Pregenerated sensors for KNL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027326Ensembl transcript IDs: ENSMUST00000028799.12, ENSMUST00000028802.3, ENSMUST00000099542.9, ENSMUST00000152380.8
Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTaGAGCCATAGATATGTTCTACCAGAACCTGATAGAAGTGTTTCC | + |
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Preference number: 1 (lower is better) Translates to: SHEIMWSPSFSDLSI*SHRYVLPEPDRSVS Trigger: GGAAACACTTCTATCAGGTTCTGGTAGAACATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTCATGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| 3UTR TCA 90 bp | GATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTaGCCTCTAATAATTCTACACAGGAATATTTCACTAACCTATAGT | + |
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Preference number: 1 (lower is better) Translates to: DYRYRPSCHGKSFTN*PLIILHRNISLTYS Trigger: ACTATAGGTTAGTGAAATATTCCTGTGTAGAATTATTAGAGGTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| 3UTR-3UTR TCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATCTGTATAGCCTGGGCTaGTCTGGAACTCACTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: EIMWSPSFSDLSICSHRYLYSLG*SGTHSV Trigger: TACAGAGTGAGTTCCAGATCAGCCCAGGCTATACAG...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| 3UTR-3UTR TCA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGCTAGATAACAAGAAATaGTTAGCTAGGCAGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: VDRARLEVMRSCGLPLSVLDNKK*LARQWW Trigger: CCACCACTGCCTAGCTAATCATTTCTTGTTATCTAG...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| 3UTR CAA 90 bp | GTATTTTGTTTTTCAACCAGGTCTCCTAGACAGCCCAGGCTAGCCTaGATCTTCTCTCACTGGAATCCTGAGATTATAAGCGTTTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: VFCFSTRSPRQPRLA*IFSHWNPEIISVCL Trigger: GAGGCAAACGCTTATAATCTCAGGATTCCAGTGAGAGAAGATCAAGGCTAGCCTGGGCTGTCTAGGAGACCTGGTTGAAAAACAAAATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| 3UTR-3UTR CCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATTTTCTCTGTATAGCCTaGGCTGATCTGGAACTCACT | + |
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Preference number: 2 (lower is better) Translates to: EIMWSPSFSDLSICSHRYFLCIA*ADLELT Trigger: AGTGAGTTCCAGATCAGCCCAGGCTATACAGAGAAA...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| 3UTR-3UTR CCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATTGTACCACCACCACCTaGCAGAATTTTGCTACTTTT | + |
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Preference number: 2 (lower is better) Translates to: EIMWSPSFSDLSICSHRYCTTTT*QNFATF Trigger: AAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACA...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| 3UTR-3UTR CCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTTTGATCTTCTCTCACTaGAATCCTGAGATTATAAGC | + |
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Preference number: 2 (lower is better) Translates to: DNSKQITCYLRPHHFQLGLIFSH*NPEIIS Trigger: GCTTATAATCTCAGGATTCCAGTGAGAGAAGATCAA...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| 3UTR TCA 72 bp | GCCCAGGCTAGCCTTGATCTTCTCTCACTGGAATCCTaGGATTATAAGCGTTTGCCTCTATATGGGGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: AQASLDLLSLES*DYKRLPLYGAW Trigger: CCAGGCCCCATATAGAGGCAAACGCTTATAATCTCAGGATTCCAGTGAGAGAAGATCAAGGCTAGCCTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| 3UTR-3UTR CAA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAACAGCCCAGGCTAGCCTaGATCTTCTCTCACTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: RTARATQRHPVSKNQKPKQPRLA*IFSHWN Trigger: ATTCCAGTGAGAGAAGATCAAGGCTAGCCTGGGCTG...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| 3UTR TCA 72 bp | GTCATGAGATCATGTGGTCTCCCTCTTTCAGTGATCTaGGTATCTGCAGCCATAGATATGTTCTACCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: VMRSCGLPLSVI*VSAAIDMFYQN Trigger: GTTCTGGTAGAACATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTCATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| 3UTR-3UTR CAA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTCCACCTGGCAGAATTTaGCTACTTTTATATGATGTT | + |
|
Preference number: 3 (lower is better) Translates to: DNSKQITCYLRPHHFQLGPPGRI*LLLYDV Trigger: AACATCATATAAAAGTAGCAAAATTCTGCCAGGTGG...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| 3UTR TCA 72 bp | TATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTaGCCTCTAATAATTCTACACAGGAATATTTCACTA | + |
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Preference number: 3 (lower is better) Translates to: YRPSCHGKSFTN*PLIILHRNISL Trigger: TAGTGAAATATTCCTGTGTAGAATTATTAGAGGTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR TCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTCCACATTTGAGGTCCTaGAGAGGACTCCTTGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPPHLRS*RGLLGG Trigger: ACCCCCAAGGAGTCCTCTTCAGGACCTCAAATGTGG...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR CCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTGGCTGTTTTCTTCTCTaGAGCTGGAGCTGTAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRGCFLL*SWSCSS Trigger: GGAGCTACAGCTCCAGCTCCAGAGAAGAAAACAGCC...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR TCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTTGGACTTTGTTGGGCTaGGAGATGAGGCTGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPWTLLG*EMRLRS Trigger: GCTTCTCAGCCTCATCTCTCAGCCCAACAAAGTCCA...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR CCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTGGAAGTTCCTGCCAATaGCACAAAACTGAAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRGSSCQ*HKTEAL Trigger: AAGGGCTTCAGTTTTGTGCCATTGGCAGGAACTTCC...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR TCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATCCACATTTGAGGTCCTaGAGAGGACTCCTTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYPHLRS*RGLLGG Trigger: ACCCCCAAGGAGTCCTCTTCAGGACCTCAAATGTGG...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS-3UTR TCA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGCCAATGGCACAAAACTaGAGCCCTTTCTGTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VDRARLEVMRSCGLPLSVPMAQN*SPFCLP Trigger: TGGAAGACAGAAAGGGCTTCAGTTTTGTGCCATTGG...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS-3UTR CCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTCTATTTTGGCCTCCGTaGATGGAGGAATCCAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPLFWPP*MEESKS Trigger: AGACTTGGATTCCTCCATCCACGGAGGCCAAAATAG...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR CCA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGCTATTTTGGCCTCCGTaGATGGAGGAATCCAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: VDRARLEVMRSCGLPLSVLFWPP*MEESKS Trigger: AGACTTGGATTCCTCCATCCACGGAGGCCAAAATAG...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS-3UTR CCA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGAGTTTTCTCTCTGAGTaGGCCAGCATCTGGATTGGT | + |
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Preference number: 4 (lower is better) Translates to: VDRARLEVMRSCGLPLSVSFLSE*ASIWIG Trigger: ACCAATCCAGATGCTGGCCCACTCAGAGAGAAAACT...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS-3UTR TCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTTTTGATTTCCACATTTaGGGTCCTGAAGAGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPFDFHI*GPEEDS Trigger: GGAGTCCTCTTCAGGACCTCAAATGTGGAAATCAAA...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR TCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTGGTTCCTGGTTTGTTTaGTTTCCACATTTGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPGSWFV*FPHLRS Trigger: GGACCTCAAATGTGGAAATCAAACAAACCAGGAACC...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR TCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTTTGAGTGACTTCTTTTaGAGGACAAGGTGGAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRLSDFF*RTRWKD Trigger: GTCTTTCCACCTTGTCCTTCAAAAGAAGTCACTCAA...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR TCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATTGGACTTTGTTGGGCTaGGAGATGAGGCTGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYWTLLG*EMRLRS Trigger: GCTTCTCAGCCTCATCTCTCAGCCCAACAAAGTCCA...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS-3UTR TCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTGGTAAACTCTCTCTCTaGGATGTGTCAATCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRGKLSL*DVSIRT Trigger: TGTTCTGATTGACACATCTCAGAGAGAGAGTTTACC...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR GCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTCATTACAGTGTGACTTaGTGTCAGATCCATCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRHYSVT*CQIHLV Trigger: AACCAGATGGATCTGACAGCAAGTCACACTGTAATG...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR GCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTTGCTCCTTCAGCATTTaGATGCGTCTGAATGACTTG | + |
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Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPCSFSI*MRLNDL Trigger: CAAGTCATTCAGACGCATGCAAATGCTGAAGGAGCA...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR GCA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGTGCTCCTTCAGCATTTaGATGCGTCTGAATGACTTG | + |
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Preference number: 4 (lower is better) Translates to: VDRARLEVMRSCGLPLSVCSFSI*MRLNDL Trigger: CAAGTCATTCAGACGCATGCAAATGCTGAAGGAGCA...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS-3UTR TCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTATCTGTGTGACTGTATaGGTTTCTGACTCTATAGGA | + |
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Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRICVTV*VSDSIG Trigger: TCCTATAGAGTCAGAAACTCATACAGTCACACAGAT...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR TCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACCCAATGGCACAAAACTaGAGCCCTTTCTGTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDPMAQN*SPFCLP Trigger: TGGAAGACAGAAAGGGCTTCAGTTTTGTGCCATTGG...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR TCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTCTCATACTATGTGCCTaGCTTCCTTCTTCAAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPLILCA*LPSSSN Trigger: GTTACTTGAAGAAGGAAGTCAGGCACATAGTATGAG...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR TCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAATATTACGCTGTGTGCTaGCATCCAGAGAGAGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKYYAVC*HPERVH Trigger: ATGGACTCTCTCTGGATGTCAGCACACAGCGTAATA...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS-3UTR GCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTTGGTTTGGAAGTTCCTaGCAATGGCACAAAACTGAA | + |
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Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPWFGSS*QWHKTE Trigger: TTCAGTTTTGTGCCATTGGCAGGAACTTCCAAACCA...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR CCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTAGGAATACTTGTCACTaGATCTACAAACATCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRRNTCH*IYKHQL Trigger: CAGCTGATGTTTGTAGATCCAGTGACAAGTATTCCT...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR CCA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGAACTGTGATTCCATTTaGCTATTACGCTGTGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VDRARLEVMRSCGLPLSVNCDSI*LLRCVL Trigger: CAGCACACAGCGTAATAGCCAAATGGAATCACAGTT...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| 3UTR CAA 72 bp | TTTTCAACCAGGTCTCCTAGACAGCCCAGGCTAGCCTaGATCTTCTCTCACTGGAATCCTGAGATTATAAGC | + |
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Preference number: 4 (lower is better) Translates to: FSTRSPRQPRLA*IFSHWNPEIIS Trigger: GCTTATAATCTCAGGATTCCAGTGAGAGAAGATCAAGGCTAGCCTGGGCTGTCTAGGAGACCTGGTTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS-3UTR TCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAAGGTTCCTGGTTTGTTTaGTTTCCACATTTGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKGSWFV*FPHLRS Trigger: GGACCTCAAATGTGGAAATCAAACAAACCAGGAACC...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS-3UTR TCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTGTTGCAGTCTGTAATTaGGAACTCCTTTTGTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPVAVCN*ELLLLH Trigger: ATGCAACAAAAGGAGTTCTCAATTACAGACTGCAAC...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR TCA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGCATCTGGTTTTCATCTaGAAAGATGACTGTCTGATC | + |
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Preference number: 4 (lower is better) Translates to: VDRARLEVMRSCGLPLSVHLVFI*KDDCLI Trigger: GATCAGACAGTCATCTTTTCAGATGAAAACCAGATG...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS-3UTR TCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTGACTGTATGAGTTTCTaGCTCTATAGGATGACATTT | + |
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Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRDCMSF*LYRMTF Trigger: AAATGTCATCCTATAGAGTCAGAAACTCATACAGTC...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR TCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTCCTTTTCTCATCTTTTaGCATAGGCATAAGATTTCG | + |
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Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRPFLIF*HRHKIS Trigger: CGAAATCTTATGCCTATGTCAAAAGATGAGAAAAGG...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR TCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTCACTTTCAGTTTGAGTaGCTTCTTTTGAAGGACAAG | + |
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Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPHFQFE*LLLKDK Trigger: CTTGTCCTTCAAAAGAAGTCACTCAAACTGAAAGTG...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR TCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTAAGAGATACATGCTTTaGGTTAAATGTAGCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRKRYML*VKCSHL Trigger: GAGATGGCTACATTTAACTCAAAGCATGTATCTCTT...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR TCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACACATCCTGCCCTTTTTaGGTTGATGGACTTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDTSCPF*VDGLCW Trigger: CCAACAAAGTCCATCAACTCAAAAAGGGCAGGATGT...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR TCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAAGCATCTGGGGCACCTaGTGCTGTGCTGTGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQSIWGT*CCAVHF Trigger: GAAATGCACAGCACAGCATCAGGTGCCCCAGATGCT...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACAGACAGCTTACCTCTTaGTCTTGTGCACTGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDRQLTS*SCALSC Trigger: ACATGACAGTGCACAAGATCAAGAGGTAAGCTGTCT...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR GCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTAAAGGAAGTTTAGAATaGTGGCCTAGCACTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPKGSLE*WPSTTC Trigger: ACAAGTAGTGCTAGGCCAGCATTCTAAACTTCCTTT...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR GCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACCAAATTCAGTTTGGCTaGAACAGATCCAATGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDQIQFG*NRSNAW Trigger: CCAGGCATTGGATCTGTTGCAGCCAAACTGAATTTG...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR GCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAACCTGATGCTGTGCTGTaGATTTCTTCTTCCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKPDAVL*ISSSRI Trigger: AATCCTGGAAGAAGAAATGCACAGCACAGCATCAGG...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTTACCTCTTGATCTTGTaGACTGTCATGTGTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPYLLIL*TVMCSD Trigger: ATCAGAACACATGACAGTGCACAAGATCAAGAGGTA...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTGCATGTTTCCTTTCATaGTTGCAGTCTGTAATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPACFLS*LQSVIE Trigger: CTCAATTACAGACTGCAACCATGAAAGGAAACATGC...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATGGAAGTTCCTGCCAATaGCACAAAACTGAAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYGSSCQ*HKTEAL Trigger: AAGGGCTTCAGTTTTGTGCCATTGGCAGGAACTTCC...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACCAGACAAAACTGGTTTaGAAGTTCCTGCCAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDQTKLV*KFLPMA Trigger: TGCCATTGGCAGGAACTTCCAAACCAGTTTTGTCTG...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAACAGACAAAACTGGTTTaGAAGTTCCTGCCAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKQTKLV*KFLPMA Trigger: TGCCATTGGCAGGAACTTCCAAACCAGTTTTGTCTG...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGAGGAATACTTGTCACTaGATCTACAAACATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VDRARLEVMRSCGLPLSVRNTCH*IYKHQL Trigger: CAGCTGATGTTTGTAGATCCAGTGACAAGTATTCCT...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTACTCATTTTCCCATGTaGATGCAGCGACATTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPTHFPM*MQRHFL Trigger: TAGAAAATGTCGCTGCATCCACATGGGAAAATGAGT...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR TCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACAGAGATGCATGCATTTaGTATGTTGAAGAGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDRDACI*YVEEAL Trigger: CAGTGCCTCTTCAACATATCAAATGCATGCATCTCT...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR TCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACTCTATTGCAACGGTGTaGCTTTTGGTAATGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDSIATV*LLVMSM Trigger: CATGGACATTACCAAAAGTCACACCGTTGCAATAGA...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR TCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATCTGTGCAACTCTTGGTaGTATCCATATCACCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYLCNSW*YPYHPH Trigger: ATGAGGGTGATATGGATATCACCAAGAGTTGCACAG...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTGACAGTTTTATATTCTaGAGCAGTGGTTTGACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPDSFIF*SSGLTY Trigger: ATAGGTCAAACCACTGCTTCAGAATATAAAACTGTC...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR TCA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGGACAGTTTTATATTCTaGAGCAGTGGTTTGACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VDRARLEVMRSCGLPLSVDSFIF*SSGLTY Trigger: ATAGGTCAAACCACTGCTTCAGAATATAAAACTGTC...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATACATCCTGCCCTTTTTaGGTTGATGGACTTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYTSCPF*VDGLCW Trigger: CCAACAAAGTCCATCAACTCAAAAAGGGCAGGATGT...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAAGCCACTTTTCCTTGGTaGTTGAAGACTTTTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKATFPW*LKTFVI Trigger: GATGACAAAAGTCTTCAATCACCAAGGAAAAGTGGC...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTTACTTTTATAGTATCTaGAAAGCTGACTCGACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPYFYSI*KADSTR Trigger: TCTCGTCGAGTCAGCTTTGCAGATACTATAAAAGTA...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR GCA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTCATTTAAAGGGCTTTTaGTGTGAGAGTATGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RFCYVALASLKVTAVPFPHLKGF*CESMIW Trigger: CCAAATCATACTCTCACAGCAAAAGCCCTTTAAATG...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR GCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTATTATTTATTTCTACTaGAGAACTCTGAGGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRIIYFY*RTLRDL Trigger: GAGATCCCTCAGAGTTCTGCAGTAGAAATAAATAAT...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR GCA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGTATACTCATACTATGTaGCTGACTTCCTTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VDRARLEVMRSCGLPLSVYTHTM*LTSFFK Trigger: CTTGAAGAAGGAAGTCAGGCACATAGTATGAGTATA...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTGACTTAAGGAAACTGTaGAACATGCTAAATCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRDLRKL*NMLNPF Trigger: AAAAGGATTTAGCATGTTCCACAGTTTCCTTAAGTC...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTATACCCCTCAATAGCTaGACTAGAACATATAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRIPLNS*TRTYRF Trigger: AAATCTATATGTTCTAGTCCAGCTATTGAGGGGTAT...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGCCAATTACAATAGTGTaGCTCTTGGTTAGATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: VDRARLEVMRSCGLPLSVPITIV*LLVRSI Trigger: TATGGATCTAACCAAGAGCCACACTATTGTAATTGG...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTCTTTCTGCTGTAAGTTaGCTGTTTTTGTGTTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRLSAVS*LFLCSK Trigger: TTTAGAACACAAAAACAGCCAACTTACAGCAGAAAG...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGTCAATGAAAACAGTATaGGACTTGGTCATGTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VDRARLEVMRSCGLPLSVSMKTV*DLVMSS Trigger: ACTAGACATGACCAAGTCCCATACTGTTTTCATTGA...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTGTAGGCTTTCCTTTTTaGATAATTGAAAGTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRVGFPF*IIESQV Trigger: GACTTGACTTTCAATTATCCAAAAAGGAAAGCCTAC...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTTCTTGCTTGGTAATTTaGGTAAAAATATCCCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QSPFLSLQSAGITGIGHRSCLVI*VKISPM Trigger: CATTGGGGATATTTTTACCCAAATTACCAAGCAAGA...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATCCAAGAAGCCTACAATaGTTCACTACCAGTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYPRSLQ*FTTSES Trigger: ACTCTCACTGGTAGTGAACCATTGTAGGCTTCTTGG...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACCATCTGGTTTTCATCTaGAAAGATGACTGTCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDHLVFI*KDDCLI Trigger: GATCAGACAGTCATCTTTTCAGATGAAAACCAGATG...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR TCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATAGAGATGCATGCATTTaGTATGTTGAAGAGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYRDACI*YVEEAL Trigger: CAGTGCCTCTTCAACATATCAAATGCATGCATCTCT...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAAATCTGTGTGACTGTATaGGTTTCTGACTCTATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKICVTV*VSDSIG Trigger: TCCTATAGAGTCAGAAACTCATACAGTCACACAGAT...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATAATGTGCTGGCACTTTaGCTAGAAATCTGTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYNVLAL*LEICVT Trigger: AGTCACACAGATTTCTAGTCAAAGTGCCAGCACATT...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAATCTAAGAACTTTCTCTaGAGCTCCTCTTCTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKSKNFL*SSSSSV Trigger: AACTGAAGAAGAGGAGCTTCAGAGAAAGTTCTTAGA...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAAAAGGTAAATACAGCTTaGTCATCACTCCACTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKKVNTA*SSLHSM Trigger: CATTGAGTGGAGTGATGATCAAGCTGTATTTACCTT...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATCATTACAGTGTGACTTaGTGTCAGATCCATCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYHYSVT*CQIHLV Trigger: AACCAGATGGATCTGACAGCAAGTCACACTGTAATG...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACAAATCCAGGCTTTTGTaGATCATTAGTTTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDKSRLL*IISFLS Trigger: GGAGAGGAAACTAATGATGCACAAAAGCCTGGATTT...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR GCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACCTCTGTTTGATCCTTTaGCAGGTTAAGAGATACATG | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDLCLIL*QVKRYM Trigger: CATGTATCTCTTAACCTGGCAAAGGATCAAACAGAG...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR GCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAAAGACTGAAAACTGAGTaGATTAATCTTCCTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKRLKTE*INLPAS Trigger: GCTTGCAGGAAGATTAATGCACTCAGTTTTCAGTCT...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAGGGCACCTGATGCTGTaGTGTGCATTTCTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQGHLML*CAFLLP Trigger: TGGAAGAAGAAATGCACAGCACAGCATCAGGTGCCC...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACGCTTTTCCTTTTTCTTaGAGGATTAGGTTCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDAFPFS*RIRFLV Trigger: AACCAGGAACCTAATCCTCCAAGAAAAAGGAAAAGC...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACCATCTGAGTCTGAATTaGAGCACAAAGCAAAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDHLSLN*STKQSV Trigger: AACACTTTGCTTTGTGCTCCAATTCAGACTCAGATG...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACGGAAGTTTAGAATGCTaGCCTAGCACTACTTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDGSLEC*PSTTCL Trigger: TAAACAAGTAGTGCTAGGCCAGCATTCTAAACTTCC...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACAAACAGTATGGGACTTaGTCATGTCTAGTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDKQYGT*SCLVPH Trigger: ATGAGGAACTAGACATGACCAAGTCCCATACTGTTT...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGAATCCCATTCTTCCATaGCATCATTTTTCTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VDRARLEVMRSCGLPLSVNPILP*HHFSLH Trigger: ATGAAGAGAAAAATGATGCCATGGAAGAATGGGATT...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAAGACTGTATGAGTTTCTaGCTCTATAGGATGACATTT | + |
|
Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKDCMSF*LYRMTF Trigger: AAATGTCATCCTATAGAGTCAGAAACTCATACAGTC...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAACCTTTTCTCATCTTTTaGCATAGGCATAAGATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKPFLIF*HRHKIS Trigger: CGAAATCTTATGCCTATGTCAAAAGATGAGAAAAGG...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATCACTTTCAGTTTGAGTaGCTTCTTTTGAAGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYHFQFE*LLLKDK Trigger: CTTGTCCTTCAAAAGAAGTCACTCAAACTGAAAGTG...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAATCCATCAGACTTGATTaGATCCAGAGAGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQSIRLD*IQRAAA Trigger: TGCAGCAGCTCTCTGGATTCAATCAAGTCTGATGGA...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAAGAGTCCATCAGACTTaGTTGAATCCAGAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQRVHQT*LNPESC Trigger: GCAGCTCTCTGGATTCAATCAAGTCTGATGGACTCT...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAATTTATAAATTCTATCTaGGCAAGGGTCTGCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKFINSI*ARVCVF Trigger: GAAAACGCAGACCCTTGCTCAGATAGAATTTATAAA...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATTTCAACCTGACCACGTaGATGCAAAATGGTTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYFNLTT*MQNGFR Trigger: TCTAAAACCATTTTGCATGCACGTGGTCAGGTTGAA...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATCTCTGTTTGATCCTTTaGCAGGTTAAGAGATACATG | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYLCLIL*QVKRYM Trigger: CATGTATCTCTTAACCTGGCAAAGGATCAAACAGAG...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACTATACTCATACTATGTaGCTGACTTCCTTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDYTHTM*LTSFFK Trigger: CTTGAAGAAGGAAGTCAGGCACATAGTATGAGTATA...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR GCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAAAATCTCTTGATCTTGTaGACTGTCATGTGTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKNLLIL*TVMCSD Trigger: ATCAGAACACATGACAGTGCACAAGATCAAGAGATT...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAAAGTTATCTCAAACTTTaGAAATGCTGCACAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKSYLKL*KCCTTG Trigger: TCCAGTTGTGCAGCATTTGCAAAGTTTGAGATAACT...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATGCTTTTCCTTTTTCTTaGAGGATTAGGTTCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYAFPFS*RIRFLV Trigger: AACCAGGAACCTAATCCTCCAAGAAAAAGGAAAAGC...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATCATCTGAGTCTGAATTaGAGCACAAAGCAAAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYHLSLN*STKQSV Trigger: AACACTTTGCTTTGTGCTCCAATTCAGACTCAGATG...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTGGCTGTTTTCTTCTCTaGAGCTGGAGCTGTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGGCFLL*SWSCSS Trigger: GGAGCTACAGCTCCAGCTCCAGAGAAGAAAACAGCC...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACTCAATGAAAACAGTATaGGACTTGGTCATGTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDSMKTV*DLVMSS Trigger: ACTAGACATGACCAAGTCCCATACTGTTTTCATTGA...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACTTTGTTTCAGCATATTaGCTTCCACTTCCTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDFVSAY*LPLPFL Trigger: AAGGAAAGGAAGTGGAAGCCAATATGCTGAAACAAA...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAATTTGTTTCAGCATATTaGCTTCCACTTCCTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKFVSAY*LPLPFL Trigger: AAGGAAAGGAAGTGGAAGCCAATATGCTGAAACAAA...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATTTTGGGAAAGAGCCTTaGAAAGCAGCATTTAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYFGKEP*KAAFSL Trigger: TAAACTAAATGCTGCTTTTCAAGGCTCTTTCCCAAA...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATTACTTTTATAGTATCTaGAAAGCTGACTCGACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYYFYSI*KADSTR Trigger: TCTCGTCGAGTCAGCTTTGCAGATACTATAAAAGTA...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACTGTTTGTATGCTTTCTaGTGTAAGTTGGCTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGITGIGHRVMVNPLPTDCLYAF*CKLAVF Trigger: AAAAACAGCCAACTTACAGCAGAAAGCATACAAACA...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCAGTTTTCTCTCTGAGTaGGCCAGCATCTGGATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NYCFEIRFCYVALASLKVSFLSE*ASIWIG Trigger: ACCAATCCAGATGCTGGCCCACTCAGAGAGAAAACT...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAATCTTGCTTGGTAATTTaGGTAAAAATATCCCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RTARATQRHPVSKNQKPKSCLVI*VKISPM Trigger: CATTGGGGATATTTTTACCCAAATTACCAAGCAAGA...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAATATAGTAAATTTGGCTaGGAGAGTGCTCTGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQYSKFG*ESALPR Trigger: CCTAGGCAGAGCACTCTCCCAGCCAAATTTACTATA...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAATCTATTGCAACGGTGTaGCTTTTGGTAATGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQSIATV*LLVMSM Trigger: CATGGACATTACCAAAAGTCACACCGTTGCAATAGA...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCCTGTGCAACTCTTGGTaGTATCCATATCACCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NYCFEIRFCYVALASLKVLCNSW*YPYHPH Trigger: ATGAGGGTGATATGGATATCACCAAGAGTTGCACAG...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR TCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAATTGAGTGACTTCTTTTaGAGGACAAGGTGGAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQLSDFF*RTRWKD Trigger: GTCTTTCCACCTTGTCCTTCAAAAGAAGTCACTCAA...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAAAGGCCTCTGTTTaGTCCTTTGCCAGGTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NYCFEIRFCYVALASLKVTKASV*SFARLR Trigger: TCTTAACCTGGCAAAGGATCAAACAGAGGCCTTTGT...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR TCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAACTCATACTATGTGCCTaGCTTCCTTCTTCAAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQLILCA*LPSSSN Trigger: GTTACTTGAAGAAGGAAGTCAGGCACATAGTATGAG...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTCATCACTCCACTCAATaGCATCCCACTCAGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGHHSTQ*HPTQTN Trigger: GTTTGTCTGAGTGGGATGTCATTGAGTGGAGTGATG...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATATTATTTATTTCTACTaGAGAACTCTGAGGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYIIYFY*RTLRDL Trigger: GAGATCCCTCAGAGTTCTGCAGTAGAAATAAATAAT...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAACTGCAACAGATCCAATaGCTGGATCTTTACTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQLQQIQ*LDLYYR Trigger: TCTGTAGTAAAGATCCAGGCATTGGATCTGTTGCAG...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATGACTTAAGGAAACTGTaGAACATGCTAAATCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYDLRKL*NMLNPF Trigger: AAAAGGATTTAGCATGTTCCACAGTTTCCTTAAGTC...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATGTAGGCTTTCCTTTTTaGATAATTGAAAGTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EIMWSPSFSDLSICSHRYVGFPF*IIESQV Trigger: GACTTGACTTTCAATTATCCAAAAAGGAAAGCCTAC...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCTGGGGGTTTCAAAATTaGGGAATGCTGTCTTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NYCFEIRFCYVALASLKVWGFQN*GMLSSN Trigger: GTTAGAAGACAGCATTCCTCAATTTTGAAACCCCCA...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR TCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAGTTGCAGTCTGTAATTaGGAACTCCTTTTGTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQVAVCN*ELLLLH Trigger: ATGCAACAAAAGGAGTTCTCAATTACAGACTGCAAC...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCAATGTGCTGGCACTTTaGCTAGAAATCTGTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: NYCFEIRFCYVALASLKVNVLAL*LEICVT Trigger: AGTCACACAGATTTCTAGTCAAAGTGCCAGCACATT...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR TCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTACAAAGGCCTCTGTTTaGTCCTTTGCCAGGTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGTKASV*SFARLR Trigger: TCTTAACCTGGCAAAGGATCAAACAGAGGCCTTTGT...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCATATTGTTAGCTGGCTaGCTTTTGCTGGTAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: NYCFEIRFCYVALASLKVILLAG*LLLVDG Trigger: ACCATCTACCAGCAAAAGGCAGCCAGCTAACAATAT...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR GCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAAAATCCAGGCTTTTGTaGATCATTAGTTTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQKSRLL*IISFLS Trigger: GGAGAGGAAACTAATGATGCACAAAAGCCTGGATTT...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCCTGCAACAGATCCAATaGCTGGATCTTTACTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: NYCFEIRFCYVALASLKVLQQIQ*LDLYYR Trigger: TCTGTAGTAAAGATCCAGGCATTGGATCTGTTGCAG...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR GCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTCAAATTCAGTTTGGCTaGAACAGATCCAATGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGQIQFG*NRSNAW Trigger: CCAGGCATTGGATCTGTTGCAGCCAAACTGAATTTG...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAGGAAGTTTAGAATGCTaGCCTAGCACTACTTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQGSLEC*PSTTCL Trigger: TAAACAAGTAGTGCTAGGCCAGCATTCTAAACTTCC...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAATATGCAGACAAAACTaGTTTGGAAGTTCCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQICRQN*FGSSCQ Trigger: TTGGCAGGAACTTCCAAACCAGTTTTGTCTGCATAT...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAACTCATTTTCCCATGTaGATGCAGCGACATTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQTHFPM*MQRHFL Trigger: TAGAAAATGTCGCTGCATCCACATGGGAAAATGAGT...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTTGGGGGTTTCAAAATTaGGGAATGCTGTCTTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGWGFQN*GMLSSN Trigger: GTTAGAAGACAGCATTCCTCAATTTTGAAACCCCCA...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAAAGAGATACATGCTTTaGGTTAAATGTAGCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQKRYML*VKCSHL Trigger: GAGATGGCTACATTTAACTCAAAGCATGTATCTCTT...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTGGTAAACTCTCTCTCTaGGATGTGTCAATCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGGKLSL*DVSIRT Trigger: TGTTCTGATTGACACATCTCAGAGAGAGAGTTTACC...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTGTCACCAAGAAACTGTaGTTCCATTTGGCTATTACG | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGVTKKL*FHLAIT Trigger: CGTAATAGCCAAATGGAATCACAGTTTCTTGGTGAC...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR TCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAACTTCTCATTCTCAGCTaGATGCACCAATTTGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQLLILS*MHQFVI Trigger: TATAACAAATTGGTGCATTCAGCTGAGAATGAGAAG...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCTTCAACCTGACCACGTaGATGCAAAATGGTTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: NYCFEIRFCYVALASLKVFNLTT*MQNGFR Trigger: TCTAAAACCATTTTGCATGCACGTGGTCAGGTTGAA...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR GCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTATATTGTTAGCTGGCTaGCTTTTGCTGGTAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGILLAG*LLLVDG Trigger: ACCATCTACCAGCAAAAGGCAGCCAGCTAACAATAT...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTTGGTTTGGAAGTTCCTaGCAATGGCACAAAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGWFGSS*QWHKTE Trigger: TTCAGTTTTGTGCCATTGGCAGGAACTTCCAAACCA...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCATATGCAGACAAAACTaGTTTGGAAGTTCCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NYCFEIRFCYVALASLKVICRQN*FGSSCQ Trigger: TTGGCAGGAACTTCCAAACCAGTTTTGTCTGCATAT...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR TCA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCTTTGGGAAAGAGCCTTaGAAAGCAGCATTTAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NYCFEIRFCYVALASLKVFGKEP*KAAFSL Trigger: TAAACTAAATGCTGCTTTTCAAGGCTCTTTCCCAAA...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR GCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTAAAGGAAGTTTAGAATaGTGGCCTAGCACTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGKGSLE*WPSTTC Trigger: ACAAGTAGTGCTAGGCCAGCATTCTAAACTTCCTTT...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCCACTGTTTGAGTCTTTaGAATAAACAGGTATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NYCFEIRFCYVALASLKVHCLSL*NKQVSQ Trigger: CTGAGATACCTGTTTATTCCAAAGACTCAAACAGTG...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCCCAATTACAATAGTGTaGCTCTTGGTTAGATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: NYCFEIRFCYVALASLKVPITIV*LLVRSI Trigger: TATGGATCTAACCAAGAGCCACACTATTGTAATTGG...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CCA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAACTTTCTGCTGTAAGTTaGCTGTTTTTGTGTTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQLSAVS*LFLCSK Trigger: TTTAGAACACAAAAACAGCCAACTTACAGCAGAAAG...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTAAACAGTATGGGACTTaGTCATGTCTAGTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGKQYGT*SCLVPH Trigger: ATGAGGAACTAGACATGACCAAGTCCCATACTGTTT...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTCACTTTAGAGATAATTaGAGCAATTTCATCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGHFRDN*SNFIMA Trigger: GGCCATGATGAAATTGCTGCAATTATCTCTAAAGTG...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTCACTGTTTGAGTCTTTaGAATAAACAGGTATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGHCLSL*NKQVSQ Trigger: CTGAGATACCTGTTTATTCCAAAGACTCAAACAGTG...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTCAAATGCTGCACAACTaGAGAATAAAAGCCTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGQMLHN*RIKASI Trigger: AATTGAGGCTTTTATTCTCCAGTTGTGCAGCATTTG...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR GCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTTGTTTGTATGCTTTCTaGTGTAAGTTGGCTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGCLYAF*CKLAVF Trigger: AAAAACAGCCAACTTACAGCAGAAAGCATACAAACA...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CCA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTATACCCCTCAATAGCTaGACTAGAACATATAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: DNSKQITCYLRPHHFQLGIPLNS*TRTYRF Trigger: AAATCTATATGTTCTAGTCCAGCTATTGAGGGGTAT...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS TCA 90 bp | ATTACGCTGTGTGCTGACATCCAGAGAGAGTCCATCAGACTTGATTaGATCCAGAGAGCTGCTGCAACTAGACGGTGTCCTGCTCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ITLCADIQRESIRLD*IQRAAATRRCPAQA Trigger: AGCCTGAGCAGGACACCGTCTAGTTGCAGCAGCTCTCTGGATTCAATCAAGTCTGATGGACTCTCTCTGGATGTCAGCACACAGCGTAAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028802.3 ENSMUST00000099542.9 |
||
| CDS-3UTR CAA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTAACCCGGGTTCTTTTTaGGGCCCTGCAGTTTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RFCYVALASLKVTAVPFPNPGSF*GPAVFG Trigger: ACCGAAAACTGCAGGGCCCAAAAAAGAACCCGGGTT...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS GCA 90 bp | CATGTCCTCGGGCCCATATGCAGACAAAACTGGTTTGGAAGTTCCTaGCAATGGCACAAAACTGAAGCCCTTTCTGTCTTCCAGCCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: HVLGPICRQNWFGSS*QWHKTEALSVFQPS Trigger: ACTAGGCTGGAAGACAGAAAGGGCTTCAGTTTTGTGCCATTGGCAGGAACTTCCAAACCAGTTTTGTCTGCATATGGGCCCGAGGACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
||
| CDS-3UTR CAA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGCCTGAAGAGGACTCCTaGGGGGTTTCAAAATTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VDRARLEVMRSCGLPLSVPEEDS*GVSKLR Trigger: CCTCAATTTTGAAACCCCCAAGGAGTCCTCTTCAGG...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGCCTGCCCTTTTTGAGTaGATGGACTTTGTTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VDRARLEVMRSCGLPLSVPALFE*MDFVGL Trigger: CAGCCCAACAAAGTCCATCAACTCAAAAAGGGCAGG...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTGCATCTGAGTCTGAATaGGAGCACAAAGCAAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QSPFLSLQSAGITGIGHRASESE*EHKAKC Trigger: ACACTTTGCTTTGTGCTCCAATTCAGACTCAGATGC...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTTCATTACAGTGTGACTaGCTGTCAGATCCATCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QSPFLSLQSAGITGIGHRSLQCD*LSDPSG Trigger: ACCAGATGGATCTGACAGCAAGTCACACTGTAATGA...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS CCA 90 bp | CTCGGGCCCATATGCAGACAAAACTGGTTTGGAAGTTCCTGCCAATaGCACAAAACTGAAGCCCTTTCTGTCTTCCAGCCTAGTTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LGPICRQNWFGSSCQ*HKTEALSVFQPSFI Trigger: AATGAAACTAGGCTGGAAGACAGAAAGGGCTTCAGTTTTGTGCCATTGGCAGGAACTTCCAAACCAGTTTTGTCTGCATATGGGCCCGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
||
| CDS-3UTR CAA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTAAAACAGTATGGGACTaGGTCATGTCTAGTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QSPFLSLQSAGITGIGHRKTVWD*VMSSSS Trigger: TGAGGAACTAGACATGACCAAGTCCCATACTGTTTT...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTACCTTTTGCCTCTGCTaGGTAGTCAATGAAAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: QSPFLSLQSAGITGIGHRTFCLC*VVNENS Trigger: ACTGTTTTCATTGACTACCAAGCAGAGGCAAAAGGT...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGGGACTCAAATTCAGTTaGGCTGCAACAGATCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VDRARLEVMRSCGLPLSVGLKFS*AATDPM Trigger: CATTGGATCTGTTGCAGCCAAACTGAATTTGAGTCC...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATAACCCGGGTTCTTTTTaGGGCCCTGCAGTTTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: EIMWSPSFSDLSICSHRYNPGSF*GPAVFG Trigger: ACCGAAAACTGCAGGGCCCAAAAAAGAACCCGGGTT...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTGCTTACCTCTTGATCTaGTGCACTGTCATGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RFCYVALASLKVTAVPFPAYLLI*CTVMCS Trigger: AGAACACATGACAGTGCACAAGATCAAGAGGTAAGC...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS TCA 90 bp | AAAGGCCTCTGTTTGATCCTTTGCCAGGTTAAGAGATACATGCTTTaGGTTAAATGTAGCCATCTCCCCCAGAGGCTCTTCTACCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: KGLCLILCQVKRYML*VKCSHLPQRLFYRI Trigger: GATCCGGTAGAAGAGCCTCTGGGGGAGATGGCTACATTTAACTCAAAGCATGTATCTCTTAACCTGGCAAAGGATCAAACAGAGGCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
||
| CDS GCA 90 bp | CCAGTGAGAGTTCTTGAAGCATCTGGGGCACCTGATGCTGTGCTGTaGATTTCTTCTTCCAGGATTCCTGTTCCTCAATGTACTGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PVRVLEASGAPDAVL*ISSSRIPVPQCTEK Trigger: TTTTTCAGTACATTGAGGAACAGGAATCCTGGAAGAAGAAATGCACAGCACAGCATCAGGTGCCCCAGATGCTTCAAGAACTCTCACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028802.3 ENSMUST00000099542.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACTTGAATTCTCCTATTTaGGCCTCCGTGGATGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AGITGIGHRVMVNPLPTDLNSPI*ASVDGG Trigger: TCCTCCATCCACGGAGGCCAAAATAGGAGAATTCAA...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTGGGCCAGCATCTGGATaGGTACATATTTTAGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: RFCYVALASLKVTAVPFPGPASG*VHILEY Trigger: GTATTCTAAAATATGTACCAATCCAGATGCTGGCCC...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTGCTTTCAGGTTTAGTTaGTTTCAGCATATTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QSPFLSLQSAGITGIGHRAFRFS*FQHIGF Trigger: GAAGCCAATATGCTGAAACAAACTAAACCTGAAAGC...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTCTGCAGTTTTCGGTTTaGTTTTCAGACGGTAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: RFCYVALASLKVTAVPFPLQFSV*FSDGKL Trigger: GAGTTTACCGTCTGAAAACAAAACCGAAAACTGCAG...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGTCAGCGAGACAGTTATaGATCTTCTTGAGGATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VDRARLEVMRSCGLPLSVSARQL*IFLRIV Trigger: CACTATCCTCAAGAAGATCAATAACTGTCTCGCTGA...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | AGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGCAGTCCCCTTTCCTCATGCATTTGATATGTaGAAGAGGCACTGTTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RFCYVALASLKVTAVPFPHAFDM*KRHCLS Trigger: ACTCAAACAGTGCCTCTTCAACATATCAAATGCATG...AGGAAAGGGGACTGCTGTGACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACCAATGTGCTGGCACTTaGACTAGAAATCTGTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AGITGIGHRVMVNPLPTDQCAGT*TRNLCD Trigger: GTCACACAGATTTCTAGTCAAAGTGCCAGCACATTG...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAACAATGTGCTGGCACTTaGACTAGAAATCTGTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RTARATQRHPVSKNQKPKQCAGT*TRNLCD Trigger: GTCACACAGATTTCTAGTCAAAGTGCCAGCACATTG...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACTTGACTGTGCAACTCTaGGTGATATCCATATCACCC | + |
|
Preference number: 5 (lower is better) Translates to: AGITGIGHRVMVNPLPTDLTVQL*VISISP Trigger: GGGTGATATGGATATCACCAAGAGTTGCACAGTCAA...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTGGAAATGTAATACTCTaGTTTTTGAGGCTAAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QSPFLSLQSAGITGIGHRGNVIL*FLRLRL Trigger: AAGCCTTAGCCTCAAAAACAAGAGTATTACATTTCC...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACGGACTCAAATTCAGTTaGGCTGCAACAGATCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: AGITGIGHRVMVNPLPTDGLKFS*AATDPM Trigger: CATTGGATCTGTTGCAGCCAAACTGAATTTGAGTCC...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGGCTGAATGCACCAATTaGTTATACAGAGCCACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VDRARLEVMRSCGLPLSVAECTN*LYRATF Trigger: AAAAGTGGCTCTGTATAACAAATTGGTGCATTCAGC...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACAAGACAGCTTACCTCTaGATCTTGTGCACTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: AGITGIGHRVMVNPLPTDKTAYL*ILCTVM Trigger: CATGACAGTGCACAAGATCAAGAGGTAAGCTGTCTT...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | CAGTCCCCTTTCCTTAGCCTTCAGAGTGCTGGGATTACAGGTATAGGCCATCGTATTCAAGAACATTTTTaGGCTCAAGACAGCTTACCT | + |
|
Preference number: 5 (lower is better) Translates to: QSPFLSLQSAGITGIGHRIQEHF*AQDSLP Trigger: AGGTAAGCTGTCTTGAGCCAAAAAATGTTCTTGAAT...ACGATGGCCTATACCTGTAATCCCAGCACTCTGAAGGCTAAGGAAAGGGGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS CCA 90 bp | AAACTCTCTTCAGAGATAGTGTCACCAAGAAACTGTGATTCCATTTaGCTATTACGCTGTGTGCTGACATCCAGAGAGAGTCCATCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KLSSEIVSPRNCDSI*LLRCVLTSRESPSD Trigger: GTCTGATGGACTCTCTCTGGATGTCAGCACACAGCGTAATAGCCAAATGGAATCACAGTTTCTTGGTGACACTATCTCTGAAGAGAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028802.3 ENSMUST00000099542.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACAGGTTCCTGGTTTGTTaGATTTCCACATTTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AGITGIGHRVMVNPLPTDRFLVC*ISTFEV Trigger: GACCTCAAATGTGGAAATCAAACAAACCAGGAACCT...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATTCATTACAGTGTGACTaGCTGTCAGATCCATCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EIMWSPSFSDLSICSHRYSLQCD*LSDPSG Trigger: ACCAGATGGATCTGACAGCAAGTCACACTGTAATGA...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACACAGGCTGTATGACATaGGGTCAAATTCATACCATC | + |
|
Preference number: 5 (lower is better) Translates to: AGITGIGHRVMVNPLPTDTGCMT*GQIHTI Trigger: GATGGTATGAATTTGACCCAATGTCATACAGCCTGT...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAAAAAACAGTATGGGACTaGGTCATGTCTAGTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTARATQRHPVSKNQKPKKTVWD*VMSSSS Trigger: TGAGGAACTAGACATGACCAAGTCCCATACTGTTTT...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 44% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACGTTTGTTTCAGCATATaGGCTTCCACTTCCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AGITGIGHRVMVNPLPTDVCFSI*ASTSFP Trigger: AGGAAAGGAAGTGGAAGCCAATATGCTGAAACAAAC...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAACTGCAGTTTTCGGTTTaGTTTTCAGACGGTAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: RTARATQRHPVSKNQKPKLQFSV*FSDGKL Trigger: GAGTTTACCGTCTGAAAACAAAACCGAAAACTGCAG...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGAAAAATCTCTTGATCTaGTGCACTGTCATGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VDRARLEVMRSCGLPLSVKNLLI*CTVMCS Trigger: AGAACACATGACAGTGCACAAGATCAAGAGATTTTT...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | GTTGACCGTGCTCGTCTTGAAGTCATGAGATCATGTGGTCTCCCTCTTTCAGTGCTCCTTTATTGTAATTaGTCCATCCTTGAGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VDRARLEVMRSCGLPLSVLLYCN*SILEFL Trigger: GAGAAACTCAAGGATGGACAAATTACAATAAAGGAG...CACTGAAAGAGGGAGACCACATGATCTCATGACTTCAAGACGAGCACGGTCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS TCA 90 bp | CAAGTCTGTCTGGAAGTACACCTTTTGCCTCTGCTTGGTAGTCAATaGAAACAGTATGGGACTTGGTCATGTCTAGTTCCTCATGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: QVCLEVHLLPLLGSQ*KQYGTWSCLVPHDH Trigger: ATGATCATGAGGAACTAGACATGACCAAGTCCCATACTGTTTTCATTGACTACCAAGCAGAGGCAAAAGGTGTACTTCCAGACAGACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACAAACAGATAAAGTGTTaGTCTGACTCCGTTGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGITGIGHRVMVNPLPTDKQIKC*SDSVVS Trigger: GCTTACAACGGAGTCAGACAAACACTTTATCTGTTT...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS TCA 90 bp | CAGTGTGACTTGCTGTCAGATCCATCTGGTTTTCATCTGAAAAGATaGCTGTCTGATCATTTGCATGTTTCCTTTCATGGTTGCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QCDLLSDPSGFHLKR*LSDHLHVSFHGCSL Trigger: CAGACTGCAACCATGAAAGGAAACATGCAAATGATCAGACAGTCATCTTTTCAGATGAAAACCAGATGGATCTGACAGCAAGTCACACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 ENSMUST00000152380.8 |
||
| CDS TCA 90 bp | TCTACCGGATCTTCATCTTTAAGCAGCGCTATGGCACTTTCAGTTTaGGTGACTTCTTTTGAAGGACAAGGTGGAAAGACAGACAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: STGSSSLSSAMALSV*VTSFEGQGGKTDSF Trigger: AAAACTGTCTGTCTTTCCACCTTGTCCTTCAAAAGAAGTCACTCAAACTGAAAGTGCCATAGCGCTGCTTAAAGATGAAGATCCGGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
||
| CDS CCA 90 bp | CTCACCAGGATATACAGGGAGATTTTCCTCATTTATAAACTGAGATaGACTCAAATTCAGTTTGGCTGCAACAGATCCAATGCCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LTRIYREIFLIYKLR*TQIQFGCNRSNAWI Trigger: GATCCAGGCATTGGATCTGTTGCAGCCAAACTGAATTTGAGTCCATCTCAGTTTATAAATGAGGAAAATCTCCCTGTATATCCTGGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
||
| CDS-3UTR CAA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCCCTGAAGAGGACTCCTaGGGGGTTTCAAAATTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NYCFEIRFCYVALASLKVPEEDS*GVSKLR Trigger: CCTCAATTTTGAAACCCCCAAGGAGTCCTCTTCAGG...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATTTGAAGAGGCACTGTTaGAGTCTTTGGAATAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: EIMWSPSFSDLSICSHRYLKRHC*SLWNKQ Trigger: CTGTTTATTCCAAAGACTCAAACAGTGCCTCTTCAA...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATAAACAGATAAAGTGTTaGTCTGACTCCGTTGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: EIMWSPSFSDLSICSHRYKQIKC*SDSVVS Trigger: GCTTACAACGGAGTCAGACAAACACTTTATCTGTTT...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATACAATAGTGTGGCTCTaGGTTAGATCCATAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: EIMWSPSFSDLSICSHRYTIVWL*VRSIVC Trigger: ACAAACTATGGATCTAACCAAGAGCCACACTATTGT...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | AGGACAGCCAGGGCTACACAGAGACATCCTGTCTCGAAAAACCAAAAACCAAAAGGAAATGTAATACTCTaGTTTTTGAGGCTAAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RTARATQRHPVSKNQKPKGNVIL*FLRLRL Trigger: AAGCCTTAGCCTCAAAAACAAGAGTATTACATTTCC...TTTTGGTTTTTGGTTTTTCGAGACAGGATGTCTCTGTGTAGCCCTGGCTGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCCCTGCCCTTTTTGAGTaGATGGACTTTGTTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NYCFEIRFCYVALASLKVPALFE*MDFVGL Trigger: CAGCCCAACAAAGTCCATCAACTCAAAAAGGGCAGG...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTACAGGTATAGGCCATCGTGTCATGGTAAATCCTTTACCAACTGACCTCTTGCTTGGTAATTaGGGTAAAAATATCCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: AGITGIGHRVMVNPLPTDLLLGN*GKNIPN Trigger: ATTGGGGATATTTTTACCCAAATTACCAAGCAAGAG...GTCAGTTGGTAAAGGATTTACCATGACACGATGGCCTATACCTGTAATCCCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAGAGAGTCCATCAGACTaGATTGAATCCAGAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQESPSD*IESREL Trigger: CAGCTCTCTGGATTCAATCAAGTCTGATGGACTCTC...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | GAGATCATGTGGTCTCCCTCTTTCAGTGATCTGAGTATCTGCAGCCATAGATATAAGTTATCTCAAACTTaGCAAATGCTGCACAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: EIMWSPSFSDLSICSHRYKLSQT*QMLHNW Trigger: CCAGTTGTGCAGCATTTGCAAAGTTTGAGATAACTT...ATATCTATGGCTGCAGATACTCAGATCACTGAAAGAGGGAGACCACATGATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS TCA 90 bp | AGTCAGCTGCATCTGCTAGAATCTGTTCCAGGTCATCAACACCAGTaGTACTACAACTTCTCTTGCTTGGTAATTTGGGTAAAAATATCC | + |
|
Preference number: 5 (lower is better) Translates to: SQLHLLESVPGHQHQ*YYNFSCLVIWVKIS Trigger: GGATATTTTTACCCAAATTACCAAGCAAGAGAAGTTGTAGTATCACTGGTGTTGATGACCTGGAACAGATTCTAGCAGATGCAGCTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
||
| CDS-3UTR CAA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAGCATCTGAGTCTGAATaGGAGCACAAAGCAAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQASESE*EHKAKC Trigger: ACACTTTGCTTTGTGCTCCAATTCAGACTCAGATGC...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAATTGACTGTGCAACTCTaGGTGATATCCATATCACCC | + |
|
Preference number: 5 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQLTVQL*VISISP Trigger: GGGTGATATGGATATCACCAAGAGTTGCACAGTCAA...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAGTGTTTATAGTAAATTaGGCTGGGAGAGTGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQVFIVN*AGRVLC Trigger: GCAGAGCACTCTCCCAGCCAAATTTACTATAAACAC...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS TCA 90 bp | AGTATCTCACCAGGATATACAGGGAGATTTTCCTCATTTATAAACTaGGATGGACTCAAATTCAGTTTGGCTGCAACAGATCCAATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SISPGYTGRFSSFIN*DGLKFSLAATDPMP Trigger: AGGCATTGGATCTGTTGCAGCCAAACTGAATTTGAGTCCATCTCAGTTTATAAATGAGGAAAATCTCCCTGTATATCCTGGTGAGATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
||
| CDS CCA 90 bp | AATTGTTTTATCACCTTTGAATTCTCCTATTTTGGCCTCCGTGGATaGAGGAATCCAAGTCTTAATACAGGCTGTATGACATTGGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: NCFITFEFSYFGLRG*RNPSLNTGCMTLGQ Trigger: TTGACCCAATGTCATACAGCCTGTATTAAGACTTGGATTCCTCCATCCACGGAGGCCAAAATAGGAGAATTCAAAGGTGATAAAACAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 ENSMUST00000152380.8 |
||
| CDS-3UTR CAA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTTTGAATTCTCCTATTTaGGCCTCCGTGGATGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: DNSKQITCYLRPHHFQLGLNSPI*ASVDGG Trigger: TCCTCCATCCACGGAGGCCAAAATAGGAGAATTCAA...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAGGGCCAGCATCTGGATaGGTACATATTTTAGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQGPASG*VHILEY Trigger: GTATTCTAAAATATGTACCAATCCAGATGCTGGCCC...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS TCA 90 bp | TGTATTCCCAAGTTAGTATATTCATCAAGTACCTTTTCTTTGGCTTaGCAATCGATGAAAACCGTATGGGATCTGGTGACATCCAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: CIPKLVYSSSTFSLA*QSMKTVWDLVTSRS Trigger: TGATCTGGATGTCACCAGATCCCATACGGTTTTCATCGATTGTCAAGCCAAAGAAAAGGTACTTGATGAATATACTAACTTGGGAATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
||
| CDS-3UTR CAA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAACAGGTCTCTGTGTATaGTCATTCTCTTCATTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQTGLCV*SFSSLA Trigger: AGCTAATGAAGAGAATGACAATACACAGAGACCTGT...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCCAGAAATCCAGGCTTTaGTGCATCATTAGTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NYCFEIRFCYVALASLKVQKSRL*CIISFL Trigger: GAGGAAACTAATGATGCACAAAAGCCTGGATTTCTG...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAGCTTTCAGGTTTAGTTaGTTTCAGCATATTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQAFRFS*FQHIGF Trigger: GAAGCCAATATGCTGAAACAAACTAAACCTGAAAGC...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS-3UTR CAA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAGTAATTTGTCCATCCTaGAGTTTCTCCTTCAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQVICPS*SFSFKL Trigger: GAGTTTGAAGGAGAAACTCAAGGATGGACAAATTAC...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
||
| CDS TCA 90 bp | AATCATTACAGTGTGACTTGCTGTCAGATCCATCTGGTTTTCATCTaGAAAGATGACTGTCTGATCATTTGCATGTTTCCTTTCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: NHYSVTCCQIHLVFI*KDDCLIICMFPFMV Trigger: AACCATGAAAGGAAACATGCAAATGATCAGACAGTCATCTTTTCAGATGAAAACCAGATGGATCTGACAGCAAGTCACACTGTAATGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 ENSMUST00000152380.8 |
||
| CDS TCA 90 bp | ACTTGTTTATCCAGGCTTTCCCACTCATTTAAAGGGCTTTTGCTGTaGGAGTATGATTTGGTGACATTCTTTGATGCTAAGTCAAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TCLSRLSHSFKGLLL*EYDLVTFFDAKSKV Trigger: AACTTTTGACTTAGCATCAAAGAATGTCACCAAATCATACTCTCACAGCAAAAGCCCTTTAAATGAGTGGGAAAGCCTGGATAAACAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
||
| CDS-3UTR CAA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAGGTCTCTGTGTATaGTCATTCTCTTCATTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NYCFEIRFCYVALASLKVTGLCV*SFSSLA Trigger: AGCTAATGAAGAGAATGACAATACACAGAGACCTGT...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
||
| CDS-3UTR CAA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCTTGAAGAGGCACTGTTaGAGTCTTTGGAATAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: NYCFEIRFCYVALASLKVLKRHC*SLWNKQ Trigger: CTGTTTATTCCAAAGACTCAAACAGTGCCTCTTCAA...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR CAA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTACAGGCTGTATGACATaGGGTCAAATTCATACCATC | + |
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Preference number: 5 (lower is better) Translates to: DNSKQITCYLRPHHFQLGTGCMT*GQIHTI Trigger: GATGGTATGAATTTGACCCAATGTCATACAGCCTGT...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS-3UTR CAA 90 bp | AATTATTGTTTTGAGATAAGATTCTGTTACGTAGCCTTGGCTAGCCTCAAAGTCACAATAGTGTGGCTCTaGGTTAGATCCATAGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: NYCFEIRFCYVALASLKVTIVWL*VRSIVC Trigger: ACAAACTATGGATCTAACCAAGAGCCACACTATTGT...GACTTTGAGGCTAGCCAAGGCTACGTAACAGAATCTTATCTCAAAACAATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028799.12 |
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| CDS-3UTR CAA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTACCTTTTGCCTCTGCTaGGTAGTCAATGAAAACAGT | + |
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Preference number: 5 (lower is better) Translates to: DNSKQITCYLRPHHFQLGTFCLC*VVNENS Trigger: ACTGTTTTCATTGACTACCAAGCAGAGGCAAAAGGT...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS-3UTR CAA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTCAGAAATCCAGGCTTTaGTGCATCATTAGTTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: DNSKQITCYLRPHHFQLGQKSRL*CIISFL Trigger: GAGGAAACTAATGATGCACAAAAGCCTGGATTTCTG...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS-3UTR CAA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTGTTTGTTTCAGCATATaGGCTTCCACTTCCTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: DNSKQITCYLRPHHFQLGVCFSI*ASTSFP Trigger: AGGAAAGGAAGTGGAAGCCAATATGCTGAAACAAAC...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS-3UTR CAA 90 bp | GTGTACCACCACCACCTGGCAGAATTTTGCTACTTTTATATGATGTTAAGACAAAAAGGTAAATACAGCTaGATCATCACTCCACTCAAT | + |
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Preference number: 5 (lower is better) Translates to: VYHHHLAEFCYFYMMLRQKGKYS*IITPLN Trigger: ATTGAGTGGAGTGATGATCAAGCTGTATTTACCTTT...TTGTCTTAACATCATATAAAAGTAGCAAAATTCTGCCAGGTGGTGGTGGTACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS TCA 90 bp | GCTGATAGACACTTAGTCAGTTCCATTGCATCATTGCTACTAGAATaGAAAATTGTCTTATACCCCTCAATAGCTGGACTAGAACATATA | + |
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Preference number: 5 (lower is better) Translates to: ADRHLVSSIASLLLE*KIVLYPSIAGLEHI Trigger: TATATGTTCTAGTCCAGCTATTGAGGGGTATAAGACAATTTTTCATTCTAGTAGCAATGATGCAATGGAACTGACTAAGTGTCTATCAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 ENSMUST00000152380.8 |
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| CDS-3UTR CAA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTCATGCATTTGATATGTaGAAGAGGCACTGTTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: DNSKQITCYLRPHHFQLGHAFDM*KRHCLS Trigger: ACTCAAACAGTGCCTCTTCAACATATCAAATGCATG...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS-3UTR CAA 90 bp | GATAATAGCAAGCAGATAACATGCTATTTGAGACCTCATCATTTTCAACTAGGTCTCTTGCTTGGTAATTaGGGTAAAAATATCCCCAAT | + |
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Preference number: 5 (lower is better) Translates to: DNSKQITCYLRPHHFQLGLLLGN*GKNIPN Trigger: ATTGGGGATATTTTTACCCAAATTACCAAGCAAGAG...ACCTAGTTGAAAATGATGAGGTCTCAAATAGCATGTTATCTGCTTGCTATTATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028802.3 |
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| CDS CAA 90 bp | TGGCTATTACGCTGTGTGCTGACATCCAGAGAGAGTCCATCAGACTaGATTGAATCCAGAGAGCTGCTGCAACTAGACGGTGTCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: WLLRCVLTSRESPSD*IESRELLQLDGVLL Trigger: GAGCAGGACACCGTCTAGTTGCAGCAGCTCTCTGGATTCAATCAAGTCTGATGGACTCTCTCTGGATGTCAGCACACAGCGTAATAGCCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS CAA 72 bp | TCCATGTCCTCGGGCCCATATGCAGACAAAACTGGTTaGGAAGTTCCTGCCAATGGCACAAAACTGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SMSSGPYADKTG*EVPANGTKLKP Trigger: GGGCTTCAGTTTTGTGCCATTGGCAGGAACTTCCAAACCAGTTTTGTCTGCATATGGGCCCGAGGACATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS CAA 72 bp | CGCTGTGTGCTGACATCCAGAGAGAGTCCATCAGACTaGATTGAATCCAGAGAGCTGCTGCAACTAGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: RCVLTSRESPSD*IESRELLQLDG Trigger: ACCGTCTAGTTGCAGCAGCTCTCTGGATTCAATCAAGTCTGATGGACTCTCTCTGGATGTCAGCACACAGCG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS TCA 72 bp | TGTGCTGACATCCAGAGAGAGTCCATCAGACTTGATTaGATCCAGAGAGCTGCTGCAACTAGACGGTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: CADIQRESIRLD*IQRAAATRRCP Trigger: AGGACACCGTCTAGTTGCAGCAGCTCTCTGGATTCAATCAAGTCTGATGGACTCTCTCTGGATGTCAGCACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS CAA 72 bp | CTTCATCTCTACGGGCAACATCCTGCCCTTTTTGAGTaGATGGACTTTGTTGGGCTGAGAGATGAGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LHLYGQHPALFE*MDFVGLRDEAE Trigger: CTCAGCCTCATCTCTCAGCCCAACAAAGTCCATCAACTCAAAAAGGGCAGGATGTTGCCCGTAGAGATGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS CAA 90 bp | CTAATATTCCTTCATCTCTACGGGCAACATCCTGCCCTTTTTGAGTaGATGGACTTTGTTGGGCTGAGAGATGAGGCTGAGAAGCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: LIFLHLYGQHPALFE*MDFVGLRDEAEKQH Trigger: GTGTTGCTTCTCAGCCTCATCTCTCAGCCCAACAAAGTCCATCAACTCAAAAAGGGCAGGATGTTGCCCGTAGAGATGAAGGAATATTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS CCA 72 bp | AGCCCGCTATTAGACCCTTCCTCTAATATTGTTAGCTaGCTGCCTTTTGCTGGTAGATGGTTGCTTTCACTA | + |
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Preference number: 6 (lower is better) Translates to: SPLLDPSSNIVS*LPFAGRWLLSL Trigger: TAGTGAAAGCAACCATCTACCAGCAAAAGGCAGCCAGCTAACAATATTAGAGGAAGGGTCTAATAGCGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS CCA 72 bp | ATATGCAGACAAAACTGGTTTGGAAGTTCCTGCCAATaGCACAAAACTGAAGCCCTTTCTGTCTTCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: ICRQNWFGSSCQ*HKTEALSVFQP Trigger: AGGCTGGAAGACAGAAAGGGCTTCAGTTTTGTGCCATTGGCAGGAACTTCCAAACCAGTTTTGTCTGCATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS TCA 72 bp | TGTTTGATCCTTTGCCAGGTTAAGAGATACATGCTTTaGGTTAAATGTAGCCATCTCCCCCAGAGGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: CLILCQVKRYML*VKCSHLPQRLF Trigger: GAAGAGCCTCTGGGGGAGATGGCTACATTTAACTCAAAGCATGTATCTCTTAACCTGGCAAAGGATCAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS CCA 72 bp | TCAGAGATAGTGTCACCAAGAAACTGTGATTCCATTTaGCTATTACGCTGTGTGCTGACATCCAGAGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: SEIVSPRNCDSI*LLRCVLTSRES Trigger: ACTCTCTCTGGATGTCAGCACACAGCGTAATAGCCAAATGGAATCACAGTTTCTTGGTGACACTATCTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS CAA 90 bp | GGACCAAGGGATAATGGGCCGAGGGAGACAAAGTTATCTCAAACTTaGCAAATGCTGCACAACTGGAGAATAAAAGCCTCAATTCAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: GPRDNGPRETKLSQT*QMLHNWRIKASIQY Trigger: ATACTGAATTGAGGCTTTTATTCTCCAGTTGTGCAGCATTTGCAAAGTTTGAGATAACTTTGTCTCCCTCGGCCCATTATCCCTTGGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS TCA 72 bp | CAAACTCTCTTCAGAGATAGTGTCACCAAGAAACTGTaGTTCCATTTGGCTATTACGCTGTGTGCTGACATC | + |
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Preference number: 6 (lower is better) Translates to: QTLFRDSVTKKL*FHLAITLCADI Trigger: GATGTCAGCACACAGCGTAATAGCCAAATGGAATCACAGTTTCTTGGTGACACTATCTCTGAAGAGAGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS GCA 72 bp | TCTCTATCTTTCCTCTGTGGTAAAGGAAGTTTAGAATaGTGGCCTAGCACTACTTGTTTATCCAGGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SLSFLCGKGSLE*WPSTTCLSRLS Trigger: GGAAAGCCTGGATAAACAAGTAGTGCTAGGCCAGCATTCTAAACTTCCTTTACCACAGAGGAAAGATAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS CCA 72 bp | ATCACCTTTGAATTCTCCTATTTTGGCCTCCGTGGATaGAGGAATCCAAGTCTTAATACAGGCTGTATGACA | + |
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Preference number: 6 (lower is better) Translates to: ITFEFSYFGLRG*RNPSLNTGCMT Trigger: TGTCATACAGCCTGTATTAAGACTTGGATTCCTCCATCCACGGAGGCCAAAATAGGAGAATTCAAAGGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 ENSMUST00000152380.8 |
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| CDS CAA 72 bp | GATAATGGGCCGAGGGAGACAAAGTTATCTCAAACTTaGCAAATGCTGCACAACTGGAGAATAAAAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: DNGPRETKLSQT*QMLHNWRIKAS Trigger: TGAGGCTTTTATTCTCCAGTTGTGCAGCATTTGCAAAGTTTGAGATAACTTTGTCTCCCTCGGCCCATTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS TCA 72 bp | TCCAGGCTTTCCCACTCATTTAAAGGGCTTTTGCTGTaGGAGTATGATTTGGTGACATTCTTTGATGCTAAG | + |
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Preference number: 6 (lower is better) Translates to: SRLSHSFKGLLL*EYDLVTFFDAK Trigger: CTTAGCATCAAAGAATGTCACCAAATCATACTCTCACAGCAAAAGCCCTTTAAATGAGTGGGAAAGCCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS CCA 72 bp | GAGATGTCACTTTCGGCTTCTGTAGGCTTTCCTTTTTaGATAATTGAAAGTCAAGTCTGTCTGGAAGTACAC | + |
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Preference number: 6 (lower is better) Translates to: EMSLSASVGFPF*IIESQVCLEVH Trigger: GTGTACTTCCAGACAGACTTGACTTTCAATTATCCAAAAAGGAAAGCCTACAGAAGCCGAAAGTGACATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS CAA 90 bp | CTGTATTCCCAAGTTAGTATATTCATCAAGTACCTTTTCTTTGGCTaGACAATCGATGAAAACCGTATGGGATCTGGTGACATCCAGATC | + |
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Preference number: 6 (lower is better) Translates to: LYSQVSIFIKYLFFG*TIDENRMGSGDIQI Trigger: GATCTGGATGTCACCAGATCCCATACGGTTTTCATCGATTGTCAAGCCAAAGAAAAGGTACTTGATGAATATACTAACTTGGGAATACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS TCA 72 bp | AGTGTGACTTGCTGTCAGATCCATCTGGTTTTCATCTaGAAAGATGACTGTCTGATCATTTGCATGTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SVTCCQIHLVFI*KDDCLIICMFP Trigger: AGGAAACATGCAAATGATCAGACAGTCATCTTTTCAGATGAAAACCAGATGGATCTGACAGCAAGTCACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 ENSMUST00000152380.8 |
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| CDS TCA 72 bp | GTACAGTCTGAAAGACCTTTGGTAATCATTACAGTGTaGCTTGCTGTCAGATCCATCTGGTTTTCATCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VQSERPLVIITV*LAVRSIWFSSE Trigger: TTCAGATGAAAACCAGATGGATCTGACAGCAAGTCACACTGTAATGATTACCAAAGGTCTTTCAGACTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 ENSMUST00000152380.8 |
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| CDS TCA 72 bp | GTGGATGGAGGAATCCAAGTCTTAATACAGGCTGTATaGCATTGGGTCAAATTCATACCATCATCTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: VDGGIQVLIQAV*HWVKFIPSSCS Trigger: AGAACAAGATGATGGTATGAATTTGACCCAATGTCATACAGCCTGTATTAAGACTTGGATTCCTCCATCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 ENSMUST00000152380.8 |
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| CDS GCA 72 bp | GTGACTTCTATTGATTTCCATTTCAACCTGACCACGTaGATGCAAAATGGTTTTAGAAGTTCCTGCCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VTSIDFHFNLTT*MQNGFRSSCQR Trigger: TCTTTGGCAGGAACTTCTAAAACCATTTTGCATGCACGTGGTCAGGTTGAAATGGAAATCAATAGAAGTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS CAA 72 bp | TCAGAAGGACCAAAGCCAATTACAATAGTGTGGCTCTaGGTTAGATCCATAGTTTGTAACTCCTCTGAATAC | + |
|
Preference number: 6 (lower is better) Translates to: SEGPKPITIVWL*VRSIVCNSSEY Trigger: GTATTCAGAGGAGTTACAAACTATGGATCTAACCAAGAGCCACACTATTGTAATTGGCTTTGGTCCTTCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS TCA 72 bp | CCAGGATATACAGGGAGATTTTCCTCATTTATAAACTaGGATGGACTCAAATTCAGTTTGGCTGCAACAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PGYTGRFSSFIN*DGLKFSLAATD Trigger: ATCTGTTGCAGCCAAACTGAATTTGAGTCCATCTCAGTTTATAAATGAGGAAAATCTCCCTGTATATCCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS CAA 72 bp | CAAGTTAGTATATTCATCAAGTACCTTTTCTTTGGCTaGACAATCGATGAAAACCGTATGGGATCTGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: QVSIFIKYLFFG*TIDENRMGSGD Trigger: GTCACCAGATCCCATACGGTTTTCATCGATTGTCAAGCCAAAGAAAAGGTACTTGATGAATATACTAACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS CAA 72 bp | TCCAGGTCATCAACACCAGTGATACTACAACTTCTCTaGCTTGGTAATTTGGGTAAAAATATCCCCAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: SRSSTPVILQLL*LGNLGKNIPNE Trigger: TTCATTGGGGATATTTTTACCCAAATTACCAAGCAAGAGAAGTTGTAGTATCACTGGTGTTGATGACCTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS CAA 90 bp | AGAATCTGTTCCAGGTCATCAACACCAGTGATACTACAACTTCTCTaGCTTGGTAATTTGGGTAAAAATATCCCCAATGAACATCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RICSRSSTPVILQLL*LGNLGKNIPNEHLL Trigger: AAGAAGATGTTCATTGGGGATATTTTTACCCAAATTACCAAGCAAGAGAAGTTGTAGTATCACTGGTGTTGATGACCTGGAACAGATTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS TCA 72 bp | CACTTAGTCAGTTCCATTGCATCATTGCTACTAGAATaGAAAATTGTCTTATACCCCTCAATAGCTGGACTA | + |
|
Preference number: 6 (lower is better) Translates to: HLVSSIASLLLE*KIVLYPSIAGL Trigger: TAGTCCAGCTATTGAGGGGTATAAGACAATTTTTCATTCTAGTAGCAATGATGCAATGGAACTGACTAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 ENSMUST00000152380.8 |
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| CDS CAA 72 bp | TGGAGGAATCCAAGTCTTAATACAGGCTGTATGACATaGGGTCAAATTCATACCATCATCTTGTTCTCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: WRNPSLNTGCMT*GQIHTIILFSK Trigger: TTTAGAGAACAAGATGATGGTATGAATTTGACCCAATGTCATACAGCCTGTATTAAGACTTGGATTCCTCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 ENSMUST00000152380.8 |
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| CDS CAA 72 bp | CAGTATTATTCACATTTATATGCATTAGGCTATAATTaGGCCCCCATCGCTTTAAAAATTCGATCTCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: QYYSHLYALGYN*APIALKIRSPL Trigger: GAGAGGAGATCGAATTTTTAAAGCGATGGGGGCCAAATTATAGCCTAATGCATATAAATGTGAATAATACTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028802.3 ENSMUST00000099542.9 |
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| CDS TCA 72 bp | CATGCTAAATCCTTTTTAATTCTTGAATTTGCAGCATaGTGCTTTAAATTCTCCAGAAAGGACGTGGTATCT | + |
|
Preference number: 6 (lower is better) Translates to: HAKSFLILEFAA*CFKFSRKDVVS Trigger: AGATACCACGTCCTTTCTGGAGAATTTAAAGCATCATGCTGCAAATTCAAGAATTAAAAAGGATTTAGCATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028799.12 ENSMUST00000028802.3 ENSMUST00000099542.9 ENSMUST00000152380.8 |
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