Pregenerated sensors for KNG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022875Ensembl transcript IDs: ENSMUST00000023589.15, ENSMUST00000039492.14, ENSMUST00000089902.8, ENSMUST00000125790.8
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAAGCTTTAGAGACAGCTCCAATTCGCCTCATGTCAGGGATGGCTaGAAGGAGACCACTGTAAAATCATCAAGTCTGAATTTTATTTCC | + |
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Preference number: 1 (lower is better) Translates to: SSFRDSSNSPHVRDG*KETTVKSSSLNFIS Trigger: GGAAATAAAATTCAGACTTGATGATTTTACAGTGGTCTCCTTTCAGCCATCCCTGACATGAGGCGAATTGGAGCTGTCTCTAAAGCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGTGAGACCCTCTAATCATCCCTGTGGCACCCGTGCCTCTGTGGCAAGGGCCTCATGTCAGGGATaGCTGAAAGGAGACCACTGT | + |
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Preference number: 2 (lower is better) Translates to: TEVRPSNHPCGTRASVARASCQG*LKGDHC Trigger: ACAGTGGTCTCCTTTCAGCCATCCCTGACATGAGGC...CCTTGCCACAGAGGCACGGGTGCCACAGGGATGATTAGAGGGTCTCACTTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| 3UTR CAA 90 bp | CCGCTCCTTACCAGAGCAGTGGATTCTGGTAGGCTTCTTCCTGTATaGGTTCAGAAAGTGTGTGAGGCAGGCTCAGAGGGATTCAGAATG | + |
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Preference number: 2 (lower is better) Translates to: PLLTRAVDSGRLLPV*VQKVCEAGSEGFRM Trigger: CATTCTGAATCCCTCTGAGCCTGCCTCACACACTTTCTGAACCAATACAGGAAGAAGCCTACCAGAATCCACTGCTCTGGTAAGGAGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAGCTATCCGCTCCTTACCAGAGCAGTGGATTCTGGTAGGCTTCTTCCTGTAATTGACAGGCTGTTCTaGTCACCATGGCTGGATGAC | + |
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Preference number: 2 (lower is better) Translates to: LSYPLLTRAVDSGRLLPVIDRLF*SPWLDD Trigger: GTCATCCAGCCATGGTGATCAGAACAGCCTGTCAAT...TACAGGAAGAAGCCTACCAGAATCCACTGCTCTGGTAAGGAGCGGATAGCTCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAAAGAGCAAGTTCTCACAGAAGTGAGACCCTCTAATCATCCCTGTGGCACCATCCCAGGATTCTTCTaGTCCTTCCCTCTGGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: QKEQVLTEVRPSNHPCGTIPGFF*SFPLGH Trigger: ATGACCCAGAGGGAAGGACCAGAAGAATCCTGGGAT...GGTGCCACAGGGATGATTAGAGGGTCTCACTTCTGTGAGAACTTGCTCTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| 3UTR-3UTR TCA 90 bp | CAAAAAGAGCAAGTTCTCACAGAAGTGAGACCCTCTAATCATCCCTGTGGCACCCATGTCAGGGATGGCTaGAAGGAGACCACTGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: QKEQVLTEVRPSNHPCGTHVRDG*KETTVK Trigger: TTTTACAGTGGTCTCCTTTCAGCCATCCCTGACATG...GGTGCCACAGGGATGATTAGAGGGTCTCACTTCTGTGAGAACTTGCTCTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| 3UTR-3UTR TCA 90 bp | GCTATCCGCTCCTTACCAGAGCAGTGGATTCTGGTAGGCTTCTTCCTGTATTGGCAGAGGGATTCAGAATaGTGGCAGCTTTATTATCGA | + |
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Preference number: 2 (lower is better) Translates to: AIRSLPEQWILVGFFLYWQRDSE*WQLYYR Trigger: TCGATAATAAAGCTGCCATCATTCTGAATCCCTCTG...CCAATACAGGAAGAAGCCTACCAGAATCCACTGCTCTGGTAAGGAGCGGATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTCAGAAAGTGTGTGAGGCAGGCTCAGAGGGATTCAGAATGATGGCAGCTAGTAGAAAGAAAGGCTaGGAGAGCATTTGTGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LVQKVCEAGSEGFRMMAASRKKG*ESICEA Trigger: AGCTTCACAAATGCTCTCCCAGCCTTTCTTTCTACT...AGCTGCCATCATTCTGAATCCCTCTGAGCCTGCCTCACACACTTTCTGAACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTTCATGATTTTAATGAAGTGCCCAGGTCACTGGGCACTTTCTGATAAGATGGACTATAAGCGTCTGTaGCCAAACTCAAGCTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: LFMILMKCPGHWALSDKMDYKRL*PNSSFR Trigger: TCTAAAGCTTGAGTTTGGCCACAGACGCTTATAGTC...CATCTTATCAGAAAGTGCCCAGTGACCTGGGCACTTCATTAAAATCATGAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| 3UTR CCA 72 bp | CCAGAGCAGTGGATTCTGGTAGGCTTCTTCCTGTATTaGTTCAGAAAGTGTGTGAGGCAGGCTCAGAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: PEQWILVGFFLY*FRKCVRQAQRD Trigger: ATCCCTCTGAGCCTGCCTCACACACTTTCTGAACCAATACAGGAAGAAGCCTACCAGAATCCACTGCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| 3UTR TCA 72 bp | AGAAAGTGTGTGAGGCAGGCTCAGAGGGATTCAGAATaGTGGCAGCTTTATTATCGATCAGTCCACAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: RKCVRQAQRDSE*WQLYYRSVHRE Trigger: CTCCCTGTGGACTGATCGATAATAAAGCTGCCATCATTCTGAATCCCTCTGAGCCTGCCTCACACACTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| 3UTR CCA 72 bp | CCATGGCTGGATGACTTAGGTCACAATGTTTGTGCTTaGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PWLDDLGHNVCA*AVERKAGRAFV Trigger: CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTCATCCAGCCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| 3UTR CCA 72 bp | AGAGAGGATGTTCCAGAGAGAGACTATAAGCGTCTGTaGCCAAACTCAAGCTTTAGAGACAGCTCCAATTCG | + |
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Preference number: 3 (lower is better) Translates to: REDVPERDYKRL*PNSSFRDSSNS Trigger: CGAATTGGAGCTGTCTCTAAAGCTTGAGTTTGGCCACAGACGCTTATAGTCTCTCTCTGGAACATCCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| 3UTR CCA 72 bp | CTCTTGTTCATGATTTTAATGAAGTGCCCAGGTCACTaGGCACTTTCTGATAAGATGCTGGTAGGCATCATA | + |
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Preference number: 3 (lower is better) Translates to: LLFMILMKCPGH*ALSDKMLVGII Trigger: TATGATGCCTACCAGCATCTTATCAGAAAGTGCCCAGTGACCTGGGCACTTCATTAAAATCATGAACAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR TCA 90 bp | AGACCCTCTAATCATCCCTGTGGCACCCGTGCCTCTGTGGCAAGGAAGCTCCATCTTCCTCAGCGTCCTTaGAGTCACAGTCCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RPSNHPCGTRASVARKLHLPQRP*SHSPAM Trigger: CATGGCAGGACTGTGACTTCAAGGACGCTGAGGAAG...ATGGAGCTTCCTTGCCACAGAGGCACGGGTGCCACAGGGATGATTAGAGGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR CCA 90 bp | ACAGAAGTGAGACCCTCTAATCATCCCTGTGGCACCCGTGCCTCTGTGGCAAGGCACCATCATCACCATTaGGAAGGGCCACGCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: TEVRPSNHPCGTRASVARHHHHH*EGPRSL Trigger: GAGACTGCGTGGCCCTTCCCAATGGTGATGATGGTG...CCTTGCCACAGAGGCACGGGTGCCACAGGGATGATTAGAGGGTCTCACTTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR CCA 90 bp | GCTATCCGCTCCTTACCAGAGCAGTGGATTCTGGTAGGCTTCTTCCTGTATTGGGCTAGCTGGCTTCCATaGGCGCCCAGGACATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AIRSLPEQWILVGFFLYWASWLP*APRTFG Trigger: CCCAAATGTCCTGGGCGCCCATGGAAGCCAGCTAGC...CCAATACAGGAAGAAGCCTACCAGAATCCACTGCTCTGGTAAGGAGCGGATAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| CDS-3UTR GCA 90 bp | AGACCCTCTAATCATCCCTGTGGCACCCGTGCCTCTGTGGCAAGGAAGCTCCATTCTTTTCCCCACAGTTaGTGTGCATTCTCCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPSNHPCGTRASVARKLHSFPHS*CAFSSG Trigger: GCCACTGGAGAATGCACAGCAACTGTGGGGAAAAGA...ATGGAGCTTCCTTGCCACAGAGGCACGGGTGCCACAGGGATGATTAGAGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR CCA 90 bp | TGTGGCCAAACTCAAGCTTTAGAGACAGCTCCAATTCGCCTCATGTCAGGGATGGCCACGCAGTCTCCATaGAGGGAAGGAAAACGCTCC | + |
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Preference number: 4 (lower is better) Translates to: CGQTQALETAPIRLMSGMATQSP*REGKRS Trigger: GGAGCGTTTTCCTTCCCTCCATGGAGACTGCGTGGC...CATCCCTGACATGAGGCGAATTGGAGCTGTCTCTAAAGCTTGAGTTTGGCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR CCA 90 bp | GCTATCCGCTCCTTACCAGAGCAGTGGATTCTGGTAGGCTTCTTCCTGTATTGGGGCGCCCAGGACATTTaGGGGAAGTTGCTTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: AIRSLPEQWILVGFFLYWGAQDI*GKLLLE Trigger: TTCCAGAAGCAACTTCCCCCAAATGTCCTGGGCGCC...CCAATACAGGAAGAAGCCTACCAGAATCCACTGCTCTGGTAAGGAGCGGATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| CDS-3UTR CCA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGGCTAGCTGGCTTCCATaGGCGCCCAGGACATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GHNVCAWAVERKAGRAFVASWLP*APRTFG Trigger: CCCAAATGTCCTGGGCGCCCATGGAAGCCAGCTAGC...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR CCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAGCCACGCAGTCTCCATaGAGGGAAGGAAAACGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRAATQSP*REGKRS Trigger: GGAGCGTTTTCCTTCCCTCCATGGAGACTGCGTGGC...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR CCA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGGCCACGCAGTCTCCATaGAGGGAAGGAAAACGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GHNVCAWAVERKAGRAFVATQSP*REGKRS Trigger: GGAGCGTTTTCCTTCCCTCCATGGAGACTGCGTGGC...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR TCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCACTTCCTCAGCGTCCTTaGAGTCACAGTCCTGCCATG | + |
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Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRALPQRP*SHSPAM Trigger: CATGGCAGGACTGTGACTTCAAGGACGCTGAGGAAG...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR TCA 90 bp | AGACCCTCTAATCATCCCTGTGGCACCCGTGCCTCTGTGGCAAGGAAGCTCCATAAGGGTACAGCTCTGTaGGAAGTTGGCAATTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: RPSNHPCGTRASVARKLHKGTAL*EVGNFV Trigger: AACAAAATTGCCAACTTCTCACAGAGCTGTACCCTT...ATGGAGCTTCCTTGCCACAGAGGCACGGGTGCCACAGGGATGATTAGAGGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR TCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAGGTTTCTGGTGTCCATaGCCAAGGCCATGCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRAGFWCP*PRPCLL Trigger: AAGGAGGCATGGCCTTGGTCATGGACACCAGAAACC...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
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| CDS-3UTR GCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATCCCCACAGTTGCTGTaGATTCTCCAGTGGCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRASPQLL*ILQWRL Trigger: AAGCCGCCACTGGAGAATGCACAGCAACTGTGGGGA...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR CCA 90 bp | AGACCCTCTAATCATCCCTGTGGCACCCGTGCCTCTGTGGCAAGGAAGCTCCATGCAATCTTGCAGGTCTaGGTGACTATGAAGAATTCA | + |
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Preference number: 4 (lower is better) Translates to: RPSNHPCGTRASVARKLHAILQV*VTMKNS Trigger: TGAATTCTTCATAGTCACCCAGACCTGCAAGATTGC...ATGGAGCTTCCTTGCCACAGAGGCACGGGTGCCACAGGGATGATTAGAGGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR CCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCACACCATCATCACCATTaGGAAGGGCCACGCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRAHHHHH*EGPRSL Trigger: GAGACTGCGTGGCCCTTCCCAATGGTGATGATGGTG...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR CCA 90 bp | AGGCTCAGAGGGATTCAGAATGATGGCAGCTTTATTATCGATCAGTCCACAGGGCACCATCATCACCATTaGGAAGGGCCACGCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: RLRGIQNDGSFIIDQSTGHHHHH*EGPRSL Trigger: GAGACTGCGTGGCCCTTCCCAATGGTGATGATGGTG...CCCTGTGGACTGATCGATAATAAAGCTGCCATCATTCTGAATCCCTCTGAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| CDS-3UTR CCA 90 bp | AGACCCTCTAATCATCCCTGTGGCACCCGTGCCTCTGTGGCAAGGAAGCTCCATCTGTGTTACTTTCCTTaGAGCATTTGGTTTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RPSNHPCGTRASVARKLHLCYFP*SIWFLW Trigger: CCAGAGAAACCAAATGCTCCAAGGAAAGTAACACAG...ATGGAGCTTCCTTGCCACAGAGGCACGGGTGCCACAGGGATGATTAGAGGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR CCA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGGGCGCCCAGGACATTTaGGGGAAGTTGCTTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: GHNVCAWAVERKAGRAFVGAQDI*GKLLLE Trigger: TTCCAGAAGCAACTTCCCCCAAATGTCCTGGGCGCC...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| 3UTR CAA 72 bp | ACCAGAGCAGTGGATTCTGGTAGGCTTCTTCCTGTATaGGTTCAGAAAGTGTGTGAGGCAGGCTCAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: TRAVDSGRLLPV*VQKVCEAGSEG Trigger: TCCCTCTGAGCCTGCCTCACACACTTTCTGAACCAATACAGGAAGAAGCCTACCAGAATCCACTGCTCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| CDS-3UTR GCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATCATGCAACCAGCCATaGCCATGTGTGGGTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRASCNQP*PCVGPC Trigger: ACAAGGACCCACACATGGGCATGGCTGGTTGCATGA...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
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| CDS-3UTR GCA 90 bp | TTACCAGAGCAGTGGATTCTGGTAGGCTTCTTCCTGTATTGGTTCAGAAAGTGTTCCCCACAGTTGCTGTaGATTCTCCAGTGGCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LPEQWILVGFFLYWFRKCSPQLL*ILQWRL Trigger: AAGCCGCCACTGGAGAATGCACAGCAACTGTGGGGA...ACACTTTCTGAACCAATACAGGAAGAAGCCTACCAGAATCCACTGCTCTGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| CDS-3UTR GCA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGTCTTTTCCCCACAGTTaGTGTGCATTCTCCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GHNVCAWAVERKAGRAFVSFPHS*CAFSSG Trigger: GCCACTGGAGAATGCACAGCAACTGTGGGGAAAAGA...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR CCA 90 bp | GCTATCCGCTCCTTACCAGAGCAGTGGATTCTGGTAGGCTTCTTCCTGTATTGGGTCATATCTAATGCTTaGCATTTCACAGTCGGGACG | + |
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Preference number: 4 (lower is better) Translates to: AIRSLPEQWILVGFFLYWVISNA*HFTVGT Trigger: CGTCCCGACTGTGAAATGCCAAGCATTAGATATGAC...CCAATACAGGAAGAAGCCTACCAGAATCCACTGCTCTGGTAAGGAGCGGATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| CDS-3UTR CCA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGAGCCATGCCCATGTGTaGGTCCTTGTTCAGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: GHNVCAWAVERKAGRAFVSHAHV*VLVQFL Trigger: CAGAAACTGAACAAGGACCCACACATGGGCATGGCT...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
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| CDS-3UTR TCA 90 bp | GTCTCTTGGTTTTCTTTGTTTTCTAGACACGGATGCCACAGTTCTGTATGCAGACTTCCTCAGCGTCCTTaGAGTCACAGTCCTGCCATG | + |
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Preference number: 4 (lower is better) Translates to: VSWFSLFSRHGCHSSVCRLPQRP*SHSPAM Trigger: CATGGCAGGACTGTGACTTCAAGGACGCTGAGGAAG...TCTGCATACAGAACTGTGGCATCCGTGTCTAGAAAACAAAGAAAACCAAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| CDS-3UTR CCA 90 bp | TGTGGCCAAACTCAAGCTTTAGAGACAGCTCCAATTCGCCTCATGTCAGGGATGAATAGGCTTTCAGTATaGGGGCCTTACTTGGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: CGQTQALETAPIRLMSGMNRLSV*GPYLEQ Trigger: TTGCTCCAAGTAAGGCCCCCATACTGAAAGCCTATT...CATCCCTGACATGAGGCGAATTGGAGCTGTCTCTAAAGCTTGAGTTTGGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR CCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCACCTGGCAATGTAGGGTaGACTTACAGTTCTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRAPGNVG*TYSSSF Trigger: GAAGGAAGAACTGTAAGTCCACCCTACATTGCCAGG...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
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| CDS-3UTR CCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATCTCTTCTTGCTCCCTaGCAATGTAGGGTGGACTTA | + |
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Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRASLLAP*QCRVDL Trigger: TAAGTCCACCCTACATTGCCAGGGAGCAAGAAGAGA...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
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| CDS-3UTR CCA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGCCCACTGTGTGTGTATaGTCATCACCATCTTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: GHNVCAWAVERKAGRAFVPTVCV*SSPSSL Trigger: AAGGGAAGATGGTGATGACCATACACACACAGTGGG...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
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| CDS-3UTR TCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAGAGAAATCCACAGCCTaGAATACAGCCTCATCATTG | + |
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Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRAEKSTA*NTASSL Trigger: CAATGATGAGGCTGTATTTCAGGCTGTGGATTTCTC...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR GCA 90 bp | TTGTTCATGATTTTAATGAAGTGCCCAGGTCACTGGGCACTTTCTGATAAGATGTCCCCACAGTTGCTGTaGATTCTCCAGTGGCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LFMILMKCPGHWALSDKMSPQLL*ILQWRL Trigger: AAGCCGCCACTGGAGAATGCACAGCAACTGTGGGGA...CATCTTATCAGAAAGTGCCCAGTGACCTGGGCACTTCATTAAAATCATGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR CCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAAATAGGCTTTCAGTATaGGGGCCTTACTTGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRANRLSV*GPYLEQ Trigger: TTGCTCCAAGTAAGGCCCCCATACTGAAAGCCTATT...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR CCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAGTCATATCTAATGCTTaGCATTTCACAGTCGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRAVISNA*HFTVGT Trigger: CGTCCCGACTGTGAAATGCCAAGCATTAGATATGAC...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR CCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAGAAAGGAGAAAAACCTaGAGGCCTTCTTGCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRAERRKT*RPSCHF Trigger: GAAATGGCAAGAAGGCCTCCAGGTTTTTCTCCTTTC...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCTCAGAGGGATTCAGAATGATGGCAGCTTTATTATCGATCAGTCCACAGGAAAGGAGAAAAACCTaGAGGCCTTCTTGCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGSEGFRMMAALLSISPQERRKT*RPSCHF Trigger: GAAATGGCAAGAAGGCCTCCAGGTTTTTCTCCTTTC...CTGTGGACTGATCGATAATAAAGCTGCCATCATTCTGAATCCCTCTGAGCCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
||
| CDS-3UTR TCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAGTAAAGAGGTGGCTGTaGTCTGTGTTGTTGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRAVKRWL*SVLLLK Trigger: TTTCAACAACAACACAGATCACAGCCACCTCTTTAC...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR TCA 90 bp | CAAAAAGAGCAAGTTCTCACAGAAGTGAGACCCTCTAATCATCCCTGTGGCACCGTAAAGAGGTGGCTGTaGTCTGTGTTGTTGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QKEQVLTEVRPSNHPCGTVKRWL*SVLLLK Trigger: TTTCAACAACAACACAGATCACAGCCACCTCTTTAC...GGTGCCACAGGGATGATTAGAGGGTCTCACTTCTGTGAGAACTTGCTCTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR TCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAAAGGGTACAGCTCTGTaGGAAGTTGGCAATTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRAKGTAL*EVGNFV Trigger: AACAAAATTGCCAACTTCTCACAGAGCTGTACCCTT...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR GCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTGATTTGCTTTTCATaGAACCAGCCATGCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRALICFS*NQPCPC Trigger: ACATGGGCATGGCTGGTTGCATGAAAAGCAAATCAA...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
||
| CDS-3UTR CCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAGCAATCTTGCAGGTCTaGGTGACTATGAAGAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRAAILQV*VTMKNS Trigger: TGAATTCTTCATAGTCACCCAGACCTGCAAGATTGC...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR CCA 90 bp | ATTCTGGTAGGCTTCTTCCTGTATTGGTTCAGAAAGTGTGTGAGGCAGGCTCAGGCAATCTTGCAGGTCTaGGTGACTATGAAGAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILVGFFLYWFRKCVRQAQAILQV*VTMKNS Trigger: TGAATTCTTCATAGTCACCCAGACCTGCAAGATTGC...CTGAGCCTGCCTCACACACTTTCTGAACCAATACAGGAAGAAGCCTACCAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
||
| CDS-3UTR CCA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGCTGTGTTACTTTCCTTaGAGCATTTGGTTTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GHNVCAWAVERKAGRAFVLCYFP*SIWFLW Trigger: CCAGAGAAACCAAATGCTCCAAGGAAAGTAACACAG...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCTCAGAGGGATTCAGAATGATGGCAGCTTTATTATCGATCAGTCCACAGCTGTGTTACTTTCCTTaGAGCATTTGGTTTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSEGFRMMAALLSISPQLCYFP*SIWFLW Trigger: CCAGAGAAACCAAATGCTCCAAGGAAAGTAACACAG...CTGTGGACTGATCGATAATAAAGCTGCCATCATTCTGAATCCCTCTGAGCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
||
| CDS-3UTR CCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAAAAGACTCTGTTCTCTaGGTAGTCTGCTTTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRAKDSVL*VVCFTL Trigger: CAGTGTAAAGCAGACTACCCAGAGAACAGAGTCTTT...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
||
| CDS-3UTR CCA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGGGGGGAAGTTGCTTCTaGAAAATCAGATATCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GHNVCAWAVERKAGRAFVGGSCF*KIRYQL Trigger: AAGCTGATATCTGATTTTCCAGAAGCAACTTCCCCC...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCTCAGAGGGATTCAGAATGATGGCAGCTTTATTATCGATCAGTCCACAGGGGGGAAGTTGCTTCTaGAAAATCAGATATCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGSEGFRMMAALLSISPQGGSCF*KIRYQL Trigger: AAGCTGATATCTGATTTTCCAGAAGCAACTTCCCCC...CTGTGGACTGATCGATAATAAAGCTGCCATCATTCTGAATCCCTCTGAGCCTGC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| 3UTR CAA 72 bp | ATTATCGATCAGTCCACAGGGAGTTATAAAGTCCCATaGACAGGCTGTTCTGATCACCATGGCTGGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: IIDQSTGSYKVP*TGCSDHHGWMT Trigger: AGTCATCCAGCCATGGTGATCAGAACAGCCTGTCAATGGGACTTTATAACTCCCTGTGGACTGATCGATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR TCA 90 bp | ATGTTCCAGAGAGAGACTATAAGCGTCTGTGGCCAAACTCAAGCTTTAGAGACAGAGAAATCCACAGCCTaGAATACAGCCTCATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: MFQRETISVCGQTQALETEKSTA*NTASSL Trigger: CAATGATGAGGCTGTATTTCAGGCTGTGGATTTCTC...TGTCTCTAAAGCTTGAGTTTGGCCACAGACGCTTATAGTCTCTCTCTGGAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
||
| CDS-3UTR TCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAGATCTGTGTTGTTGTTaGAATGTTCGATGGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRADLCCC*NVRWSV Trigger: AACACTCCATCGAACATTTCAACAACAACACAGATC...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR TCA 90 bp | ATTCTGGTAGGCTTCTTCCTGTATTGGTTCAGAAAGTGTGTGAGGCAGGCTCAGGATCTGTGTTGTTGTTaGAATGTTCGATGGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILVGFFLYWFRKCVRQAQDLCCC*NVRWSV Trigger: AACACTCCATCGAACATTTCAACAACAACACAGATC...CTGAGCCTGCCTCACACACTTTCTGAACCAATACAGGAAGAAGCCTACCAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
||
| CDS-3UTR TCA 90 bp | ACCAGAGCAGTGGATTCTGGTAGGCTTCTTCCTGTATTGGTTCAGAAAGTGTGTAAGGGTACAGCTCTGTaGGAAGTTGGCAATTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TRAVDSGRLLPVLVQKVCKGTAL*EVGNFV Trigger: AACAAAATTGCCAACTTCTCACAGAGCTGTACCCTT...ACACACTTTCTGAACCAATACAGGAAGAAGCCTACCAGAATCCACTGCTCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
||
| CDS-3UTR TCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAATGAAATCTGAGTCCTaGAAACCAGAAGAGGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRAMKSES*KPEEVT Trigger: TGTTACCTCTTCTGGTTTTCAGGACTCAGATTTCAT...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
||
| CDS-3UTR GCA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGGTTCTCTGGGTAGTCTaGTTTACACTGTTTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHNVCAWAVERKAGRAFVVLWVV*FTLFLS Trigger: AGACAAAAACAGTGTAAAGCAGACTACCCAGAGAAC...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
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| CDS-3UTR CCA 90 bp | ATGTTCCAGAGAGAGACTATAAGCGTCTGTGGCCAAACTCAAGCTTTAGAGACAGTCATATCTAATGCTTaGCATTTCACAGTCGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: MFQRETISVCGQTQALETVISNA*HFTVGT Trigger: CGTCCCGACTGTGAAATGCCAAGCATTAGATATGAC...TGTCTCTAAAGCTTGAGTTTGGCCACAGACGCTTATAGTCTCTCTCTGGAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR CCA 90 bp | ATGTTCCAGAGAGAGACTATAAGCGTCTGTGGCCAAACTCAAGCTTTAGAGACAGAAAGGAGAAAAACCTaGAGGCCTTCTTGCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: MFQRETISVCGQTQALETERRKT*RPSCHF Trigger: GAAATGGCAAGAAGGCCTCCAGGTTTTTCTCCTTTC...TGTCTCTAAAGCTTGAGTTTGGCCACAGACGCTTATAGTCTCTCTCTGGAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR TCA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAATCTTCAATGAAATCTaGGTCCTGAAAACCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DLGHNVCAWAVERKAGRAIFNEI*VLKTRR Trigger: TCTTCTGGTTTTCAGGACTCAGATTTCATTGAAGAT...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
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| CDS-3UTR GCA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGTTATTAGCCTTGATTTaGTTTTCATGCAACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GHNVCAWAVERKAGRAFVLLALI*FSCNQP Trigger: TGGCTGGTTGCATGAAAAGCAAATCAAGGCTAATAA...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
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| CDS-3UTR GCA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGACATTTGGGGGAAGTTaGTTCTGGAAAATCAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: GHNVCAWAVERKAGRAFVTFGGS*FWKIRY Trigger: ATATCTGATTTTCCAGAAGCAACTTCCCCCAAATGT...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR TCA 90 bp | TCAAGTCTGAATTTTATTTCCACTAGGATCAGGGTGATGAAGACGATGGTCCCGGATCTGTGTTGTTGTTaGAATGTTCGATGGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLNFISTRIRVMKTMVPDLCCC*NVRWSV Trigger: AACACTCCATCGAACATTTCAACAACAACACAGATC...CGGGACCATCGTCTTCATCACCCTGATCCTAGTGGAAATAAAATTCAGACTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR TCA 90 bp | TCTTGGTTTTCTTTGTTTTCTAGACACGGATGCCACAGTTCTGTATGCAGATGCGTAAAGAGGTGGCTGTaGTCTGTGTTGTTGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SWFSLFSRHGCHSSVCRCVKRWL*SVLLLK Trigger: TTTCAACAACAACACAGATCACAGCCACCTCTTTAC...GCATCTGCATACAGAACTGTGGCATCCGTGTCTAGAAAACAAAGAAAACCAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| CDS-3UTR GCA 90 bp | CTTACCAGAGCAGTGGATTCTGGTAGGCTTCTTCCTGTATTGGTTCAGAAAGTGACATTTGGGGGAAGTTaGTTCTGGAAAATCAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: LTRAVDSGRLLPVLVQKVTFGGS*FWKIRY Trigger: ATATCTGATTTTCCAGAAGCAACTTCCCCCAAATGT...CACTTTCTGAACCAATACAGGAAGAAGCCTACCAGAATCCACTGCTCTGGTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| CDS-3UTR CAA 90 bp | GCGCTCCACACATCCCAGGATTCTTCTGGTCCTTCCCTCTGGGTCATTGCTGGGGCTTCCTCAGCGTCCTaGAAGTCACAGTCCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ALHTSQDSSGPSLWVIAGASSAS*KSQSCH Trigger: ATGGCAGGACTGTGACTTCAAGGACGCTGAGGAAGC...CCCAGCAATGACCCAGAGGGAAGGACCAGAAGAATCCTGGGATGTGTGGAGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR CAA 90 bp | GCGCTCCACACATCCCAGGATTCTTCTGGTCCTTCCCTCTGGGTCATTGCTGGGTTACTTGGAGCAATCTaGCAGGTCTGGGTGACTATG | + |
|
Preference number: 5 (lower is better) Translates to: ALHTSQDSSGPSLWVIAGLLGAI*QVWVTM Trigger: CATAGTCACCCAGACCTGCAAGATTGCTCCAAGTAA...CCCAGCAATGACCCAGAGGGAAGGACCAGAAGAATCCTGGGATGTGTGGAGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS-3UTR CAA 90 bp | TTGGTTCAGAAAGTGTGTGAGGCAGGCTCAGAGGGATTCAGAATGATGGCAGCTCAGCCAGGGCAAGGCTaGGGAAGCGCTTCTACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LVQKVCEAGSEGFRMMAAQPGQG*GSASTK Trigger: TTTGGTAGAAGCGCTTCCCAAGCCTTGCCCTGGCTG...AGCTGCCATCATTCTGAATCCCTCTGAGCCTGCCTCACACACTTTCTGAACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| CDS GCA 90 bp | TTCATGCAACCAGCCATGCCCATGTGTGGGTCCTTGTTCAGTTTCTaGATCCCTCTCTTCTTGCTCCCTGGCAATGTAGGGTGGACTTAC | + |
|
Preference number: 5 (lower is better) Translates to: FMQPAMPMCGSLFSF*IPLFLLPGNVGWTY Trigger: GTAAGTCCACCCTACATTGCCAGGGAGCAAGAAGAGAGGGATGCAGAAACTGAACAAGGACCCACACATGGGCATGGCTGGTTGCATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
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| CDS-3UTR CAA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCACAGCCAGGGCAAGGCTaGGGAAGCGCTTCTACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: DLGHNVCAWAVERKAGRAQPGQG*GSASTK Trigger: TTTGGTAGAAGCGCTTCCCAAGCCTTGCCCTGGCTG...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR CAA 90 bp | CTCCAATTCGCCTCATGTCAGGGATGGCTGAAAGGAGACCACTGTAAAATCATCCAGCCAGGGCAAGGCTaGGGAAGCGCTTCTACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQFASCQGWLKGDHCKIIQPGQG*GSASTK Trigger: TTTGGTAGAAGCGCTTCCCAAGCCTTGCCCTGGCTG...GATGATTTTACAGTGGTCTCCTTTCAGCCATCCCTGACATGAGGCGAATTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
||
| CDS-3UTR CAA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAGCTTCCTCAGCGTCCTaGAAGTCACAGTCCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DLGHNVCAWAVERKAGRAASSAS*KSQSCH Trigger: ATGGCAGGACTGTGACTTCAAGGACGCTGAGGAAGC...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR CAA 90 bp | ACAGAAGTGAGACCCTCTAATCATCCCTGTGGCACCCGTGCCTCTGTGGCAAGGTCCTTCTTTTGTTTCTaGTACTGTGACACTCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TEVRPSNHPCGTRASVARSFFCF*YCDTPE Trigger: TTCCGGAGTGTCACAGTACAAGAAACAAAAGAAGGA...CCTTGCCACAGAGGCACGGGTGCCACAGGGATGATTAGAGGGTCTCACTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
||
| CDS-3UTR CAA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATGCATCCCTCTCTTCTaGCTCCCTGGCAATGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DLGHNVCAWAVERKAGRACIPLF*LPGNVG Trigger: CCCTACATTGCCAGGGAGCAAGAAGAGAGGGATGCA...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
||
| CDS TCA 90 bp | AGTGTCATATGGTGGGGTGGTAGCTACCACATCTTCAATGAAATCTaGGTCCTGAAAACCAGAAGAGGTAACAGTTGGCTGGGCTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVIWWGGSYHIFNEI*VLKTRRGNSWLGSG Trigger: CCCCGAGCCCAGCCAACTGTTACCTCTTCTGGTTTTCAGGACTCAGATTTCATTGAAGATGTGGTAGCTACCACCCCACCATATGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
||
| CDS CCA 90 bp | TTCTGTTGTTTCTGTGTTTGGATCCTTCCAGCTAGCTGGCTTCCATaGGCGCCCAGGACATTTGGGGGAAGTTGCTTCTGGAAAATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FCCFCVWILPASWLP*APRTFGGSCFWKIR Trigger: TCTGATTTTCCAGAAGCAACTTCCCCCAAATGTCCTGGGCGCCCATGGAAGCCAGCTAGCTGGAAGGATCCAAACACAGAAACAACAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
||
| CDS-3UTR CAA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGCCCATGTGTGGGTCCTaGTTCAGTTTCTGCATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GHNVCAWAVERKAGRAFVPMCGS*FSFCIP Trigger: AGGGATGCAGAAACTGAACAAGGACCCACACATGGG...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
||
| CDS-3UTR CAA 90 bp | ATGTTCCAGAGAGAGACTATAAGCGTCTGTGGCCAAACTCAAGCTTTAGAGACAGCTCTGCCCCTGCCTTaGAGAGTCTGCCCTTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: MFQRETISVCGQTQALETALPLP*RVCPCT Trigger: AGTACAAGGGCAGACTCTCAAAGGCAGGGGCAGAGC...TGTCTCTAAAGCTTGAGTTTGGCCACAGACGCTTATAGTCTCTCTCTGGAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
||
| CDS CCA 90 bp | GAAAGGCTATCTGGCTGTACATGGATATCAGGGATCAAATCATCATaGGCCCCAGTGTCATATGGTGGGGTGGTAGCTACCACATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ERLSGCTWISGIKSS*APVSYGGVVATTSS Trigger: TGAAGATGTGGTAGCTACCACCCCACCATATGACACTGGGGCCCATGATGATTTGATCCCTGATATCCATGTACAGCCAGATAGCCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
||
| CDS-3UTR CAA 90 bp | GGGCAAAAAGAGCAAGTTCTCACAGAAGTGAGACCCTCTAATCATCCCTGTGGCCTTTGTCCAAGGTGCTaGATCTCACAATCTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GQKEQVLTEVRPSNHPCGLCPRC*ISQSSA Trigger: GGCAGAAGATTGTGAGATCAAGCACCTTGGACAAAG...GCCACAGGGATGATTAGAGGGTCTCACTTCTGTGAGAACTTGCTCTTTTTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
||
| CDS CCA 90 bp | TGGAGTGTTTCAGAACAGGCTCCAGGTCTGGACTATCTGTCGATATaGCATGCACACAACCAATACAGGGGAAATAGGCTTTCAGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: WSVSEQAPGLDYLSI*HAHNQYRGNRLSVW Trigger: CCATACTGAAAGCCTATTTCCCCTGTATTGGTTGTGTGCATGCCATATCGACAGATAGTCCAGACCTGGAGCCTGTTCTGAAACACTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 ENSMUST00000125790.8 |
||
| CDS-3UTR CAA 90 bp | TCTTGGTTTTCTTTGTTTTCTAGACACGGATGCCACAGTTCTGTATGCAGATGCGCTTCCTCAGCGTCCTaGAAGTCACAGTCCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SWFSLFSRHGCHSSVCRCASSAS*KSQSCH Trigger: ATGGCAGGACTGTGACTTCAAGGACGCTGAGGAAGC...GCATCTGCATACAGAACTGTGGCATCCGTGTCTAGAAAACAAAGAAAACCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
||
| CDS-3UTR CAA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGTTACTTGGAGCAATCTaGCAGGTCTGGGTGACTATG | + |
|
Preference number: 5 (lower is better) Translates to: GHNVCAWAVERKAGRAFVLLGAI*QVWVTM Trigger: CATAGTCACCCAGACCTGCAAGATTGCTCCAAGTAA...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
||
| CDS-3UTR CAA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGCTTTGTCCAAGGTGCTaGATCTCACAATCTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GHNVCAWAVERKAGRAFVLCPRC*ISQSSA Trigger: GGCAGAAGATTGTGAGATCAAGCACCTTGGACAAAG...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTGTATTGGTTCAGAAAGTGTGTGAGGCAGGCTCAGAGGGATTCAGAATGCTTTGTCCAAGGTGCTaGATCTCACAATCTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPVLVQKVCEAGSEGFRMLCPRC*ISQSSA Trigger: GGCAGAAGATTGTGAGATCAAGCACCTTGGACAAAG...CATTCTGAATCCCTCTGAGCCTGCCTCACACACTTTCTGAACCAATACAGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
||
| CDS CCA 90 bp | GTTGTTGAAATGTTCGATGGAGTGTTTCAGAACAGGCTCCAGGTCTaGACTATCTGTCGATATGGCATGCACACAACCAATACAGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VVEMFDGVFQNRLQV*TICRYGMHTTNTGE Trigger: TTCCCCTGTATTGGTTGTGTGCATGCCATATCGACAGATAGTCCAGACCTGGAGCCTGTTCTGAAACACTCCATCGAACATTTCAACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 ENSMUST00000125790.8 |
||
| CDS CCA 90 bp | CTACATTCACCATCATCACCATTGGGAAGGGCCACGCAGTCTCCATaGAGGGAAGGAAAACGCTCCTTTGAACAATTTGTTTGCACAATT | + |
|
Preference number: 5 (lower is better) Translates to: LHSPSSPLGRATQSP*REGKRSFEQFVCTI Trigger: AATTGTGCAAACAAATTGTTCAAAGGAGCGTTTTCCTTCCCTCCATGGAGACTGCGTGGCCCTTCCCAATGGTGATGATGGTGAATGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
||
| CDS CCA 90 bp | GAAAAACCTGGAGGCCTTCTTGCCATTTCAGTCATATCTAATGCTTaGCATTTCACAGTCGGGACGACTTTGTTCTCCCAAGGTCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: EKPGGLLAISVISNA*HFTVGTTLFSQGLM Trigger: CATGAGACCTTGGGAGAACAAAGTCGTCCCGACTGTGAAATGCCAAGCATTAGATATGACTGAAATGGCAAGAAGGCCTCCAGGTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
||
| CDS-3UTR CAA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAAACCTGGAGGCCTTCTaGCCATTTCAGTCATATCTA | + |
|
Preference number: 5 (lower is better) Translates to: DLGHNVCAWAVERKAGRANLEAF*PFQSYL Trigger: TAGATATGACTGAAATGGCAAGAAGGCCTCCAGGTT...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
||
| CDS-3UTR CAA 90 bp | GAGACTATAAGCGTCTGTGGCCAAACTCAAGCTTTAGAGACAGCTCCAATTCGCAACCTGGAGGCCTTCTaGCCATTTCAGTCATATCTA | + |
|
Preference number: 5 (lower is better) Translates to: ETISVCGQTQALETAPIRNLEAF*PFQSYL Trigger: TAGATATGACTGAAATGGCAAGAAGGCCTCCAGGTT...GCGAATTGGAGCTGTCTCTAAAGCTTGAGTTTGGCCACAGACGCTTATAGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
||
| CDS-3UTR CAA 90 bp | TTGGTTCAGAAAGTGTGTGAGGCAGGCTCAGAGGGATTCAGAATGATGGCAGCTTCCTTCTTTTGTTTCTaGTACTGTGACACTCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LVQKVCEAGSEGFRMMAASFFCF*YCDTPE Trigger: TTCCGGAGTGTCACAGTACAAGAAACAAAAGAAGGA...AGCTGCCATCATTCTGAATCCCTCTGAGCCTGCCTCACACACTTTCTGAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
||
| CDS TCA 90 bp | GGGAAGGGCCACGCAGTCTCCATGGAGGGAAGGAAAACGCTCCTTTaGACAATTTGTTTGCACAATTGTGTAGGTAATGTCAAAATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GKGHAVSMEGRKTLL*TICLHNCVGNVKIQ Trigger: CTGAATTTTGACATTACCTACACAATTGTGCAAACAAATTGTTCAAAGGAGCGTTTTCCTTCCCTCCATGGAGACTGCGTGGCCCTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
||
| CDS CCA 90 bp | TCTTGTAATAGAAAGGATGGTCATTCTCTGCATTTAGCTGTGCAATaGAATGACCAAGCACCTCCTTCAGCTCTGGGCTGTCTACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SCNRKDGHSLHLAVQ*NDQAPPSALGCLQV Trigger: TACCTGTAGACAGCCCAGAGCTGAAGGAGGTGCTTGGTCATTCCATTGCACAGCTAAATGCAGAGAATGACCATCCTTTCTATTACAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
||
| CDS CCA 90 bp | AGCATCAAGGAGATCAAAATCAGAAAATTCTGTTGTTTCTGTGTTTaGATCCTTCCAGCTAGCTGGCTTCCATGGGCGCCCAGGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: SIKEIKIRKFCCFCV*ILPASWLPWAPRTF Trigger: AAATGTCCTGGGCGCCCATGGAAGCCAGCTAGCTGGAAGGATCCAAACACAGAAACAACAGAATTTTCTGATTTTGATCTCCTTGATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTCCTGTATTGGTTCAGAAAGTGTGTGAGGCAGGCTCAGAGGGATTCAGAAAACCTGGAGGCCTTCTaGCCATTTCAGTCATATCTA | + |
|
Preference number: 5 (lower is better) Translates to: FFLYWFRKCVRQAQRDSENLEAF*PFQSYL Trigger: TAGATATGACTGAAATGGCAAGAAGGCCTCCAGGTT...TTCTGAATCCCTCTGAGCCTGCCTCACACACTTTCTGAACCAATACAGGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
||
| CDS-3UTR CAA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGTCCTTCTTTTGTTTCTaGTACTGTGACACTCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GHNVCAWAVERKAGRAFVSFFCF*YCDTPE Trigger: TTCCGGAGTGTCACAGTACAAGAAACAAAAGAAGGA...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS-3UTR CAA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATGTATTCAGAAGAGCTaGCCAAAGACTCTGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DLGHNVCAWAVERKAGRACIQKS*PKTLFS Trigger: AGAGAACAGAGTCTTTGGCAAGCTCTTCTGAATACA...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
||
| CDS TCA 90 bp | CTTTTTACCCCAGGGTTAAACTGCTTCAGAGAGAAATCCACAGCCTaGAATACAGCCTCATCATTGCAGTCAATTTCCTGCGCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFTPGLNCFREKSTA*NTASSLQSISCASS Trigger: AGAAGAAGCGCAGGAAATTGACTGCAATGATGAGGCTGTATTTCAGGCTGTGGATTTCTCTCTGAAGCAGTTTAACCCTGGGGTAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
||
| CDS-3UTR CAA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGGCTCCTTTGAACAATTaGTTTGCACAATTGTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GHNVCAWAVERKAGRAFVAPLNN*FAQLCR Trigger: CCTACACAATTGTGCAAACAAATTGTTCAAAGGAGC...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
||
| CDS-3UTR CAA 90 bp | GACTTAGGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCAATAATCAAGTTTAAGTaGATGTCCATGACCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DLGHNVCAWAVERKAGRAIIKFK*MSMTKA Trigger: GGCCTTGGTCATGGACATCAACTTAAACTTGATTAT...TGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACCTAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
||
| CDS-3UTR CAA 90 bp | GGTCACAATGTTTGTGCTTGGGCAGTAGAAAGAAAGGCTGGGAGAGCATTTGTGATCACCATCTTCCCTTaGGTGTCTAAGATAATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GHNVCAWAVERKAGRAFVITIFP*VSKIIK Trigger: CTTGATTATCTTAGACACCAAAGGGAAGATGGTGAT...CACAAATGCTCTCCCAGCCTTTCTTTCTACTGCCCAAGCACAAACATTGTGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
||
| CDS TCA 90 bp | AGTGTCATATGGTGGGGTGGTAGCTACCACATCTTCAATGAAATCTaGGTCAGTTCTTCCTTCTTTTGTTTCTTGTACTGTGACACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SVIWWGGSYHIFNEI*VSSSFFCFLYCDTP Trigger: CGGAGTGTCACAGTACAAGAAACAAAAGAAGGAAGAACTGACTCAGATTTCATTGAAGATGTGGTAGCTACCACCCCACCATATGACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
||
| CDS TCA 90 bp | TGTCTGTGGGCACTTTTTACTTTTCTGAGAGTAAAGAGGTGGCTGTaGTCTGTGTTGTTGTTGAAATGTTCGATGGAGTGTTTCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: CLWALFTFLRVKRWL*SVLLLKCSMECFRT Trigger: TGTTCTGAAACACTCCATCGAACATTTCAACAACAACACAGATCACAGCCACCTCTTTACTCTCAGAAAAGTAAAAAGTGCCCACAGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 ENSMUST00000125790.8 |
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| CDS-3UTR CAA 90 bp | GTCTCTTGGTTTTCTTTGTTTTCTAGACACGGATGCCACAGTTCTGTATGCAGAGCTCCTTTGAACAATTaGTTTGCACAATTGTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSWFSLFSRHGCHSSVCRAPLNN*FAQLCR Trigger: CCTACACAATTGTGCAAACAAATTGTTCAAAGGAGC...TCTGCATACAGAACTGTGGCATCCGTGTCTAGAAAACAAAGAAAACCAAGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTCATGATTTTAATGAAGTGCCCAGGTCACTGGGCACTTTCTGATAAGATGGCTCCTTTGAACAATTaGTTTGCACAATTGTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFMILMKCPGHWALSDKMAPLNN*FAQLCR Trigger: CCTACACAATTGTGCAAACAAATTGTTCAAAGGAGC...CATCTTATCAGAAAGTGCCCAGTGACCTGGGCACTTCATTAAAATCATGAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS CCA 90 bp | GATGTAGTACTGTATTCAGAAGAGCTTGCCAAAGACTCTGTTCTCTaGGTAGTCTGCTTTACACTGTTTTTGTCTTTATTTGTATGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: DVVLYSEELAKDSVL*VVCFTLFLSLFVCL Trigger: TAAGCATACAAATAAAGACAAAAACAGTGTAAAGCAGACTACCCAGAGAACAGAGTCTTTGGCAAGCTCTTCTGAATACAGTACTACATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
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| CDS CAA 72 bp | CTGCCTGACGCTCAGGCGCTGGCTCTGCCCCTGCCTTaGAGAGTCTGCCCTTGTACTCGCACGCGCGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LPDAQALALPLP*RVCPCTRTRVG Trigger: TCCTACGCGCGTGCGAGTACAAGGGCAGACTCTCAAAGGCAGGGGCAGAGCCAGCGCCTGAGCGTCAGGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039492.14 |
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| CDS GCA 72 bp | GGCTTCCTCAGCGTCCTTGAAGTCACAGTCCTGCCATaGGAGGCCACTCTGAGCAGAGCAGTTGCCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GFLSVLEVTVLP*EATLSRAVALL Trigger: AAGGAGGGCAACTGCTCTGCTCAGAGTGGCCTCGCATGGCAGGACTGTGACTTCAAGGACGCTGAGGAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 ENSMUST00000125790.8 |
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| CDS CAA 90 bp | CAAGGCCATGTGGTTTCTGGTGTCCATGACCAAGGCCATGCCTCCTaGGGGACCAATGGCCATGGTCATGCCCATGCTTATGACCACGGT | + |
|
Preference number: 6 (lower is better) Translates to: QGHVVSGVHDQGHAS*GTNGHGHAHAYDHG Trigger: ACCGTGGTCATAAGCATGGGCATGACCATGGCCATTGGTCCCCAAGGAGGCATGGCCTTGGTCATGGACACCAGAAACCACATGGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
||
| CDS CCA 72 bp | TTCTGTGTTTGGATCCTTCCAGCTAGCTGGCTTCCATaGGCGCCCAGGACATTTGGGGGAAGTTGCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FCVWILPASWLP*APRTFGGSCFW Trigger: CCAGAAGCAACTTCCCCCAAATGTCCTGGGCGCCCATGGAAGCCAGCTAGCTGGAAGGATCCAAACACAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS CAA 72 bp | TTCCAGCTAGCTGGCTTCCATGGGCGCCCAGGACATTaGGGGGAAGTTGCTTCTGGAAAATCAGATATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FQLAGFHGRPGH*GEVASGKSDIS Trigger: GCTGATATCTGATTTTCCAGAAGCAACTTCCCCCAAATGTCCTGGGCGCCCATGGAAGCCAGCTAGCTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
||
| CDS CCA 72 bp | GCACACAACCAATACAGGGGAAATAGGCTTTCAGTATaGGGGCCTTACTTGGAGCAATCTTGCAGGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AHNQYRGNRLSV*GPYLEQSCRSG Trigger: CCCAGACCTGCAAGATTGCTCCAAGTAAGGCCCCCATACTGAAAGCCTATTTCCCCTGTATTGGTTGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 ENSMUST00000125790.8 |
||
| CDS CCA 72 bp | TCTGGCTGTACATGGATATCAGGGATCAAATCATCATaGGCCCCAGTGTCATATGGTGGGGTGGTAGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: SGCTWISGIKSS*APVSYGGVVAT Trigger: GGTAGCTACCACCCCACCATATGACACTGGGGCCCATGATGATTTGATCCCTGATATCCATGTACAGCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
||
| CDS CAA 72 bp | CTTTTCATGCAACCAGCCATGCCCATGTGTGGGTCCTaGTTCAGTTTCTGCATCCCTCTCTTCTTGCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LFMQPAMPMCGS*FSFCIPLFLLP Trigger: AGGGAGCAAGAAGAGAGGGATGCAGAAACTGAACAAGGACCCACACATGGGCATGGCTGGTTGCATGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
||
| CDS TCA 72 bp | GGATGGTCATTCTCTGCATTTAGCTGTGCAATGGAATaGCCAAGCACCTCCTTCAGCTCTGGGCTGTCTACA | + |
|
Preference number: 6 (lower is better) Translates to: GWSFSAFSCAME*PSTSFSSGLST Trigger: TGTAGACAGCCCAGAGCTGAAGGAGGTGCTTGGTCATTCCATTGCACAGCTAAATGCAGAGAATGACCATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
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| CDS CCA 72 bp | CCATCATCACCATTGGGAAGGGCCACGCAGTCTCCATaGAGGGAAGGAAAACGCTCCTTTGAACAATTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PSSPLGRATQSP*REGKRSFEQFV Trigger: AACAAATTGTTCAAAGGAGCGTTTTCCTTCCCTCCATGGAGACTGCGTGGCCCTTCCCAATGGTGATGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
||
| CDS CAA 72 bp | ATGAAGAGATTTCCTCTACATTCACCATCATCACCATaGGGAAGGGCCACGCAGTCTCCATGGAGGGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: MKRFPLHSPSSP*GRATQSPWREG Trigger: TCCTTCCCTCCATGGAGACTGCGTGGCCCTTCCCAATGGTGATGATGGTGAATGTAGAGGAAATCTCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
||
| CDS CAA 90 bp | CTTGATTTGCTTTTCATGCAACCAGCCATGCCCATGTGTGGGTCCTaGTTCAGTTTCTGCATCCCTCTCTTCTTGCTCCCTGGCAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: LDLLFMQPAMPMCGS*FSFCIPLFLLPGNV Trigger: TACATTGCCAGGGAGCAAGAAGAGAGGGATGCAGAAACTGAACAAGGACCCACACATGGGCATGGCTGGTTGCATGAAAAGCAAATCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
||
| CDS TCA 72 bp | GTGGTAGCTACCACATCTTCAATGAAATCTGAGTCCTaGAAACCAGAAGAGGTAACAGTTGGCTGGGCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: VVATTSSMKSES*KPEEVTVGWAR Trigger: CCGAGCCCAGCCAACTGTTACCTCTTCTGGTTTTCAGGACTCAGATTTCATTGAAGATGTGGTAGCTACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
||
| CDS CCA 72 bp | ACAGGGGAAATAGGCTTTCAGTATGGGGGCCTTACTTaGAGCAATCTTGCAGGTCTGGGTGACTATGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TGEIGFQYGGLT*SNLAGLGDYEE Trigger: TTCTTCATAGTCACCCAGACCTGCAAGATTGCTCCAAGTAAGGCCCCCATACTGAAAGCCTATTTCCCCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 ENSMUST00000125790.8 |
||
| CDS CCA 72 bp | TCAGAACAGGCTCCAGGTCTGGACTATCTGTCGATATaGCATGCACACAACCAATACAGGGGAAATAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SEQAPGLDYLSI*HAHNQYRGNRL Trigger: AAGCCTATTTCCCCTGTATTGGTTGTGTGCATGCCATATCGACAGATAGTCCAGACCTGGAGCCTGTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 ENSMUST00000125790.8 |
||
| CDS CCA 72 bp | AGAAAGGATGGTCATTCTCTGCATTTAGCTGTGCAATaGAATGACCAAGCACCTCCTTCAGCTCTGGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RKDGHSLHLAVQ*NDQAPPSALGC Trigger: ACAGCCCAGAGCTGAAGGAGGTGCTTGGTCATTCCATTGCACAGCTAAATGCAGAGAATGACCATCCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
||
| CDS CAA 90 bp | TTAATATCCATGAAGAGATTTCCTCTACATTCACCATCATCACCATaGGGAAGGGCCACGCAGTCTCCATGGAGGGAAGGAAAACGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LISMKRFPLHSPSSP*GRATQSPWREGKRS Trigger: GGAGCGTTTTCCTTCCCTCCATGGAGACTGCGTGGCCCTTCCCAATGGTGATGATGGTGAATGTAGAGGAAATCTCTTCATGGATATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
||
| CDS CAA 90 bp | TTTGGATCCTTCCAGCTAGCTGGCTTCCATGGGCGCCCAGGACATTaGGGGGAAGTTGCTTCTGGAAAATCAGATATCAGCTTAAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: FGSFQLAGFHGRPGH*GEVASGKSDISLNE Trigger: TTCATTTAAGCTGATATCTGATTTTCCAGAAGCAACTTCCCCCAAATGTCCTGGGCGCCCATGGAAGCCAGCTAGCTGGAAGGATCCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
||
| CDS CAA 90 bp | CTCATGTACACGTTAGCATTGCAGTCGAGACTTTGTCCAAGGTGCTaGATCTCACAATCTTCTGCCAGCTCTGTGTTACTTTCCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LMYTLALQSRLCPRC*ISQSSASSVLLSLE Trigger: CTCCAAGGAAAGTAACACAGAGCTGGCAGAAGATTGTGAGATCAAGCACCTTGGACAAAGTCTCGACTGCAATGCTAACGTGTACATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
||
| CDS TCA 72 bp | TGGTGGGGTGGTAGCTACCACATCTTCAATGAAATCTaGGTCCTGAAAACCAGAAGAGGTAACAGTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: WWGGSYHIFNEI*VLKTRRGNSWL Trigger: CAGCCAACTGTTACCTCTTCTGGTTTTCAGGACTCAGATTTCATTGAAGATGTGGTAGCTACCACCCCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023589.15 |
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| CDS CCA 72 bp | ATGTTCGATGGAGTGTTTCAGAACAGGCTCCAGGTCTaGACTATCTGTCGATATGGCATGCACACAACCAAT | + |
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Preference number: 6 (lower is better) Translates to: MFDGVFQNRLQV*TICRYGMHTTN Trigger: ATTGGTTGTGTGCATGCCATATCGACAGATAGTCCAGACCTGGAGCCTGTTCTGAAACACTCCATCGAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 ENSMUST00000125790.8 |
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| CDS CCA 72 bp | GGAGGCCTTCTTGCCATTTCAGTCATATCTAATGCTTaGCATTTCACAGTCGGGACGACTTTGTTCTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: GGLLAISVISNA*HFTVGTTLFSQ Trigger: TTGGGAGAACAAAGTCGTCCCGACTGTGAAATGCCAAGCATTAGATATGACTGAAATGGCAAGAAGGCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
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| CDS CCA 72 bp | ATCAGGGATCAAATCATCATGGGCCCCAGTGTCATATaGTGGGGTGGTAGCTACCACATCTTCAATGAAATC | + |
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Preference number: 6 (lower is better) Translates to: IRDQIIMGPSVI*WGGSYHIFNEI Trigger: GATTTCATTGAAGATGTGGTAGCTACCACCCCACCATATGACACTGGGGCCCATGATGATTTGATCCCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023589.15 ENSMUST00000089902.8 |
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| CDS CAA 72 bp | TTAGTGCCCTCGATCACTCGGTGCAACATATACTGGTaGCCACTTTTTACCCCAGGGTTAAACTGCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LVPSITRCNIYW*PLFTPGLNCFR Trigger: TCTGAAGCAGTTTAACCCTGGGGTAAAAAGTGGCAACCAGTATATGTTGCACCGAGTGATCGAGGGCACTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
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| CDS GCA 72 bp | TACACGTTAGCATTGCAGTCGAGACTTTGTCCAAGGTaGTTGATCTCACAATCTTCTGCCAGCTCTGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: YTLALQSRLCPR*LISQSSASSVL Trigger: TAACACAGAGCTGGCAGAAGATTGTGAGATCAAGCACCTTGGACAAAGTCTCGACTGCAATGCTAACGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
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| CDS CAA 90 bp | ATTTCAGTCATATCTAATGCTTGGCATTTCACAGTCGGGACGACTTaGTTCTCCCAAGGTCTCATGTACACGTTAGCATTGCAGTCGAGA | + |
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Preference number: 6 (lower is better) Translates to: ISVISNAWHFTVGTT*FSQGLMYTLALQSR Trigger: TCTCGACTGCAATGCTAACGTGTACATGAGACCTTGGGAGAACAAAGTCGTCCCGACTGTGAAATGCCAAGCATTAGATATGACTGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
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| CDS TCA 72 bp | CACGCAGTCTCCATGGAGGGAAGGAAAACGCTCCTTTaGACAATTTGTTTGCACAATTGTGTAGGTAATGTC | + |
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Preference number: 6 (lower is better) Translates to: HAVSMEGRKTLL*TICLHNCVGNV Trigger: GACATTACCTACACAATTGTGCAAACAAATTGTTCAAAGGAGCGTTTTCCTTCCCTCCATGGAGACTGCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
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| CDS CAA 72 bp | ATATCTAATGCTTGGCATTTCACAGTCGGGACGACTTaGTTCTCCCAAGGTCTCATGTACACGTTAGCATTG | + |
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Preference number: 6 (lower is better) Translates to: ISNAWHFTVGTT*FSQGLMYTLAL Trigger: CAATGCTAACGTGTACATGAGACCTTGGGAGAACAAAGTCGTCCCGACTGTGAAATGCCAAGCATTAGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 |
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| CDS TCA 72 bp | TGGTGGGGTGGTAGCTACCACATCTTCAATGAAATCTaGGTCAGTTCTTCCTTCTTTTGTTTCTTGTACTGT | + |
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Preference number: 6 (lower is better) Translates to: WWGGSYHIFNEI*VSSSFFCFLYC Trigger: ACAGTACAAGAAACAAAAGAAGGAAGAACTGACTCAGATTTCATTGAAGATGTGGTAGCTACCACCCCACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089902.8 |
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| CDS TCA 72 bp | GCACTTTTTACTTTTCTGAGAGTAAAGAGGTGGCTGTaGTCTGTGTTGTTGTTGAAATGTTCGATGGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: ALFTFLRVKRWL*SVLLLKCSMEC Trigger: ACACTCCATCGAACATTTCAACAACAACACAGATCACAGCCACCTCTTTACTCTCAGAAAAGTAAAAAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023589.15 ENSMUST00000039492.14 ENSMUST00000089902.8 ENSMUST00000125790.8 |
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