Pregenerated sensors for KNOP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030980Ensembl transcript IDs: ENSMUST00000033277.9, ENSMUST00000063607.12, ENSMUST00000106549.9, ENSMUST00000106550.11, ENSMUST00000116280.9, ENSMUST00000126792.9, ENSMUST00000152309.3
Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCTGCCCATTTGGCAGTACTGCACACCTCACCCTCTCCCTGGCTaGCCTGAGGGGCATCTCCTTACCAAGGGGGCTGATACAGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: LLPIWQYCTPHPLPG*PEGHLLTKGADTGK Trigger: TTTTCCTGTATCAGCCCCCTTGGTAAGGAGATGCCCCTCAGGCCAGCCAGGGAGAGGGTGAGGTGTGCAGTACTGCCAAATGGGCAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR GCA 90 bp | AGCCAGCTCAGAGGTACTGGCCACGTCTGCCTGCTGCACCACACCTaGCTCCTGATAAGGGAGAAGGAAAACAAACTTGCAAGTCATGGC | + |
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Preference number: 1 (lower is better) Translates to: SQLRGTGHVCLLHHT*LLIREKENKLASHG Trigger: GCCATGACTTGCAAGTTTGTTTTCCTTCTCCCTTATCAGGAGGCAGGTGTGGTGCAGCAGGCAGACGTGGCCAGTACCTCTGAGCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR CCA 90 bp | CACATGGGTCTCTGTATCAGGAGCTCCATGAAGATTGCTGTGATTTaGGAGGGAGGGGTGGGAGGGTATGGTGCCTGCAGCAAAGTATCT | + |
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Preference number: 1 (lower is better) Translates to: HMGLCIRSSMKIAVI*EGGVGGYGACSKVS Trigger: AGATACTTTGCTGCAGGCACCATACCCTCCCACCCCTCCCTCCCAAATCACAGCAATCTTCATGGAGCTCCTGATACAGAGACCCATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR TCA 90 bp | ATCAACACTGATGACGGTGCTGGAAGGATGAATGAATGTCCTGGCTaGGTGCAGCATCAAACACCTCCATCCCCACCCAGTGTTTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: INTDDGAGRMNECPG*VQHQTPPSPPSVSA Trigger: GGCAGAAACACTGGGTGGGGATGGAGGTGTTTGATGCTGCACTCAGCCAGGACATTCATTCATCCTTCCAGCACCGTCATCAGTGTTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR GCA 90 bp | AAAATCATGTCACATGGGTCTCTGTATCAGGAGCTCCATGAAGATTaGTGTGATTTGGGAGGGAGGGGTGGGAGGGTATGGTGCCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: KIMSHGSLYQELHED*CDLGGRGGRVWCLQ Trigger: CTGCAGGCACCATACCCTCCCACCCCTCCCTCCCAAATCACAGCAATCTTCATGGAGCTCCTGATACAGAGACCCATGTGACATGATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR CCA 90 bp | AGTTCATTCCAGGAAAGTGGTGTAAACAGGTCTTTGCCATACATATaGCCTATGCCCACAGGACAGGAACAAGGTAGGGGGCACAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: SSFQESGVNRSLPYI*PMPTGQEQGRGHSN Trigger: GTTGCTGTGCCCCCTACCTTGTTCCTGTCCTGTGGGCATAGGCCATATGTATGGCAAAGACCTGTTTACACCACTTTCCTGGAATGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR GCA 90 bp | TTAGGCTGGAATGTGACTTGTGGGGAACACAAGCTATTGGAGTTATaGAGATGGTTCCCAGAGTTCACCAAGGCCGAGGGAGATTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: LGWNVTCGEHKLLEL*RWFPEFTKAEGDLS Trigger: AGACAAATCTCCCTCGGCCTTGGTGAACTCTGGGAACCATCTGCATAACTCCAATAGCTTGTGTTCCCCACAAGTCACATTCCAGCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR CCA 90 bp | TGGAATGTGACTTGTGGGGAACACAAGCTATTGGAGTTATGCAGATaGTTCCCAGAGTTCACCAAGGCCGAGGGAGATTTGTCTGGAAGT | + |
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Preference number: 1 (lower is better) Translates to: WNVTCGEHKLLELCR*FPEFTKAEGDLSGS Trigger: ACTTCCAGACAAATCTCCCTCGGCCTTGGTGAACTCTGGGAACCATCTGCATAACTCCAATAGCTTGTGTTCCCCACAAGTCACATTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR CCA 90 bp | CAGTGCCTTGGAGATAGACTACAGACTTCAATTCTTAGAGAAAGGTaGGCTAGTGGAGCACCTAAGTCAACGCTGAGGTACCAAGCTACA | + |
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Preference number: 1 (lower is better) Translates to: QCLGDRLQTSILRER*ASGAPKSTLRYQAT Trigger: TGTAGCTTGGTACCTCAGCGTTGACTTAGGTGCTCCACTAGCCCACCTTTCTCTAAGAATTGAAGTCTGTAGTCTATCTCCAAGGCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR TCA 90 bp | GTCCAAGGTCTTCTGTCTAGTGAACACAAACACAAAACATGCTGCTaGGAATCTGTCATGGGTCCATACGCAGGATTACCTACTGTCCAA | + |
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Preference number: 1 (lower is better) Translates to: VQGLLSSEHKHKTCC*ESVMGPYAGLPTVQ Trigger: TTGGACAGTAGGTAATCCTGCGTATGGACCCATGACAGATTCTCAGCAGCATGTTTTGTGTTTGTGTTCACTAGACAGAAGACCTTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR TCA 90 bp | TTAGGGAACTGTGAAGAAAAGAACCTGCTCAGGTTATCAAGGATCTaGTTTCAAATCTATCTGATAGCCAGTGGTGGCTGGAAGCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: LGNCEEKNLLRLSRI*FQIYLIASGGWKPG Trigger: GCCTGGCTTCCAGCCACCACTGGCTATCAGATAGATTTGAAATCAGATCCTTGATAACCTGAGCAGGTTCTTTTCTTCACAGTTCCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR CCA 90 bp | TGCCTTTCCTCCTGCTGTGAACATGCCAGAACCCAGAATGCACTATaGTGCTGTTCAAATACTCCCAAATGGCCTTTATTTCACCAAACT | + |
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Preference number: 1 (lower is better) Translates to: CLSSCCEHARTQNAL*CCSNTPKWPLFHQT Trigger: AGTTTGGTGAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTGGGTTCTGGCATGTTCACAGCAGGAGGAAAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR TCA 90 bp | TGTGAGAAATCAGGCCAAAACAGGAAAGTAACCTTCTCTGAACCTTaGTACCAGACTGCCAATAGCTGGTGGGAGAGAAAATCATGTCAC | + |
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Preference number: 1 (lower is better) Translates to: CEKSGQNRKVTFSEP*YQTANSWWERKSCH Trigger: GTGACATGATTTTCTCTCCCACCAGCTATTGGCAGTCTGGTATCAAGGTTCAGAGAAGGTTACTTTCCTGTTTTGGCCTGATTTCTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR GCA 90 bp | CTTTCCTCCTGCTGTGAACATGCCAGAACCCAGAATGCACTATGGTaGTGTTCAAATACTCCCAAATGGCCTTTATTTCACCAAACTGTT | + |
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Preference number: 1 (lower is better) Translates to: LSSCCEHARTQNALW*CSNTPKWPLFHQTV Trigger: AACAGTTTGGTGAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTGGGTTCTGGCATGTTCACAGCAGGAGGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR TCA 90 bp | AAATGCCTGAGAGAATCAGTCAAGTTCAAGGTTGTGTTAGATCACTaGCCCTACCTCCAGTGCCTTGGAGATAGACTACAGACTTCAATT | + |
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Preference number: 1 (lower is better) Translates to: KCLRESVKFKVVLDH*PYLQCLGDRLQTSI Trigger: AATTGAAGTCTGTAGTCTATCTCCAAGGCACTGGAGGTAGGGTCAGTGATCTAACACAACCTTGAACTTGACTGATTCTCTCAGGCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR TCA 90 bp | ATGGTGCCTGCAGCAAAGTATCTTTTTCTCCACCCCTTATATGTTTaGTTTCATCACACAAGTGTCCAAGGTCTTCTGTCTAGTGAACAC | + |
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Preference number: 1 (lower is better) Translates to: MVPAAKYLFLHPLYV*FHHTSVQGLLSSEH Trigger: GTGTTCACTAGACAGAAGACCTTGGACACTTGTGTGATGAAATCAAACATATAAGGGGTGGAGAAAAAGATACTTTGCTGCAGGCACCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR CCA 90 bp | CAAAACAACAACAACAAAGAGCAGGGTTACTGTTGTATATACATTTaGGGCCAATCTGATGAGAATACCCTCCAGCCCAAGGAATTGATA | + |
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Preference number: 1 (lower is better) Translates to: QNNNNKEQGYCCIYI*GQSDENTLQPKELI Trigger: TATCAATTCCTTGGGCTGGAGGGTATTCTCATCAGATTGGCCCCAAATGTATATACAACAGTAACCCTGCTCTTTGTTGTTGTTGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR-3UTR CCA 90 bp | GTTACAGCCAGGTGGTGGCGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGCAGGGCAGGGCCTCATaGGCCCAAGCAGATATAGCA | + |
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Preference number: 2 (lower is better) Translates to: VTARWWRCTPLIPALGRQQGRAS*AQADIA Trigger: TGCTATATCTGCTTGGGCCCATGAGGCCCTGCCCTG...CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCGCCACCACCTGGCTGTAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR-3UTR TCA 90 bp | GTAGCCTCAGGGCAGGGCCTCATGGGCCCAAGCAGATATAGCACAGAAATCAGCTCTCCCTGGCTGGCCTaGGGGGCATCTCCTTACCAA | + |
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Preference number: 2 (lower is better) Translates to: VASGQGLMGPSRYSTEISSPWLA*GASPYQ Trigger: TTGGTAAGGAGATGCCCCTCAGGCCAGCCAGGGAGA...GCTGATTTCTGTGCTATATCTGCTTGGGCCCATGAGGCCCTGCCCTGAGGCTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGCATCAAATCCAAGCACAGCAGTCAGATGGAAGGAGGACGGCTGGAAAGCTGGCCACGTCTGCCTaGTGCACCACACCTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: QQHQIQAQQSDGRRTAGKLATSA*CTTPAS Trigger: GGAGGCAGGTGTGGTGCAGCAGGCAGACGTGGCCAG...CTTTCCAGCCGTCCTCCTTCCATCTGACTGCTGTGCTTGGATTTGATGCTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGGCCTGGCCACGTCTGCCTaGTGCACCACACCTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: ERAFSQVSLVVHVASGQGLATSA*CTTPAS Trigger: GGAGGCAGGTGTGGTGCAGCAGGCAGACGTGGCCAG...GCCCTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR GCA 90 bp | ATGTCCTGGCTGAGTGCAGCATCAAACACCTCCATCCCCACCCAGTGTTTCTGCGGTACTGGCCACGTCTaGCTGCTGCACCACACCTGC | + |
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Preference number: 2 (lower is better) Translates to: MSWLSAASNTSIPTQCFCGTGHV*LLHHTC Trigger: GCAGGTGTGGTGCAGCAGGCAGACGTGGCCAGTACC...GCAGAAACACTGGGTGGGGATGGAGGTGTTTGATGCTGCACTCAGCCAGGACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR CCA 90 bp | GTAGCCTCAGGGCAGGGCCTCATGGGCCCAAGCAGATATAGCACAGAAATCAGCTTTGGGAGGGAGGGGTaGGAGGGTATGGTGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: VASGQGLMGPSRYSTEISFGREG*EGMVPA Trigger: TGCAGGCACCATACCCTCCCACCCCTCCCTCCCAAA...GCTGATTTCTGTGCTATATCTGCTTGGGCCCATGAGGCCCTGCCCTGAGGCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGCATCAAATCCAAGCACAGCAGTCAGATGGAAGGAGGACGGCTGGAAAGGGTACTGGCCACGTCTaGCTGCTGCACCACACCTGC | + |
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Preference number: 2 (lower is better) Translates to: QQHQIQAQQSDGRRTAGKGTGHV*LLHHTC Trigger: GCAGGTGTGGTGCAGCAGGCAGACGTGGCCAGTACC...CTTTCCAGCCGTCCTCCTTCCATCTGACTGCTGTGCTTGGATTTGATGCTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR GCA 90 bp | GTTACAGCCAGGTGGTGGCGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGTCAGTGGAATGCTTaGCTGGCAGACACAAGACCC | + |
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Preference number: 2 (lower is better) Translates to: VTARWWRCTPLIPALGRQSQWNA*LADTRP Trigger: GGGTCTTGTGTCTGCCAGGCAAGCATTCCACTGACT...CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCGCCACCACCTGGCTGTAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAGCTCAGAGGTACTGGCCACGTCTGCCTGCTGCACCACACCTGCCTCCTTGGGTGATGTACTCTTaGTGGCACTTAACGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: KPAQRYWPRLPAAPHLPPWVMYS*WHLTEG Trigger: ACCTTCCGTTAAGTGCCATCAAGAGTACATCACCCA...AGGAGGCAGGTGTGGTGCAGCAGGCAGACGTGGCCAGTACCTCTGAGCTGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR GCA 90 bp | GTTACAGCCAGGTGGTGGCGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGGAGCTCCATGAAGATTaGTGTGATTTGGGAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: VTARWWRCTPLIPALGRQELHED*CDLGGR Trigger: CCTCCCTCCCAAATCACAGCAATCTTCATGGAGCTC...CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCGCCACCACCTGGCTGTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR-3UTR TCA 90 bp | GTTACAGCCAGGTGGTGGCGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAATGAATGTCCTGGCTaGGTGCAGCATCAAACACCT | + |
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Preference number: 2 (lower is better) Translates to: VTARWWRCTPLIPALGRQNECPG*VQHQTP Trigger: AGGTGTTTGATGCTGCACTCAGCCAGGACATTCATT...CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCGCCACCACCTGGCTGTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR-3UTR GCA 90 bp | GTTACAGCCAGGTGGTGGCGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGCATACATATGGCCTATaGCCACAGGACAGGAACAAG | + |
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Preference number: 2 (lower is better) Translates to: VTARWWRCTPLIPALGRQHTYGL*PQDRNK Trigger: CTTGTTCCTGTCCTGTGGGCATAGGCCATATGTATG...CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCGCCACCACCTGGCTGTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR-3UTR GCA 90 bp | GTTACAGCCAGGTGGTGGCGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGTCTGGTGGAAAGAGATaGTGCATGGCTTCTGTACGT | + |
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Preference number: 2 (lower is better) Translates to: VTARWWRCTPLIPALGRQSGGKR*CMASVR Trigger: ACGTACAGAAGCCATGCAGCATCTCTTTCCACCAGA...CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCGCCACCACCTGGCTGTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR-3UTR CCA 90 bp | ATGTCCTGGCTGAGTGCAGCATCAAACACCTCCATCCCCACCCAGTGTTTCTGCAAGATTGCTGTGATTTaGGAGGGAGGGGTGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: MSWLSAASNTSIPTQCFCKIAVI*EGGVGG Trigger: CCCTCCCACCCCTCCCTCCCAAATCACAGCAATCTT...GCAGAAACACTGGGTGGGGATGGAGGTGTTTGATGCTGCACTCAGCCAGGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACAAGACCATAGCCAGTGGTGGCTaGAAGCCAGGCAGCAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: EAKDMAQSVECLPGRHKTIASGG*KPGSSD Trigger: ATCACTGCTGCCTGGCTTCCAGCCACCACTGGCTAT...GGTCTTGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR-3UTR TCA 90 bp | GTAGCCTCAGGGCAGGGCCTCATGGGCCCAAGCAGATATAGCACAGAAATCAGCTGCTGGAAGGATGAATaGATGTCCTGGCTGAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VASGQGLMGPSRYSTEISCWKDE*MSWLSA Trigger: TGCACTCAGCCAGGACATTCATTCATCCTTCCAGCA...GCTGATTTCTGTGCTATATCTGCTTGGGCCCATGAGGCCCTGCCCTGAGGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCAGGAAAGTGGTGTAAACAGGTCTTTGCCATACATATGGCCTATGCCCACACTGGCCACGTCTGCCTaGTGCACCACACCTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: FQESGVNRSLPYIWPMPTLATSA*CTTPAS Trigger: GGAGGCAGGTGTGGTGCAGCAGGCAGACGTGGCCAG...TGTGGGCATAGGCCATATGTATGGCAAAGACCTGTTTACACCACTTTCCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR CCA 90 bp | GTTACAGCCAGGTGGTGGCGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGATTCTTAGAGAAAGGTaGGCTAGTGGAGCACCTAAG | + |
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Preference number: 2 (lower is better) Translates to: VTARWWRCTPLIPALGRQILRER*ASGAPK Trigger: CTTAGGTGCTCCACTAGCCCACCTTTCTCTAAGAAT...CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCGCCACCACCTGGCTGTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR CAA 90 bp | TCACATGGGTCTCTGTATCAGGAGCTCCATGAAGATTGCTGTGATTaGGGAGGGAGGGGTGGGAGGGTATGGTGCCTGCAGCAAAGTATC | + |
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Preference number: 2 (lower is better) Translates to: SHGSLYQELHEDCCD*GGRGGRVWCLQQSI Trigger: GATACTTTGCTGCAGGCACCATACCCTCCCACCCCTCCCTCCCAAATCACAGCAATCTTCATGGAGCTCCTGATACAGAGACCCATGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR TCA 90 bp | GTTACAGCCAGGTGGTGGCGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGCTCAATAACTGCAGGTaGCTATTTCAAGCCAACTTG | + |
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Preference number: 2 (lower is better) Translates to: VTARWWRCTPLIPALGRQLNNCR*LFQANL Trigger: CAAGTTGGCTTGAAATAGTCACCTGCAGTTATTGAG...CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCGCCACCACCTGGCTGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR-3UTR TCA 90 bp | GAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACAAGACCGTTGTGTTAGATCACTaGCCCTACCTCCAGTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: EAKDMAQSVECLPGRHKTVVLDH*PYLQCL Trigger: AAGGCACTGGAGGTAGGGTCAGTGATCTAACACAAC...GGTCTTGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR-3UTR GCA 90 bp | ATGTCCTGGCTGAGTGCAGCATCAAACACCTCCATCCCCACCCAGTGTTTCTGCGGTGGGAGGGTATGGTaGCTGCAGCAAAGTATCTTT | + |
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Preference number: 2 (lower is better) Translates to: MSWLSAASNTSIPTQCFCGGRVW*LQQSIF Trigger: AAAGATACTTTGCTGCAGGCACCATACCCTCCCACC...GCAGAAACACTGGGTGGGGATGGAGGTGTTTGATGCTGCACTCAGCCAGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR GCA 90 bp | GTAGCCTCAGGGCAGGGCCTCATGGGCCCAAGCAGATATAGCACAGAAATCAGCCATACATATGGCCTATaGCCACAGGACAGGAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: VASGQGLMGPSRYSTEISHTYGL*PQDRNK Trigger: CTTGTTCCTGTCCTGTGGGCATAGGCCATATGTATG...GCTGATTTCTGTGCTATATCTGCTTGGGCCCATGAGGCCCTGCCCTGAGGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR GCA 90 bp | GTTACAGCCAGGTGGTGGCGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAAGCTATTGGAGTTATaGAGATGGTTCCCAGAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: VTARWWRCTPLIPALGRQKLLEL*RWFPEF Trigger: GAACTCTGGGAACCATCTGCATAACTCCAATAGCTT...CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCGCCACCACCTGGCTGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR CCA 90 bp | GCTGATACAGGAAAAACTACAAAGCTGAATGACGCCATCACAGGTTCCCTGAGGTTTGGGAGGGAGGGGTaGGAGGGTATGGTGCCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: ADTGKTTKLNDAITGSLRFGREG*EGMVPA Trigger: TGCAGGCACCATACCCTCCCACCCCTCCCTCCCAAA...CCTCAGGGAACCTGTGATGGCGTCATTCAGCTTTGTAGTTTTTCCTGTATCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTTTTGGGAGGGAGGGGTaGGAGGGTATGGTGCCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: TACVFTSLRAELQPGGGGFGREG*EGMVPA Trigger: TGCAGGCACCATACCCTCCCACCCCTCCCTCCCAAA...ACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGGCGTTGTGTTAGATCACTaGCCCTACCTCCAGTGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: ERAFSQVSLVVHVASGQGVVLDH*PYLQCL Trigger: AAGGCACTGGAGGTAGGGTCAGTGATCTAACACAAC...GCCCTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CCA 90 bp | GTAGCCTCAGGGCAGGGCCTCATGGGCCCAAGCAGATATAGCACAGAAATCAGCATTCTTAGAGAAAGGTaGGCTAGTGGAGCACCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: VASGQGLMGPSRYSTEISILRER*ASGAPK Trigger: CTTAGGTGCTCCACTAGCCCACCTTTCTCTAAGAAT...GCTGATTTCTGTGCTATATCTGCTTGGGCCCATGAGGCCCTGCCCTGAGGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR CAA 90 bp | CTGAGACACTTAGGCTGGAATGTGACTTGTGGGGAACACAAGCTATaGGAGTTATGCAGATGGTTCCCAGAGTTCACCAAGGCCGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LRHLGWNVTCGEHKL*ELCRWFPEFTKAEG Trigger: TCCCTCGGCCTTGGTGAACTCTGGGAACCATCTGCATAACTCCAATAGCTTGTGTTCCCCACAAGTCACATTCCAGCCTAAGTGTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGGCCAGTGTTTCTGCCTGTaGGAAATCAGGCCAAAACAG | + |
|
Preference number: 2 (lower is better) Translates to: ERAFSQVSLVVHVASGQGQCFCL*EIRPKQ Trigger: CTGTTTTGGCCTGATTTCTCACAGGCAGAAACACTG...GCCCTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGTGCTGGAAGGATGAATaGATGTCCTGGCTGAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VCVLPTITQVVLRAGTPVCWKDE*MSWLSA Trigger: TGCACTCAGCCAGGACATTCATTCATCCTTCCAGCA...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGGCAACTACAAAGCTGAATaGCGCCATCACAGGTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: ERAFSQVSLVVHVASGQGNYKAE*RHHRFP Trigger: AGGGAACCTGTGATGGCGTCATTCAGCTTTGTAGTT...GCCCTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR TCA 90 bp | GTAGCCTCAGGGCAGGGCCTCATGGGCCCAAGCAGATATAGCACAGAAATCAGCGAAAAACTACAAAGCTaGATGACGCCATCACAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: VASGQGLMGPSRYSTEISEKLQS*MTPSQV Trigger: AACCTGTGATGGCGTCATTCAGCTTTGTAGTTTTTC...GCTGATTTCTGTGCTATATCTGCTTGGGCCCATGAGGCCCTGCCCTGAGGCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACAAGACCTCAGTTAGGGAACTGTaGAGAAAAGAACCTGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: EAKDMAQSVECLPGRHKTSVREL*RKEPAQ Trigger: CTGAGCAGGTTCTTTTCTTCACAGTTCCCTAACTGA...GGTCTTGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGGAGCTCCATGAAGATTaGTGTGATTTGGGAGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: VCVLPTITQVVLRAGTPVELHED*CDLGGR Trigger: CCTCCCTCCCAAATCACAGCAATCTTCATGGAGCTC...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACAAGACCTGTCTTGACTGCTGTTaGTCAGAACTCACTGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: EAKDMAQSVECLPGRHKTCLDCC*SELTGF Trigger: GAAACCAGTGAGTTCTGACCAACAGCAGTCAAGACA...GGTCTTGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGTCCTGGCTGAGTGCAGCATCAAACACCTCCATCCCCACCCAGTGTTTCTGCCTCAATAACTGCAGGTaGCTATTTCAAGCCAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: MSWLSAASNTSIPTQCFCLNNCR*LFQANL Trigger: CAAGTTGGCTTGAAATAGTCACCTGCAGTTATTGAG...GCAGAAACACTGGGTGGGGATGGAGGTGTTTGATGCTGCACTCAGCCAGGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGAACTACAAAGCTGAATaGCGCCATCACAGGTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: VCVLPTITQVVLRAGTPVNYKAE*RHHRFP Trigger: AGGGAACCTGTGATGGCGTCATTCAGCTTTGTAGTT...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTGAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGGTGGGAGGGTATGGTaGCTGCAGCAAAGTATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SERAFSQVSLVVHVASGQGGRVW*LQQSIF Trigger: AAAGATACTTTGCTGCAGGCACCATACCCTCCCACC...CTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACAAGACCAAGCTATTGGAGTTATaGAGATGGTTCCCAGAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: EAKDMAQSVECLPGRHKTKLLEL*RWFPEF Trigger: GAACTCTGGGAACCATCTGCATAACTCCAATAGCTT...GGTCTTGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTGCTCAGTCAGTGGAATaGTTGCCTGGCAGACACAAG | + |
|
Preference number: 2 (lower is better) Translates to: TACVFTSLRAELQPGGGGAQSVE*LPGRHK Trigger: CTTGTGTCTGCCAGGCAAGCATTCCACTGACTGAGC...ACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGATACAGGAAAAACTACAAAGCTGAATGACGCCATCACAGGTTCCCTGAGGAGCACAGCAGTCAGATaGAAGGAGGACGGCTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: ADTGKTTKLNDAITGSLRSTAVR*KEDGWK Trigger: TTTCCAGCCGTCCTCCTTCCATCTGACTGCTGTGCT...CCTCAGGGAACCTGTGATGGCGTCATTCAGCTTTGTAGTTTTTCCTGTATCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR CCA 90 bp | ATGTCACATGGGTCTCTGTATCAGGAGCTCCATGAAGATTGCTGTGATTTGGGAAGGGGTGGGAGGGTATaGTGCCTGCAGCAAAGTATC | + |
|
Preference number: 2 (lower is better) Translates to: MSHGSLYQELHEDCCDLGRGGRV*CLQQSI Trigger: GATACTTTGCTGCAGGCACCATACCCTCCCACCCCT...TCCCAAATCACAGCAATCTTCATGGAGCTCCTGATACAGAGACCCATGTGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGGAAAGTGGTGTAAACAGGTCTTTGCCATACATATGGCCTATGCCCACAAAGATTGCTGTGATTTaGGAGGGAGGGGTGGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: FQESGVNRSLPYIWPMPTKIAVI*EGGVGG Trigger: CCCTCCCACCCCTCCCTCCCAAATCACAGCAATCTT...TGTGGGCATAGGCCATATGTATGGCAAAGACCTGTTTACACCACTTTCCTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTTTTAATCCCAGCACTTaGGAGGCAGAGGCAGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: TACVFTSLRAELQPGGGGFNPST*EAEAEA Trigger: TGCCTCTGCCTCTGCCTCCCAAGTGCTGGGATTAAA...ACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGATACAGGAAAAACTACAAAGCTGAATGACGCCATCACAGGTTCCCTGAGGTGCTGGAAGGATGAATaGATGTCCTGGCTGAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: ADTGKTTKLNDAITGSLRCWKDE*MSWLSA Trigger: TGCACTCAGCCAGGACATTCATTCATCCTTCCAGCA...CCTCAGGGAACCTGTGATGGCGTCATTCAGCTTTGTAGTTTTTCCTGTATCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGGGAGGGTATGGTGCCTaGAGCAAAGTATCTTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VCVLPTITQVVLRAGTPVGGYGA*SKVSFS Trigger: AGAAAAAGATACTTTGCTGCAGGCACCATACCCTCC...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGGCCAAGCTGGTAAGAAATaGCTGAGAGAATCAGTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: ERAFSQVSLVVHVASGQGQAGKK*LRESVK Trigger: CTTGACTGATTCTCTCAGGCATTTCTTACCAGCTTG...GCCCTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGGAAAGTGGTGTAAACAGGTCTTTGCCATACATATGGCCTATGCCCACAAGCACAGCAGTCAGATaGAAGGAGGACGGCTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: FQESGVNRSLPYIWPMPTSTAVR*KEDGWK Trigger: TTTCCAGCCGTCCTCCTTCCATCTGACTGCTGTGCT...TGTGGGCATAGGCCATATGTATGGCAAAGACCTGTTTACACCACTTTCCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGGCTTCATTCCAGGAAAGTaGTGTAAACAGGTCTTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: ERAFSQVSLVVHVASGQGFIPGK*CKQVFA Trigger: GGCAAAGACCTGTTTACACCACTTTCCTGGAATGAA...GCCCTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGTTGGAGTTATGCAGATaGTTCCCAGAGTTCACCAAG | + |
|
Preference number: 2 (lower is better) Translates to: VCVLPTITQVVLRAGTPVLELCR*FPEFTK Trigger: CTTGGTGAACTCTGGGAACCATCTGCATAACTCCAA...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGATTCTTAGAGAAAGGTaGGCTAGTGGAGCACCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: VCVLPTITQVVLRAGTPVILRER*ASGAPK Trigger: CTTAGGTGCTCCACTAGCCCACCTTTCTCTAAGAAT...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR CAA 90 bp | GAAAGAGATGCTGCATGGCTTCTGTACGTTGCCTGTGATCTTGGCTaGTGGCCTTTTCCTTCCCAAGTGTCTTCCACACTAAATCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: ERDAAWLLYVACDLG*WPFPSQVSSTLNLL Trigger: CAGAAGATTTAGTGTGGAAGACACTTGGGAAGGAAAAGGCCACAAGCCAAGATCACAGGCAACGTACAGAAGCCATGCAGCATCTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTGATACAGGAAAAACTACAAAGCTGAATGACGCCATCACAGGTTCCCTGAGGTGGGTGATGTACTCTTaGTGGCACTTAACGGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: ADTGKTTKLNDAITGSLRWVMYS*WHLTEG Trigger: ACCTTCCGTTAAGTGCCATCAAGAGTACATCACCCA...CCTCAGGGAACCTGTGATGGCGTCATTCAGCTTTGTAGTTTTTCCTGTATCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTGATACAGGAAAAACTACAAAGCTGAATGACGCCATCACAGGTTCCCTGAGGAATGAATGTCCTGGCTaGGTGCAGCATCAAACACCT | + |
|
Preference number: 2 (lower is better) Translates to: ADTGKTTKLNDAITGSLRNECPG*VQHQTP Trigger: AGGTGTTTGATGCTGCACTCAGCCAGGACATTCATT...CCTCAGGGAACCTGTGATGGCGTCATTCAGCTTTGTAGTTTTTCCTGTATCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGGAAAAACTACAAAGCTaGATGACGCCATCACAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: VCVLPTITQVVLRAGTPVEKLQS*MTPSQV Trigger: AACCTGTGATGGCGTCATTCAGCTTTGTAGTTTTTC...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGCTGGTAAGAAATGCCTaGGAGAATCAGTCAAGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: VCVLPTITQVVLRAGTPVLVRNA*ENQSSS Trigger: TGAACTTGACTGATTCTCTCAGGCATTTCTTACCAG...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCGCACAGCAACACCTCTaGTGCCCATTTGGCAGTACT | + |
|
Preference number: 2 (lower is better) Translates to: RILLKCHQAGKKCLRESVAQQHL*CPFGST Trigger: AGTACTGCCAAATGGGCAGCAGAGGTGTTGCTGTGC...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTCATACATATGGCCTATaGCCACAGGACAGGAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: TACVFTSLRAELQPGGGGHTYGL*PQDRNK Trigger: CTTGTTCCTGTCCTGTGGGCATAGGCCATATGTATG...ACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCAGCACAGCAGTCAGATaGAAGGAGGACGGCTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RILLKCHQAGKKCLRESVSTAVR*KEDGWK Trigger: TTTCCAGCCGTCCTCCTTCCATCTGACTGCTGTGCT...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGTTTTCTCCCATCTCTaGAATGCTGGGAATTGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: SERAFSQVSLVVHVASGQVFSHL*NAGNCL Trigger: GAGACAATTCCCAGCATTCCAGAGATGGGAGAAAAC...CTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACAAGACCGATTTTGGTGACTGTTaGACAAGGATATTGCTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: EAKDMAQSVECLPGRHKTDFGDC*TRILLK Trigger: CTTAAGCAATATCCTTGTCCAACAGTCACCAAAATC...GGTCTTGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCTGCTGGAAGGATGAATaGATGTCCTGGCTGAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: RILLKCHQAGKKCLRESVCWKDE*MSWLSA Trigger: TGCACTCAGCCAGGACATTCATTCATCCTTCCAGCA...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR GCA 90 bp | CACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCAAGTTCAAGGTTGTGTTAGCACAGCAACACCTCTaGTGCCCATTTGGCAGTACT | + |
|
Preference number: 2 (lower is better) Translates to: HQAGKKCLRESVKFKVVLAQQHL*CPFGST Trigger: AGTACTGCCAAATGGGCAGCAGAGGTGTTGCTGTGC...TAACACAACCTTGAACTTGACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGTTCATTCCAGGAAAGTaGTGTAAACAGGTCTTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: SERAFSQVSLVVHVASGQFIPGK*CKQVFA Trigger: GGCAAAGACCTGTTTACACCACTTTCCTGGAATGAA...CTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGGCTAAGAAAAAGATCTaGCTCTCACACTTTGATGAC | + |
|
Preference number: 2 (lower is better) Translates to: VCVLPTITQVVLRAGTPVAKKKI*LSHFDD Trigger: GTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGC...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTTTCTGCACTGATAATTaGGTGACTCTGGGTGATGTA | + |
|
Preference number: 2 (lower is better) Translates to: TACVFTSLRAELQPGGGGFCTDN*VTLGDV Trigger: TACATCACCCAGAGTCACTCAATTATCAGTGCAGAA...ACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCAATGAATGTCCTGGCTaGGTGCAGCATCAAACACCT | + |
|
Preference number: 2 (lower is better) Translates to: RILLKCHQAGKKCLRESVNECPG*VQHQTP Trigger: AGGTGTTTGATGCTGCACTCAGCCAGGACATTCATT...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCCAGGAAAGTGGTGTAAACAGGTCTTTGCCATACATATGGCCTATGCCCACAGGAGGGTATGGTGCCTaGAGCAAAGTATCTTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: FQESGVNRSLPYIWPMPTGGYGA*SKVSFS Trigger: AGAAAAAGATACTTTGCTGCAGGCACCATACCCTCC...TGTGGGCATAGGCCATATGTATGGCAAAGACCTGTTTACACCACTTTCCTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAGGTATGTGTAACAGCTAAGAAAAAGATCTGGCTCTCACACTTTGATGACGCACAGCAACACCTCTaGTGCCCATTTGGCAGTACT | + |
|
Preference number: 2 (lower is better) Translates to: TEVCVTAKKKIWLSHFDDAQQHL*CPFGST Trigger: AGTACTGCCAAATGGGCAGCAGAGGTGTTGCTGTGC...GTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGCTGTTACACATACCTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CCA 90 bp | ACTGAGGTATGTGTAACAGCTAAGAAAAAGATCTGGCTCTCACACTTTGATGACAGCACAGCAGTCAGATaGAAGGAGGACGGCTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: TEVCVTAKKKIWLSHFDDSTAVR*KEDGWK Trigger: TTTCCAGCCGTCCTCCTTCCATCTGACTGCTGTGCT...GTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGCTGTTACACATACCTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGCTAAGAAAAAGATCTaGCTCTCACACTTTGATGAC | + |
|
Preference number: 2 (lower is better) Translates to: SERAFSQVSLVVHVASGQAKKKI*LSHFDD Trigger: GTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGC...CTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAGGAAAGTGGTGTAAACAGGTCTTTGCCATACATATGGCCTATGCCCACATTCTGCACTGATAATTaGGTGACTCTGGGTGATGTA | + |
|
Preference number: 2 (lower is better) Translates to: FQESGVNRSLPYIWPMPTFCTDN*VTLGDV Trigger: TACATCACCCAGAGTCACTCAATTATCAGTGCAGAA...TGTGGGCATAGGCCATATGTATGGCAAAGACCTGTTTACACCACTTTCCTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAGGTATGTGTAACAGCTAAGAAAAAGATCTGGCTCTCACACTTTGATGACGGTGGGAGGGTATGGTaGCTGCAGCAAAGTATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: TEVCVTAKKKIWLSHFDDGGRVW*LQQSIF Trigger: AAAGATACTTTGCTGCAGGCACCATACCCTCCCACC...GTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGCTGTTACACATACCTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCTTCTGCACTGATAATTaGGTGACTCTGGGTGATGTA | + |
|
Preference number: 2 (lower is better) Translates to: RILLKCHQAGKKCLRESVFCTDN*VTLGDV Trigger: TACATCACCCAGAGTCACTCAATTATCAGTGCAGAA...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTGAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGCAACTGATCAAGAAATaGAGTTTGAAGAACAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: SERAFSQVSLVVHVASGQQLIKK*SLKNKT Trigger: TGTCTTGTTCTTCAAACTGCATTTCTTGATCAGTTG...CTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTGATTTTGGTGACTGTTaGACAAGGATATTGCTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: TACVFTSLRAELQPGGGGDFGDC*TRILLK Trigger: CTTAAGCAATATCCTTGTCCAACAGTCACCAAAATC...ACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR CAA 90 bp | AGCACAGAAATCAGCTCAAGCACAAGTGTTAAGAATCATGAGATTTaGGTGACTGTTGGACAAGGATATTGCTTAAGTGCCACCAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: STEISSSTSVKNHEI*VTVGQGYCLSATKL Trigger: CAGCTTGGTGGCACTTAAGCAATATCCTTGTCCAACAGTCACCAAAATCTCATGATTCTTAACACTTGTGCTTGAGCTGATTTCTGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR TCA 90 bp | ACTGAGGTATGTGTAACAGCTAAGAAAAAGATCTGGCTCTCACACTTTGATGACCTCAATAACTGCAGGTaGCTATTTCAAGCCAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: TEVCVTAKKKIWLSHFDDLNNCR*LFQANL Trigger: CAAGTTGGCTTGAAATAGTCACCTGCAGTTATTGAG...GTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGCTGTTACACATACCTCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CCA 90 bp | CACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCAAGTTCAAGGTTGTGTTAGCTAAGAAAAAGATCTaGCTCTCACACTTTGATGAC | + |
|
Preference number: 2 (lower is better) Translates to: HQAGKKCLRESVKFKVVLAKKKI*LSHFDD Trigger: GTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGC...TAACACAACCTTGAACTTGACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTACTCAATAACTGCAGGTaGCTATTTCAAGCCAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: FIPELDRDENSTHSIISVLNNCR*LFQANL Trigger: CAAGTTGGCTTGAAATAGTCACCTGCAGTTATTGAG...TACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAGGTATGTGTAACAGCTAAGAAAAAGATCTGGCTCTCACACTTTGATGACGAAGGAAAACAAACTTaGAAGTCATGGCATATCACT | + |
|
Preference number: 2 (lower is better) Translates to: TEVCVTAKKKIWLSHFDDEGKQT*KSWHIT Trigger: AGTGATATGCCATGACTTGCAAGTTTGTTTTCCTTC...GTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGCTGTTACACATACCTCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR TCA 90 bp | TTATTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTCTCAATAACTGCAGGTaGCTATTTCAAGCCAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: LFIPELDRDENSTHSIISLNNCR*LFQANL Trigger: CAAGTTGGCTTGAAATAGTCACCTGCAGTTATTGAG...ACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAACAATGCAAGGACAACTGATCAAGAAATaGAGTTTGAAGAACAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: LDRDENSTHSIISVTMQGQLIKK*SLKNKT Trigger: TGTCTTGTTCTTCAAACTGCATTTCTTGATCAGTTG...TCCTTGCATTGTTACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTACAACTGATCAAGAAATaGAGTTTGAAGAACAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: FIPELDRDENSTHSIISVQLIKK*SLKNKT Trigger: TGTCTTGTTCTTCAAACTGCATTTCTTGATCAGTTG...TACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR GCA 90 bp | TTATTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTCAACTGATCAAGAAATaGAGTTTGAAGAACAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: LFIPELDRDENSTHSIISQLIKK*SLKNKT Trigger: TGTCTTGTTCTTCAAACTGCATTTCTTGATCAGTTG...ACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAATAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR GCA 72 bp | GGCACAGCAACACCTCTGCTGCCCATTTGGCAGTACTaGACACCTCACCCTCTCCCTGGCTGGCCTGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GTATPLLPIWQY*TPHPLPGWPEG Trigger: CCCCTCAGGCCAGCCAGGGAGAGGGTGAGGTGTGCAGTACTGCCAAATGGGCAGCAGAGGTGTTGCTGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR CCA 72 bp | AGGAGGACGGCTGGAAAGAAGCCAGCTCAGAGGTACTaGCCACGTCTGCCTGCTGCACCACACCTGCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RRTAGKKPAQRY*PRLPAAPHLPP Trigger: AGGAGGCAGGTGTGGTGCAGCAGGCAGACGTGGCCAGTACCTCTGAGCTGGCTTCTTTCCAGCCGTCCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTACAGCCAGGTGGTGGCGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGGAAGATTGCTGTGATTaGGGAGGGAGGGGTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VTARWWRCTPLIPALGRQEDCCD*GGRGGR Trigger: CCTCCCACCCCTCCCTCCCAAATCACAGCAATCTTC...CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCGCCACCACCTGGCTGTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTACAGCCAGGTGGTGGCGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGTCTGGCTCTCACACTTaGATGACAGCTTCCAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VTARWWRCTPLIPALGRQSGSHT*MTASKA Trigger: TGCCTTGGAAGCTGTCATCAAAGTGTGAGAGCCAGA...CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCGCCACCACCTGGCTGTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR CCA 72 bp | CTCTGTATCAGGAGCTCCATGAAGATTGCTGTGATTTaGGAGGGAGGGGTGGGAGGGTATGGTGCCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LCIRSSMKIAVI*EGGVGGYGACS Trigger: GCTGCAGGCACCATACCCTCCCACCCCTCCCTCCCAAATCACAGCAATCTTCATGGAGCTCCTGATACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR TCA 72 bp | GATGACGGTGCTGGAAGGATGAATGAATGTCCTGGCTaGGTGCAGCATCAAACACCTCCATCCCCACCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: DDGAGRMNECPG*VQHQTPPSPPS Trigger: ACTGGGTGGGGATGGAGGTGTTTGATGCTGCACTCAGCCAGGACATTCATTCATCCTTCCAGCACCGTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR TCA 72 bp | GCACTTGGGAGGCAGAGGCAGAGGCAGGTGGATTTCTaGGTTCAAGGTCAGGTTGGTCTACAGAGTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ALGRQRQRQVDF*VQGQVGLQSEF Trigger: GAACTCACTCTGTAGACCAACCTGACCTTGAACTCAGAAATCCACCTGCCTCTGCCTCTGCCTCCCAAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR GCA 72 bp | AGAGGTACTGGCCACGTCTGCCTGCTGCACCACACCTaGCTCCTGATAAGGGAGAAGGAAAACAAACTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RGTGHVCLLHHT*LLIREKENKLA Trigger: TGCAAGTTTGTTTTCCTTCTCCCTTATCAGGAGGCAGGTGTGGTGCAGCAGGCAGACGTGGCCAGTACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR GCA 72 bp | TCACATGGGTCTCTGTATCAGGAGCTCCATGAAGATTaGTGTGATTTGGGAGGGAGGGGTGGGAGGGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: SHGSLYQELHED*CDLGGRGGRVW Trigger: CCATACCCTCCCACCCCTCCCTCCCAAATCACAGCAATCTTCATGGAGCTCCTGATACAGAGACCCATGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGACCTCTGCTGCCCATTaGGCAGTACTGCACACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VCVLPTITQVVLRAGTPVTSAAH*AVLHTS Trigger: TGAGGTGTGCAGTACTGCCAAATGGGCAGCAGAGGT...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR CCA 72 bp | AAGGCTGCCCAGGATAACAGCATAAGCAGCTTACACTaGCCTGGGGAATTCCCACTGCTTGTGTTAACCTCG | + |
|
Preference number: 3 (lower is better) Translates to: KAAQDNSISSLH*PGEFPLLVLTS Trigger: CGAGGTTAACACAAGCAGTGGGAATTCCCCAGGCCAGTGTAAGCTGCTTATGCTGTTATCCTGGGCAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR TCA 72 bp | GGAAAGAGATGCTGCATGGCTTCTGTACGTTGCCTGTaGTCTTGGCTTGTGGCCTTTTCCTTCCCAAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GKRCCMASVRCL*SWLVAFSFPSV Trigger: GACACTTGGGAAGGAAAAGGCCACAAGCCAAGATCACAGGCAACGTACAGAAGCCATGCAGCATCTCTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR CCA 72 bp | CAGGAAAGTGGTGTAAACAGGTCTTTGCCATACATATaGCCTATGCCCACAGGACAGGAACAAGGTAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QESGVNRSLPYI*PMPTGQEQGRG Trigger: CCCCCTACCTTGTTCCTGTCCTGTGGGCATAGGCCATATGTATGGCAAAGACCTGTTTACACCACTTTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCGAAGATTGCTGTGATTaGGGAGGGAGGGGTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RILLKCHQAGKKCLRESVEDCCD*GGRGGR Trigger: CCTCCCACCCCTCCCTCCCAAATCACAGCAATCTTC...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGAGGCTGGAATGTGACTaGTGGGGAACACAAGCTATT | + |
|
Preference number: 3 (lower is better) Translates to: VCVLPTITQVVLRAGTPVRLECD*WGTQAI Trigger: AATAGCTTGTGTTCCCCACAAGTCACATTCCAGCCT...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR GCA 72 bp | AATGTGACTTGTGGGGAACACAAGCTATTGGAGTTATaGAGATGGTTCCCAGAGTTCACCAAGGCCGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: NVTCGEHKLLEL*RWFPEFTKAEG Trigger: TCCCTCGGCCTTGGTGAACTCTGGGAACCATCTGCATAACTCCAATAGCTTGTGTTCCCCACAAGTCACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR CCA 72 bp | TCTTTTGTGGGTACTCTGGTGGAAAGAGATGCTGCATaGCTTCTGTACGTTGCCTGTGATCTTGGCTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SFVGTLVERDAA*LLYVACDLGLW Trigger: CCACAAGCCAAGATCACAGGCAACGTACAGAAGCCATGCAGCATCTCTTTCCACCAGAGTACCCACAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTATCAGGAGCTCCATGAAGATTGCTGTGATTTGGGAGGGAGGGGTGGGAGGGAGAAGGAAAACAAACTaGCAAGTCATGGCATATCAC | + |
|
Preference number: 3 (lower is better) Translates to: CIRSSMKIAVIWEGGVGGRRKTN*QVMAYH Trigger: GTGATATGCCATGACTTGCAAGTTTGTTTTCCTTCT...CCCTCCCACCCCTCCCTCCCAAATCACAGCAATCTTCATGGAGCTCCTGATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCACCTCTGCTGCCCATTaGGCAGTACTGCACACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RILLKCHQAGKKCLRESVTSAAH*AVLHTS Trigger: TGAGGTGTGCAGTACTGCCAAATGGGCAGCAGAGGT...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGGGGAACACAAGCTATaGGAGTTATGCAGATGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SERAFSQVSLVVHVASGQGEHKL*ELCRWF Trigger: GAACCATCTGCATAACTCCAATAGCTTGTGTTCCCC...CTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR TCA 72 bp | TCAAACACCTCCATCCCCACCCAGTGTTTCTGCCTGTaGGAAATCAGGCCAAAACAGGAAAGTAACCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SNTSIPTQCFCL*EIRPKQESNLL Trigger: GAGAAGGTTACTTTCCTGTTTTGGCCTGATTTCTCACAGGCAGAAACACTGGGTGGGGATGGAGGTGTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR CCA 72 bp | GCATGGCTTCTGTACGTTGCCTGTGATCTTGGCTTGTaGCCTTTTCCTTCCCAAGTGTCTTCCACACTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: AWLLYVACDLGL*PFPSQVSSTLN Trigger: ATTTAGTGTGGAAGACACTTGGGAAGGAAAAGGCCACAAGCCAAGATCACAGGCAACGTACAGAAGCCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACAAGACCAGATTTGTCTGGAAGTaGACTCAAATGCAGAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: EAKDMAQSVECLPGRHKTRFVWK*TQMQNS Trigger: AGAATTCTGCATTTGAGTCAACTTCCAGACAAATCT...GGTCTTGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGGCAAGAATCATGAGATTTaGGTGACTGTTGGACAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ERAFSQVSLVVHVASGQGKNHEI*VTVGQG Trigger: TCCTTGTCCAACAGTCACCAAAATCTCATGATTCTT...GCCCTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAGGTATGTGTAACAGCTAAGAAAAAGATCTGGCTCTCACACTTTGATGACACCTCTGCTGCCCATTaGGCAGTACTGCACACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TEVCVTAKKKIWLSHFDDTSAAH*AVLHTS Trigger: TGAGGTGTGCAGTACTGCCAAATGGGCAGCAGAGGT...GTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGCTGTTACACATACCTCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR TCA 72 bp | ATACCTTTAATCCTAGCACTCCAGGAGGCAGACAGGTaGATCGCTGTGACTTTTAAGGCTAGCATGGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: IPLILALQEADR*IAVTFKASMVW Trigger: CCATACCATGCTAGCCTTAAAAGTCACAGCGATTCACCTGTCTGCCTCCTGGAGTGCTAGGATTAAAGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR CCA 72 bp | GGAGATAGACTACAGACTTCAATTCTTAGAGAAAGGTaGGCTAGTGGAGCACCTAAGTCAACGCTGAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: GDRLQTSILRER*ASGAPKSTLRY Trigger: GTACCTCAGCGTTGACTTAGGTGCTCCACTAGCCCACCTTTCTCTAAGAATTGAAGTCTGTAGTCTATCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR CCA 72 bp | AGTGACTTCCTGTGGTTTTACTGTCTTGACTGCTGTTaGTCAGAACTCACTGGTTTCTCTGGGCTAGGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SDFLWFYCLDCC*SELTGFSGLGQ Trigger: TTGACCTAGCCCAGAGAAACCAGTGAGTTCTGACCAACAGCAGTCAAGACAGTAAAACCACAGGAAGTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCAGGCTGGAATGTGACTaGTGGGGAACACAAGCTATT | + |
|
Preference number: 3 (lower is better) Translates to: RILLKCHQAGKKCLRESVRLECD*WGTQAI Trigger: AATAGCTTGTGTTCCCCACAAGTCACATTCCAGCCT...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CAA 90 bp | CACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCAAGTTCAAGGTTGTGTTATCTGGCTCTCACACTTaGATGACAGCTTCCAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HQAGKKCLRESVKFKVVLSGSHT*MTASKA Trigger: TGCCTTGGAAGCTGTCATCAAAGTGTGAGAGCCAGA...TAACACAACCTTGAACTTGACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR TCA 72 bp | AGAGAATCAGTCAAGTTCAAGGTTGTGTTAGATCACTaGCCCTACCTCCAGTGCCTTGGAGATAGACTACAG | + |
|
Preference number: 3 (lower is better) Translates to: RESVKFKVVLDH*PYLQCLGDRLQ Trigger: CTGTAGTCTATCTCCAAGGCACTGGAGGTAGGGTCAGTGATCTAACACAACCTTGAACTTGACTGATTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR CCA 72 bp | CATGTGCAAGTTTTTGATGAGCTGAGACACTTAGGCTaGAATGTGACTTGTGGGGAACACAAGCTATTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: HVQVFDELRHLG*NVTCGEHKLLE Trigger: CTCCAATAGCTTGTGTTCCCCACAAGTCACATTCCAGCCTAAGTGTCTCAGCTCATCAAAAACTTGCACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CAA 90 bp | CACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCAAGTTCAAGGTTGTGTTAGGGGAACACAAGCTATaGGAGTTATGCAGATGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: HQAGKKCLRESVKFKVVLGEHKL*ELCRWF Trigger: GAACCATCTGCATAACTCCAATAGCTTGTGTTCCCC...TAACACAACCTTGAACTTGACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR TCA 72 bp | CTTCTGTCTAGTGAACACAAACACAAAACATGCTGCTaGGAATCTGTCATGGGTCCATACGCAGGATTACCT | + |
|
Preference number: 3 (lower is better) Translates to: LLSSEHKHKTCC*ESVMGPYAGLP Trigger: AGGTAATCCTGCGTATGGACCCATGACAGATTCTCAGCAGCATGTTTTGTGTTTGTGTTCACTAGACAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR GCA 72 bp | TGCTGTGAACATGCCAGAACCCAGAATGCACTATGGTaGTGTTCAAATACTCCCAAATGGCCTTTATTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: CCEHARTQNALW*CSNTPKWPLFH Trigger: GTGAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTGGGTTCTGGCATGTTCACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR CCA 72 bp | TCCTGCTGTGAACATGCCAGAACCCAGAATGCACTATaGTGCTGTTCAAATACTCCCAAATGGCCTTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: SCCEHARTQNAL*CCSNTPKWPLF Trigger: AAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTGGGTTCTGGCATGTTCACAGCAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTTATTTATCCCTGAACTaGATAGAGATGAGAACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TACVFTSLRAELQPGGGGYLSLN*IEMRTA Trigger: TGCTGTTCTCATCTCTATCAAGTTCAGGGATAAATA...ACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGGAAAGTGGTGTAAACAGGTCTTTGCCATACATATGGCCTATGCCCACAAGAAGGAAAACAAACTaGCAAGTCATGGCATATCAC | + |
|
Preference number: 3 (lower is better) Translates to: FQESGVNRSLPYIWPMPTRRKTN*QVMAYH Trigger: GTGATATGCCATGACTTGCAAGTTTGTTTTCCTTCT...TGTGGGCATAGGCCATATGTATGGCAAAGACCTGTTTACACCACTTTCCTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR TCA 72 bp | AGTCATGGCATATCACTTGCTTTCTGCACTGATAATTaGGTGACTCTGGGTGATGTACTCTTGATGGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: SHGISLAFCTDN*VTLGDVLLMAL Trigger: AAGTGCCATCAAGAGTACATCACCCAGAGTCACTCAATTATCAGTGCAGAAAGCAAGTGATATGCCATGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR TCA 72 bp | TGTCTGGAAGTTGACTCAAATGCAGAATTCTGCCATTaGCGTGACTGGAAGTGGTCTTTTCTGAATCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CLEVDSNAEFCH*RDWKWSFLNLE Trigger: CTCAAGATTCAGAAAAGACCACTTCCAGTCACGTCAATGGCAGAATTCTGCATTTGAGTCAACTTCCAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR TCA 72 bp | TGTGAAGAAAAGAACCTGCTCAGGTTATCAAGGATCTaGTTTCAAATCTATCTGATAGCCAGTGGTGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CEEKNLLRLSRI*FQIYLIASGGW Trigger: CCAGCCACCACTGGCTATCAGATAGATTTGAAATCAGATCCTTGATAACCTGAGCAGGTTCTTTTCTTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR GCA 72 bp | GATTTTGGTGACTGTTGGACAAGGATATTGCTTAAGTaGCACCAAGCTGGTAAGAAATGCCTGAGAGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: DFGDCWTRILLK*HQAGKKCLRES Trigger: TGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCTTGTCCAACAGTCACCAAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR CCA 72 bp | AGCACTGAGGTATGTGTAACAGCTAAGAAAAAGATCTaGCTCTCACACTTTGATGACAGCTTCCAAGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: STEVCVTAKKKI*LSHFDDSFQGI Trigger: TATGCCTTGGAAGCTGTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGCTGTTACACATACCTCAGTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCAGAAGGAAAACAAACTaGCAAGTCATGGCATATCAC | + |
|
Preference number: 3 (lower is better) Translates to: RILLKCHQAGKKCLRESVRRKTN*QVMAYH Trigger: GTGATATGCCATGACTTGCAAGTTTGTTTTCCTTCT...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR GCA 72 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATaGCTGAGAGAATCAGTCAAGTTCAAGGTTGTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: RILLKCHQAGKK*LRESVKFKVVL Trigger: TAACACAACCTTGAACTTGACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCAGATTTGTCTGGAAGTaGACTCAAATGCAGAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: RILLKCHQAGKKCLRESVRFVWK*TQMQNS Trigger: AGAATTCTGCATTTGAGTCAACTTCCAGACAAATCT...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR TCA 72 bp | GCAGCAAAGTATCTTTTTCTCCACCCCTTATATGTTTaGTTTCATCACACAAGTGTCCAAGGTCTTCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: AAKYLFLHPLYV*FHHTSVQGLLS Trigger: AGACAGAAGACCTTGGACACTTGTGTGATGAAATCAAACATATAAGGGGTGGAGAAAAAGATACTTTGCTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAGGTATGTGTAACAGCTAAGAAAAAGATCTGGCTCTCACACTTTGATGACTATTTATCCCTGAACTaGATAGAGATGAGAACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TEVCVTAKKKIWLSHFDDYLSLN*IEMRTA Trigger: TGCTGTTCTCATCTCTATCAAGTTCAGGGATAAATA...GTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGCTGTTACACATACCTCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | GTTACAGCCAGGTGGTGGCGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGGATGAGGCCTTCTGCTaGCTGCTCAAGGGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTARWWRCTPLIPALGRQDEAFC*LLKGLP Trigger: AGGCAGGCCCTTGAGCAGTCAGCAGAAGGCCTCATC...CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCGCCACCACCTGGCTGTAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR TCA 90 bp | TGTATCAGGAGCTCCATGAAGATTGCTGTGATTTGGGAGGGAGGGGTGGGAGGGTGCTGGGAGGGCGGCTaGATGACGGGGACAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: CIRSSMKIAVIWEGGVGGCWEGG*MTGTDA Trigger: AGCATCTGTCCCCGTCATTCAGCCGCCCTCCCAGCA...CCCTCCCACCCCTCCCTCCCAAATCACAGCAATCTTCATGGAGCTCCTGATACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCCTGGCTGAGTGCAGCATCAAACACCTCCATCCCCACCCAGTGTTTCTGCTGCTGGGAGGGCGGCTaGATGACGGGGACAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: MSWLSAASNTSIPTQCFCCWEGG*MTGTDA Trigger: AGCATCTGTCCCCGTCATTCAGCCGCCCTCCCAGCA...GCAGAAACACTGGGTGGGGATGGAGGTGTTTGATGCTGCACTCAGCCAGGACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | TGTATCAGGAGCTCCATGAAGATTGCTGTGATTTGGGAGGGAGGGGTGGGAGGGGGAGGTCTTCAGCCCTaGGCCTTGGGAGGCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CIRSSMKIAVIWEGGVGGGGLQP*ALGGSL Trigger: AAGGCTGCCTCCCAAGGCTCAGGGCTGAAGACCTCC...CCCTCCCACCCCTCCCTCCCAAATCACAGCAATCTTCATGGAGCTCCTGATACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCATCAAATCCAAGCACAGCAGTCAGATGGAAGGAGGACGGCTGGAAAGCCCAGGCCAGCCCCGTaGCTGTACTTCCAGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QQHQIQAQQSDGRRTAGKPRPAP*LYFQLM Trigger: CATGAGCTGGAAGTACAGCCACGGGGCTGGCCTGGG...CTTTCCAGCCGTCCTCCTTCCATCTGACTGCTGTGCTTGGATTTGATGCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | GTTACAGCCAGGTGGTGGCGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGTTCAGCCCTGAGCCTTaGGAGGCAGCCTTTGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTARWWRCTPLIPALGRQFSPEP*EAAFDK Trigger: CTTATCAAAGGCTGCCTCCCAAGGCTCAGGGCTGAA...CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCGCCACCACCTGGCTGTAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR CCA 90 bp | ATGTCCTGGCTGAGTGCAGCATCAAACACCTCCATCCCCACCCAGTGTTTCTGCTCCGTCTCACCTCCTTaGCATGCTTGGGGTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MSWLSAASNTSIPTQCFCSVSPP*HAWGLG Trigger: CCCCAGACCCCAAGCATGCCAAGGAGGTGAGACGGA...GCAGAAACACTGGGTGGGGATGGAGGTGTTTGATGCTGCACTCAGCCAGGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126792.9 |
||
| CDS-3UTR GCA 90 bp | ATGTCCTGGCTGAGTGCAGCATCAAACACCTCCATCCCCACCCAGTGTTTCTGCCTTACCTCCTTGGCATaGTTGGGGTCTGGGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MSWLSAASNTSIPTQCFCLTSLA*LGSGEV Trigger: GACCTCCCCAGACCCCAAGCATGCCAAGGAGGTAAG...GCAGAAACACTGGGTGGGGATGGAGGTGTTTGATGCTGCACTCAGCCAGGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR GCA 90 bp | ATGTCCTGGCTGAGTGCAGCATCAAACACCTCCATCCCCACCCAGTGTTTCTGCCCCTCTAAGCATGAGTaGAGGGAATCCCCAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: MSWLSAASNTSIPTQCFCPSKHE*RESPAS Trigger: CGAGGCTGGGGATTCCCTGCACTCATGCTTAGAGGG...GCAGAAACACTGGGTGGGGATGGAGGTGTTTGATGCTGCACTCAGCCAGGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGGCCCCTCTAAGCATGAGTaGAGGGAATCCCCAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ERAFSQVSLVVHVASGQGPSKHE*RESPAS Trigger: CGAGGCTGGGGATTCCCTGCACTCATGCTTAGAGGG...GCCCTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR CCA 90 bp | GTTACAGCCAGGTGGTGGCGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGTTCCCGTCCACTTTTTaGGTTCTGAAGCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTARWWRCTPLIPALGRQFPSTF*VLKPLS Trigger: AGACAGAGGCTTCAGAACCCAAAAAGTGGACGGGAA...CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCGCCACCACCTGGCTGTAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR TCA 90 bp | TGTAACAATGCAAGGAAAATAGTCAGGACCCTCCACGTGCCAACAACTGCTAGCTGCTGGGAGGGCGGCTaGATGACGGGGACAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: CNNARKIVRTLHVPTTASCWEGG*MTGTDA Trigger: AGCATCTGTCCCCGTCATTCAGCCGCCCTCCCAGCA...GCTAGCAGTTGTTGGCACGTGGAGGGTCCTGACTATTTTCCTTGCATTGTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | GCTGATACAGGAAAAACTACAAAGCTGAATGACGCCATCACAGGTTCCCTGAGGGGAGGTCTTCAGCCCTaGGCCTTGGGAGGCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ADTGKTTKLNDAITGSLRGGLQP*ALGGSL Trigger: AAGGCTGCCTCCCAAGGCTCAGGGCTGAAGACCTCC...CCTCAGGGAACCTGTGATGGCGTCATTCAGCTTTGTAGTTTTTCCTGTATCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | GCTGATACAGGAAAAACTACAAAGCTGAATGACGCCATCACAGGTTCCCTGAGGCCCAGGCCAGCCCCGTaGCTGTACTTCCAGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: ADTGKTTKLNDAITGSLRPRPAP*LYFQLM Trigger: CATGAGCTGGAAGTACAGCCACGGGGCTGGCCTGGG...CCTCAGGGAACCTGTGATGGCGTCATTCAGCTTTGTAGTTTTTCCTGTATCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR CAA 72 bp | CTGACCTGGGCAGAAGTGTTACTGACAGTCCAGTCTTaGAAGCCCGCCTCCACAAACAGCATCTACTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTWAEVLLTVQS*KPASTNSIYFP Trigger: GGGGAAGTAGATGCTGTTTGTGGAGGCGGGCTTCAAAGACTGGACTGTCAGTAACACTTCTGCCCAGGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR TCA 90 bp | GCTGATACAGGAAAAACTACAAAGCTGAATGACGCCATCACAGGTTCCCTGAGGGATGAGGCCTTCTGCTaGCTGCTCAAGGGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ADTGKTTKLNDAITGSLRDEAFC*LLKGLP Trigger: AGGCAGGCCCTTGAGCAGTCAGCAGAAGGCCTCATC...CCTCAGGGAACCTGTGATGGCGTCATTCAGCTTTGTAGTTTTTCCTGTATCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | TTCCAGGAAAGTGGTGTAAACAGGTCTTTGCCATACATATGGCCTATGCCCACAGGAGGTCTTCAGCCCTaGGCCTTGGGAGGCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQESGVNRSLPYIWPMPTGGLQP*ALGGSL Trigger: AAGGCTGCCTCCCAAGGCTCAGGGCTGAAGACCTCC...TGTGGGCATAGGCCATATGTATGGCAAAGACCTGTTTACACCACTTTCCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR GCA 90 bp | ATGTCCTGGCTGAGTGCAGCATCAAACACCTCCATCCCCACCCAGTGTTTCTGCTCCTGCTGCAGACTCTaGTGGAGCATTTCTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MSWLSAASNTSIPTQCFCSCCRL*WSISED Trigger: GTCTTCAGAAATGCTCCAGCAGAGTCTGCAGCAGGA...GCAGAAACACTGGGTGGGGATGGAGGTGTTTGATGCTGCACTCAGCCAGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGCCAATACAGCAGCATCAAATCCAAGCACAGCAGTCAGATGGAAGGAGGATGTCTGACTCCTCCTTaGCATGCTTGGGGTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSQYSSIKSKHSSQMEGGCLTPP*HAWGLG Trigger: CCCCAGACCCCAAGCATGCCAAGGAGGAGTCAGACA...TCCTCCTTCCATCTGACTGCTGTGCTTGGATTTGATGCTGCTGTATTGGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063607.12 |
||
| 3UTR CAA 72 bp | CTCTGGTGGAAAGAGATGCTGCATGGCTTCTGTACGTaGCCTGTGATCTTGGCTTGTGGCCTTTTCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LWWKEMLHGFCT*PVILACGLFLP Trigger: GGGAAGGAAAAGGCCACAAGCCAAGATCACAGGCAACGTACAGAAGCCATGCAGCATCTCTTTCCACCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| 3UTR CAA 72 bp | GATGAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTaGCCTGGCAGACACAAGACCCCACATAAGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DEAKDMAQSVEC*PGRHKTPHKTE Trigger: CTCTGTCTTATGTGGGGTCTTGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR TCA 90 bp | ACGTGCCAACAACTGCTAGCTACTATTAAAATACTGTCACCCGGAGGTGGAATGGATGAGGCCTTCTGCTaGCTGCTCAAGGGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TCQQLLATIKILSPGGGMDEAFC*LLKGLP Trigger: AGGCAGGCCCTTGAGCAGTCAGCAGAAGGCCTCATC...CATTCCACCTCCGGGTGACAGTATTTTAATAGTAGCTAGCAGTTGTTGGCACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGGCTCCTGCTGCAGACTCTaGTGGAGCATTTCTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ERAFSQVSLVVHVASGQGSCCRL*WSISED Trigger: GTCTTCAGAAATGCTCCAGCAGAGTCTGCAGCAGGA...GCCCTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR GCA 90 bp | TTCCAGGAAAGTGGTGTAAACAGGTCTTTGCCATACATATGGCCTATGCCCACAGACTCCTCCTTGGCATaGTTGGGGTCTGGGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FQESGVNRSLPYIWPMPTDSSLA*LGSGEV Trigger: GACCTCCCCAGACCCCAAGCATGCCAAGGAGGAGTC...TGTGGGCATAGGCCATATGTATGGCAAAGACCTGTTTACACCACTTTCCTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063607.12 |
||
| CDS-3UTR GCA 90 bp | TTCCAGGAAAGTGGTGTAAACAGGTCTTTGCCATACATATGGCCTATGCCCACACTCACCTCCTTGGCATaGTTGGGGTCTGGGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FQESGVNRSLPYIWPMPTLTSLA*LGSGEV Trigger: GACCTCCCCAGACCCCAAGCATGCCAAGGAGGTGAG...TGTGGGCATAGGCCATATGTATGGCAAAGACCTGTTTACACCACTTTCCTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | GAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACAAGACCCCACTGTCCACTTTTTaGGTTCTGAAGCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EAKDMAQSVECLPGRHKTPLSTF*VLKPLS Trigger: AGACAGAGGCTTCAGAACCCAAAAAGTGGACAGTGG...GGTCTTGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| CDS-3UTR CCA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCCCCAGGCCAGCCCCGTaGCTGTACTTCCAGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RILLKCHQAGKKCLRESVPRPAP*LYFQLM Trigger: CATGAGCTGGAAGTACAGCCACGGGGCTGGCCTGGG...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCATCAAATCCAAGCACAGCAGTCAGATGGAAGGAGGACGGCTGGAAAGCCCAGGTCTGCTTTCTaGGTCTTGCTGACCATTACT | + |
|
Preference number: 4 (lower is better) Translates to: QQHQIQAQQSDGRRTAGKPRSAF*VLLTIT Trigger: AGTAATGGTCAGCAAGACCCAGAAAGCAGACCTGGG...CTTTCCAGCCGTCCTCCTTCCATCTGACTGCTGTGCTTGGATTTGATGCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGCTTCTCTGGGAGTTGTaGGCCCAGGTCTGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SERAFSQVSLVVHVASGQLLWEL*AQVCFL Trigger: CAGAAAGCAGACCTGGGCCCACAACTCCCAGAGAAG...CTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGCCAATACAGCAGCATCAAATCCAAGCACAGCAGTCAGATGGAAGGAGGACTTTGCTTACCTCCTTaGCATGCTTGGGGTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSQYSSIKSKHSSQMEGGLCLPP*HAWGLG Trigger: CCCCAGACCCCAAGCATGCCAAGGAGGTAAGCAAAG...TCCTCCTTCCATCTGACTGCTGTGCTTGGATTTGATGCTGCTGTATTGGCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR TCA 90 bp | AGGGAGAAGGAAAACAAACTTGCAAGTCATGGCATATCACTTGCTTTCTGCACTTGCTGGGAGGGCGGCTaGATGACGGGGACAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: REKENKLASHGISLAFCTCWEGG*MTGTDA Trigger: AGCATCTGTCCCCGTCATTCAGCCGCCCTCCCAGCA...AGTGCAGAAAGCAAGTGATATGCCATGACTTGCAAGTTTGTTTTCCTTCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR TCA 90 bp | AGGGAGAAGGAAAACAAACTTGCAAGTCATGGCATATCACTTGCTTTCTGCACTGGAGGTCTTCAGCCCTaGGCCTTGGGAGGCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: REKENKLASHGISLAFCTGGLQP*ALGGSL Trigger: AAGGCTGCCTCCCAAGGCTCAGGGCTGAAGACCTCC...AGTGCAGAAAGCAAGTGATATGCCATGACTTGCAAGTTTGTTTTCCTTCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CCA 90 bp | GAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGGCCCACTGTCCACTTTTTaGGTTCTGAAGCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ERAFSQVSLVVHVASGQGPLSTF*VLKPLS Trigger: AGACAGAGGCTTCAGAACCCAAAAAGTGGACAGTGG...GCCCTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CCA 90 bp | ATGTCCTGGCTGAGTGCAGCATCAAACACCTCCATCCCCACCCAGTGTTTCTGCTGCTGCAGACTCTGCTaGAGCATTTCTGAAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: MSWLSAASNTSIPTQCFCCCRLC*SISEDF Trigger: AAAGTCTTCAGAAATGCTCCAGCAGAGTCTGCAGCA...GCAGAAACACTGGGTGGGGATGGAGGTGTTTGATGCTGCACTCAGCCAGGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CCA 90 bp | TCCAGCCAATACAGCAGCATCAAATCCAAGCACAGCAGTCAGATGGAAGGAGGATTCAGCCCTGAGCCTTaGGAGGCAGCCTTTGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSQYSSIKSKHSSQMEGGFSPEP*EAAFDK Trigger: CTTATCAAAGGCTGCCTCCCAAGGCTCAGGGCTGAA...TCCTCCTTCCATCTGACTGCTGTGCTTGGATTTGATGCTGCTGTATTGGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CCA 90 bp | ACGTGCCAACAACTGCTAGCTACTATTAAAATACTGTCACCCGGAGGTGGAATGTGTCTGACTCCTCCTTaGCATGCTTGGGGTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TCQQLLATIKILSPGGGMCLTPP*HAWGLG Trigger: CCCCAGACCCCAAGCATGCCAAGGAGGAGTCAGACA...CATTCCACCTCCGGGTGACAGTATTTTAATAGTAGCTAGCAGTTGTTGGCACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 |
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| CDS-3UTR CCA 90 bp | GAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACAAGACCATGTCTCCCTCCTGGTaGGTCTTCTTCTTCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EAKDMAQSVECLPGRHKTMSPSW*VFFFFF Trigger: GAAAAAGAAGAAGAAGACCCACCAGGAGGGAGACAT...GGTCTTGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| CDS-3UTR TCA 90 bp | CAGCAGCATCAAATCCAAGCACAGCAGTCAGATGGAAGGAGGACGGCTGGAAAGTTGAGTCTCTGGTTCTaGGACATTTGCAACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QQHQIQAQQSDGRRTAGKLSLWF*DICNHS Trigger: AGAGTGGTTGCAAATGTCTCAGAACCAGAGACTCAA...CTTTCCAGCCGTCCTCCTTCCATCTGACTGCTGTGCTTGGATTTGATGCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CCA 90 bp | ATGTCACATGGGTCTCTGTATCAGGAGCTCCATGAAGATTGCTGTGATTTGGGACTTCTCTGGGAGTTGTaGGCCCAGGTCTGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MSHGSLYQELHEDCCDLGLLWEL*AQVCFL Trigger: CAGAAAGCAGACCTGGGCCCACAACTCCCAGAGAAG...TCCCAAATCACAGCAATCTTCATGGAGCTCCTGATACAGAGACCCATGTGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | TGTAACAATGCAAGGAAAATAGTCAGGACCCTCCACGTGCCAACAACTGCTAGCCTGCTGGAGCATTTCTaGAGACTTTTTGTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CNNARKIVRTLHVPTTASLLEHF*RLFVQG Trigger: GCCCTGGACAAAAAGTCTTCAGAAATGCTCCAGCAG...GCTAGCAGTTGTTGGCACGTGGAGGGTCCTGACTATTTTCCTTGCATTGTTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGTTGAGTCTCTGGTTCTaGGACATTTGCAACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCVLPTITQVVLRAGTPVLSLWF*DICNHS Trigger: AGAGTGGTTGCAAATGTCTCAGAACCAGAGACTCAA...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR TCA 90 bp | CTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAACAATGCAAGGAGGAGGTCTTCAGCCCTaGGCCTTGGGAGGCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LDRDENSTHSIISVTMQGGGLQP*ALGGSL Trigger: AAGGCTGCCTCCCAAGGCTCAGGGCTGAAGACCTCC...TCCTTGCATTGTTACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR GCA 90 bp | ACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTCGATCAATCTCTTCTTaGAAGGCCTTCCGTCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: TACVFTSLRAELQPGGGGRSISS*KAFRLT Trigger: GGTGAGACGGAAGGCCTTGCAAGAAGAGATTGATCG...ACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAGAAGGAAAACAAACTTGCAAGTCATGGCATATCACTTGCTTTCTGCACTCTTACCTCCTTGGCATaGTTGGGGTCTGGGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: REKENKLASHGISLAFCTLTSLA*LGSGEV Trigger: GACCTCCCCAGACCCCAAGCATGCCAAGGAGGTAAG...AGTGCAGAAAGCAAGTGATATGCCATGACTTGCAAGTTTGTTTTCCTTCTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR CCA 90 bp | CTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAACAATGCAAGGACCCAGGCCAGCCCCGTaGCTGTACTTCCAGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LDRDENSTHSIISVTMQGPRPAP*LYFQLM Trigger: CATGAGCTGGAAGTACAGCCACGGGGCTGGCCTGGG...TCCTTGCATTGTTACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | GCTGATACAGGAAAAACTACAAAGCTGAATGACGCCATCACAGGTTCCCTGAGGCCCAGGTCTGCTTTCTaGGTCTTGCTGACCATTACT | + |
|
Preference number: 4 (lower is better) Translates to: ADTGKTTKLNDAITGSLRPRSAF*VLLTIT Trigger: AGTAATGGTCAGCAAGACCCAGAAAGCAGACCTGGG...CCTCAGGGAACCTGTGATGGCGTCATTCAGCTTTGTAGTTTTTCCTGTATCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | ACGTGCCAACAACTGCTAGCTACTATTAAAATACTGTCACCCGGAGGTGGAATGCTGCTGGAGCATTTCTaGAGACTTTTTGTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCQQLLATIKILSPGGGMLLEHF*RLFVQG Trigger: GCCCTGGACAAAAAGTCTTCAGAAATGCTCCAGCAG...CATTCCACCTCCGGGTGACAGTATTTTAATAGTAGCTAGCAGTTGTTGGCACGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCACATGGGTCTCTGTATCAGGAGCTCCATGAAGATTGCTGTGATTTGGGACTGCTGGAGCATTTCTaGAGACTTTTTGTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MSHGSLYQELHEDCCDLGLLEHF*RLFVQG Trigger: GCCCTGGACAAAAAGTCTTCAGAAATGCTCCAGCAG...TCCCAAATCACAGCAATCTTCATGGAGCTCCTGATACAGAGACCCATGTGACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | TCCAGCCAATACAGCAGCATCAAATCCAAGCACAGCAGTCAGATGGAAGGAGGATTGAGTCTCTGGTTCTaGGACATTTGCAACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSQYSSIKSKHSSQMEGGLSLWF*DICNHS Trigger: AGAGTGGTTGCAAATGTCTCAGAACCAGAGACTCAA...TCCTCCTTCCATCTGACTGCTGTGCTTGGATTTGATGCTGCTGTATTGGCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR GCA 90 bp | CTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAACAATGCAAGGAGACTCCTCCTTGGCATaGTTGGGGTCTGGGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LDRDENSTHSIISVTMQGDSSLA*LGSGEV Trigger: GACCTCCCCAGACCCCAAGCATGCCAAGGAGGAGTC...TCCTTGCATTGTTACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 |
||
| CDS-3UTR CCA 90 bp | GCTGATACAGGAAAAACTACAAAGCTGAATGACGCCATCACAGGTTCCCTGAGGCCACTGTCCACTTTTTaGGTTCTGAAGCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ADTGKTTKLNDAITGSLRPLSTF*VLKPLS Trigger: AGACAGAGGCTTCAGAACCCAAAAAGTGGACAGTGG...CCTCAGGGAACCTGTGATGGCGTCATTCAGCTTTGTAGTTTTTCCTGTATCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTTTCCCGTCCACTTTTTaGGTTCTGAAGCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TACVFTSLRAELQPGGGGFPSTF*VLKPLS Trigger: AGACAGAGGCTTCAGAACCCAAAAAGTGGACGGGAA...ACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR CCA 90 bp | TGTAACAATGCAAGGAAAATAGTCAGGACCCTCCACGTGCCAACAACTGCTAGCTTCCCGTCCACTTTTTaGGTTCTGAAGCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CNNARKIVRTLHVPTTASFPSTF*VLKPLS Trigger: AGACAGAGGCTTCAGAACCCAAAAAGTGGACGGGAA...GCTAGCAGTTGTTGGCACGTGGAGGGTCCTGACTATTTTCCTTGCATTGTTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | TTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTACCCAGGCCAGCCCCGTaGCTGTACTTCCAGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: FIPELDRDENSTHSIISVPRPAP*LYFQLM Trigger: CATGAGCTGGAAGTACAGCCACGGGGCTGGCCTGGG...TACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAGAAGGAAAACAAACTTGCAAGTCATGGCATATCACTTGCTTTCTGCACTCTTCTCTGGGAGTTGTaGGCCCAGGTCTGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: REKENKLASHGISLAFCTLLWEL*AQVCFL Trigger: CAGAAAGCAGACCTGGGCCCACAACTCCCAGAGAAG...AGTGCAGAAAGCAAGTGATATGCCATGACTTGCAAGTTTGTTTTCCTTCTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTAGGATGTCTCCCTCCTaGTGGGTCTTCTTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TACVFTSLRAELQPGGGGRMSPS*WVFFFF Trigger: AAAGAAGAAGAAGACCCACCAGGAGGGAGACATCCT...ACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR TCA 90 bp | TTATTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTTGCTGGGAGGGCGGCTaGATGACGGGGACAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFIPELDRDENSTHSIISCWEGG*MTGTDA Trigger: AGCATCTGTCCCCGTCATTCAGCCGCCCTCCCAGCA...ACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCCTGCTGGAGCATTTCTaGAGACTTTTTGTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RILLKCHQAGKKCLRESVLLEHF*RLFVQG Trigger: GCCCTGGACAAAAAGTCTTCAGAAATGCTCCAGCAG...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | TGTAACAATGCAAGGAAAATAGTCAGGACCCTCCACGTGCCAACAACTGCTAGCTTGAGTCTCTGGTTCTaGGACATTTGCAACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: CNNARKIVRTLHVPTTASLSLWF*DICNHS Trigger: AGAGTGGTTGCAAATGTCTCAGAACCAGAGACTCAA...GCTAGCAGTTGTTGGCACGTGGAGGGTCCTGACTATTTTCCTTGCATTGTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | TTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAGATGAGGCCTTCTGCTaGCTGCTCAAGGGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FIPELDRDENSTHSIISVDEAFC*LLKGLP Trigger: AGGCAGGCCCTTGAGCAGTCAGCAGAAGGCCTCATC...TACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR GCA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCCGATCAATCTCTTCTTaGAAGGCCTTCCGTCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: RILLKCHQAGKKCLRESVRSISS*KAFRLT Trigger: GGTGAGACGGAAGGCCTTGCAAGAAGAGATTGATCG...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR GCA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCTCCTGCTGCAGACTCTaGTGGAGCATTTCTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RILLKCHQAGKKCLRESVSCCRL*WSISED Trigger: GTCTTCAGAAATGCTCCAGCAGAGTCTGCAGCAGGA...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | ACGTGCCAACAACTGCTAGCTACTATTAAAATACTGTCACCCGGAGGTGGAATGTTCCCGTCCACTTTTTaGGTTCTGAAGCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TCQQLLATIKILSPGGGMFPSTF*VLKPLS Trigger: AGACAGAGGCTTCAGAACCCAAAAAGTGGACGGGAA...CATTCCACCTCCGGGTGACAGTATTTTAATAGTAGCTAGCAGTTGTTGGCACGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTTGCTGCAGACTCTGCTaGAGCATTTCTGAAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TACVFTSLRAELQPGGGGCCRLC*SISEDF Trigger: AAAGTCTTCAGAAATGCTCCAGCAGAGTCTGCAGCA...ACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAGAAGGAAAACAAACTTGCAAGTCATGGCATATCACTTGCTTTCTGCACTTTCAGCCCTGAGCCTTaGGAGGCAGCCTTTGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: REKENKLASHGISLAFCTFSPEP*EAAFDK Trigger: CTTATCAAAGGCTGCCTCCCAAGGCTCAGGGCTGAA...AGTGCAGAAAGCAAGTGATATGCCATGACTTGCAAGTTTGTTTTCCTTCTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR CAA 72 bp | AGAGTTCACCAAGGCCGAGGGAGATTTGTCTGGAAGTaGACTCAAATGCAGAATTCTGCCATTGACGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RVHQGRGRFVWK*TQMQNSAIDVT Trigger: AGTCACGTCAATGGCAGAATTCTGCATTTGAGTCAACTTCCAGACAAATCTCCCTCGGCCTTGGTGAACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| 3UTR CAA 72 bp | TTAGGCTGGAATGTGACTTGTGGGGAACACAAGCTATaGGAGTTATGCAGATGGTTCCCAGAGTTCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGWNVTCGEHKL*ELCRWFPEFTK Trigger: CTTGGTGAACTCTGGGAACCATCTGCATAACTCCAATAGCTTGTGTTCCCCACAAGTCACATTCCAGCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | ACGTGCCAACAACTGCTAGCTACTATTAAAATACTGTCACCCGGAGGTGGAATGTTGAGTCTCTGGTTCTaGGACATTTGCAACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TCQQLLATIKILSPGGGMLSLWF*DICNHS Trigger: AGAGTGGTTGCAAATGTCTCAGAACCAGAGACTCAA...CATTCCACCTCCGGGTGACAGTATTTTAATAGTAGCTAGCAGTTGTTGGCACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | TTATTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGATGAGGCCTTCTGCTaGCTGCTCAAGGGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFIPELDRDENSTHSIISDEAFC*LLKGLP Trigger: AGGCAGGCCCTTGAGCAGTCAGCAGAAGGCCTCATC...ACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | TGTAACAATGCAAGGAAAATAGTCAGGACCCTCCACGTGCCAACAACTGCTAGCCCAAAGCTTCACTTTTaGCTGACTTCTTACTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CNNARKIVRTLHVPTTASPKLHF*LTSYSL Trigger: AAGGGAGTAAGAAGTCAGTCAAAAGTGAAGCTTTGG...GCTAGCAGTTGTTGGCACGTGGAGGGTCCTGACTATTTTCCTTGCATTGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAGAAGGAAAACAAACTTGCAAGTCATGGCATATCACTTGCTTTCTGCACTTCCTGCTGCAGACTCTaGTGGAGCATTTCTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: REKENKLASHGISLAFCTSCCRL*WSISED Trigger: GTCTTCAGAAATGCTCCAGCAGAGTCTGCAGCAGGA...AGTGCAGAAAGCAAGTGATATGCCATGACTTGCAAGTTTGTTTTCCTTCTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR GCA 90 bp | CACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCAAGTTCAAGGTTGTGTTATCCTCCTTTTCCTCCTaGCAGGGGTCTTCCTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: HQAGKKCLRESVKFKVVLSSFSS*QGSSFT Trigger: AGTAAAGGAAGACCCCTGGCAGGAGGAAAAGGAGGA...TAACACAACCTTGAACTTGACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| CDS-3UTR CCA 90 bp | ACGTGCCAACAACTGCTAGCTACTATTAAAATACTGTCACCCGGAGGTGGAATGTGCTGCAGACTCTGCTaGAGCATTTCTGAAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TCQQLLATIKILSPGGGMCCRLC*SISEDF Trigger: AAAGTCTTCAGAAATGCTCCAGCAGAGTCTGCAGCA...CATTCCACCTCCGGGTGACAGTATTTTAATAGTAGCTAGCAGTTGTTGGCACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | CACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCAAGTTCAAGGTTGTGTTACCCAGGTCTGCTTTCTaGGTCTTGCTGACCATTACT | + |
|
Preference number: 4 (lower is better) Translates to: HQAGKKCLRESVKFKVVLPRSAF*VLLTIT Trigger: AGTAATGGTCAGCAAGACCCAGAAAGCAGACCTGGG...TAACACAACCTTGAACTTGACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CCA 90 bp | ACTGAGGTATGTGTAACAGCTAAGAAAAAGATCTGGCTCTCACACTTTGATGACTTCAGCCCTGAGCCTTaGGAGGCAGCCTTTGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: TEVCVTAKKKIWLSHFDDFSPEP*EAAFDK Trigger: CTTATCAAAGGCTGCCTCCCAAGGCTCAGGGCTGAA...GTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGCTGTTACACATACCTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | CTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAACAATGCAAGGACTTTGCTTACCTCCTTaGCATGCTTGGGGTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDRDENSTHSIISVTMQGLCLPP*HAWGLG Trigger: CCCCAGACCCCAAGCATGCCAAGGAGGTAAGCAAAG...TCCTTGCATTGTTACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR CCA 90 bp | TTCCAGGAAAGTGGTGTAAACAGGTCTTTGCCATACATATGGCCTATGCCCACAATGTCTCCCTCCTGGTaGGTCTTCTTCTTCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FQESGVNRSLPYIWPMPTMSPSW*VFFFFF Trigger: GAAAAAGAAGAAGAAGACCCACCAGGAGGGAGACAT...TGTGGGCATAGGCCATATGTATGGCAAAGACCTGTTTACACCACTTTCCTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR TCA 90 bp | ACGTGCCAACAACTGCTAGCTACTATTAAAATACTGTCACCCGGAGGTGGAATGCCAAAGCTTCACTTTTaGCTGACTTCTTACTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TCQQLLATIKILSPGGGMPKLHF*LTSYSL Trigger: AAGGGAGTAAGAAGTCAGTCAAAAGTGAAGCTTTGG...CATTCCACCTCCGGGTGACAGTATTTTAATAGTAGCTAGCAGTTGTTGGCACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGTATGTGTAACAGCTAAGAAAAAGATCTGGCTCTCACACTTTGATGACTCCTCCTTTTCCTCCTaGCAGGGGTCTTCCTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: TEVCVTAKKKIWLSHFDDSSFSS*QGSSFT Trigger: AGTAAAGGAAGACCCCTGGCAGGAGGAAAAGGAGGA...GTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGCTGTTACACATACCTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR CCA 90 bp | TTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTACTTCTCTGGGAGTTGTaGGCCCAGGTCTGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FIPELDRDENSTHSIISVLLWEL*AQVCFL Trigger: CAGAAAGCAGACCTGGGCCCACAACTCCCAGAGAAG...TACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR CAA 72 bp | ATTACAAGCACAGTGACTTCCTGTGGTTTTACTGTCTaGACTGCTGTTGGTCAGAACTCACTGGTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ITSTVTSCGFTV*TAVGQNSLVSL Trigger: CAGAGAAACCAGTGAGTTCTGACCAACAGCAGTCAAGACAGTAAAACCACAGGAAGTCACTGTGCTTGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR TCA 90 bp | CTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAACAATGCAAGGACTGCTGGAGCATTTCTaGAGACTTTTTGTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LDRDENSTHSIISVTMQGLLEHF*RLFVQG Trigger: GCCCTGGACAAAAAGTCTTCAGAAATGCTCCAGCAG...TCCTTGCATTGTTACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | ACGTGCCAACAACTGCTAGCTACTATTAAAATACTGTCACCCGGAGGTGGAATGAGCTTCACTTTTGACTaGCTTCTTACTCCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TCQQLLATIKILSPGGGMSFTFD*LLTPFL Trigger: AAGAAAGGGAGTAAGAAGTCAGTCAAAAGTGAAGCT...CATTCCACCTCCGGGTGACAGTATTTTAATAGTAGCTAGCAGTTGTTGGCACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR GCA 90 bp | CTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAACAATGCAAGGACGATCAATCTCTTCTTaGAAGGCCTTCCGTCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LDRDENSTHSIISVTMQGRSISS*KAFRLT Trigger: GGTGAGACGGAAGGCCTTGCAAGAAGAGATTGATCG...TCCTTGCATTGTTACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR GCA 90 bp | CTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAACAATGCAAGGATCCTGCTGCAGACTCTaGTGGAGCATTTCTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LDRDENSTHSIISVTMQGSCCRL*WSISED Trigger: GTCTTCAGAAATGCTCCAGCAGAGTCTGCAGCAGGA...TCCTTGCATTGTTACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | TTATTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTCTTCTCTGGGAGTTGTaGGCCCAGGTCTGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFIPELDRDENSTHSIISLLWEL*AQVCFL Trigger: CAGAAAGCAGACCTGGGCCCACAACTCCCAGAGAAG...ACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | TTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTATTCAGCCCTGAGCCTTaGGAGGCAGCCTTTGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: FIPELDRDENSTHSIISVFSPEP*EAAFDK Trigger: CTTATCAAAGGCTGCCTCCCAAGGCTCAGGGCTGAA...TACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGTATGTGTAACAGCTAAGAAAAAGATCTGGCTCTCACACTTTGATGACAGGATGTCTCCCTCCTaGTGGGTCTTCTTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TEVCVTAKKKIWLSHFDDRMSPS*WVFFFF Trigger: AAAGAAGAAGAAGACCCACCAGGAGGGAGACATCCT...GTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGCTGTTACACATACCTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR GCA 90 bp | TTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTACGATCAATCTCTTCTTaGAAGGCCTTCCGTCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: FIPELDRDENSTHSIISVRSISS*KAFRLT Trigger: GGTGAGACGGAAGGCCTTGCAAGAAGAGATTGATCG...TACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | CTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAACAATGCAAGGACCACTGTCCACTTTTTaGGTTCTGAAGCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDRDENSTHSIISVTMQGPLSTF*VLKPLS Trigger: AGACAGAGGCTTCAGAACCCAAAAAGTGGACAGTGG...TCCTTGCATTGTTACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | CTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAACAATGCAAGGATTCCCGTCCACTTTTTaGGTTCTGAAGCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDRDENSTHSIISVTMQGFPSTF*VLKPLS Trigger: AGACAGAGGCTTCAGAACCCAAAAAGTGGACGGGAA...TCCTTGCATTGTTACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | TTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTACCCAGGTCTGCTTTCTaGGTCTTGCTGACCATTACT | + |
|
Preference number: 4 (lower is better) Translates to: FIPELDRDENSTHSIISVPRSAF*VLLTIT Trigger: AGTAATGGTCAGCAAGACCCAGAAAGCAGACCTGGG...TACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | TTATTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTCTGCTGGAGCATTTCTaGAGACTTTTTGTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFIPELDRDENSTHSIISLLEHF*RLFVQG Trigger: GCCCTGGACAAAAAGTCTTCAGAAATGCTCCAGCAG...ACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR GCA 90 bp | TTATTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTCGATCAATCTCTTCTTaGAAGGCCTTCCGTCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LFIPELDRDENSTHSIISRSISS*KAFRLT Trigger: GGTGAGACGGAAGGCCTTGCAAGAAGAGATTGATCG...ACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR GCA 90 bp | TTATTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTTCCTGCTGCAGACTCTaGTGGAGCATTTCTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LFIPELDRDENSTHSIISSCCRL*WSISED Trigger: GTCTTCAGAAATGCTCCAGCAGAGTCTGCAGCAGGA...ACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CCA 90 bp | TTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTACCACTGTCCACTTTTTaGGTTCTGAAGCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FIPELDRDENSTHSIISVPLSTF*VLKPLS Trigger: AGACAGAGGCTTCAGAACCCAAAAAGTGGACAGTGG...TACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGTATGTGTAACAGCTAAGAAAAAGATCTGGCTCTCACACTTTGATGACAGCTTCACTTTTGACTaGCTTCTTACTCCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TEVCVTAKKKIWLSHFDDSFTFD*LLTPFL Trigger: AAGAAAGGGAGTAAGAAGTCAGTCAAAAGTGAAGCT...GTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGCTGTTACACATACCTCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| 3UTR CAA 72 bp | TGCAGCAAAGTATCTTTTTCTCCACCCCTTATATGTTaGATTTCATCACACAAGTGTCCAAGGTCTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSKVSFSPPLIC*ISSHKCPRSSV Trigger: GACAGAAGACCTTGGACACTTGTGTGATGAAATCAAACATATAAGGGGTGGAGAAAAAGATACTTTGCTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR CAA 72 bp | ATCAGCTCAAGCACAAGTGTTAAGAATCATGAGATTTaGGTGACTGTTGGACAAGGATATTGCTTAAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISSSTSVKNHEI*VTVGQGYCLSA Trigger: GGCACTTAAGCAATATCCTTGTCCAACAGTCACCAAAATCTCATGATTCTTAACACTTGTGCTTGAGCTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| 3UTR CAA 72 bp | CTTTCAAAAATAACTGGCAAATTCATAAATAATCCTTaGTACGTTACTCTCCTGCCTCAAGGCTGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSKITGKFINNP*YVTLLPQGCPG Trigger: TCCTGGGCAGCCTTGAGGCAGGAGAGTAACGTACAAAGGATTATTTATGAATTTGCCAGTTATTTTTGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR CCA 90 bp | TTATTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTTGCTGCAGACTCTGCTaGAGCATTTCTGAAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFIPELDRDENSTHSIISCCRLC*SISEDF Trigger: AAAGTCTTCAGAAATGCTCCAGCAGAGTCTGCAGCA...ACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS CCA 90 bp | GTGAGCAGCCGCGCAGCCGCGATCCGGAAGTCAGCTTCGACTTTCTaGCCCGCCCCCTCGAAATCCTTCTCCTTCCGGGTCGCGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSSRAAAIRKSASTF*PAPSKSFSFRVAAS Trigger: GGAGGCCGCGACCCGGAAGGAGAAGGATTTCGAGGGGGCGGGCCAGAAAGTCGAAGCTGACTTCCGGATCGCGGCTGCGCGGCTGCTCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | GTAGCCTCAGGGCAGGGCCTCATGGGCCCAAGCAGATATAGCACAGAAATCAGCTCCTCCTTGGCATGCTaGGGGTCTGGGGAGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VASGQGLMGPSRYSTEISSSLAC*GSGEVF Trigger: GAAGACCTCCCCAGACCCCAAGCATGCCAAGGAGGA...GCTGATTTCTGTGCTATATCTGCTTGGGCCCATGAGGCCCTGCCCTGAGGCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063607.12 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGCTCAGAGGTACTGGCCACGTCTGCCTGCTGCACCACACCTGCCTCCTACGATCAATCTCTTCTaGCAAGGCCTTCCGTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: KPAQRYWPRLPAAPHLPPTINLF*QGLPSH Trigger: GTGAGACGGAAGGCCTTGCAAGAAGAGATTGATCGT...AGGAGGCAGGTGTGGTGCAGCAGGCAGACGTGGCCAGTACCTCTGAGCTGGCTT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS GCA 90 bp | GGTTCTGAAGCCTCTGTCTTGCCCGACTCACGATCAATCTCTTCTTaGAAGGCCTTCCGTCTCACCTCCTTGGCATGCTTGGGGTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSEASVLPDSRSISS*KAFRLTSLACLGSG Trigger: CCCAGACCCCAAGCATGCCAAGGAGGTGAGACGGAAGGCCTTGCAAGAAGAGATTGATCGTGAGTCGGGCAAGACAGAGGCTTCAGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | CAGCAGCATCAAATCCAAGCACAGCAGTCAGATGGAAGGAGGACGGCTGGAAAGACCTCCTTGGCATGCTaGGGGTCTGGGGAGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QQHQIQAQQSDGRRTAGKTSLAC*GSGEVF Trigger: GAAGACCTCCCCAGACCCCAAGCATGCCAAGGAGGT...CTTTCCAGCCGTCCTCCTTCCATCTGACTGCTGTGCTTGGATTTGATGCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | GAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACAAGACCCCCACTGTCCACTTTTaGGGTTCTGAAGCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EAKDMAQSVECLPGRHKTPTVHF*GSEASV Trigger: GACAGAGGCTTCAGAACCCAAAAAGTGGACAGTGGG...GGTCTTGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGCCAATACAGCAGCATCAAATCCAAGCACAGCAGTCAGATGGAAGGAGGAACCTCCTTGGCATGCTaGGGGTCTGGGGAGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSQYSSIKSKHSSQMEGGTSLAC*GSGEVF Trigger: GAAGACCTCCCCAGACCCCAAGCATGCCAAGGAGGT...TCCTCCTTCCATCTGACTGCTGTGCTTGGATTTGATGCTGCTGTATTGGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS GCA 90 bp | TTTTTCTTCTCTCTGATGAGGCCTTCTGCTGACTGCTCAAGGGCCTaGCTTCTAGGGCTAGGTGACTTTTTCTGCCTTGCCCGTGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FFFSLMRPSADCSRA*LLGLGDFFCLARVG Trigger: GCCTACACGGGCAAGGCAGAAAAAGTCACCTAGCCCTAGAAGGCAGGCCCTTGAGCAGTCAGCAGAAGGCCTCATCAGAGAGAAGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 ENSMUST00000152309.3 |
||
| CDS-3UTR CAA 90 bp | CAGCAGCATCAAATCCAAGCACAGCAGTCAGATGGAAGGAGGACGGCTGGAAAGCCCACTGTCCACTTTTaGGGTTCTGAAGCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QQHQIQAQQSDGRRTAGKPTVHF*GSEASV Trigger: GACAGAGGCTTCAGAACCCAAAAAGTGGACAGTGGG...CTTTCCAGCCGTCCTCCTTCCATCTGACTGCTGTGCTTGGATTTGATGCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGGCGTTCCCGTCCACTTTTaGGGTTCTGAAGCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ERAFSQVSLVVHVASGQGVPVHF*GSEASV Trigger: GACAGAGGCTTCAGAACCCAAAAAGTGGACGGGAAC...GCCCTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGGCACGATCAATCTCTTCTaGCAAGGCCTTCCGTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ERAFSQVSLVVHVASGQGTINLF*QGLPSH Trigger: GTGAGACGGAAGGCCTTGCAAGAAGAGATTGATCGT...GCCCTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGCCCACTGTCCACTTTTaGGGTTCTGAAGCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VCVLPTITQVVLRAGTPVPTVHF*GSEASV Trigger: GACAGAGGCTTCAGAACCCAAAAAGTGGACAGTGGG...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | GTAGCCTCAGGGCAGGGCCTCATGGGCCCAAGCAGATATAGCACAGAAATCAGCATTTCTGAAGACTTTTaGTCCAGGGCCATGTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VASGQGLMGPSRYSTEISISEDF*SRAMLD Trigger: GTCCAACATGGCCCTGGACAAAAAGTCTTCAGAAAT...GCTGATTTCTGTGCTATATCTGCTTGGGCCCATGAGGCCCTGCCCTGAGGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGCCAATACAGCAGCATCAAATCCAAGCACAGCAGTCAGATGGAAGGAGGAGTTCCCGTCCACTTTTaGGGTTCTGAAGCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSQYSSIKSKHSSQMEGGVPVHF*GSEASV Trigger: GACAGAGGCTTCAGAACCCAAAAAGTGGACGGGAAC...TCCTCCTTCCATCTGACTGCTGTGCTTGGATTTGATGCTGCTGTATTGGCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | GAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACAAGACCATTTCTGAAGACTTTTaGTCCAGGGCCATGTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EAKDMAQSVECLPGRHKTISEDF*SRAMLD Trigger: GTCCAACATGGCCCTGGACAAAAAGTCTTCAGAAAT...GGTCTTGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGCCTTTTCACAGGTTAGTCTGGTTGTACATGTAGCCTCAGGGCAGGGCTGCAACTTGATAGACTaGGAGGCATTCCGGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ERAFSQVSLVVHVASGQGCNLID*EAFRSM Trigger: CATTGACCGGAATGCCTCCAAGTCTATCAAGTTGCA...GCCCTGCCCTGAGGCTACATGTACAACCAGACTAACCTGTGAAAAGGCTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | ACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTCTTCTTCTCTGGGAGTaGTGGGCCCAGGTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TACVFTSLRAELQPGGGGLLLWE*WAQVCF Trigger: AAAGCAGACCTGGGCCCACAACTCCCAGAGAAGAAG...ACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR CAA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCACCTCCTTGGCATGCTaGGGGTCTGGGGAGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RILLKCHQAGKKCLRESVTSLAC*GSGEVF Trigger: GAAGACCTCCCCAGACCCCAAGCATGCCAAGGAGGT...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGCCAATACAGCAGCATCAAATCCAAGCACAGCAGTCAGATGGAAGGAGGAGACTTCCTACCAGCTTaGCTTACCTCCTTGGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SSQYSSIKSKHSSQMEGGDFLPA*LTSLAC Trigger: GCATGCCAAGGAGGTAAGCAAAGCTGGTAGGAAGTC...TCCTCCTTCCATCTGACTGCTGTGCTTGGATTTGATGCTGCTGTATTGGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR CAA 90 bp | TGTAACAATGCAAGGAAAATAGTCAGGACCCTCCACGTGCCAACAACTGCTAGCCCCACTGTCCACTTTTaGGGTTCTGAAGCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CNNARKIVRTLHVPTTASPTVHF*GSEASV Trigger: GACAGAGGCTTCAGAACCCAAAAAGTGGACAGTGGG...GCTAGCAGTTGTTGGCACGTGGAGGGTCCTGACTATTTTCCTTGCATTGTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | CAGCAGCATCAAATCCAAGCACAGCAGTCAGATGGAAGGAGGACGGCTGGAAAGATTTCTGAAGACTTTTaGTCCAGGGCCATGTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QQHQIQAQQSDGRRTAGKISEDF*SRAMLD Trigger: GTCCAACATGGCCCTGGACAAAAAGTCTTCAGAAAT...CTTTCCAGCCGTCCTCCTTCCATCTGACTGCTGTGCTTGGATTTGATGCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGTGCAACTTGATAGACTaGGAGGCATTCCGGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VCVLPTITQVVLRAGTPVCNLID*EAFRSM Trigger: CATTGACCGGAATGCCTCCAAGTCTATCAAGTTGCA...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | ACGTGCCAACAACTGCTAGCTACTATTAAAATACTGTCACCCGGAGGTGGAATGCTTCTTCTCTGGGAGTaGTGGGCCCAGGTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TCQQLLATIKILSPGGGMLLLWE*WAQVCF Trigger: AAAGCAGACCTGGGCCCACAACTCCCAGAGAAGAAG...CATTCCACCTCCGGGTGACAGTATTTTAATAGTAGCTAGCAGTTGTTGGCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | GAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACAAGACCCTGGTTCTGAGACATTaGCAACCACTCTCTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EAKDMAQSVECLPGRHKTLVLRH*QPLSFS Trigger: AGAAAAAGAGAGTGGTTGCAAATGTCTCAGAACCAG...GGTCTTGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS TCA 90 bp | GGGCCTTCGGGCTGTCTATTGGAACGAACTCCAAAGCTTCACTTTTaGCTGACTTCTTACTCCCTTTCTTCAGGCTGTTCTCCACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPSGCLLERTPKLHF*LTSYSLSSGCSPQR Trigger: TCTCTGTGGAGAACAGCCTGAAGAAAGGGAGTAAGAAGTCAGTCAAAAGTGAAGCTTTGGAGTTCGTTCCAATAGACAGCCCGAAGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
||
| CDS-3UTR CAA 90 bp | GCTGATACAGGAAAAACTACAAAGCTGAATGACGCCATCACAGGTTCCCTGAGGACGATCAATCTCTTCTaGCAAGGCCTTCCGTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ADTGKTTKLNDAITGSLRTINLF*QGLPSH Trigger: GTGAGACGGAAGGCCTTGCAAGAAGAGATTGATCGT...CCTCAGGGAACCTGTGATGGCGTCATTCAGCTTTGTAGTTTTTCCTGTATCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | ACGTGCCAACAACTGCTAGCTACTATTAAAATACTGTCACCCGGAGGTGGAATGGTTCCCGTCCACTTTTaGGGTTCTGAAGCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TCQQLLATIKILSPGGGMVPVHF*GSEASV Trigger: GACAGAGGCTTCAGAACCCAAAAAGTGGACGGGAAC...CATTCCACCTCCGGGTGACAGTATTTTAATAGTAGCTAGCAGTTGTTGGCACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | TTCCAGGAAAGTGGTGTAAACAGGTCTTTGCCATACATATGGCCTATGCCCACAGTTCCCGTCCACTTTTaGGGTTCTGAAGCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FQESGVNRSLPYIWPMPTVPVHF*GSEASV Trigger: GACAGAGGCTTCAGAACCCAAAAAGTGGACGGGAAC...TGTGGGCATAGGCCATATGTATGGCAAAGACCTGTTTACACCACTTTCCTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
||
| CDS-3UTR CAA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCCTTCTTCTCTGGGAGTaGTGGGCCCAGGTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RILLKCHQAGKKCLRESVLLLWE*WAQVCF Trigger: AAAGCAGACCTGGGCCCACAACTCCCAGAGAAGAAG...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CAA 90 bp | TGTAACAATGCAAGGAAAATAGTCAGGACCCTCCACGTGCCAACAACTGCTAGCTGCAACTTGATAGACTaGGAGGCATTCCGGTCAATG | + |
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Preference number: 5 (lower is better) Translates to: CNNARKIVRTLHVPTTASCNLID*EAFRSM Trigger: CATTGACCGGAATGCCTCCAAGTCTATCAAGTTGCA...GCTAGCAGTTGTTGGCACGTGGAGGGTCCTGACTATTTTCCTTGCATTGTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CAA 90 bp | GCTGATACAGGAAAAACTACAAAGCTGAATGACGCCATCACAGGTTCCCTGAGGTGCAACTTGATAGACTaGGAGGCATTCCGGTCAATG | + |
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Preference number: 5 (lower is better) Translates to: ADTGKTTKLNDAITGSLRCNLID*EAFRSM Trigger: CATTGACCGGAATGCCTCCAAGTCTATCAAGTTGCA...CCTCAGGGAACCTGTGATGGCGTCATTCAGCTTTGTAGTTTTTCCTGTATCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGCTGGTTCTGAGACATTaGCAACCACTCTCTTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: VCVLPTITQVVLRAGTPVLVLRH*QPLSFS Trigger: AGAAAAAGAGAGTGGTTGCAAATGTCTCAGAACCAG...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CAA 90 bp | CTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAACAATGCAAGGATCCTCCTTGGCATGCTaGGGGTCTGGGGAGGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LDRDENSTHSIISVTMQGSSLAC*GSGEVF Trigger: GAAGACCTCCCCAGACCCCAAGCATGCCAAGGAGGA...TCCTTGCATTGTTACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 |
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| CDS CCA 90 bp | CTTCTTCTTCTTCTTCTTCCTTTTCACAGCCAGCCCTTCACCAACTaGCTGTTCCACCTTTTTCTTGGATTTGACTTTCTTCTTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LLLLLLPFHSQPFTN*LFHLFLGFDFLLPR Trigger: CCTGGGAAGAAGAAAGTCAAATCCAAGAAAAAGGTGGAACAGCCAGTTGGTGAAGGGCTGGCTGTGAAAAGGAAGAAGAAGAAGAAGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| CDS-3UTR CAA 90 bp | CTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAACAATGCAAGGACTTCTTCTCTGGGAGTaGTGGGCCCAGGTCTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LDRDENSTHSIISVTMQGLLLWE*WAQVCF Trigger: AAAGCAGACCTGGGCCCACAACTCCCAGAGAAGAAG...TCCTTGCATTGTTACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CAA 90 bp | ACTGAGGTATGTGTAACAGCTAAGAAAAAGATCTGGCTCTCACACTTTGATGACGACTTCCTACCAGCTTaGCTTACCTCCTTGGCATGC | + |
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Preference number: 5 (lower is better) Translates to: TEVCVTAKKKIWLSHFDDDFLPA*LTSLAC Trigger: GCATGCCAAGGAGGTAAGCAAAGCTGGTAGGAAGTC...GTCATCAAAGTGTGAGAGCCAGATCTTTTTCTTAGCTGTTACACATACCTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTCCTGCCTACCATAACCCAAGTAGTACTAAGAGCAGGGACACCTGTGTGTTCCACCTTTTTCTaGGATTTGACTTTCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: VCVLPTITQVVLRAGTPVCSTFF*DLTFFF Trigger: GAAGAAGAAAGTCAAATCCAAGAAAAAGGTGGAACA...CACAGGTGTCCCTGCTCTTAGTACTACTTGGGTTATGGTAGGCAGGACACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| CDS-3UTR CAA 90 bp | CTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAACAATGCAAGGACCCACTGTCCACTTTTaGGGTTCTGAAGCCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: LDRDENSTHSIISVTMQGPTVHF*GSEASV Trigger: GACAGAGGCTTCAGAACCCAAAAAGTGGACAGTGGG...TCCTTGCATTGTTACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CAA 90 bp | ATGTCACATGGGTCTCTGTATCAGGAGCTCCATGAAGATTGCTGTGATTTGGGATCCTTCCTTTGTTTTTaGGACTTCCTACCAGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: MSHGSLYQELHEDCCDLGSFLCF*DFLPAL Trigger: CAAAGCTGGTAGGAAGTCCAAAAAACAAAGGAAGGA...TCCCAAATCACAGCAATCTTCATGGAGCTCCTGATACAGAGACCCATGTGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| CDS-3UTR CAA 90 bp | CTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAACAATGCAAGGAACGATCAATCTCTTCTaGCAAGGCCTTCCGTCTCAC | + |
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Preference number: 5 (lower is better) Translates to: LDRDENSTHSIISVTMQGTINLF*QGLPSH Trigger: GTGAGACGGAAGGCCTTGCAAGAAGAGATTGATCGT...TCCTTGCATTGTTACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CAA 90 bp | TTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTACCCACTGTCCACTTTTaGGGTTCTGAAGCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FIPELDRDENSTHSIISVPTVHF*GSEASV Trigger: GACAGAGGCTTCAGAACCCAAAAAGTGGACAGTGGG...TACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CAA 90 bp | TTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAGTTCCCGTCCACTTTTaGGGTTCTGAAGCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FIPELDRDENSTHSIISVVPVHF*GSEASV Trigger: GACAGAGGCTTCAGAACCCAAAAAGTGGACGGGAAC...TACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CAA 90 bp | AGGGAGAAGGAAAACAAACTTGCAAGTCATGGCATATCACTTGCTTTCTGCACTATTTCTGAAGACTTTTaGTCCAGGGCCATGTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: REKENKLASHGISLAFCTISEDF*SRAMLD Trigger: GTCCAACATGGCCCTGGACAAAAAGTCTTCAGAAAT...AGTGCAGAAAGCAAGTGATATGCCATGACTTGCAAGTTTGTTTTCCTTCTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CAA 90 bp | AGGATATTGCTTAAGTGCCACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCTCCTTCCTTTGTTTTTaGGACTTCCTACCAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RILLKCHQAGKKCLRESVSFLCF*DFLPAL Trigger: CAAAGCTGGTAGGAAGTCCAAAAAACAAAGGAAGGA...GACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTGGCACTTAAGCAATATCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| CDS-3UTR CAA 90 bp | GCTGATACAGGAAAAACTACAAAGCTGAATGACGCCATCACAGGTTCCCTGAGGTGTTCCACCTTTTTCTaGGATTTGACTTTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ADTGKTTKLNDAITGSLRCSTFF*DLTFFF Trigger: GAAGAAGAAAGTCAAATCCAAGAAAAAGGTGGAACA...CCTCAGGGAACCTGTGATGGCGTCATTCAGCTTTGTAGTTTTTCCTGTATCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| CDS-3UTR CAA 90 bp | CACCAAGCTGGTAAGAAATGCCTGAGAGAATCAGTCAAGTTCAAGGTTGTGTTACTGGTTCTGAGACATTaGCAACCACTCTCTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HQAGKKCLRESVKFKVVLLVLRH*QPLSFS Trigger: AGAAAAAGAGAGTGGTTGCAAATGTCTCAGAACCAG...TAACACAACCTTGAACTTGACTGATTCTCTCAGGCATTTCTTACCAGCTTGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CAA 90 bp | TTATTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTACGATCAATCTCTTCTaGCAAGGCCTTCCGTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LFIPELDRDENSTHSIISTINLF*QGLPSH Trigger: GTGAGACGGAAGGCCTTGCAAGAAGAGATTGATCGT...ACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CAA 90 bp | TTATTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTTGCAACTTGATAGACTaGGAGGCATTCCGGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LFIPELDRDENSTHSIISCNLID*EAFRSM Trigger: CATTGACCGGAATGCCTCCAAGTCTATCAAGTTGCA...ACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CAA 90 bp | CTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTGTAACAATGCAAGGACTGGTTCTGAGACATTaGCAACCACTCTCTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LDRDENSTHSIISVTMQGLVLRH*QPLSFS Trigger: AGAAAAAGAGAGTGGTTGCAAATGTCTCAGAACCAG...TCCTTGCATTGTTACACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CAA 90 bp | TTATTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTATTTCTGAAGACTTTTaGTCCAGGGCCATGTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LFIPELDRDENSTHSIISISEDF*SRAMLD Trigger: GTCCAACATGGCCCTGGACAAAAAGTCTTCAGAAAT...ACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS-3UTR CAA 90 bp | TTATTTATCCCTGAACTTGATAGAGATGAGAACAGCACCCATTCCATAATTAGTCTGGTTCTGAGACATTaGCAACCACTCTCTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFIPELDRDENSTHSIISLVLRH*QPLSFS Trigger: AGAAAAAGAGAGTGGTTGCAAATGTCTCAGAACCAG...ACTAATTATGGAATGGGTGCTGTTCTCATCTCTATCAAGTTCAGGGATAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS CCA 72 bp | CGCGCAGCCGCGATCCGGAAGTCAGCTTCGACTTTCTaGCCCGCCCCCTCGAAATCCTTCTCCTTCCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RAAAIRKSASTF*PAPSKSFSFRV Trigger: GACCCGGAAGGAGAAGGATTTCGAGGGGGCGGGCCAGAAAGTCGAAGCTGACTTCCGGATCGCGGCTGCGCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063607.12 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS TCA 72 bp | CTTTCTTCAGGCTGTTCTCCACAGAGACCCTGGAGTTaGCCAGGAGGATGTCTCCCTCCTGGTGGGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSSGCSPQRPWS*PGGCLPPGGSS Trigger: AGAAGACCCACCAGGAGGGAGACATCCTCCTGGTCAACTCCAGGGTCTCTGTGGAGAACAGCCTGAAGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| CDS GCA 72 bp | TCTCTGATGAGGCCTTCTGCTGACTGCTCAAGGGCCTaGCTTCTAGGGCTAGGTGACTTTTTCTGCCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLMRPSADCSRA*LLGLGDFFCLA Trigger: GGCAAGGCAGAAAAAGTCACCTAGCCCTAGAAGGCAGGCCCTTGAGCAGTCAGCAGAAGGCCTCATCAGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 ENSMUST00000152309.3 |
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| CDS CAA 72 bp | GCCTCTGTCTTGACCGACAAACCCACTGTCCACTTTTaGGGTTCTGAAGCCTCTGTCTTGCCCGACTCACGA | + |
|
Preference number: 6 (lower is better) Translates to: ASVLTDKPTVHF*GSEASVLPDSR Trigger: TCGTGAGTCGGGCAAGACAGAGGCTTCAGAACCCAAAAAGTGGACAGTGGGTTTGTCGGTCAAGACAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS CAA 72 bp | GGGAGGTCTTCAGCCCTGAGCCTTGGGAGGCAGCCTTaGATAAGGACTTCCGCCTCTTCTTTTTCTTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GRSSALSLGRQP*IRTSASSFSSL Trigger: GAGAGAAGAAAAAGAAGAGGCGGAAGTCCTTATCAAAGGCTGCCTCCCAAGGCTCAGGGCTGAAGACCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 ENSMUST00000152309.3 |
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| CDS CAA 72 bp | AGCCTCTGTCTTGCCCGACTCACGATCAATCTCTTCTaGCAAGGCCTTCCGTCTCACCTCCTTGGCATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLCLARLTINLF*QGLPSHLLGML Trigger: AAGCATGCCAAGGAGGTGAGACGGAAGGCCTTGCAAGAAGAGATTGATCGTGAGTCGGGCAAGACAGAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126792.9 |
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| CDS CAA 90 bp | GGTTCTGAAGCCTCTGTCTTGACCGACAAACCCACTGTCCACTTTTaGGGTTCTGAAGCCTCTGTCTTGCCCGACTCACGATCAATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSEASVLTDKPTVHF*GSEASVLPDSRSIS Trigger: AGAGATTGATCGTGAGTCGGGCAAGACAGAGGCTTCAGAACCCAAAAAGTGGACAGTGGGTTTGTCGGTCAAGACAGAGGCTTCAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS TCA 72 bp | CTTGACCGACAAACCCACTGTCCACTTTTTGGGTTCTaGAGCCTCTGTCTTGCCCGACTCACGATCAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: LDRQTHCPLFGF*SLCLARLTINL Trigger: GAGATTGATCGTGAGTCGGGCAAGACAGAGGCTTCAGAACCCAAAAAGTGGACAGTGGGTTTGTCGGTCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS CAA 90 bp | GGGGCCTTCGGGCTGTCTATTGGAACGAACTCCAAAGCTTCACTTTaGACTGACTTCTTACTCCCTTTCTTCAGGCTGTTCTCCACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GAFGLSIGTNSKASL*TDFLLPFFRLFSTE Trigger: CTCTGTGGAGAACAGCCTGAAGAAAGGGAGTAAGAAGTCAGTCAAAAGTGAAGCTTTGGAGTTCGTTCCAATAGACAGCCCGAAGGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| CDS TCA 72 bp | TTCCCGTCCACTTTTTGGGTTCTGAAGCCTCTGTCTTaGCCGACAAACCCACTGTCCACTTTTTGGGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: FPSTFWVLKPLS*PTNPLSTFWVL Trigger: CAGAACCCAAAAAGTGGACAGTGGGTTTGTCGGTCAAGACAGAGGCTTCAGAACCCAAAAAGTGGACGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS CAA 72 bp | GTTCCCGTCCACTTTTTGGGTTCTGAAGCCTCTGTCTaGACCGACAAACCCACTGTCCACTTTTTGGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VPVHFLGSEASV*TDKPTVHFLGS Trigger: AGAACCCAAAAAGTGGACAGTGGGTTTGTCGGTCAAGACAGAGGCTTCAGAACCCAAAAAGTGGACGGGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000033277.9 ENSMUST00000063607.12 ENSMUST00000106549.9 ENSMUST00000106550.11 ENSMUST00000116280.9 ENSMUST00000126792.9 |
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| CDS CAA 72 bp | GGGCTGTCTATTGGAACGAACTCCAAAGCTTCACTTTaGACTGACTTCTTACTCCCTTTCTTCAGGCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GLSIGTNSKASL*TDFLLPFFRLF Trigger: GAACAGCCTGAAGAAAGGGAGTAAGAAGTCAGTCAAAAGTGAAGCTTTGGAGTTCGTTCCAATAGACAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
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| CDS TCA 72 bp | GGCTGTCTATTGGAACGAACTCCAAAGCTTCACTTTTaGCTGACTTCTTACTCCCTTTCTTCAGGCTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GCLLERTPKLHF*LTSYSLSSGCS Trigger: AGAACAGCCTGAAGAAAGGGAGTAAGAAGTCAGTCAAAAGTGAAGCTTTGGAGTTCGTTCCAATAGACAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106550.11 ENSMUST00000116280.9 |
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