Pregenerated sensors for KMT5A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049327Ensembl transcript IDs: ENSMUST00000059580.11, ENSMUST00000199798.5
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACAGCATCTTCATGGGAGACCAGGAGCTCTGCCTTGGCAGCAGGTaGAGAACTTCCCATGCAGCAGAATTGGGGTTAGGGAGGGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: DSIFMGDQELCLGSR*RTSHAAELGLGRGC Trigger: ACACCCCCTCCCTAACCCCAATTCTGCTGCATGGGAAGTTCTCCACCTGCTGCCAAGGCAGAGCTCCTGGTCTCCCATGAAGATGCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR GCA 90 bp | AATGGTGAGTCCTCCCCAGGGAGGGAGAAGGAAGCCACCTACTCTTaGTCTCACAGGTCAAAACCGAAGCATCATCCTGGTTCTCTGCCG | + |
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Preference number: 1 (lower is better) Translates to: NGESSPGREKEATYS*SHRSKPKHHPGSLP Trigger: CGGCAGAGAACCAGGATGATGCTTCGGTTTTGACCTGTGAGAGCAAGAGTAGGTGGCTTCCTTCTCCCTCCCTGGGGAGGACTCACCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR-3UTR CCA 90 bp | AGCCGTAAGCCTGTGGAAGAGGTCTGTTCCTGGCCGGGCCTCCCAGCCCCGGGCGGTGTGGGGGAGTCCTaGCTTTCATCTTGGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SRKPVEEVCSWPGLPAPGGVGES*LSSWAE Trigger: CTCTGCCCAAGATGAAAGCCAGGACTCCCCCACACC...GCCCGGGGCTGGGAGGCCCGGCCAGGAACAGACCTCTTCCACAGGCTTACGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| 3UTR-3UTR CCA 90 bp | AGCCGTAAGCCTGTGGAAGAGGTCTGTTCCTGGCCGGGCCTCCCAGCCCCGGGCACCGAAGCATCATCCTaGTTCTCTGCCGGCTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SRKPVEEVCSWPGLPAPGTEASS*FSAGCQ Trigger: CTGGCAGCCGGCAGAGAACCAGGATGATGCTTCGGT...GCCCGGGGCTGGGAGGCCCGGCCAGGAACAGACCTCTTCCACAGGCTTACGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR-3UTR CCA 90 bp | AGCCGTAAGCCTGTGGAAGAGGTCTGTTCCTGGCCGGGCCTCCCAGCCCCGGGCTGCCTTGGCAGCAGGTaGAGAACTTCCCATGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: SRKPVEEVCSWPGLPAPGCLGSR*RTSHAA Trigger: TGCTGCATGGGAAGTTCTCCACCTGCTGCCAAGGCA...GCCCGGGGCTGGGAGGCCCGGCCAGGAACAGACCTCTTCCACAGGCTTACGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR-3UTR CCA 90 bp | TCAGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCCCGCCTCGCCTGTCCTTGGACGTaGGGTGTGGGGGAGTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SGDLPFLSRRTVLFPARLACPWT*GVGESW Trigger: CCAGGACTCCCCCACACCCCACGTCCAAGGACAGGC...GAGGCGGGCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGGTCTGTTCCTGGCCGGGCCTCCCAGCCCCGGGCTCAGTAAGCTTTGGAGAGGCCCGCCTCTAATCTaGCTGTCCACCCTGATGCTT | + |
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Preference number: 2 (lower is better) Translates to: RGLFLAGPPSPGLSKLWRGPPLI*LSTLML Trigger: AAGCATCAGGGTGGACAGTCAGATTAGAGGCGGGCC...TCTCCAAAGCTTACTGAGCCCGGGGCTGGGAGGCCCGGCCAGGAACAGACCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGGTCTGTTCCTGGCCGGGCCTCCCAGCCCCGGGCTCAGTAAGCTTTGGAGATCTGACTGTCCACCCTaGTGCTTCAAGGTGCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: RGLFLAGPPSPGLSKLWRSDCPP*CFKVPG Trigger: TCCAGGCACCTTGAAGCATCAGGGTGGACAGTCAGA...TCTCCAAAGCTTACTGAGCCCGGGGCTGGGAGGCCCGGCCAGGAACAGACCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| 3UTR-3UTR TCA 90 bp | AGCCGTAAGCCTGTGGAAGAGGTCTGTTCCTGGCCGGGCCTCCCAGCCCCGGGCTTCCCACACTTACTGTaGTTGATGAGTCTCCCTAGG | + |
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Preference number: 2 (lower is better) Translates to: SRKPVEEVCSWPGLPAPGFPHLL*LMSLPR Trigger: CCTAGGGAGACTCATCAATCACAGTAAGTGTGGGAA...GCCCGGGGCTGGGAGGCCCGGCCAGGAACAGACCTCTTCCACAGGCTTACGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199798.5 |
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| 3UTR-3UTR GCA 90 bp | TCAGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCCCGCCTCGGAGACCAGGAGCTCTaGCTTGGCAGCAGGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SGDLPFLSRRTVLFPARLGDQEL*LGSRWR Trigger: TCTCCACCTGCTGCCAAGGCAGAGCTCCTGGTCTCC...GAGGCGGGCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR-3UTR TCA 90 bp | AGAGGTCTGTTCCTGGCCGGGCCTCCCAGCCCCGGGCTCAGTAAGCTTTGGAGAGAGACCTGCCCTTCTTaGGCAGGAGAACAGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: RGLFLAGPPSPGLSKLWRETCPS*AGEQCF Trigger: AAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTC...TCTCCAAAGCTTACTGAGCCCGGGGCTGGGAGGCCCGGCCAGGAACAGACCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| 3UTR-3UTR GCA 90 bp | AGCCGTAAGCCTGTGGAAGAGGTCTGTTCCTGGCCGGGCCTCCCAGCCCCGGGCCTCTCCTGGTGTCTTTaGTCTTCTGTTCATCTGACT | + |
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Preference number: 2 (lower is better) Translates to: SRKPVEEVCSWPGLPAPGLSWCL*SSVHLT Trigger: AGTCAGATGAACAGAAGAGCAAAGACACCAGGAGAG...GCCCGGGGCTGGGAGGCCCGGCCAGGAACAGACCTCTTCCACAGGCTTACGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199798.5 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGGAGGGAGAAGGAAGCCACCTACTCTTGCTCTCACAGGTCAAAACCGAAGCCTGTCCTTGGACGTaGGGTGTGGGGGAGTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: PREGEGSHLLLLSQVKTEACPWT*GVGESW Trigger: CCAGGACTCCCCCACACCCCACGTCCAAGGACAGGC...TTCGGTTTTGACCTGTGAGAGCAAGAGTAGGTGGCTTCCTTCTCCCTCCCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR-3UTR TCA 90 bp | TCAGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCCCGCCTCTCTGACTGTCCACCCTaGTGCTTCAAGGTGCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: SGDLPFLSRRTVLFPARLSDCPP*CFKVPG Trigger: TCCAGGCACCTTGAAGCATCAGGGTGGACAGTCAGA...GAGGCGGGCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| 3UTR-3UTR GCA 90 bp | AGAGGTCTGTTCCTGGCCGGGCCTCCCAGCCCCGGGCTCAGTAAGCTTTGGAGAGAAGCCACCTACTCTTaGTCTCACAGGTCAAAACCG | + |
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Preference number: 2 (lower is better) Translates to: RGLFLAGPPSPGLSKLWREATYS*SHRSKP Trigger: CGGTTTTGACCTGTGAGAGCAAGAGTAGGTGGCTTC...TCTCCAAAGCTTACTGAGCCCGGGGCTGGGAGGCCCGGCCAGGAACAGACCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTTTCAGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCGGGCACTTTGTCCTTTaGAGGAGGCAGGGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: CSFRRPALLEQENSAFPGGHFVL*RRQGGR Trigger: CCTGCCACCCTGCCTCCTTCAAAGGACAAAGTGCCC...GCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCTGAAACTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| 3UTR-3UTR TCA 90 bp | TCAGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCCCGCCTCGAGACCTGCCCTTCTTaGGCAGGAGAACAGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: SGDLPFLSRRTVLFPARLETCPS*AGEQCF Trigger: AAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTC...GAGGCGGGCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTTTCAGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCCTTATACCTGGCTCCTaGACCCCAGGCCCCTGGACT | + |
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Preference number: 2 (lower is better) Translates to: CSFRRPALLEQENSAFPGLIPGS*TPGPWT Trigger: AGTCCAGGGGCCTGGGGTTCAGGAGCCAGGTATAAG...GCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCTGAAACTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTTTCAGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCGGCCCGCCTCTAATCTaGCTGTCCACCCTGATGCTT | + |
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Preference number: 2 (lower is better) Translates to: CSFRRPALLEQENSAFPGGPPLI*LSTLML Trigger: AAGCATCAGGGTGGACAGTCAGATTAGAGGCGGGCC...GCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCTGAAACTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTTTCAGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCATCATCCTGGTTCTCTaGCGGCTGCCAGGTACCCTA | + |
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Preference number: 2 (lower is better) Translates to: CSFRRPALLEQENSAFPGIILVL*RLPGTL Trigger: TAGGGTACCTGGCAGCCGGCAGAGAACCAGGATGAT...GCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCTGAAACTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR-3UTR CCA 90 bp | AGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCCCGCCTCTAATGCTTCAAGGTGCCTaGAAAAGCCGTAAGCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: RRPALLEQENSAFPGPPLMLQGA*KSRKPV Trigger: CACAGGCTTACGGCTTTTCCAGGCACCTTGAAGCAT...TAGAGGCGGGCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGGTGAATGGTGAGTCCTCCCCAGGGAGGGAGAAGGAAGCCACCTACTCTGTGGAGAACTTCCCATaGAGCAGAATTGGGGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: LKVNGESSPGREKEATYSVENFP*SRIGVR Trigger: CCTAACCCCAATTCTGCTGCATGGGAAGTTCTCCAC...AGAGTAGGTGGCTTCCTTCTCCCTCCCTGGGGAGGACTCACCATTCACCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR-3UTR GCA 90 bp | TCAGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCCCGCCTCGGCTTGCTTAGCGACTaGTACATTGGTAGAATCACA | + |
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Preference number: 2 (lower is better) Translates to: SGDLPFLSRRTVLFPARLGLLSD*YIGRIT Trigger: TGTGATTCTACCAATGTAGCAGTCGCTAAGCAAGCC...GAGGCGGGCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199798.5 |
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| 3UTR-3UTR CCA 90 bp | TTATCTCACAGTTACACCCTCCTGTCGGATCCTCCTCCAAGTCTGACCACTGACATGCTTCAAGGTGCCTaGAAAAGCCGTAAGCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LSHSYTLLSDPPPSLTTDMLQGA*KSRKPV Trigger: CACAGGCTTACGGCTTTTCCAGGCACCTTGAAGCAT...GTCAGTGGTCAGACTTGGAGGAGGATCCGACAGGAGGGTGTAACTGTGAGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR CCA 72 bp | GGGGGCAGCGCCCTCACACCGGCCTGTCCTTGGACGTaGGGTGTGGGGGAGTCCTGGCTTTCATCTTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: GGSALTPACPWT*GVGESWLSSWA Trigger: TGCCCAAGATGAAAGCCAGGACTCCCCCACACCCCACGTCCAAGGACAGGCCGGTGTGAGGGCGCTGCCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| 3UTR-3UTR CAA 90 bp | AGCCGTAAGCCTGTGGAAGAGGTCTGTTCCTGGCCGGGCCTCCCAGCCCCGGGCGGAGACCTGCCCTTCTaGAGCAGGAGAACAGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: SRKPVEEVCSWPGLPAPGGDLPF*SRRTVL Trigger: AAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCC...GCCCGGGGCTGGGAGGCCCGGCCAGGAACAGACCTCTTCCACAGGCTTACGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| 3UTR-3UTR CAA 90 bp | AGAGGTCTGTTCCTGGCCGGGCCTCCCAGCCCCGGGCTCAGTAAGCTTTGGAGAGTCCTGGCTTTCATCTaGGGCAGAGCCCGGCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: RGLFLAGPPSPGLSKLWRVLAFI*GRARLP Trigger: AGGAAGCCGGGCTCTGCCCAAGATGAAAGCCAGGAC...TCTCCAAAGCTTACTGAGCCCGGGGCTGGGAGGCCCGGCCAGGAACAGACCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| 3UTR TCA 72 bp | ACAGTTACACCCTCCTGTCGGATCCTCCTCCAAGTCTaGCCACTGACTGGGCTAGCAGAGGGTGCGGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: TVTPSCRILLQV*PLTGLAEGAGE Trigger: CTCCCCCGCACCCTCTGCTAGCCCAGTCAGTGGTCAGACTTGGAGGAGGATCCGACAGGAGGGTGTAACTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR-3UTR CAA 90 bp | AGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCCCGCCTCTAGTCCTGGCTTTCATCTaGGGCAGAGCCCGGCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: RRPALLEQENSAFPGPPLVLAFI*GRARLP Trigger: AGGAAGCCGGGCTCTGCCCAAGATGAAAGCCAGGAC...TAGAGGCGGGCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| 3UTR-3UTR CAA 90 bp | AGAGGTCTGTTCCTGGCCGGGCCTCCCAGCCCCGGGCTCAGTAAGCTTTGGAGATTAGCGACTGCTACATaGGTAGAATCACATGATGGG | + |
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Preference number: 3 (lower is better) Translates to: RGLFLAGPPSPGLSKLWRLATAT*VESHDG Trigger: CCCATCATGTGATTCTACCAATGTAGCAGTCGCTAA...TCTCCAAAGCTTACTGAGCCCGGGGCTGGGAGGCCCGGCCAGGAACAGACCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199798.5 |
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| 3UTR GCA 72 bp | ACAGCTGACAGCATCTTCATGGGAGACCAGGAGCTCTaGCTTGGCAGCAGGTGGAGAACTTCCCATGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: TADSIFMGDQEL*LGSRWRTSHAA Trigger: TGCTGCATGGGAAGTTCTCCACCTGCTGCCAAGGCAGAGCTCCTGGTCTCCCATGAAGATGCTGTCAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR CCA 72 bp | TTCATGGGAGACCAGGAGCTCTGCCTTGGCAGCAGGTaGAGAACTTCCCATGCAGCAGAATTGGGGTTAGGG | + |
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Preference number: 3 (lower is better) Translates to: FMGDQELCLGSR*RTSHAAELGLG Trigger: CCCTAACCCCAATTCTGCTGCATGGGAAGTTCTCCACCTGCTGCCAAGGCAGAGCTCCTGGTCTCCCATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR-3UTR CAA 90 bp | AGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCCCGCCTCTACCTCTCCTGGTGTCTTaGCTCTTCTGTTCATCTGAC | + |
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Preference number: 3 (lower is better) Translates to: RRPALLEQENSAFPGPPLPLLVS*LFCSSD Trigger: GTCAGATGAACAGAAGAGCAAAGACACCAGGAGAGG...TAGAGGCGGGCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199798.5 |
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| 3UTR GCA 72 bp | TCCTCCCCAGGGAGGGAGAAGGAAGCCACCTACTCTTaGTCTCACAGGTCAAAACCGAAGCATCATCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: SSPGREKEATYS*SHRSKPKHHPG Trigger: ACCAGGATGATGCTTCGGTTTTGACCTGTGAGAGCAAGAGTAGGTGGCTTCCTTCTCCCTCCCTGGGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| CDS-3UTR CCA 90 bp | AGCCGTAAGCCTGTGGAAGAGGTCTGTTCCTGGCCGGGCCTCCCAGCCCCGGGCGTTCTCTTCCTGAAGTaGAGAGCGCATTGCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: SRKPVEEVCSWPGLPAPGVLFLK*RAHCRA Trigger: TGCTCTGCAATGCGCTCTCCACTTCAGGAAGAGAAC...GCCCGGGGCTGGGAGGCCCGGCCAGGAACAGACCTCTTCCACAGGCTTACGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| CDS-3UTR TCA 90 bp | AGCCGTAAGCCTGTGGAAGAGGTCTGTTCCTGGCCGGGCCTCCCAGCCCCGGGCGTAGGCATAGATCTTTaGCTGCCCAGCAAACACGTT | + |
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Preference number: 4 (lower is better) Translates to: SRKPVEEVCSWPGLPAPGVGIDL*LPSKHV Trigger: AACGTGTTTGCTGGGCAGTCAAAGATCTATGCCTAC...GCCCGGGGCTGGGAGGCCCGGCCAGGAACAGACCTCTTCCACAGGCTTACGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| CDS-3UTR GCA 90 bp | AGAGGTCTGTTCCTGGCCGGGCCTCCCAGCCCCGGGCTCAGTAAGCTTTGGAGAGGCTTGCTTAGCGACTaGTACATTGGTAGAATCACA | + |
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Preference number: 4 (lower is better) Translates to: RGLFLAGPPSPGLSKLWRGLLSD*YIGRIT Trigger: TGTGATTCTACCAATGTAGCAGTCGCTAAGCAAGCC...TCTCCAAAGCTTACTGAGCCCGGGGCTGGGAGGCCCGGCCAGGAACAGACCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR CAA 72 bp | GTCCTCCCCAGGGAGGGAGAAGGAAGCCACCTACTCTaGCTCTCACAGGTCAAAACCGAAGCATCATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VLPREGEGSHLL*LSQVKTEASSW Trigger: CCAGGATGATGCTTCGGTTTTGACCTGTGAGAGCAAGAGTAGGTGGCTTCCTTCTCCCTCCCTGGGGAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| CDS-3UTR TCA 90 bp | TCAGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCCCGCCTCTTCCCACACTTACTGTaGTTGATGAGTCTCCCTAGG | + |
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Preference number: 4 (lower is better) Translates to: SGDLPFLSRRTVLFPARLFPHLL*LMSLPR Trigger: CCTAGGGAGACTCATCAATCACAGTAAGTGTGGGAA...GAGGCGGGCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| 3UTR CAA 72 bp | CTGACAGCATCTTCATGGGAGACCAGGAGCTCTGCCTaGGCAGCAGGTGGAGAACTTCCCATGCAGCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: LTASSWETRSSA*AAGGELPMQQN Trigger: ATTCTGCTGCATGGGAAGTTCTCCACCTGCTGCCAAGGCAGAGCTCCTGGTCTCCCATGAAGATGCTGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| CDS-3UTR TCA 90 bp | TGCAGTTTCAGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCGGGCATTTGACCTCATaGTGGGCAACCGAGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: CSFRRPALLEQENSAFPGGHLTS*WATEFS Trigger: AGAGAACTCGGTTGCCCATCATGAGGTCAAATGCCC...GCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCTGAAACTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| CDS-3UTR GCA 90 bp | TCAGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCCCGCCTCCTCTCCTGGTGTCTTTaGTCTTCTGTTCATCTGACT | + |
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Preference number: 4 (lower is better) Translates to: SGDLPFLSRRTVLFPARLLSWCL*SSVHLT Trigger: AGTCAGATGAACAGAAGAGCAAAGACACCAGGAGAG...GAGGCGGGCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| CDS-3UTR CCA 90 bp | CCCAGGGAGGGAGAAGGAAGCCACCTACTCTTGCTCTCACAGGTCAAAACCGAAGTTCTCTTCCTGAAGTaGAGAGCGCATTGCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: PREGEGSHLLLLSQVKTEVLFLK*RAHCRA Trigger: TGCTCTGCAATGCGCTCTCCACTTCAGGAAGAGAAC...TTCGGTTTTGACCTGTGAGAGCAAGAGTAGGTGGCTTCCTTCTCCCTCCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| CDS-3UTR TCA 90 bp | CCCAGGGAGGGAGAAGGAAGCCACCTACTCTTGCTCTCACAGGTCAAAACCGAAGTAGGCATAGATCTTTaGCTGCCCAGCAAACACGTT | + |
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Preference number: 4 (lower is better) Translates to: PREGEGSHLLLLSQVKTEVGIDL*LPSKHV Trigger: AACGTGTTTGCTGGGCAGTCAAAGATCTATGCCTAC...TTCGGTTTTGACCTGTGAGAGCAAGAGTAGGTGGCTTCCTTCTCCCTCCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| CDS-3UTR CAA 90 bp | AGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCCCGCCTCTATTAGCGACTGCTACATaGGTAGAATCACATGATGGG | + |
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Preference number: 5 (lower is better) Translates to: RRPALLEQENSAFPGPPLLATAT*VESHDG Trigger: CCCATCATGTGATTCTACCAATGTAGCAGTCGCTAA...TAGAGGCGGGCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| CDS-3UTR CAA 90 bp | TGCAGTTTCAGGAGACCTGCCCTTCTTGAGCAGGAGAACAGTGCTTTTCCCGGCTGTAGGCATAGATCTTaGACTGCCCAGCAAACACGT | + |
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Preference number: 5 (lower is better) Translates to: CSFRRPALLEQENSAFPGCRHRS*TAQQTR Trigger: ACGTGTTTGCTGGGCAGTCAAAGATCTATGCCTACA...GCCGGGAAAAGCACTGTTCTCCTGCTCAAGAAGGGCAGGTCTCCTGAAACTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059580.11 ENSMUST00000199798.5 |
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| CDS-3UTR CAA 90 bp | TTATCTCACAGTTACACCCTCCTGTCGGATCCTCCTCCAAGTCTGACCACTGACCCTCTCCTGGTGTCTTaGCTCTTCTGTTCATCTGAC | + |
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Preference number: 5 (lower is better) Translates to: LSHSYTLLSDPPPSLTTDPLLVS*LFCSSD Trigger: GTCAGATGAACAGAAGAGCAAAGACACCAGGAGAGG...GTCAGTGGTCAGACTTGGAGGAGGATCCGACAGGAGGGTGTAACTGTGAGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| CDS-3UTR CAA 90 bp | TTATCTCACAGTTACACCCTCCTGTCGGATCCTCCTCCAAGTCTGACCACTGACTGTAGGCATAGATCTTaGACTGCCCAGCAAACACGT | + |
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Preference number: 5 (lower is better) Translates to: LSHSYTLLSDPPPSLTTDCRHRS*TAQQTR Trigger: ACGTGTTTGCTGGGCAGTCAAAGATCTATGCCTACA...GTCAGTGGTCAGACTTGGAGGAGGATCCGACAGGAGGGTGTAACTGTGAGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| CDS TCA 72 bp | AGAGCACTTGTTCGGACTCATGTAGGCATAGATCTTTaGCTGCCCAGCAAACACGTTCTCCCCGTCGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: RALVRTHVGIDL*LPSKHVLPVAA Trigger: CGCAGCGACGGGGAGAACGTGTTTGCTGGGCAGTCAAAGATCTATGCCTACATGAGTCCGAACAAGTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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| CDS CAA 72 bp | CAGAGCACTTGTTCGGACTCATGTAGGCATAGATCTTaGACTGCCCAGCAAACACGTTCTCCCCGTCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QSTCSDSCRHRS*TAQQTRSPRRC Trigger: GCAGCGACGGGGAGAACGTGTTTGCTGGGCAGTCAAAGATCTATGCCTACATGAGTCCGAACAAGTGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059580.11 |
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