTTTGATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | AGGCTGGTGTCCATGTCTATGTTATTCACAAGAGCTTaGATAAGGTCTTTCTTGGTGAGAAAATTTTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: RLVSMSMLFTRA*IRSFLVRKFCL Trigger: TAGACAAAATTTTCTCACCAAGAAAGACCTTATCAAAGCTCTTGTGAATAACATAGACATGGACACCAGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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| CDS CAA 72 bp | TTCCACAAGCCCTTAATCATGCCTTCTTTGGGACTGTaGCAGAATAATTCATATGTGATGGGAATATTCAAT | + |
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Preference number: 6 (lower is better) Translates to: FHKPLIMPSLGL*QNNSYVMGIFN Trigger: ATTGAATATTCCCATCACATATGAATTATTCTGCAACAGTCCCAAAGAAGGCATGATTAAGGGCTTGTGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031366.12 |
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